BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G04100.1 Length=1661 Score E Sequences producing significant alignments: (Bits) Value Ahg480065 jgi|Araly1|480065|fgenesh2_kg.3__2766__AT2G04100.1 2436 0.0 Ahg342752 jgi|Araly1|342752|fgenesh1_pg.C_scaffold_3002515 1960 0.0 Ahg480060 jgi|Araly1|480060|fgenesh2_kg.3__2761__AT2G04040.1 662 0.0 > Ahg480065 jgi|Araly1|480065|fgenesh2_kg.3__2766__AT2G04100.1 Length=1559 Score = 2436 bits (1319), Expect = 0.0 Identities = 1481/1561 (95%), Gaps = 4/1561 (0%) Strand=Plus/Plus Query 1 GAAGTCGTGCATTCTCATCTCACACGTTCCAAGGTCAAGAAAGGATCGTTGACAAGAACT 60 ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1 GAAGTCGTGCATTCTTATCTCACACGTTCCAAGGTAAAGAAAGGATCGTTGACAAGAACT 60 Query 61 AAAGATCTCCAAGAAGATAATGGAAGATCCACTTTTATTGGGAGACAATCAGATAATCAC 120 |||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct 61 AAAGATCTCCGAGAAGATAATGGAAGATCCACTTTTATTGGAAGACGATCAGATAATCAC 120 Query 121 CGGAAGTCTTAAGCCGACGCCGACATGGAGGATGAATTTCACGGCGGAGCTCAAGAACCT 180 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | Sbjct 121 CGGAAGTCTTAAGCCGACGCCGACATGGAGAATGAATTTCACGGCGGAGCTAAAGAACGT 180 Query 181 CAGCCGCATGGCGCTGCCTATGGCCACCGTGACTGTTGCTCAATATCTATTACCCGTTAT 240 ||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 181 CAGCCGCATGGCGTTGCCTATGGCCACCGTGACCGTTGCTCAATATCTATTGCCCGTTAT 240 Query 241 CTCAGTCATGGTCGCCGGCCACCGCAGCGAACTCCAGCTCTCAGGCGTTGCTCTTGCCAC 300 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 241 CTCAGTCATGGTCGCCGGCCACCGCAGCGAACTCCAGCTCTCCGGCGTCGCTCTTGCCAC 300 Query 301 TTCTTTTACAAACGTATCCGGCTTCAGTGTCATGTTTGGTTTAGCGGGTGCACTTGAAAC 360 ||||||| ||||||| || |||||||| ||||||||||||||| ||||||||||||||| Sbjct 301 TTCTTTTGCAAACGTCTCTGGCTTCAGCCTCATGTTTGGTTTAGTGGGTGCACTTGAAAC 360 Query 361 TCTATGTGGCCAAGCTTATGGAGCAAAACAATACGCGAAAATCGGAACTTACACTTTCTC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 361 TCTATGTGGCCAAGCTTATGGAGCAAAACAATACGCGAAAATCGGAACTTACACTTACTC 420 Query 421 TGCAATAGTCTCAAACGTACCTATAGTTGTTCTCATATCGATTCTCTGGTTTTACATGGA 480 |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct 421 TGCAATAGTCTCAAACATACCTATAGTTGTTCTCATATCGATTCTCTGGTTTTATATGGA 480 Query 481 CAAACTCTTTG-TTTCACTTGGACAAGATCCTGACATCTCCAAGGTAGCTGGTTCTTACG 539 ||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||| |||| Sbjct 481 CAAACTC-TTGATTTCAATCGGACAAGATCCTGACATCTCCAAGGTAGCTGGTTCCTACG 539 Query 540 CGGTTTGTCTTATACCGGCATTGTTAGCTCAAGCGGTGCAACAACCTTTGACTCGGTTTC 599 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct 540 CGGTTTGTCTTATACCTGCATTGTTAGCTCAAGCGGTGCAACAACCTTTGAATCGGTTTC 599 Query 600 TCCAGACTCAGGGTTTGGTTCTTCCTCTTCTCTACTGTGCCATAACCACCCTTTTGTTCC 659 ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 600 TCCAGACTCAGGGCTTGGTTCTTCCTCTTCTCTACTGTGCCATCACCACACTTTTGTTCC 659 Query 660 ATATA-CCAGTTTGTTTGATTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCC 718 ||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 660 ATATATTC-GTTTGTTTGGTTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCA 718 Query 719 TTGGCTATTGGTTTGTCTTACTGGTTTAACGTCTTGATTCTTGCTTTATATGTGAGATTT 778 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 719 TTGGCTATTGGTTTGTCTTACTGGTTTAATGTCTTGATTCTTGCTTTATATGTGAGATTT 778 Query 779 TCAAGTTCTTGCGAGAAGACTCGCGGCTTTGTGTCTGATGATTTCGTGTTGAGTGTCAAG 838 ||||| ||||||| |||||||| |||||||| || |||||||||||||||||||||||| Sbjct 779 TCAAGCGCTTGCGAAAAGACTCGGGGCTTTGTATCCGATGATTTCGTGTTGAGTGTCAAG 838 Query 839 CAGTTTTTTCAGTATGGAATACCTTCGGCAGCAATGACAACCATAGAGTGGTCATTGTTT 898 ||||||||||||||||| ||||| || ||||||||||| ||||| || ||||| |||||| Sbjct 839 CAGTTTTTTCAGTATGGGATACCATCAGCAGCAATGACTACCATTGAATGGTCGTTGTTT 898 Query 899 GAGTTCCTTATATTATCTTCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTT 958 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 899 GAGCTCCTTATATTATCCTCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTT 958 Query 959 TCCATTTGTCTTACAACCTCATCTCTCCACTATGTCATTCCAATGGGTATTGGGGCGGCT 1018 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 959 TCCATTTGTCTTACAACATCATCTCTCCACTATGTCATTCCAATGGGTATCGGGGCGGCT 1018 Query 1019 GGAAGTATACGGGTTTCAAACGAATTGGGAGCGGGTAATCCCGAGGTTGCGAGGCTGGCA 1078 ||||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct 1019 GGAAGCGTACGGGTTTCAAACGAATTGGGAGCGGGGAATCCGGAGGTTGCTAGGCTGGCA 1078 Query 1079 GTGTTTGCCGGTATATTCCTTTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTCTTC 1138 ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1079 GTGCTTACCGGTATTTTCCTTTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTCTTC 1138 Query 1139 ATTTGTAGAGATATCTTCGGCTACGCCTTTAGCAATAGCAAAGAAGTTGTGGACTATGTC 1198 ||||| ||| |||||||||| || ||||| ||||| |||||||||||||||||||||||| Sbjct 1139 ATTTGCAGAAATATCTTCGGGTATGCCTTCAGCAACAGCAAAGAAGTTGTGGACTATGTC 1198 Query 1199 ACAGAGCTATCTCCTTTGCTTTGTATCTCATTTTTGGTTGATGGATTTTCTGCAGTGCTT 1258 ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct 1199 ACAGAGCTATCTCCTTTGCTTTGTATCTCATTTATGGTTGATGGATTTTCGGCAGTGCTT 1258 Query 1259 GGTGGGGTTGCTAGGGGAAGTGGATGGCAACATATTGGAGCTTGGGCAAATGTGGTGGCT 1318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1259 GGTGGGGTTGCTAGGGGAAGTGGATGGCAACATATTGGAGCTTGGGCAAATGTGGTGGCT 1318 Query 1319 TACTATCTCCTAGGAGCTCCGGTTGGACTTTTCTTAGGATTTTGGTGTCACATGAATGGT 1378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1319 TACTATCTCCTAGGAGCTCCGGTTGGACTTTTCTTAGGATTTTGGTGTCACATGAACGGT 1378 Query 1379 AAAGGGCTATGGATCGGTGTGGTGGTTGGGTCTACGGCGCAAGGAATCATACTAGCTATA 1438 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1379 AAAGGGCTATGGATCGGTGTAGTGGTTGGGTCTACGGCGCAAGGAATCATACTAGCTATA 1438 Query 1439 GTCACTGCTTGCATGAGTTGGAACGAGCAGGCTGCCAAGGCAAGACAGAGAATAGTTGTA 1498 ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct 1439 GTCACTGCTTGCATGAGTTGGAATGAGCAGGCTGCCAAGGCAAGAAAGAGAATAGTTGTA 1498 Query 1499 AGAACTTCTTCATTTGGCAATGGACTTGCTTGAAGGGTTCTTTATTCCCATTTTTGAGAC 1558 ||||||||||||||||||||||||| |||| || ||||||||||| ||||||||||||| Sbjct 1499 CGAACTTCTTCATTTGGCAATGGACTAGCTTAAAAGGTTCTTTATTTCCATTTTTGAGAC 1558 Query 1559 A 1559 | Sbjct 1559 A 1559 > Ahg342752 jgi|Araly1|342752|fgenesh1_pg.C_scaffold_3002515 Length=1428 Score = 1960 bits (1061), Expect = 0.0 Identities = 1307/1428 (92%), Gaps = 8/1428 (1%) Strand=Plus/Plus Query 80 ATGGAAGATCCACTTTTATTGGGAGACAATCAGATAATCACCGGAAGTCTTAAGCCGACG 139 |||||||||||||||||||||||||| ||||| ||||||| ||| || ||| | ||| Sbjct 1 ATGGAAGATCCACTTTTATTGGGAGATGATCAGTTAATCACTAGAAACCTAAAGTCAACG 60 Query 140 CCGACATGGAGGATGAATTTCACGGCGGAGCTCAAGAACCTCAGCCGCATGGC-GCTGCC 198 ||||||||||||||| |||| ||||||||||| |||||| ||||||||||||| || | | Sbjct 61 CCGACATGGAGGATGGATTTTACGGCGGAGCTGAAGAACGTCAGCCGCATGGCAGC-GTC 119 Query 199 TATGGCCACCGTGACTGTTGCTCAATATCTATTACCCGTTATCTCAGTCATGGTCGCCGG 258 ||||||||| ||||| || |||||||||||||| ||||||||||| |||||||||||||| Sbjct 120 TATGGCCACAGTGACCGTGGCTCAATATCTATTGCCCGTTATCTCGGTCATGGTCGCCGG 179 Query 259 CCACCGCAGCGAACTCCAGCTCTCAGGCGTTGCTCTTGCCACTTCTTTTACAAACGTATC 318 ||||||| | ||||||||||| || || || |||||||||||| |||| | ||||| || Sbjct 180 CCACCGCGGTGAACTCCAGCTGTCTGGTGTCGCTCTTGCCACTGCTTTCGCTAACGTCTC 239 Query 319 CGGCTTCAGTGTCATGTTTGGTTTAGCGGGTGCACTTGAAACTCTATGTGGCCAAGCTTA 378 |||||| | |||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 240 AGGCTTCGGCATCATGTATGGTTTAGTGGGTGCACTTGAAACTCTATGTGGCCAAGCTTA 299 Query 379 TGGAGCAAAACAATACGCGAAAATCGGAACTTACACTTTCTCTGCAATAGTCTCAAACGT 438 ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| Sbjct 300 TGGAGCAAAACAATACGATAAAATAGGAACTTACACTTACTCTGCAATAGTCTCAAACGT 359 Query 439 ACCTA-TAGTTGTTCTCATATCGATTCTCTGGTTTTACATGGACAAACTCTTTG-TTTCA 496 ||| | | | | |||||||||| || |||||||||||||||||||||||| ||| ||||| Sbjct 360 ACCCATTTG-TCTTCTCATATCTATCCTCTGGTTTTACATGGACAAACTC-TTGATTTCA 417 Query 497 CTTGGACAAGATCCTGACATCTCCAAGGTAGCTGGTTCTTACGCGGTTTGTCTTATACCG 556 | |||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 418 ATCGGACAAGACCCTGACATCTCCAAGGTAGCTGGTTCCTATGCGGTTTGTCTTATACCG 477 Query 557 GCATTGTTAGCTCAAGCGGTGCAACAACCTTTGACTCGGTTTCTCCAGACTCAGGGTTTG 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 478 GCATTGTTAGCTCAAGCGGTGCAACAACCTTTGACTCGGTTTCTCCAGACTCAGGGTTTG 537 Query 617 GTTCTTCCTCTTCTCTACTGTGCCATAACCACCCTTTTGTTCCATATACCAGTTTGTTTG 676 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 538 GTTCTTCCTCTTCTCTACTGTGCCATAACTACCCTTTTGTTCCATATACCCGTTTGTTTG 597 Query 677 ATTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCCTTGGCTATTGGTTTGTCT 736 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 598 ACTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCCTTGGCTATTGGTTTCTCT 657 Query 737 TACTGGTTTAACGTCTTGATTCTTGCTTTATATGTGAGATTTTCAAGTTCTTGCGAGAAG 796 ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 658 TACTGGTTTAATGTCTTAATTCTTGCTTTATATGTGAGATTTTCAAGATCTTGCGAGAAG 717 Query 797 ACTCGCGGCTTTGTGTCTGATGATTTCGTGTTGAGTGTCAAGCAGTTTTTTCAGTATGGA 856 |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| Sbjct 718 ACTCGCGGCTTTGTATCCGATGATTTCGTGTTGAGCGTCAAGCAGTTTTTTCAGTATGGG 777 Query 857 ATACCTTCGGCAGCAATGACAACCATAGAGTGGTCATTGTTTGAGTTCCTTATATTATCT 916 ||||| || ||||||||||| ||||| || ||||| ||||||||| |||||||||| || Sbjct 778 ATACCATCAGCAGCAATGACTACCATCGAATGGTCGTTGTTTGAGCTCCTTATATTGTCC 837 Query 917 TCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAACC 976 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 838 TCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAACA 897 Query 977 TCATCTCTCCACTATGTCATTCCAATGGGTATTGGGGCGGCTGGAAGTATACGGGTTTCA 1036 ||||||||||||| |||||||||||||||||| ||||| |||||||| | |||| ||||| Sbjct 898 TCATCTCTCCACTGTGTCATTCCAATGGGTATCGGGGCTGCTGGAAGCACACGGATTTCA 957 Query 1037 AACGAATTGGGAGCGGGTAATCCCGAGGTTGCGAGGCTGGCAGTGTTTGCCGGTATATTC 1096 ||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| ||| Sbjct 958 AACGAATTGGGAGCGGGGAATCCCGAGGTTGCTAGGCTGGCAGTGTTCGCCGGTATTTTC 1017 Query 1097 CTTTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTCTTCATTTGTAGAGATATCTTC 1156 || |||||||||||||||||||||||||||||||||||||||| || | | |||||||| Sbjct 1018 CTGTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTCTTCACGTGCAAAAATATCTTC 1077 Query 1157 GGCTACGCCTTTAGCAATAGCAAAGAAGTTGTGGACTATGTCACAGAGCTATCTCCTTTG 1216 || || ||||| |||||||||||||||||||||||||||||||| ||||||||| || || Sbjct 1078 GGGTATGCCTTCAGCAATAGCAAAGAAGTTGTGGACTATGTCACGGAGCTATCTTCTCTG 1137 Query 1217 CTTTGTATCTCATTTTTGGTTGATGGATTTTCTGCAGTGCTTGGTGGGGTTGCTAGGGGA 1276 |||||| |||||||| ||||||||||||||||| ||||||||| |||||||||||||||| Sbjct 1138 CTTTGTCTCTCATTTATGGTTGATGGATTTTCTTCAGTGCTTGATGGGGTTGCTAGGGGA 1197 Query 1277 AGTGGATGGCAACATATTGGAGCTTGGGCAAATGTGGTGGCTTACTATCTCCTAGGAGCT 1336 ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1198 AGTGGGTGGCAAAATATTGGCGCTTGGGCAAATGTGGTGGCTTACTATCTCCTAGGAGCT 1257 Query 1337 CCGGTTGGACTTTTCTTAGGATTTTGGTGTCACATGAATGGTAAAGGGCTATGGATCGGT 1396 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 1258 CCGGTTGGACTTTTCTTAGGATTTTGGTGTCACATGAACGGTAAAGGGCTATGGATTGGT 1317 Query 1397 GTGGTGGTTGGGTCTACGGCGCAAGGAATCATACTAGCTATAGTCACTGCTTGCATGAGT 1456 ||||| |||||||||| ||| ||||| ||||||||||||||||| ||||||||||||||| Sbjct 1318 GTGGTCGTTGGGTCTATGGCTCAAGGCATCATACTAGCTATAGTTACTGCTTGCATGAGT 1377 Query 1457 TGGAACGAGCAGGCTGCCAAGGCAAGACAGA-GAATAGTTGTAAGAAC 1503 ||| | ||||||||||||||||||||| | | | ||||||| |||||| Sbjct 1378 TGGGAGGAGCAGGCTGCCAAGGCAAGA-ATACGGATAGTTGGAAGAAC 1424 > Ahg480060 jgi|Araly1|480060|fgenesh2_kg.3__2761__AT2G04040.1 Length=1483 Score = 662 bits (358), Expect = 0.0 Identities = 1045/1368 (76%), Gaps = 82/1368 (6%) Strand=Plus/Plus Query 167 GAGCTCAAGAACCTCAGCCGCATGG-CGCTGCCTATGGCCACCGTGACTGTTGCTCAATA 225 ||||| ||||| || |||||| ||| |||| ||||||||||||||||| ||||||| || Sbjct 83 GAGCTAAAGAAACTGAGCCGCTTGGCCGCT-CCTATGGCCACCGTGACCATTGCTCAGTA 141 Query 226 TC-TATTACCCGTTATCTCAGTCATGGTCGCCGGCCACCGCAGCGAACTCCAGCTCTCAG 284 | |||| || || ||||||||||||||||| |||||| | |||| ||||||||||| | Sbjct 142 -CTTATTGCCTGTCATCTCAGTCATGGTCGCTGGCCACAACGGCGAGCTCCAGCTCTCCG 200 Query 285 GCGTTGCTCTTGCCACTTCTTTTACAAACGT-ATCCGGCTTCAGTGTCATGTTTGGTTTA 343 | || |||||||| || || || |||||||| | |||| ||||| | |||| ||| ||| Sbjct 201 GTGTGGCTCTTGCAACCTCCTTCACAAACGTCA-CCGGTTTCAGCATTATGTGTGGATTA 259 Query 344 GCGGGTGCACTTGAAACTCTATGTGGCCAAGCTTATGGAGCAAAACAATACG-CGAAAAT 402 | |||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||| Sbjct 260 GTGGGTGCACTTGAAACTCTTTGTGGCCAAGCTTATGGAGCCAAACAATACGAC-AAAAT 318 Query 403 CGGAACTTACACTTTCTCTGCAATAGTC-TCAAACGTACCTATAGTTG-TT-CTCATATC 459 |||||||||| | | ||||||||| | | || ||| || | | | ||| || |||||||| Sbjct 319 CGGAACTTACGCATACTCTGCAATTG-CTTCCAACATAAC-A-ATTTGTTTCCTCATATC 375 Query 460 GATTCTCTGGTTTTACATGGACAAA-CTCTTTG-TTTCACTTGGACAAGATCCTGACATC 517 ||||||||| ||||||| || ||| || ||| || | || |||||||| ||||| || Sbjct 376 AATTCTCTGGCTTTACATTGA-AAAGATC-TTGATTGCTCTAGGACAAGACCCTGAAAT- 432 Query 518 TCCAAG-GTAGCTGGTTCTTACGCGGTTTGTCTTATACCGGCATTGTT-AGCTCAAGCG- 574 | |||| | ||||| || ||||| |||| || |||||| | || || || |||||| Sbjct 433 TTCAAGAATCGCTGGCTCCTACGCCTTTTGGCTCATACCGACTTTATTCGGC-CAAGCGA 491 Query 575 GTGCAACA-ACCTTTGACTCGGTTTCTCCAGACTC-AGGGTTTGGTTCTTCCTCTTCTCT 632 || || ||| || | |||||||| | ||| | |||| |||||||||||||| |||| Sbjct 492 TTG--TCATACCACTGTCCCGGTTTCTGCTGACACAAGGG-TTGGTTCTTCCTCTGCTCT 548 Query 633 ACTGTGCCATAACCACCCTTTTGTTCCATATACCAGTTTGTTTGA-TTCTGGTTTACGCG 691 | |||| | || |||||||||||||| | ||||||| || || |||||| | | Sbjct 549 TCACTGCCGTGACTACCCTTTTGTTCCACGTTTTTGTTTGTTGGACTT-TGGTTTTCTTG 607 Query 692 TTTGGTCTTGGAAGCAATGGAGCC-GCCTTGGCTATTGGTTTGTCTTACTGGTTTAACGT 750 |||||||| ||||| |||||| || ||| |||||| | || |||||| ||||||| ||| Sbjct 608 TTTGGTCTGGGAAGTAATGGA-CCTGCCATGGCTACTAGTGTGTCTTTCTGGTTTTACG- 665 Query 751 CT-TGATTCT-TGC-TTTATATGTGAGATTTTCAAGTTCTTGCGAGAAGACTCGCGGCTT 807 || |||| || | | | | ||||||| ||| || || |||||||||||||||||||| || Sbjct 666 CTGTGATACTCT-CATGT-TATGTGAAATTCTCCAGCTCTTGCGAGAAGACTCGCGGATT 723 Query 808 TGTGTCTGATGATTTCGTGT-TGAGTGTCAAGCAGTTTTTTCAGTATGGAATACCTTCGG 866 ||| || || |||| |||| | | |||||||||| || || || ||||| || || | Sbjct 724 TGTATCCGAAAATTTTGTGTCT-TCTATCAAGCAGTTCTTCCAATACGGAATCCCATCAG 782 Query 867 CAGCAATGA-CAACCATAGAGTGGTCATTGTTTGAGTTCCTTATATTAT-CTTCAGGACT 924 | ||||||| || |||| |||| | |||||| | || ||| | | | ||||| || Sbjct 783 CTGCAATGATTTGCC-TAGAATGGTGGCTATTTGAGATACTCATACTCTGC-TCAGGTCT 840 Query 925 CCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAACCTCATCTCT 984 ||||| |||||||||||||||||||||||||||||||| |||||||||| | || | Sbjct 841 TCTCCCTAACCCGAAACTCGAGACCTCTGTTCTTTCCATATGTCTTACAATAGAAACTTT 900 Query 985 CCACTATGTCATTCCAA-TGGGTATTGGG-GCGGCTG-GAAGTATACGGGTTTCAAACGA 1041 |||||||| ||| || ||| | | | ||||||| || | | ||| || |||||| | Sbjct 901 GCACTATGTGATTGCAGCTGG--AGTCGCTGCGGCTGTGA-GCACACGTGTATCAAAC-A 956 Query 1042 ATT-GGGAGC-GGGTAATCC-CGAGGTTGCGAGGCTGGCAGTGTTTGCCGGTATAT-TCC 1097 ||| |||||| ||| ||||| | || |||| ||| | |||| || || || | | || Sbjct 957 ATTTGGGAGCTGGG-AATCCTCAAG-TTGCTAGGGTTTCAGTATTAGCAGGGCTCTGTC- 1013 Query 1098 TTTGGTTCCTAGAGGCTACCATT-TGTAGCACACTTCTCTTCAT-TTGTAGAGAT-ATCT 1154 | ||| | |||| | | | || | ||||| |||||||||| || || || ||| Sbjct 1014 TCTGGATAGTAGAATC-AGCTTTCTTTAGCATACTTCTCTTCGCCTTC-AG-GAACATCA 1070 Query 1155 TCGGCTACGCCTTTAGCAATAGCAAAGAAGTTGTGGACTATGTCACAGAGCT-ATCTCCT 1213 | |||||||| || ||||| |||||||||||| ||||||||||| | || || | ||||| Sbjct 1071 TAGGCTACGCATTCAGCAACAGCAAAGAAGTTTTGGACTATGTCGCTGACCTGA-CTCCT 1129 Query 1214 TTGCTTTGTATCTCATTTT-TGGTTGATGGATTTTCTGCAGTGCTTGGTGGGGTTGCTAG 1272 ||||| ||| |||| ||| | | || || || | ||||| ||| |||||||||||| Sbjct 1130 TTGCTCTGTCTCTC-TTTCATCCTCGACGGCTTCACAGCAGTTCTTAATGGGGTTGCTAG 1188 Query 1273 GGGAAGTGGATGGCAACATATTGGAGCTTGGG-CAA-A-TGTGGTGGCTTACTATCTCCT 1329 |||||||| |||||||| |||||||||||| ||| | ||| | |||| |||||| | Sbjct 1189 AGGAAGTGGGTGGCAACACATTGGAGCTTGGAACAATACTGTT-T--CTTATTATCTCGT 1245 Query 1330 AGGAGCTCCGGTTGGACTTTTCTTAGGATTTTGGTGTCACAT-GAATGGTAAAGGGCTAT 1388 ||||||||| |||||| ||| ||||| ||| || | | ||| || ||||| || | Sbjct 1246 AGGAGCTCCTGTTGGAATTTACTTAGC-TTTCAGTCTTGGGTTGAACGGAAAAGGACTTT 1304 Query 1389 GGAT-CGGTGTGGTGGTTGGGTCTACGGCGCAAGGAA-TCATACTAGCTATAGTCACTGC 1446 || | |||||| |||||||| ||||| | |||| | | ||||| ||||| ||||| | Sbjct 1305 GG-TGCGGTGTTGTGGTTGGATCTACTGTACAAGCTACT-ATACTGGCTATTGTCACAAC 1362 Query 1447 TTGCATGAGTTGGAACGAGCAGGCTGCCAAGGCAAG-ACAGAGAATAG 1493 || ||| | |||||| || ||||||| ||||| || | ||||||||| Sbjct 1363 TTCCATAAATTGGAAGGAACAGGCTGAGAAGGCTAGGA-AGAGAATAG 1409 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62277550575 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5