BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G04170.1
Length=1576
Score E
Sequences producing significant alignments: (Bits) Value
Ahg930743 jgi|Araly1|930743|scaffold_303200.1 1445 0.0
Ahg930742 jgi|Araly1|930742|scaffold_303199.1 1445 0.0
Ahg930741 jgi|Araly1|930741|scaffold_303198.1 1445 0.0
Ahg489472 jgi|Araly1|489472|fgenesh2_kg.6__2606__AT5G26300.1 1066 0.0
Ahg942218 jgi|Araly1|942218|scaffold_602762.1 660 0.0
> Ahg930743 jgi|Araly1|930743|scaffold_303200.1
Length=938
Score = 1445 bits (782), Expect = 0.0
Identities = 876/921 (95%), Gaps = 7/921 (1%)
Strand=Plus/Plus
Query 454 AGGAATGTGGAGAGATGAGCGACCATCAAACAAGATACTGACAATAACAAGTTTCTCCGT 513
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 17 AGGAATGTGGAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAAGTTTCTCCGT 76
Query 514 GA-TCAAAGGGAGAGGAGAACCCTACGAATCCTCGGTCTTTGAGGCCGGTGGTTACAAAT 572
|| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 77 GATTC-AAGGGAGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGCCGGTGGTTACAAAT 135
Query 573 GGAGATTAGTTTTGTATGTTAATGGTAATCAAAACGATGGTGGAAATAACCATATTTCAC 632
|||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct 136 GGAGATTAGTTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAATAATCATATTTCAC 195
Query 633 TTTACGTGAGGATCGAAGAGACAGAATCTCTTCCAAAAGGCTGGGAAGTCAATGTTGAAC 692
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 196 TTTACGTGAGGATCGAAGAGACAGAATCTCTTCCAAGAGGCTGGGAAGTCAATGTTGAAC 255
Query 693 TCAAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGATTGTTAAAGATGGAATAG 752
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 256 TCAAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGACTGTTACAGATGGAATAG 315
Query 753 TGAAACGATACAATGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATTCCTCTTACAA 812
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 316 TGAAACGATACAACGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATTCCTCTTCCAA 375
Query 813 CATTCCTTGACACGAACGAAGGTTATCTTGAGCAGGACATTGCTTCTTTTGGTGCTGAGA 872
||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 376 CATTCCTTGACACGAACCAAGGTTACCTTGAGCAGGACACTGCTTCTTTTGGTGCTGAGA 435
Query 873 TCTTCAGCGGCACAGCGGTCCAAGTACAAGAGAAAGTCACATTCATATCCAACCCTCCAA 932
| |||| ||| ||| ||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 436 TTTTCATCGGTACACCGGTCCAGGTACAAGAGAAAGTCACGTTCATATCAAACCCTCCAA 495
Query 933 ACAATGTTTTCACTTGGAAGATACTTCATTTCTCTAACTTGGAAGATAAATTCTATTACT 992
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 496 ACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGATAAATTCTATTATT 555
Query 993 CTGATGATTTTCTTGTTGAAGACCGATATTGGAGATTAGGATTTAACCCAAAAGGTACTG 1052
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 556 CTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTTAACCCAAAAGGTACTG 615
Query 1053 GTGATGGAAGATCACAAGCGATCCCAATCTTCCTATATGCTCAAGGCCATAAGCCAAACG 1112
| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct 616 GAGATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAAGGTCATAAGCCAAATG 675
Query 1113 CAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAACGAAGCTCCA 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 676 CAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAACGAGGCTCCA 735
Query 1173 ACCACGCACAAATATATTCTGCAGCTTGGTACCCTACTCGAAGCGATTATGGTGTGGGAG 1232
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 736 ACCACAAACAAATATATTCTGCAGCTTGGTACCCCACTCGAAGCGATTATGGTGTGGGAG 795
Query 1233 TTAACACTATCATATCGTTAGCAGAATTCAATGATGCATCGAAAGGGTAT-TCGGTGAAT 1291
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 796 TTAACACTATCATATCGTTAGCAGAATTCAATGATGCATCGAAAGGGTATAT-GGTGAAT 854
Query 1292 GATTCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGACCAACATTGT-TCCCAT 1350
||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| |
Sbjct 855 GATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGACCAACATCGTCTCCG-T 913
Query 1351 TTAAATATCTCTA-TTCTCTA 1370
|||| |||||||| || ||||
Sbjct 914 TTAATTATCTCTACTTTTCTA 934
> Ahg930742 jgi|Araly1|930742|scaffold_303199.1
Length=938
Score = 1445 bits (782), Expect = 0.0
Identities = 876/921 (95%), Gaps = 7/921 (1%)
Strand=Plus/Plus
Query 454 AGGAATGTGGAGAGATGAGCGACCATCAAACAAGATACTGACAATAACAAGTTTCTCCGT 513
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 17 AGGAATGTGGAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAAGTTTCTCCGT 76
Query 514 GA-TCAAAGGGAGAGGAGAACCCTACGAATCCTCGGTCTTTGAGGCCGGTGGTTACAAAT 572
|| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 77 GATTC-AAGGGAGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGCCGGTGGTTACAAAT 135
Query 573 GGAGATTAGTTTTGTATGTTAATGGTAATCAAAACGATGGTGGAAATAACCATATTTCAC 632
|||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct 136 GGAGATTAGTTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAATAATCATATTTCAC 195
Query 633 TTTACGTGAGGATCGAAGAGACAGAATCTCTTCCAAAAGGCTGGGAAGTCAATGTTGAAC 692
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 196 TTTACGTGAGGATCGAAGAGACAGAATCTCTTCCAAGAGGCTGGGAAGTCAATGTTGAAC 255
Query 693 TCAAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGATTGTTAAAGATGGAATAG 752
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 256 TCAAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGACTGTTACAGATGGAATAG 315
Query 753 TGAAACGATACAATGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATTCCTCTTACAA 812
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 316 TGAAACGATACAACGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATTCCTCTTCCAA 375
Query 813 CATTCCTTGACACGAACGAAGGTTATCTTGAGCAGGACATTGCTTCTTTTGGTGCTGAGA 872
||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 376 CATTCCTTGACACGAACCAAGGTTACCTTGAGCAGGACACTGCTTCTTTTGGTGCTGAGA 435
Query 873 TCTTCAGCGGCACAGCGGTCCAAGTACAAGAGAAAGTCACATTCATATCCAACCCTCCAA 932
| |||| ||| ||| ||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 436 TTTTCATCGGTACACCGGTCCAGGTACAAGAGAAAGTCACGTTCATATCAAACCCTCCAA 495
Query 933 ACAATGTTTTCACTTGGAAGATACTTCATTTCTCTAACTTGGAAGATAAATTCTATTACT 992
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 496 ACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGATAAATTCTATTATT 555
Query 993 CTGATGATTTTCTTGTTGAAGACCGATATTGGAGATTAGGATTTAACCCAAAAGGTACTG 1052
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 556 CTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTTAACCCAAAAGGTACTG 615
Query 1053 GTGATGGAAGATCACAAGCGATCCCAATCTTCCTATATGCTCAAGGCCATAAGCCAAACG 1112
| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct 616 GAGATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAAGGTCATAAGCCAAATG 675
Query 1113 CAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAACGAAGCTCCA 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 676 CAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAACGAGGCTCCA 735
Query 1173 ACCACGCACAAATATATTCTGCAGCTTGGTACCCTACTCGAAGCGATTATGGTGTGGGAG 1232
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 736 ACCACAAACAAATATATTCTGCAGCTTGGTACCCCACTCGAAGCGATTATGGTGTGGGAG 795
Query 1233 TTAACACTATCATATCGTTAGCAGAATTCAATGATGCATCGAAAGGGTAT-TCGGTGAAT 1291
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 796 TTAACACTATCATATCGTTAGCAGAATTCAATGATGCATCGAAAGGGTATAT-GGTGAAT 854
Query 1292 GATTCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGACCAACATTGT-TCCCAT 1350
||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| |
Sbjct 855 GATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGACCAACATCGTCTCCG-T 913
Query 1351 TTAAATATCTCTA-TTCTCTA 1370
|||| |||||||| || ||||
Sbjct 914 TTAATTATCTCTACTTTTCTA 934
> Ahg930741 jgi|Araly1|930741|scaffold_303198.1
Length=938
Score = 1445 bits (782), Expect = 0.0
Identities = 876/921 (95%), Gaps = 7/921 (1%)
Strand=Plus/Plus
Query 454 AGGAATGTGGAGAGATGAGCGACCATCAAACAAGATACTGACAATAACAAGTTTCTCCGT 513
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 17 AGGAATGTGGAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAAGTTTCTCCGT 76
Query 514 GA-TCAAAGGGAGAGGAGAACCCTACGAATCCTCGGTCTTTGAGGCCGGTGGTTACAAAT 572
|| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 77 GATTC-AAGGGAGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGCCGGTGGTTACAAAT 135
Query 573 GGAGATTAGTTTTGTATGTTAATGGTAATCAAAACGATGGTGGAAATAACCATATTTCAC 632
|||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct 136 GGAGATTAGTTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAATAATCATATTTCAC 195
Query 633 TTTACGTGAGGATCGAAGAGACAGAATCTCTTCCAAAAGGCTGGGAAGTCAATGTTGAAC 692
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 196 TTTACGTGAGGATCGAAGAGACAGAATCTCTTCCAAGAGGCTGGGAAGTCAATGTTGAAC 255
Query 693 TCAAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGATTGTTAAAGATGGAATAG 752
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 256 TCAAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGACTGTTACAGATGGAATAG 315
Query 753 TGAAACGATACAATGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATTCCTCTTACAA 812
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 316 TGAAACGATACAACGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATTCCTCTTCCAA 375
Query 813 CATTCCTTGACACGAACGAAGGTTATCTTGAGCAGGACATTGCTTCTTTTGGTGCTGAGA 872
||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 376 CATTCCTTGACACGAACCAAGGTTACCTTGAGCAGGACACTGCTTCTTTTGGTGCTGAGA 435
Query 873 TCTTCAGCGGCACAGCGGTCCAAGTACAAGAGAAAGTCACATTCATATCCAACCCTCCAA 932
| |||| ||| ||| ||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 436 TTTTCATCGGTACACCGGTCCAGGTACAAGAGAAAGTCACGTTCATATCAAACCCTCCAA 495
Query 933 ACAATGTTTTCACTTGGAAGATACTTCATTTCTCTAACTTGGAAGATAAATTCTATTACT 992
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 496 ACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGATAAATTCTATTATT 555
Query 993 CTGATGATTTTCTTGTTGAAGACCGATATTGGAGATTAGGATTTAACCCAAAAGGTACTG 1052
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 556 CTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTTAACCCAAAAGGTACTG 615
Query 1053 GTGATGGAAGATCACAAGCGATCCCAATCTTCCTATATGCTCAAGGCCATAAGCCAAACG 1112
| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct 616 GAGATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAAGGTCATAAGCCAAATG 675
Query 1113 CAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAACGAAGCTCCA 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 676 CAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAACGAGGCTCCA 735
Query 1173 ACCACGCACAAATATATTCTGCAGCTTGGTACCCTACTCGAAGCGATTATGGTGTGGGAG 1232
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 736 ACCACAAACAAATATATTCTGCAGCTTGGTACCCCACTCGAAGCGATTATGGTGTGGGAG 795
Query 1233 TTAACACTATCATATCGTTAGCAGAATTCAATGATGCATCGAAAGGGTAT-TCGGTGAAT 1291
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 796 TTAACACTATCATATCGTTAGCAGAATTCAATGATGCATCGAAAGGGTATAT-GGTGAAT 854
Query 1292 GATTCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGACCAACATTGT-TCCCAT 1350
||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| |
Sbjct 855 GATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGACCAACATCGTCTCCG-T 913
Query 1351 TTAAATATCTCTA-TTCTCTA 1370
|||| |||||||| || ||||
Sbjct 914 TTAATTATCTCTACTTTTCTA 934
> Ahg489472 jgi|Araly1|489472|fgenesh2_kg.6__2606__AT5G26300.1
Length=1053
Score = 1066 bits (577), Expect = 0.0
Identities = 798/903 (88%), Gaps = 21/903 (2%)
Strand=Plus/Plus
Query 456 GAATGTGGAGAGATGAGCGACCATCAAACAAGATACTGACAATAACAAGTTTCTCCGTGA 515
|||||| |||||| ||||||||||| | |||||| ||||||||||||| ||||| ||||
Sbjct 155 GAATGTTGAGAGAAGAGCGACCATCGAGTAAGATAGTGACAATAACAAGCTTCTCAGTGA 214
Query 516 TCAAAGGGAGAGGAGAACCCTACGAATCCTCGGTCTTTGAGGCCGGTGGTTACAAATGGA 575
| | ||| |||||||||||||| |||||||| || |||||||| | ||||||||||||||
Sbjct 215 TTAGAGGCAGAGGAGAACCCTATGAATCCTCTGTTTTTGAGGCTGCTGGTTACAAATGGA 274
Query 576 GATTAGTTTTGTATGTTAATGGTAATCAAAACGATGGTGGAAATAACCATATTTCACTTT 635
|||| || ||||| || |||||||||| |||||| ||||||||| | |||||||||||||
Sbjct 275 GATTGGTATTGTACGTGAATGGTAATCCAAACGACGGTGGAAATGATCATATTTCACTTT 334
Query 636 ACGTGAGGATCGAAGAGACAGAATCTCTTCCAAAAGGCTGGGAAGTCAATGTTGAACTCA 695
| | |||||||||||||||||||||||||||| |||||||||||| |||||||| ||||
Sbjct 335 ATGCGAGGATCGAAGAGACAGAATCTCTTCCAGTAGGCTGGGAAGTGAATGTTGATCTCA 394
Query 696 AACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGATTGTTAAAGATGGAATAGTGA 755
|||||||||||||||||||||||||| ||| ||||||| ||||| ||||||| ||||||
Sbjct 395 AACTCTTTGTCTACAATGGGAAGCAATACAAATATTTGACTGTTACAGATGGATTAGTGA 454
Query 756 AACGATACAATGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATTCCTCTTA-CAACA 814
| |||||||| |||| ||||||||||||||||||||| |||||||||||| | |||||
Sbjct 455 AGCGATACAACAATGCTAAAAAAGAGTGGGGATACGGACAATTGATTCCTC-AATCAACA 513
Query 815 TTCCTT--GACACGAACGAAGGTTATC-TTGAGCAGGACATTGCTTCTTTTGGTGCTGAG 871
|| || ||||||||||||| || | |||||||||||| || ||||||||||||||||
Sbjct 514 TT--TTACAACACGAACGAAGGGTA-CATTGAGCAGGACACTGGTTCTTTTGGTGCTGAG 570
Query 872 ATCTTCAGCGGCA-CAGCGGTCCAAG-TACAAGAGAAAGTCACATTCATATCCAACCCTC 929
||||||| || | | ||| || || |||||||||||||||||||||||| |||||||
Sbjct 571 ATCTTCATCGTTAGC-CCGG-CCCAGCAACAAGAGAAAGTCACATTCATATCAAACCCTC 628
Query 930 CAAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTAACTTGGAAGATAAATTCTATT 989
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 629 CTAACAATGTTTTCACTTGGAAGATACTTCGTTTCTCTAACTTGGAAGATAAATTCTATT 688
Query 990 ACTCTGATGATTTTCTTGTTGAAGACCGATATTGGAGATTAGGATTTAACCCAAAAGGTA 1049
||||||| |||||||| |||||||||||||| |||||| ||||||||||||| ||||| |
Sbjct 689 ACTCTGACGATTTTCTCGTTGAAGACCGATACTGGAGACTAGGATTTAACCC-AAAGGGA 747
Query 1050 -CTGG-TGATGGAAGATCACAAGCGA-TCCCAATCTTCCTATATGCTCAAGGCCATAAGC 1106
||| || |||||| |||| || | | ||||||||||||| ||||||||||||||||
Sbjct 748 GATGGAGGA-GGAAGACCACATGC-ACTTCCAATCTTCCTATTTGCTCAAGGCCATAAGG 805
Query 1107 CAAACGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAACGAA 1166
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 806 CAAACGCAGTTGTTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAACGAA 865
Query 1167 GCTCCAACCAC-GCACAAATATATTCTGCAGCTTGGTACCCTACTCGAAGCGATTATGGT 1225
|| || ||||| | ||||||||||||||||||||||||||| | |||||||| |||||||
Sbjct 866 GCACCGACCACAG-ACAAATATATTCTGCAGCTTGGTACCCGATTCGAAGCGGTTATGGT 924
Query 1226 GTGGGAGTTAACACTATCATATCGTTAGCAGAATTCAATGATGCATCGAAAGGGTATTCG 1285
|||||||| |||| |||||||| ||||||||| || || ||||||||||||||||||| |
Sbjct 925 GTGGGAGTGAACAATATCATATTGTTAGCAGATTTAAACGATGCATCGAAAGGGTATTTG 984
Query 1286 GTGAATGATTCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGACCAACATTGT- 1344
||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct 985 GTGAATGATGCCATTATCTTTGAAGCTGAAATGGTTAAGGTCTCTGTAACCAACATCGTC 1044
Query 1345 TCC 1347
|||
Sbjct 1045 TCC 1047
> Ahg942218 jgi|Araly1|942218|scaffold_602762.1
Length=1028
Score = 660 bits (357), Expect = 0.0
Identities = 748/930 (80%), Gaps = 54/930 (6%)
Strand=Plus/Plus
Query 459 TGTGGAGAGATGAGCGACCATCAAACAAGATACTGACAATAACAAGTTTCTCCGTGATCA 518
||||||| ||||||| |||| | | ||||| ||| |||||||||| ||||| | ||
Sbjct 130 TGTGGAGGGATGAGCCACCAGCGGATAAGATTCTGTCAATAACAAGCTTCTCAATAAT-- 187
Query 519 AAGGGAG-AGGA--GAACCCTACGAATCCTCGGTCTTTGAGGCCGGTGGTTACAAATGGA 575
| |||| | | | |||||| | |||||| || |||||||| | ||||||||||||||
Sbjct 188 TA-GGAGCATAATGGCACCCTATGTATCCTCTGTTTTTGAGGCTGCTGGTTACAAATGGA 246
Query 576 GATTAGTTTTGTATGTTAATGGTAATCAAAACGATGGTGGAAATA-ACCATATTTCACTT 634
|||| |||||||| |||||||| ||| |||| |||||||| | | ||| ||||||||
Sbjct 247 GATTGGTTTTGTACACGAATGGTAAACAAGACGACGGTGGAAA-AGATCATGTTTCACTT 305
Query 635 TACGTGAGGATCGAAGAGACAGAATCTCTTCCAAAAGGCTGGGAAGTCAATGTTGAACTC 694
|||| |||||||| |||||||||||||||||||| |||||||||||| |||||||| |||
Sbjct 306 TACGCGAGGATCGTAGAGACAGAATCTCTTCCAATAGGCTGGGAAGTGAATGTTGATCTC 365
Query 695 AAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGATTGTTAAAGATGGAATAGTG 754
||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||| |||||
Sbjct 366 AAACTCTTTGTCTACAATGGGAAGCAAAACAAATATTTGACTGTTACAGATGGATTAGTG 425
Query 755 AAACGATACAATGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATTCCTCTTA-CAAC 813
|| |||||||| |||| |||||||||| ||||| |||| || | ||||||| | ||||
Sbjct 426 AAGCGATACAACAATGCTAAAAAAGAGTTGGGATTCGGACAACTAATTCCTC-AATCAAC 484
Query 814 ATTCCT-TGACACGAACGAAGG-TTATCTTGAGCAGGACATTGCTTCTTTTGGTGCTGAG 871
|| || ||| |||||| || || | ||||||||||| || | |||||||||| |||
Sbjct 485 -TTACTACGACGGGAACGATGGATT-CCGTGAGCAGGACACTGGTACTTTTGGTGCCGAG 542
Query 872 ATCTTCAGCGGCACAGCGGTCCAA-GTACAAGAGAAAGTCACATTCATATCCAACCCTCC 930
|||| || || | | |||||||| || |||||||||||||||||||||| ||||||||
Sbjct 543 ATCTCCATCGTTA-ACCGGTCCAACCTAAAAGAGAAAGTCACATTCATATCAAACCCTCC 601
Query 931 AAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTAACTTGGAAGATAAATTCTATTA 990
| ||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| |
Sbjct 602 AGACAATATTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGATAAAATCTATAA 661
Query 991 CTCTGATGATTTTCTTGTTGAAGACCGATATTGGAGATTAGGATTTAACCCAAAAGGTAC 1050
||||| || |||||||||| ||||||||| |||| ||||||||||||||| ||||| |
Sbjct 662 ATCTGACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGATTTAACCCGAAAGG-A- 719
Query 1051 TGGTGATGGAAGATCACAAGCGATCCCAATCTTCCTATATGCTCAAGGCCATAAGCCAAA 1110
||| | | | || ||| | | | | || |||||||||||| |||| ||||
Sbjct 720 -GGTT-T--A-G-TCCCAATC--T---A-T-TT---ATATGCTCAAGGATTTAAGGCAAA 763
Query 1111 CGCAGTTGCTA-CAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAACGAAGCT 1169
|||||||| | ||| ||||| ||||| | |||||||||||||||||||||||||| |
Sbjct 764 CGCAGTTGA-AGCAACCACTTATGGAGCAGCTAATCTGCGGTTAAAGAATCAACGAAACA 822
Query 1170 CCAACCACGCACAA-AT-ATATT-CTGCAGCTTGGTACCCTACT-CGAAGCG-ATTATGG 1224
|||||||| | || || || || ||| | |||||||| | | | ||||| || | ||
Sbjct 823 CCAACCAC--ATAACATCAT-TTACTGAATATTGGTACC-TGGTTCTAAGCGGAT-ACGG 877
Query 1225 TGTGGGAGTTAACACTATCATATCGTTAGCAGAAT-TCAATGATGCATCGAAAGGGTATT 1283
| ||||||| || ||||| | | |||||||| | | || |||||||||||||| ||||
Sbjct 878 TTTGGGAGTGAATACTAT-AC--CATTAGCAGA-TGTAAAGGATGCATCGAAAGGATATT 933
Query 1284 CGGTGAATGATTCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGACCAACATTG 1343
|||||||||| ||||||| |||||||||||||| | | |||||||||||| ||| | |
Sbjct 934 TGGTGAATGATGCCATTATAATTGAAGCTGAAATGCTTACGGTCTCTGTGACGAACCTCG 993
Query 1344 T-TCCCATTTAAATATCTCTA-TTCTCTAC 1371
| ||| |||||| ||||||| |||| |||
Sbjct 994 TCTCCG-TTTAAAGATCTCTACTTCTTTAC 1022
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59039879750
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5