BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G04090.1 Length=1434 Score E Sequences producing significant alignments: (Bits) Value Ahg342752 jgi|Araly1|342752|fgenesh1_pg.C_scaffold_3002515 2185 0.0 Ahg480065 jgi|Araly1|480065|fgenesh2_kg.3__2766__AT2G04100.1 1993 0.0 Ahg480060 jgi|Araly1|480060|fgenesh2_kg.3__2761__AT2G04040.1 651 0.0 > Ahg342752 jgi|Araly1|342752|fgenesh1_pg.C_scaffold_3002515 Length=1428 Score = 2185 bits (1183), Expect = 0.0 Identities = 1352/1433 (94%), Gaps = 14/1433 (1%) Strand=Plus/Plus Query 1 ATGGAAGATCCACTTTTATTGGGAGATGATCAGTTAATCACTAGAAACCTCAAGTCAACG 60 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1 ATGGAAGATCCACTTTTATTGGGAGATGATCAGTTAATCACTAGAAACCTAAAGTCAACG 60 Query 61 CCGACATGGTGGATGAATTTTACGGCGGAGCTGAAGAACGTCAG-CTCTATGGCGGCGCC 119 ||||||||| ||||| |||||||||||||||||||||||||||| | | ||||| ||| | Sbjct 61 CCGACATGGAGGATGGATTTTACGGCGGAGCTGAAGAACGTCAGCCGC-ATGGCAGCGTC 119 Query 120 TATGGCCACCGTGACAGTGTCTCAATATCTATTGCCCGTGATCTCGGTCATGGTCGCCGG 179 ||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||| Sbjct 120 TATGGCCACAGTGACCGTGGCTCAATATCTATTGCCCGTTATCTCGGTCATGGTCGCCGG 179 Query 180 CCACTGCGGTGAACTCCAGCTGTCTGGTGTCACTCTTGCCACTGCTTTCGCAAACGTCTC 239 |||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct 180 CCACCGCGGTGAACTCCAGCTGTCTGGTGTCGCTCTTGCCACTGCTTTCGCTAACGTCTC 239 Query 240 CGGCTTCGGCATCATGTATGGTTTAGTGGGTGCACTTGAAACTCTATGTGGCCAAGCTTA 299 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 AGGCTTCGGCATCATGTATGGTTTAGTGGGTGCACTTGAAACTCTATGTGGCCAAGCTTA 299 Query 300 TGGAGCAAAACAATAC-ACTAAAATCGGAACTTACACTTTCTCTGCAATAGTCTCAAACG 358 |||||||||||||||| | |||||| ||||||||||||| |||||||||||||||||||| Sbjct 300 TGGAGCAAAACAATACGA-TAAAATAGGAACTTACACTTACTCTGCAATAGTCTCAAACG 358 Query 359 TACCTA-TAGTTGTTCTCATATCGATTCTCTGGTTTTACATGGACAAACTCTTTG-TTTC 416 |||| | | | | |||||||||| || |||||||||||||||||||||||| ||| |||| Sbjct 359 TACCCATTTG-TCTTCTCATATCTATCCTCTGGTTTTACATGGACAAACTC-TTGATTTC 416 Query 417 ACTTGGACAAGATCCTGACATCTCCAAGGTAGCTGGTTCTTACGCGGTTTGTCTTATACC 476 | | |||||||| |||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 417 AATCGGACAAGACCCTGACATCTCCAAGGTAGCTGGTTCCTATGCGGTTTGTCTTATACC 476 Query 477 GGCATTGTTAGCTCAAGCAGTGCAACAACCTTTGACTCGGTTTCTCCAGACTCAGGGTTT 536 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 477 GGCATTGTTAGCTCAAGCGGTGCAACAACCTTTGACTCGGTTTCTCCAGACTCAGGGTTT 536 Query 537 GGTTCTTCCTCTTCTCTACTGTGCCATAACCACCCTTTTATTCCATATACCAGTTTGTTT 596 |||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||| Sbjct 537 GGTTCTTCCTCTTCTCTACTGTGCCATAACTACCCTTTTGTTCCATATACCCGTTTGTTT 596 Query 597 GATTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCCTTGGCTATTGGTTTGTC 656 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 597 GACTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCCTTGGCTATTGGTTTCTC 656 Query 657 TTACTGGTTTAATGTCTTGATTCTTGCTTTATATGTGAGATTTTCAAGCGCTTGCGAGAA 716 |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 657 TTACTGGTTTAATGTCTTAATTCTTGCTTTATATGTGAGATTTTCAAGATCTTGCGAGAA 716 Query 717 GACTCGCGGCTTTGTATCCGATGATTTCGTGTTGAGTGTCAAGCAGTTTTTTCAGTATGG 776 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 717 GACTCGCGGCTTTGTATCCGATGATTTCGTGTTGAGCGTCAAGCAGTTTTTTCAGTATGG 776 Query 777 GATACCATCAGCAGCAATGACAACCATAGAATGGTCGTTGTTTGAGCTCCTTATCTTATC 836 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || || Sbjct 777 GATACCATCAGCAGCAATGACTACCATCGAATGGTCGTTGTTTGAGCTCCTTATATTGTC 836 Query 837 TTCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAAC 896 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 837 CTCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAAC 896 Query 897 ATCATCTCTCCACTGTGTCATTCCAATGGGTATCGGGGCTGCTGGAAGCACACGGATTTC 956 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 897 ATCATCTCTCCACTGTGTCATTCCAATGGGTATCGGGGCTGCTGGAAGCACACGGATTTC 956 Query 957 AAACGAATTGGGAGCGGGAAATCCGGAGGTTGCTAGGCTGGCAGTGTTTGCCGGTATTTT 1016 |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| Sbjct 957 AAACGAATTGGGAGCGGGGAATCCCGAGGTTGCTAGGCTGGCAGTGTTCGCCGGTATTTT 1016 Query 1017 CCTTTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTGTTCACTTGCAAAAATATTTT 1076 ||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct 1017 CCTGTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTCTTCACGTGCAAAAATATCTT 1076 Query 1077 TGGCTACGCGTTCAGCAATAGCAAAGAAGTTGTGGACTATGTCACGGAGCTATCTTCGCT 1136 || || || ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1077 CGGGTATGCCTTCAGCAATAGCAAAGAAGTTGTGGACTATGTCACGGAGCTATCTTCTCT 1136 Query 1137 GCTTTGTCTTTCATTTATGGTCGATGGATTTTCTTCAGTGCTTGATGGGGTTGCTAGGGG 1196 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1137 GCTTTGTCTCTCATTTATGGTTGATGGATTTTCTTCAGTGCTTGATGGGGTTGCTAGGGG 1196 Query 1197 AAGTGGGTGGCAAAATATTGGAGCTTGGGCAAATGTGGTGGCTTACTATCTCCTAGGAGC 1256 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1197 AAGTGGGTGGCAAAATATTGGCGCTTGGGCAAATGTGGTGGCTTACTATCTCCTAGGAGC 1256 Query 1257 TCCTGTTGGATTTTTCTTAGGATTTTGGGGTCATATGAACGGCAAAGGGCTATGGATTGG 1316 ||| |||||| ||||||||||||||||| |||| |||||||| ||||||||||||||||| Sbjct 1257 TCCGGTTGGACTTTTCTTAGGATTTTGGTGTCACATGAACGGTAAAGGGCTATGGATTGG 1316 Query 1317 TGTGATCGTTGGGTCCACTG-CTCAAGGGATCATACTAGCTATAGTCACTGCTTGCCTGA 1375 |||| |||||||||| | || ||||||| ||||||||||||||||| ||||||||| ||| Sbjct 1317 TGTGGTCGTTGGGTCTA-TGGCTCAAGGCATCATACTAGCTATAGTTACTGCTTGCATGA 1375 Query 1376 GTTGGGAGGAGCAGGCTGCCAAGGCCAGAGAA-A-GAATAGTTGGAAGAACAT 1426 ||||||||||||||||||||||||| | |||| | | |||||||||||||||| Sbjct 1376 GTTGGGAGGAGCAGGCTGCCAAGGC-A-AGAATACGGATAGTTGGAAGAACAT 1426 > Ahg480065 jgi|Araly1|480065|fgenesh2_kg.3__2766__AT2G04100.1 Length=1559 Score = 1993 bits (1079), Expect = 0.0 Identities = 1315/1430 (92%), Gaps = 12/1430 (1%) Strand=Plus/Plus Query 1 ATGGAAGATCCACTTTTATTGGGAGATGATCAGTTAATCACTAGAAACCTCAAGTCAACG 60 |||||||||||||||||||||| ||| |||||| ||||||| ||| || ||| | ||| Sbjct 80 ATGGAAGATCCACTTTTATTGGAAGACGATCAGATAATCACCGGAAGTCTTAAGCCGACG 139 Query 61 CCGACATGGTGGATGAATTTTACGGCGGAGCTGAAGAACGTCAG-CTCTATGGCGGCGCC 119 ||||||||| | |||||||| ||||||||||| ||||||||||| | | |||||| ||| Sbjct 140 CCGACATGGAGAATGAATTTCACGGCGGAGCTAAAGAACGTCAGCCGC-ATGGCGTTGCC 198 Query 120 TATGGCCACCGTGACAG-TGTCTCAATATCTATTGCCCGTGATCTCGGTCATGGTCGCCG 178 ||||||||||||||| | || ||||||||||||||||||| ||||| ||||||||||||| Sbjct 199 TATGGCCACCGTGACCGTTG-CTCAATATCTATTGCCCGTTATCTCAGTCATGGTCGCCG 257 Query 179 GCCACTGCGGTGAACTCCAGCTGTCTGGTGTCACTCTTGCCACTGCTTTCGCAAACGTCT 238 ||||| || | ||||||||||| || || ||| ||||||||||| |||| |||||||||| Sbjct 258 GCCACCGCAGCGAACTCCAGCTCTCCGGCGTCGCTCTTGCCACTTCTTTTGCAAACGTCT 317 Query 239 CCGGCTTCGGCATCATGTATGGTTTAGTGGGTGCACTTGAAACTCTATGTGGCCAAGCTT 298 | |||||| || |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 318 CTGGCTTCAGCCTCATGTTTGGTTTAGTGGGTGCACTTGAAACTCTATGTGGCCAAGCTT 377 Query 299 ATGGAGCAAAACAATACACTAAAATCGGAACTTACACTTTCTCTGCAATAGTCTCAAACG 358 ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| Sbjct 378 ATGGAGCAAAACAATACGCGAAAATCGGAACTTACACTTACTCTGCAATAGTCTCAAACA 437 Query 359 TACCTATAGTTGTTCTCATATCGATTCTCTGGTTTTACATGGACAAACTCTTTG-TTTCA 417 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||| Sbjct 438 TACCTATAGTTGTTCTCATATCGATTCTCTGGTTTTATATGGACAAACTC-TTGATTTCA 496 Query 418 CTTGGACAAGATCCTGACATCTCCAAGGTAGCTGGTTCTTACGCGGTTTGTCTTATACCG 477 | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 497 ATCGGACAAGATCCTGACATCTCCAAGGTAGCTGGTTCCTACGCGGTTTGTCTTATACCT 556 Query 478 GCATTGTTAGCTCAAGCAGTGCAACAACCTTTGACTCGGTTTCTCCAGACTCAGGGTTTG 537 ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| Sbjct 557 GCATTGTTAGCTCAAGCGGTGCAACAACCTTTGAATCGGTTTCTCCAGACTCAGGGCTTG 616 Query 538 GTTCTTCCTCTTCTCTACTGTGCCATAACCACCCTTTTATTCCATATA-CCAGTTTGTTT 596 |||||||||||||||||||||||||| ||||| ||||| ||||||||| | |||||||| Sbjct 617 GTTCTTCCTCTTCTCTACTGTGCCATCACCACACTTTTGTTCCATATATTC-GTTTGTTT 675 Query 597 GATTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCCTTGGCTATTGGTTTGTC 656 | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 676 GGTTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCATTGGCTATTGGTTTGTC 735 Query 657 TTACTGGTTTAATGTCTTGATTCTTGCTTTATATGTGAGATTTTCAAGCGCTTGCGAGAA 716 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 736 TTACTGGTTTAATGTCTTGATTCTTGCTTTATATGTGAGATTTTCAAGCGCTTGCGAAAA 795 Query 717 GACTCGCGGCTTTGTATCCGATGATTTCGTGTTGAGTGTCAAGCAGTTTTTTCAGTATGG 776 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 796 GACTCGGGGCTTTGTATCCGATGATTTCGTGTTGAGTGTCAAGCAGTTTTTTCAGTATGG 855 Query 777 GATACCATCAGCAGCAATGACAACCATAGAATGGTCGTTGTTTGAGCTCCTTATCTTATC 836 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||| Sbjct 856 GATACCATCAGCAGCAATGACTACCATTGAATGGTCGTTGTTTGAGCTCCTTATATTATC 915 Query 837 TTCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAAC 896 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 916 CTCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAAC 975 Query 897 ATCATCTCTCCACTGTGTCATTCCAATGGGTATCGGGGCTGCTGGAAGCACACGGATTTC 956 |||||||||||||| |||||||||||||||||||||||| ||||||||| |||| |||| Sbjct 976 ATCATCTCTCCACTATGTCATTCCAATGGGTATCGGGGCGGCTGGAAGCGTACGGGTTTC 1035 Query 957 AAACGAATTGGGAGCGGGAAATCCGGAGGTTGCTAGGCTGGCAGTGTTTGCCGGTATTTT 1016 |||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| Sbjct 1036 AAACGAATTGGGAGCGGGGAATCCGGAGGTTGCTAGGCTGGCAGTGCTTACCGGTATTTT 1095 Query 1017 CCTTTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTGTTCACTTGCAAAAATATTTT 1076 ||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| || Sbjct 1096 CCTTTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTCTTCATTTGCAGAAATATCTT 1155 Query 1077 TGGCTACGCGTTCAGCAATAGCAAAGAAGTTGTGGACTATGTCACGGAGCTATCTTCGCT 1136 || || || |||||||| |||||||||||||||||||||||||| ||||||||| | | Sbjct 1156 CGGGTATGCCTTCAGCAACAGCAAAGAAGTTGTGGACTATGTCACAGAGCTATCTCCTTT 1215 Query 1137 GCTTTGTCTTTCATTTATGGTCGATGGATTTTCTTCAGTGCTTGATGGGGTTGCTAGGGG 1196 ||||||| | ||||||||||| ||||||||||| ||||||||| ||||||||||||||| Sbjct 1216 GCTTTGTATCTCATTTATGGTTGATGGATTTTCGGCAGTGCTTGGTGGGGTTGCTAGGGG 1275 Query 1197 AAGTGGGTGGCAAAATATTGGAGCTTGGGCAAATGTGGTGGCTTACTATCTCCTAGGAGC 1256 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1276 AAGTGGATGGCAACATATTGGAGCTTGGGCAAATGTGGTGGCTTACTATCTCCTAGGAGC 1335 Query 1257 TCCTGTTGGATTTTTCTTAGGATTTTGGGGTCATATGAACGGCAAAGGGCTATGGATTGG 1316 ||| |||||| ||||||||||||||||| |||| |||||||| |||||||||||||| || Sbjct 1336 TCCGGTTGGACTTTTCTTAGGATTTTGGTGTCACATGAACGGTAAAGGGCTATGGATCGG 1395 Query 1317 TGT-GATCGTTGGGTCCACTGCTCAAGGGATCATACTAGCTATAGTCACTGCTTGCCTGA 1375 ||| | | |||||||| || || ||||| ||||||||||||||||||||||||||| ||| Sbjct 1396 TGTAG-TGGTTGGGTCTACGGCGCAAGGAATCATACTAGCTATAGTCACTGCTTGCATGA 1454 Query 1376 GTTGGGAGGAGCAGGCTGCCAAGGCCAGAGAA-AGAATAGTTGGAAGAAC 1424 ||||| | ||||||||||||||||| ||| || |||||||||| | |||| Sbjct 1455 GTTGGAATGAGCAGGCTGCCAAGGCAAGA-AAGAGAATAGTTGTACGAAC 1503 > Ahg480060 jgi|Araly1|480060|fgenesh2_kg.3__2761__AT2G04040.1 Length=1483 Score = 651 bits (352), Expect = 0.0 Identities = 1051/1376 (76%), Gaps = 98/1376 (7%) Strand=Plus/Plus Query 88 GAGCTGAAG-AACGTCAG-CTCTATGGCGGCGCCTATGGCCACCGTGA-CAGTGTCTCAA 144 ||||| ||| ||| | || | || |||| || |||||||||||||||| || || |||| Sbjct 83 GAGCTAAAGAAAC-TGAGCCGCT-TGGCCGCTCCTATGGCCACCGTGACCATTG-CTCAG 139 Query 145 TATC-TATTGCCCGTGATCTCGGTCATGGTCGCCGGCCACTGCGGTGAACTCCAGCTGTC 203 || | ||||||| || ||||| ||||||||||| |||||| ||| || |||||||| || Sbjct 140 TA-CTTATTGCCTGTCATCTCAGTCATGGTCGCTGGCCACAACGGCGAGCTCCAGCTCTC 198 Query 204 TGGTGTCACTCTTGCCA-CTGCTTTCGCAAACGTCTCCGGCTTCGGCATCATGTATGGTT 262 ||||| ||||||| | || | ||| |||||||| |||| ||| |||| |||| ||| | Sbjct 199 CGGTGTGGCTCTTGCAACCT-CCTTCACAAACGTCACCGGTTTCAGCATTATGTGTGGAT 257 Query 263 TAGTGGGTGCACTTGAAACTCTATGTGGCCAAGCTTATGGAGCAAAACAATAC-ACTAAA 321 |||||||||||||||||||||| |||||||||||||||||||| ||||||||| || ||| Sbjct 258 TAGTGGGTGCACTTGAAACTCTTTGTGGCCAAGCTTATGGAGCCAAACAATACGAC-AAA 316 Query 322 ATCGGAACTTACACTTTCTCTGCAATAGTC-TCAAACGTACCTATAGTTG-TT-CTCATA 378 |||||||||||| | | ||||||||| | | || ||| || | | | ||| || |||||| Sbjct 317 ATCGGAACTTACGCATACTCTGCAATTG-CTTCCAACATAAC-A-ATTTGTTTCCTCATA 373 Query 379 TCGATTCTCTGGTTTTACATGGACAAA-CTCTTTG-TTTCACTTGGACAAGATCCTGACA 436 || ||||||||| ||||||| || ||| || ||| || | || |||||||| ||||| | Sbjct 374 TCAATTCTCTGGCTTTACATTGA-AAAGATC-TTGATTGCTCTAGGACAAGACCCTGAAA 431 Query 437 TCTCCAAG-GTAGCTGGTTCTTACGCGGTTTGTCTTATACCGGCATTGTT-AGCTCAAGC 494 | | |||| | ||||| || ||||| |||| || |||||| | || || || ||||| Sbjct 432 T-TTCAAGAATCGCTGGCTCCTACGCCTTTTGGCTCATACCGACTTTATTCGGC-CAAGC 489 Query 495 -AGTGCAACA-ACCTTTGACTCGGTTTCTCCAGACTC-AGGGTTTGGTTCTTCCTCTTCT 551 | || || ||| || | |||||||| | ||| | |||| |||||||||||||| || Sbjct 490 GATTG--TCATACCACTGTCCCGGTTTCTGCTGACACAAGGG-TTGGTTCTTCCTCTGCT 546 Query 552 CTACTGTGCCATAACCACCCTTTTATTCCATATACCAGTTTGTTTGA-TTCTGGTTTACG 610 || | |||| | || |||||||| ||||| | ||||||| || || |||||| | Sbjct 547 CTTCACTGCCGTGACTACCCTTTTGTTCCACGTTTTTGTTTGTTGGACTT-TGGTTTTCT 605 Query 611 CGTTTGGTCTTGGAAGCAATGGAGCC-GCCTTGGCTATTGGTTTGTCTTACTGGTTTAAT 669 ||||||||| ||||| |||||| || ||| |||||| | || |||||| ||||||| | Sbjct 606 TGTTTGGTCTGGGAAGTAATGGA-CCTGCCATGGCTACTAGTGTGTCTTTCTGGTTTTAC 664 Query 670 GTCT-TGATTCT-TGC-TTTATATGTGAGATTTTCAAGCGCTTGCGAGAAGACTCGCGGC 726 | || |||| || | | | | ||||||| ||| || ||| ||||||||||||||||||| Sbjct 665 G-CTGTGATACTCT-CATGT-TATGTGAAATTCTCCAGCTCTTGCGAGAAGACTCGCGGA 721 Query 727 TTTGTATCCGATGATTTCGTGT-TGAGTGTCAAGCAGTTTTTTCAGTATGGGATACCATC 785 ||||||||||| |||| |||| | | |||||||||| || || || || || ||||| Sbjct 722 TTTGTATCCGAAAATTTTGTGTCT-TCTATCAAGCAGTTCTTCCAATACGGAATCCCATC 780 Query 786 AGCAGCAATGA-CAACCATAGAATGGTCGTTGTTTGAGCTCCTTAT-CTTAT-CTTCAGG 842 ||| ||||||| || ||||||||| | | |||||| | || || | | | | ||||| Sbjct 781 AGCTGCAATGATTTGCC-TAGAATGGTGGCTATTTGAGATACTCATAC-TCTGC-TCAGG 837 Query 843 ACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAACATCATC 902 || ||||| |||||||||||||||||||||||||||||||| |||||||||| | | | Sbjct 838 TCTTCTCCCTAACCCGAAACTCGAGACCTCTGTTCTTTCCATATGTCTTACAATAGAAAC 897 Query 903 TCTCCACTGTGTCATTCCAA-TGG-GTATCGG-GGCTGCTGGAAGCACACG-GATTTCAA 958 | | |||| ||| ||| || ||| || | | ||||| || | ||||||| | | |||| Sbjct 898 TTTGCACTATGTGATTGCAGCTGGAGTCGCTGCGGCTG-TG-A-GCACACGTG-TATCAA 953 Query 959 ACGAATT-GGGAGC-GGGAAATCCGGAGGTTGCTAGGCTGGCAGTGTTTGCCGGTATTT- 1015 || |||| |||||| ||||| ||| | ||||||||| | |||| || || || | | Sbjct 954 AC-AATTTGGGAGCTGGGAA-TCCTCAAGTTGCTAGGGTTTCAGTATTAGCAGGGCTCTG 1011 Query 1016 TCCTTTGGTTCCTAGAGGCTACCATT-TGTAGCACACTTCTGTTCAC-TTGCAAAAATAT 1073 || | ||| | |||| | | | || | ||||| |||||| ||| | || || || || Sbjct 1012 TC-TCTGGATAGTAGAATC-AGCTTTCTTTAGCATACTTCTCTTCGCCTT-CAGGAACAT 1068 Query 1074 TTTTGGCTACGCGTTCAGCAATAGCAAAGAAGTTGTGGACTATGTCACGGAGCT-ATCTT 1132 | |||||||| |||||||| |||||||||||| ||||||||||| | || || | || Sbjct 1069 CATAGGCTACGCATTCAGCAACAGCAAAGAAGTTTTGGACTATGTCGCTGACCTGA-CTC 1127 Query 1133 CGCTGCTTTGTCTTTCATTT-ATGGTCGATGGATTTTCTTCAGTGCTTGATGGGGTTGCT 1191 | |||| ||||| || ||| || |||| || || | |||| ||| ||||||||||| Sbjct 1128 CTTTGCTCTGTCTCTC-TTTCATCCTCGACGGCTTCACAGCAGTTCTTAATGGGGTTGCT 1186 Query 1192 AGGGGAAGTGGGTGGCAAAATATTGGAGCTTGGG-CAA-A-TGTGGTGGCTTACTATCTC 1248 || ||||||||||||||| | |||||||||||| ||| | ||| | |||| |||||| Sbjct 1187 AGAGGAAGTGGGTGGCAACACATTGGAGCTTGGAACAATACTGTT-T--CTTATTATCTC 1243 Query 1249 CTAGGAGCTCCTGTTGGATTTTTCTTAGGATT---T-TGGGGTCATATGAACGGCAAAGG 1304 ||||||||||||||||| ||| ||||| || | | |||| | |||||| ||||| Sbjct 1244 GTAGGAGCTCCTGTTGGAATTTACTTAGCTTTCAGTCTTGGGT--T--GAACGGAAAAGG 1299 Query 1305 GCTATGGATT-GGTGT-GATCGTTGGGTCCACTGCT-CAAGGGA-TCATACTAGCTATAG 1360 || ||| | ||||| | | ||||| || |||| | |||| | | ||||| ||||| | Sbjct 1300 ACTTTGG-TGCGGTGTTG-TGGTTGGATCTACTG-TACAAGCTACT-ATACTGGCTATTG 1355 Query 1361 TCACTGCTTGCC-TGAGTTGGGAGGAGCAGGCTGCCAAGGCCAGAGAA-AGAATAG 1414 |||| ||| || | | |||| |||| ||||||| ||||| || ||| ||||||| Sbjct 1356 TCACAACTT-CCATAAATTGGAAGGAACAGGCTGAGAAGGCTAG-GAAGAGAATAG 1409 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53631064960 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5