BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G04080.1 Length=1663 Score E Sequences producing significant alignments: (Bits) Value Ahg319239 jgi|Araly1|319239|fgenesh1_pm.C_scaffold_3002255 1757 0.0 Ahg930722 jgi|Araly1|930722|scaffold_303179.1 1718 0.0 Ahg480060 jgi|Araly1|480060|fgenesh2_kg.3__2761__AT2G04040.1 1570 0.0 Ahg342751 jgi|Araly1|342751|fgenesh1_pg.C_scaffold_3002514 625 4e-178 > Ahg319239 jgi|Araly1|319239|fgenesh1_pm.C_scaffold_3002255 Length=1431 Score = 1757 bits (951), Expect = 0.0 Identities = 1280/1440 (89%), Gaps = 18/1440 (1%) Strand=Plus/Plus Query 95 ATGGAAGAGCCATTTCTTCC-GAGAGACGAGCAGTTAGTCTCTTGTAAATCCACATGGCA 153 |||||||||||||||||||| || ||| |||||| ||||| | |||||| |||||||||| Sbjct 1 ATGGAAGAGCCATTTCTTCCGGA-AGATGAGCAGCTAGTCCCCTGTAAAGCCACATGGCA 59 Query 154 AAGTGGTCAGGTCACCGTCGAGCTGAAGAAAGTGAGCCGCTTGGCCGCTCCTATGGCCAC 213 || ||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 60 AAATGGTCAGCTCAACGTCGAGCTGAAGAAAGTGAGCCGCTTGGCCGCTCCAATGGCCAC 119 Query 214 CGTAACCATAGCTCAGTACTTATTGCCTGTCATCTCAGTCATGGTCGCCGGCCACATCGG 273 ||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct 120 CGTGACCATTGCTCAGTACTTATTGCCTGTCATCTCAGTCATGGTCGCCGGTCACAACGG 179 Query 274 CGAGTTGGAGCTCG-CCGGTGTCGCGCTTGCCACGTCTTTCACAAACGTTTCCGGCTTCA 332 |||| | |||| | |||||||||| |||||||| || ||||||||||| ||||| |||| Sbjct 180 CGAGCTCCAGCT-GTCCGGTGTCGCTCTTGCCACATCCTTCACAAACGTCTCCGGTTTCA 238 Query 333 GCATAATGTTTGGGTTAGTTGGTGCATTGGAAACTCTTTGTGGCCAAGCCTATGGAG-CA 391 |||| |||| ||||||||| |||||| | ||||| |||||||||||||| ||||||| || Sbjct 239 GCATTATGTATGGGTTAGTGGGTGCACTAGAAACACTTTGTGGCCAAGCTTATGGAGCCA 298 Query 392 GAACAATACGAAAAAATCGGAACCTATACATACTCTGCAATGGCTTCCAACATACCAATT 451 |||||||||||||| ||||||||||||||||||||||||| || || ||||| || ||| Sbjct 299 -AACAATACGAAAAACTCGGAACCTATACATACTCTGCAATTGCCTCTAACATCCCTATT 357 Query 452 TGTTTCATCATATCAATTCTATGGATTTACATCGAAAAGCTCTTGATCACTCTCGGGCAA 511 ||| || ||||||||||||| |||||||||||||||||||| || ||| ||||||| ||| Sbjct 358 TGTGTCCTCATATCAATTCTCTGGATTTACATCGAAAAGCTATTAATCTCTCTCGGTCAA 417 Query 512 GAGCCTGACATCTCTAGAGTCGCTGGCTCCTACTCATTGTGGCTCGTACCGGCTTTGTTT 571 || ||||||||||| |||||||||||||| ||| | ||||||||| |||||||||||||| Sbjct 418 GACCCTGACATCTCCAGAGTCGCTGGCTCATACGCCTTGTGGCTCATACCGGCTTTGTTT 477 Query 572 GCCCATGCTATTTTCTTACCACTGACTCGGTTTCTGCTAGCACAAGGGTTGGTTATTTCC 631 || ||||| ||| || |||||||||| |||||||| |||||||||||||||||| || || Sbjct 478 GCTCATGCGATTGTCATACCACTGACCCGGTTTCTACTAGCACAAGGGTTGGTTCTTCCC 537 Query 632 CTGCTATACTCTGCCA-TGACCACCCTTTTGTTCCATATTGCGGTTTGCTGGACTTTGGT 690 ||||| ||||||| || ||||||||||||||||||| || |||||||||||||||||||| Sbjct 538 CTGCTCTACTCTG-CACTGACCACCCTTTTGTTCCACATGGCGGTTTGCTGGACTTTGGT 596 Query 691 TTTCGCGCTTGGTCTTGGAAGCAATGGAGCTGCTATTGCTATTAGTTTGTCTTTCTGGTT 750 || |||||||||||| ||||||||||||||||| | ||||||||| ||||||||||||| Sbjct 597 TTCCGCGCTTGGTCTGGGAAGCAATGGAGCTGCCCTAGCTATTAGTGTGTCTTTCTGGTT 656 Query 751 TTACGCTGTGATACTCTCATGTCATGTGAGATTTTTCAGCTCTTGCGAGAAGACTCGCGG 810 |||||||||||| ||||||||| ||||||||| | ||||||||| |||||||||||||| Sbjct 657 TTACGCTGTGATTCTCTCATGTTATGTGAGATCCTCCAGCTCTTGTGAGAAGACTCGCGG 716 Query 811 ATTTGTAT-CAAATGATTTTATGTCTAGTATCAAGCAGTACTTCCAGTACGGAGTCCCAT 869 |||||||| | | ||| | ||||| | ||||||||| |||||| ||||||||||||| Sbjct 717 ATTTGTATCCGGA-GATATCGTGTCTTCTGTCAAGCAGTTCTTCCATTACGGAGTCCCAT 775 Query 870 CCGCTGGATTGATTTGCTTAGAATGGTGGCTGTTTGAGCTACTCATACTCTGCTCAGGTC 929 | || | | || ||||| ||||||||||||| ||||||||||| |||||||| ||||||| Sbjct 776 CAGCCGCAATGCTTTGCCTAGAATGGTGGCTATTTGAGCTACTTATACTCTGTTCAGGTC 835 Query 930 TTCTCCCAAACCCAAAACTCGAGACATCTGTTCTTTCGATTTGTCTTACAATAGGAACTT 989 ||||||| ||||||||||||||||| ||||||||||| ||||||||||||| || ||||| Sbjct 836 TTCTCCCGAACCCAAAACTCGAGACCTCTGTTCTTTCTATTTGTCTTACAACAGCAACTT 895 Query 990 TACACTATGTGATTCCA-TCTGGAGTCGCGGCGGCTGTGAGCACACGAGTGTCAAACAAA 1048 | ||||||||||||||| | ||||||||| |||||||| |||||||| |||||||||||| Sbjct 896 TGCACTATGTGATTCCAGT-TGGAGTCGCAGCGGCTGTTAGCACACGTGTGTCAAACAAA 954 Query 1049 TTGGGAGCTGGAAATCCTCAAGTTGCTAGGGTTTCCGTATTGGCAGGGCTTTGTCTCTGG 1108 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 955 TTGGGAGCTGGAAATCCTCAAGTTGCTAGGGTTTCAGTATTGGCAGGGCTTTGTCTCTGG 1014 Query 1109 CTTGTAGAGTCAGCTTTCTTTAGCACACTTCTCTTCACCTGCCGAAACATCATAGGCTAC 1168 || ||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| Sbjct 1015 CTGGTAGAGTCAGCTTTCTTTAGCACACTTCTCTTCACATGCAGGAACATCATAGGCTAC 1074 Query 1169 ACATTCAGCAACAGCAAAGAAGTTGTTGACTATGTTGCTGACATATCTCCTTTGCTCTGT 1228 ||||||||||||||||||||||||| |||||||| |||||| || |||||||||||||| Sbjct 1075 GCATTCAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTGACCTAACTCCTTTGCTCTGT 1134 Query 1229 CTCTCCTTCATCCTCGACGGATTAACGGCAGTTCTAAATGGAGTGGCTAGGGG-ATGTGG 1287 |||||||| | ||||||||||| || |||||||| ||||| || |||||||| | |||| Sbjct 1135 CTCTCCTTTGTTCTCGACGGATTTACCGCAGTTCTTAATGGGGTTGCTAGGGGCA-GTGG 1193 Query 1288 GTGGCAACACATTGGAGCTTTGATCAACGTGGTGGCTTATTATCTTGTAGGAGCTCCTGT 1347 ||||| |||||||||||||||| ||| ||| | ||||||||| | ||||| || || || Sbjct 1194 TTGGCAGCACATTGGAGCTTTGAACAATGTGTTAGCTTATTATATCGTAGGTGCCCCGGT 1253 Query 1348 TGGAGTTTACTTAGCTTTCAGTCGTGAGTGGAATGGAAAAGGACTCTGGTGCGGTGTTAT 1407 ||||||||||||||||||||||||||||| ||| ||||||||||| ||||| |||||| | Sbjct 1254 TGGAGTTTACTTAGCTTTCAGTCGTGAGTTGAACGGAAAAGGACTTTGGTGTGGTGTTGT 1313 Query 1408 GGTTGGATCCGCGGTGCAAGCCACTT-TACTGGCTATCGTCACA-GCCTCCATGAACTGG 1465 |||||||||||| |||||||||| || ||||| || |||||||| | ||||| || ||| Sbjct 1314 GGTTGGATCCGCTGTGCAAGCCA-TTATACTGTCTTTCGTCACATGT-TCCATAAATTGG 1371 Query 1466 AAGGAACAGGCTGAGAAAGCAAGGAAGAGAATAATCTCTACTGAAAATGGATTGGTTTAA 1525 ||||||||||||||||| || ||||||||||||||||| |||||||||||||||| |||| Sbjct 1372 AAGGAACAGGCTGAGAAGGCTAGGAAGAGAATAATCTCAACTGAAAATGGATTGGCTTAA 1431 > Ahg930722 jgi|Araly1|930722|scaffold_303179.1 Length=1471 Score = 1718 bits (930), Expect = 0.0 Identities = 1295/1472 (88%), Gaps = 22/1472 (1%) Strand=Plus/Plus Query 85 GAAGACGACAATGGAAGAGCCATTTCTTCCG-AGAGACGAGC-AGTTAGT-CTCTTGTAA 141 |||||| |||||||||||||||||||||| | | ||| |||| | || | | | ||||| Sbjct 11 GAAGACAACAATGGAAGAGCCATTTCTTCTGCA-AGATGAGCAACTT--TCCCCCTGTAA 67 Query 142 ATCCACATGGCAAAGTGGTCAGGTCACCGTCGAGCTGAAGAAAGTGAGCCGCTTGGCCGC 201 | |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 68 AGCCACATGGAAAAGTGGTCAGGTTACCGTCGAGCTGAAGAAAGTGAGCAGCTTGGCCGC 127 Query 202 TCCTATGGCCACCGTAACCATAGCTCAGTACTTATTGCCTGTCATCTCAGTCATGGTCGC 261 |||||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 128 TCCTATGGCCGCCGTGACCATTGCTCAGTACTTATTGCCTGTCATTTCAGTCATGGTCGC 187 Query 262 CGGCCAC-ATCGGCGAGTTGGAGCTCGCCGGTGTCGCGCTTGCCACGTCTTTCACAAACG 320 |||||| || || ||| | ||||| |||| ||||| ||||| || || |||||||||| Sbjct 188 TGGCCACAAT-GGTGAGCTCCAGCTCTCCGGCGTCGCTCTTGCAACCTCCTTCACAAACG 246 Query 321 TTTCCGGCTTCAGCATAATGTTTGGGTTAGTTGGTGCATTGGAAACTCTTTGTGGCCAAG 380 ||||||| ||||| || |||||||||||| ||||| | ||||||||||||||||||| Sbjct 247 TTTCCGGGTTCAGTATTTTGTTTGGGTTAGCGGGTGCCCTAGAAACTCTTTGTGGCCAAG 306 Query 381 CCTATGGAG-CAGAACAATACGAAAAAATCGGAACCTATACATACTCTGCAATGGCT-TC 438 | ||||||| || ||||||||||||||||||||||||| ||||||||||||| || | || Sbjct 307 CTTATGGAGCCA-AACAATACGAAAAAATCGGAACCTACACATACTCTGCAACGG-TCTC 364 Query 439 CAACATACCAATTTGTTTCATCATATCAATTCTATGGATTTACATCGAAAAGCTCTTGAT 498 ||||| || |||||| || ||||||||||||||||||||||||||||||||||||| || Sbjct 365 TAACATCCCTATTTGTGTCCTCATATCAATTCTATGGATTTACATCGAAAAGCTCTTAAT 424 Query 499 CACTCTCGGGCAAGAGCCTGACATCTCTAGAGTCGCTGGCTCCTACTCATTGTGGCTCGT 558 | ||||||| ||||| ||||||||||| ||||| |||||||||||| | || |||||| | Sbjct 425 CTCTCTCGGTCAAGACCCTGACATCTCCAGAGTTGCTGGCTCCTACGCCTTTTGGCTCAT 484 Query 559 ACCGGCTTTGTTTGCCCATGC-TATTTTCTTACCACTGACTCGGTTTCTGCTAGCACAAG 617 |||||||||||| || ||||| | ||||| |||||||||||||||||||||||||||||| Sbjct 485 ACCGGCTTTGTTCGCACATGCGT-TTTTCATACCACTGACTCGGTTTCTGCTAGCACAAG 543 Query 618 GGTTGGTTATTTCCCTGCTATACTCTGCCATGACCACCCTTTTGTTCCATATTGCGGTTT 677 |||||||| || ||||||| |||||| || ||||||| ||||||||||| || | |||| Sbjct 544 GGTTGGTTCTTCCCCTGCTCTACTCTACCCTGACCACTCTTTTGTTCCACATCCCTGTTT 603 Query 678 GCTGGACTTTGGTTTTCGCGCTTGGTCTTGGAAGCAATGGAGCTGCTATTGCTATTAGTT 737 |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||| Sbjct 604 GCTGGACTTTTGTTTTCGCGCTTGGTCTGGGAAGCAATGGAGCTGCCATGGCTATTAGTG 663 Query 738 TGTCTTTCTGGTTTTACGCTGTGATACTCTCATGTCATGTGAGATTTTTCAGCTCTTGCG 797 |||||||||||||||| | |||||| ||||||||| ||||||| || | |||||| |||| Sbjct 664 TGTCTTTCTGGTTTTATGTTGTGATTCTCTCATGTTATGTGAGGTTCTCCAGCTCCTGCG 723 Query 798 AGAAGACTCGCGGATTTGTATCAAATGATTTTATGTCTAGTATCAAGCAGTACTTCCAGT 857 | |||||||||| ||||||||| | |||||| ||||| |||||| ||||| |||||| | Sbjct 724 ACAAGACTCGCGTATTTGTATCCAGTGATTTCGTGTCTTGTATCAGGCAGTTCTTCCATT 783 Query 858 ACGGAGTCCCATCCGCTGG-ATTGATTTGCTTAGAATGGTGGCTGTTTGAGCTACTCATA 916 ||||||||||||||| || | || ||||| ||||||||||||||||||||||||| ||| Sbjct 784 TCGGAGTCCCATCCGC-GGCAATGCTTTGCCTAGAATGGTGGCTGTTTGAGCTACTTATA 842 Query 917 CTCTGCTCAGGTCTTCTCCCAAACCCAAAACTCGAGACATCTGTTCTTTCGATTTGTCTT 976 ||||||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||| Sbjct 843 CTCTGCTCAGGTCTTCTCCTAAACCCAAAACTCGAAACCTCTGTTCTTTCAATTTGTCTT 902 Query 977 ACAATAGGAACTTTACACTATGTGATTCCATCTGGAGTCGCGGCGGCTGTGAGCACACGA 1036 |||| || || ||| ||||||||||| ||| |||||||||||||||||||||||||||| Sbjct 903 ACAACAGCAAGTTTGCACTATGTGATCCCAGCTGGAGTCGCGGCGGCTGTGAGCACACGT 962 Query 1037 GTGTCAAACAAATTGGGAGCTGGAAATCCTCAAGTTGCTAGGGTTTCCGTATTGGCAGGG 1096 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 963 GTGTCAAACAAATTGGGAGCTGGAAATCCTCAAGTTGCTAGGGTTTCAGTATTGGCAGGG 1022 Query 1097 CTTTGTCTCTGGCTTGTAGAGTCAGCTTTCTTTAGCACACTTCTCTTCACCTGCCGAAAC 1156 |||||||||||||| ||||| |||| ||||| || ||||||||||||||||||||| ||| Sbjct 1023 CTTTGTCTCTGGCTGGTAGAATCAGTTTTCTCTACCACACTTCTCTTCACCTGCCGGAAC 1082 Query 1157 ATCATAGGCTACACATTCAGCAACAGCAAAGAAGTTGTTGACTATGTTGCTGACATATCT 1216 |||||||||||| |||| |||||||||||||||||||| |||||||| |||||| || || Sbjct 1083 ATCATAGGCTACGCATTTAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTGACCTAACT 1142 Query 1217 CCTTTGCTCTGTCTCTCCTTCATCCTCGACGGATTAACGGCAGTTCTAAATGGAGTGGCT 1276 |||||||||||||||||||| | ||||||||||| || |||||||| ||||| || ||| Sbjct 1143 CCTTTGCTCTGTCTCTCCTTTGTTCTCGACGGATTTACCGCAGTTCTTAATGGTGTTGCT 1202 Query 1277 AGGGGATGTGGGTGGCAACACATTGGAGCTTTGATCAACGTGGTGGCTTATTATCTTGTA 1336 |||||| |||| |||||||||||||||||||||| ||| ||||| ||||||||||| ||| Sbjct 1203 AGGGGAAGTGGTTGGCAACACATTGGAGCTTTGAACAATGTGGTAGCTTATTATCTCGTA 1262 Query 1337 GGAGCTCCTGTTGGAGTTTACTTAGCTTTCAGTCGTGAGTGGAATGGAAAAGGACTCTGG 1396 |||||||| |||||||||||||||||||| | |||||||| || ||||||||||||||| Sbjct 1263 GGAGCTCCGGTTGGAGTTTACTTAGCTTTTAATCGTGAGTTTAACGGAAAAGGACTCTGG 1322 Query 1397 TGCGGTGTTATGGTTGGATCCGCGGTGCAAGCCACTT-TACTGGCTATCGTCACA-GCCT 1454 ||||||||| |||| |||||||| |||||||||| || ||||| || | |||||| | | Sbjct 1323 TGCGGTGTTGTGGTCGGATCCGCTGTGCAAGCCA-TTATACTGTCTTTTGTCACATGT-T 1380 Query 1455 CCATGAACTGGAAGGAACAGGCTGAGAAAGCAAGGAAGAGAATAATCTCTACTGAAAATG 1514 |||| || |||||||||||||||||||| || ||||||||||||||||| ||||||||| Sbjct 1381 CCATAAATTGGAAGGAACAGGCTGAGAAGGCTAGGAAGAGAATAATCTCGACTGAAAATA 1440 Query 1515 GATTGGTTT-AAATAAAGGTTGTTCCTAAGAG 1545 |||||| || ||| || ||| ||| || |||| Sbjct 1441 GATTGGCTTGAAAGAAGGGT-GTTTCTGAGAG 1471 > Ahg480060 jgi|Araly1|480060|fgenesh2_kg.3__2761__AT2G04040.1 Length=1483 Score = 1570 bits (850), Expect = 0.0 Identities = 1277/1484 (86%), Gaps = 26/1484 (2%) Strand=Plus/Plus Query 92 ACAATGGAAGAGCCATTTCTTCCGAGAGACGAGCAGT-TAGTCTCTTGT-AAATCCACAT 149 |||||||||||||||||||||||||||||||||| | ||||| | | | | | ||||| Sbjct 2 ACAATGGAAGAGCCATTTCTTCCGAGAGACGAGC-TTCTAGTCCCCTCTCCAGT-CACAT 59 Query 150 GGCAAAGTGGTCAGGTCACCGTCGAGCTGAAGAAAGTGAGCCGCTTGGCCGCTCCTATGG 209 |||||| ||| | ||||||||||| |||||| |||||||||||||||||||||||| Sbjct 60 GGCAAACAAATCAATTAACCGTCGAGCTAAAGAAACTGAGCCGCTTGGCCGCTCCTATGG 119 Query 210 CCACCGTAACCATAGCTCAGTACTTATTGCCTGTCATCTCAGTCATGGTCGCCGGCCACA 269 ||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 120 CCACCGTGACCATTGCTCAGTACTTATTGCCTGTCATCTCAGTCATGGTCGCTGGCCACA 179 Query 270 TCGGCGAGTTGGAGCTCGCCGGTGTCGCGCTTGCCACGTCTTTCACAAACGTTTCCGGCT 329 ||||||| | ||||| ||||||| || ||||| || || ||||||||||| |||| | Sbjct 180 ACGGCGAGCTCCAGCTCTCCGGTGTGGCTCTTGCAACCTCCTTCACAAACGTCACCGGTT 239 Query 330 TCAGCATAATGTTTGGGTTAGTTGGTGCA-TTGGAAACTCTTTGTGGCCAAGCCTATGGA 388 ||||||| |||| ||| ||||| |||||| ||| ||||||||||||||||||| |||||| Sbjct 240 TCAGCATTATGTGTGGATTAGTGGGTGCACTTG-AAACTCTTTGTGGCCAAGCTTATGGA 298 Query 389 GC-AGAACAATACGAAAAAATCGGAACCTATACATACTCTGCAATGGCTTCCAACATACC 447 || | |||||||||| ||||||||||| || ||||||||||||| |||||||||||| | Sbjct 299 GCCA-AACAATACGACAAAATCGGAACTTACGCATACTCTGCAATTGCTTCCAACATAAC 357 Query 448 AATTTGTTTCATCATATCAATTCTATGGATTTACATCGAAAAGCTCTTGATCACTCTCGG 507 |||||||||| ||||||||||||| ||| ||||||| |||||| ||||||| |||| || Sbjct 358 AATTTGTTTCCTCATATCAATTCTCTGGCTTTACATTGAAAAGATCTTGATTGCTCTAGG 417 Query 508 GCAAGAGCCTGACATCTCTAGAGTCGCTGGCTCCTACTCATTGTGGCTCGTACCGGCTTT 567 ||||| ||||| || || ||| |||||||||||||| | || |||||| ||||| |||| Sbjct 418 ACAAGACCCTGAAATTTCAAGAATCGCTGGCTCCTACGCCTTTTGGCTCATACCGACTTT 477 Query 568 GTTTGCCCATGCTATTTTCTTACCACTGACTCGGTTTCTGCT-AGCACAAGGGTTGGTTA 626 || | ||| || ||| || |||||||| | ||||||||||| | |||||||||||||| Sbjct 478 ATTCGGCCAAGCGATTGTCATACCACTGTCCCGGTTTCTGCTGA-CACAAGGGTTGGTTC 536 Query 627 TTTCC-CTGCTATACTCTGCCATGACCACCCTTTTGTTCCATATTGCGGTTTGCTGGACT 685 || || ||||| | | ||||| |||| |||||||||||||| || ||||| |||||| Sbjct 537 TT-CCTCTGCTCTTCACTGCCGTGACTACCCTTTTGTTCCACGTTTTTGTTTGTTGGACT 595 Query 686 TTGGTTTTCGCGCTTGGTCTTGGAAGCAATGGAGCTGCTATTGCTATTAGTTTGTCTTTC 745 ||||||||| | ||||||| ||||| |||||| |||| || |||| |||| |||||||| Sbjct 596 TTGGTTTTCTTGTTTGGTCTGGGAAGTAATGGACCTGCCATGGCTACTAGTGTGTCTTTC 655 Query 746 TGGTTTTACGCTGTGATACTCTCATGTCATGTGAGATTTTTCAGCTCTTGCGAGAAGACT 805 ||||||||||||||||||||||||||| |||||| ||| | ||||||||||||||||||| Sbjct 656 TGGTTTTACGCTGTGATACTCTCATGTTATGTGAAATTCTCCAGCTCTTGCGAGAAGACT 715 Query 806 CGCGGATTTGTATC--AAATGATTTTATGTCTAGTATCAAGCAGTACTTCCAGTACGGAG 863 |||||||||||||| ||| ||||| ||||| ||||||||||| |||||| |||||| Sbjct 716 CGCGGATTTGTATCCGAAA--ATTTTGTGTCTTCTATCAAGCAGTTCTTCCAATACGGAA 773 Query 864 TCCCATCCGCTGGATTGATTTGCTTAGAATGGTGGCTGTTTGAGCTACTCATACTCTGCT 923 ||||||| |||| | |||||||| ||||||||||||| |||||| ||||||||||||||| Sbjct 774 TCCCATCAGCTGCAATGATTTGCCTAGAATGGTGGCTATTTGAGATACTCATACTCTGCT 833 Query 924 CAGGTCTTCTCCCAAACCCAAAACTCGAGACATCTGTTCTTTCGATTTGTCTTACAATAG 983 ||||||||||||| ||||| ||||||||||| ||||||||||| || ||||||||||||| Sbjct 834 CAGGTCTTCTCCCTAACCCGAAACTCGAGACCTCTGTTCTTTCCATATGTCTTACAATAG 893 Query 984 GAACTTTACACTATGTGATTCCATCTGGAGTCGCGGCGGCTGTGAGCACACGAGTGTCAA 1043 |||||| |||||||||||| || |||||||||| ||||||||||||||||| || |||| Sbjct 894 AAACTTTGCACTATGTGATTGCAGCTGGAGTCGCTGCGGCTGTGAGCACACGTGTATCAA 953 Query 1044 ACAAATTGGGAGCTGGAAATCCTCAAGTTGCTAGGGTTTCCGTATTGGCAGGGCTTTGTC 1103 |||| ||||||||||| ||||||||||||||||||||||| ||||| |||||||| |||| Sbjct 954 ACAATTTGGGAGCTGGGAATCCTCAAGTTGCTAGGGTTTCAGTATTAGCAGGGCTCTGTC 1013 Query 1104 TCTGGCTTGTAGAGTCAGCTTTCTTTAGCACACTTCTCTTCACCTGCCGAAACATCATAG 1163 ||||| | ||||| |||||||||||||||| |||||||||| ||| | | |||||||||| Sbjct 1014 TCTGGATAGTAGAATCAGCTTTCTTTAGCATACTTCTCTTCGCCTTCAGGAACATCATAG 1073 Query 1164 GCTACACATTCAGCAACAGCAAAGAAGTTGTTG-ACTATGTTGCTGACAT-ATCTCCTTT 1221 ||||| ||||||||||||||||||||||| ||| ||||||| |||||| | | ||||||| Sbjct 1074 GCTACGCATTCAGCAACAGCAAAGAAGTT-TTGGACTATGTCGCTGACCTGA-CTCCTTT 1131 Query 1222 GCTCTGTCTCTCCTTCATCCTCGACGGATTAACGGCAGTTCTAAATGGAGTGGCTAGGGG 1281 |||||||||||| |||||||||||||| || || |||||||| ||||| || ||||| || Sbjct 1132 GCTCTGTCTCTCTTTCATCCTCGACGGCTTCACAGCAGTTCTTAATGGGGTTGCTAGAGG 1191 Query 1282 ATGTGGGTGGCAACACATTGGAGCTTTGATCAA--CGTGGTGGCTTATTATCTTGTAGGA 1339 | |||||||||||||||||||||||| || ||| | || | |||||||||| |||||| Sbjct 1192 AAGTGGGTGGCAACACATTGGAGCTTGGAACAATAC-TGTTT-CTTATTATCTCGTAGGA 1249 Query 1340 GCTCCTGTTGGAGTTTACTTAGCTTTCAGTCGTGAGTGGAATGGAAAAGGACTCTGGTGC 1399 |||||||||||| |||||||||||||||||| || || ||| ||||||||||| |||||| Sbjct 1250 GCTCCTGTTGGAATTTACTTAGCTTTCAGTCTTGGGTTGAACGGAAAAGGACTTTGGTGC 1309 Query 1400 GGTGTTATGGTTGGATCCGCGGTGCAAGCCACTTTACTGGCTATCGTCACAGCCTCCATG 1459 |||||| |||||||||| | || ||||| ||| |||||||||| |||||| | ||||| Sbjct 1310 GGTGTTGTGGTTGGATCTACTGTACAAGCTACTATACTGGCTATTGTCACAACTTCCATA 1369 Query 1460 AACTGGAAGGAACAGGCTGAGAAAGCAAGGAAGAGAATA-ATCTCTACTGAAAATGGATT 1518 || |||||||||||||||||||| || |||||||||||| | ||| ||||||||| |||| Sbjct 1370 AATTGGAAGGAACAGGCTGAGAAGGCTAGGAAGAGAATAGA-CTCAACTGAAAATAGATT 1428 Query 1519 GGTTTAAATAAAGGTTGTTCCTAAGAGCTATCTCAAAGTATTTG 1562 || ||||| ||| | |||| || | || ||||||||| |||||| Sbjct 1429 GGCTTAAACAAATGATGTTTCTCATAGTTATCTCAAACTATTTG 1472 > Ahg342751 jgi|Araly1|342751|fgenesh1_pg.C_scaffold_3002514 Length=438 Score = 625 bits (338), Expect = 4e-178 Identities = 405/438 (92%), Gaps = 2/438 (0%) Strand=Plus/Plus Query 1089 TGGCAGGGCTTTGTCTCTGGCTTGTAGAGTCAGCTTTCTTTAGCACACTTCTCTTCACCT 1148 |||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||| Sbjct 2 TGGCAGGGCTTTGTCTCTGGATAGTAGAATCAGCTTTCTTTAGCACACTTCTCTTCACCT 61 Query 1149 GCCGAAACATCATAGGCTACACATTCAGCAACAGCAAAGAAGTTGTTGACTATGTTGCTG 1208 | || || ||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 62 GTCGGAATATCGTAGGCTACACATTCAGCAACAGCAAAGAAGTTGTTGACTATGTGGCTG 121 Query 1209 ACATATC-TCCTTTGCTCTGTCTCTCCTTCATCCTCGACGGATTAACGGCAGTTCTAAAT 1267 ||||||| | ||||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct 122 ACATATCATA-TTTGCTCTGTCTCTCATTCATCCTCGACGGATTTACCGCAGTTCTAAAT 180 Query 1268 GGAGTGGCTAGGGGATGTGGGTGGCAACACATTGGAGCTTTGATCAACGTGGTGGCTTAT 1327 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GGAGTTGCTAGAGGATGTGGGTGGCAACACATTGGAGCTTTGATCAACGTGGTGGCTTAT 240 Query 1328 TATCTTGTAGGAGCTCCTGTTGGAGTTTACTTAGCTTTCAGTCGTGAGTGGAATGGAAAA 1387 ||||| ||||| || || ||||||||||||||||||||||||| ||||||||| |||||| Sbjct 241 TATCTCGTAGGTGCCCCGGTTGGAGTTTACTTAGCTTTCAGTCTTGAGTGGAACGGAAAA 300 Query 1388 GGACTCTGGTGCGGTGTTATGGTTGGATCCGCGGTGCAAGCCACTTTACTGGCTATCGTC 1447 ||||| |||||||||||||||||||||||||| || ||||||||| |||||||||||||| Sbjct 301 GGACTGTGGTGCGGTGTTATGGTTGGATCCGCTGTACAAGCCACTATACTGGCTATCGTC 360 Query 1448 ACAGCCTCCATGAACTGGAAGGAACAGGCTGAGAAAGCAAGGAAGAGAATAATCTCTACT 1507 ||||| ||||| || ||||||||||||||||||||||| |||||||||||| |||| ||| Sbjct 361 ACAGCGTCCATAAATTGGAAGGAACAGGCTGAGAAAGCTAGGAAGAGAATAGTCTCAACT 420 Query 1508 GAAAATGGATTGGTTTAA 1525 ||||||||||||| |||| Sbjct 421 GAAAATGGATTGGCTTAA 438 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62353731065 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5