BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G04810.1 Length=1194 Score E Sequences producing significant alignments: (Bits) Value Ahg930800 jgi|Araly1|930800|scaffold_303257.1 1423 0.0 Ahg480113 jgi|Araly1|480113|fgenesh2_kg.3__2814__AT2G04840.1 736 0.0 Ahg342808 jgi|Araly1|342808|fgenesh1_pg.C_scaffold_3002571 516 2e-145 Ahg936150 jgi|Araly1|936150|scaffold_500341.1 167 2e-40 Ahg936152 jgi|Araly1|936152|scaffold_500343.1 119 5e-26 > Ahg930800 jgi|Araly1|930800|scaffold_303257.1 Length=1223 Score = 1423 bits (770), Expect = 0.0 Identities = 1063/1199 (89%), Gaps = 41/1199 (3%) Strand=Plus/Plus Query 21 GATGAGA-AAGAATAAGAGACAAAAAGTGTCTAGAAATAGTGATTGGTCCAAGCTTTGTC 79 ||||| | ||||| ||||||||||||||| ||| |||| | ||||||||||||||||||| Sbjct 21 GATGA-ATAAGAAGAAGAGACAAAAAGTGCCTAAAAATGGCGATTGGTCCAAGCTTTGTC 79 Query 80 CCGATGTTTTGCGGAAGATATACGAAACCTTAAGGAGCCCTGTTGATTCTCACCGCGCAA 139 ||||||||||||| ||||||| |||||||||||| |||||||||||||| |||||||||| Sbjct 80 CCGATGTTTTGCGAAAGATATTCGAAACCTTAAGCAGCCCTGTTGATTCCCACCGCGCAA 139 Query 140 AAATCGTTTGCTCGAATTGGTATTCCGTTTGGAAAACATGCGTGAAGAGGCCTCTATGTC 199 |||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||| Sbjct 140 AAATCGTTTGCTCGGGTTGGTATTCCGTTTGGAAAACATGCGCAAAGAGGCCTCCATGTC 199 Query 200 CACTGAGGATAATTCACCAAGGCGATTCTCCCACCGTAGGAGACGGCAACAGAAAACTCA 259 || |||||||||| |||||||| |||||||||||| ||||| | ||||||||||||||| Sbjct 200 CATTGAGGATAATACACCAAGGTGATTCTCCCACCTTAGGAAAAGGCAACAGAAAACTCG 259 Query 260 TGGGATTC-TCCTA-CA-A-CAGCTATTGTATGGCTAGCTCCGGAAACTGGCTCCTGATG 315 | ||| || ||| | || | |||||||||||||||||||||||||||||||| |||||| Sbjct 260 TCGGACTCTTCC-AGCACAGAAGCTATTGTATGGCTAGCTCCGGAAACTGGCTTCTGATG 318 Query 316 GTTGATCGTT-GTCTCAAATTCTATATTTATAACTTGTTGACGAAGGAAAGGATCGATCT 374 ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 319 GTTGAGC-TTCGTCTCAAATTCTATATTTATAACTTGTTGACGAAGGAAAGGATCGATCT 377 Query 375 TCCATCGATGGAGTCAAAAATACGTGGCGGGCAAGTAAGCTTCAAATCT--AAAAGCAAC 432 ||||||||||||||| |||||| ||||||||||||||| |||||| || || || || Sbjct 378 TCCATCGATGGAGTCGCAAATACTTGGCGGGCAAGTAAGGTTCAAACCTGGAAGAG-AA- 435 Query 433 AATTACAATTTTGGATACTTGGTCGGGCCTTCTCGTAAGGATGATATAGTGCCGTATGAC 492 ||| | | ||||||||||||||||||||||||| ||| |||| |||||||| |||| Sbjct 436 TATTTCCA---TGGATACTTGGTCGGGCCTTCTCGT-AGG--GATAAAGTGCCGTTTGAC 489 Query 493 TATGAAGCCGTTGAATGGAAAAAATCATTAGCTGTTCTGTGGGTAGACGAGACAACAGGA 552 |||||||||||||||||| | ||||| |||||||||||||||||| |||| |||||||| Sbjct 490 TATGAAGCCGTTGAATGGGAGAAATCGTTAGCTGTTCTGTGGGTAAACGACACAACAGGG 549 Query 553 GATTATG-CAGTTGCTTGGACTTTTATGCGACAATACTTGTTCTCATACATAAAAGGAGA 611 ||||||| | ||||||||||||||||| | | |||| |||||||||||||| |||||||| Sbjct 550 GATTATGTC-GTTGCTTGGACTTTTATACAAAAATATTTGTTCTCATACATGAAAGGAGA 608 Query 612 TTATTCTTGGTGTA-ATCTGAA-TCATAATGGGAAAAGTTTGGTTTTGTTTGATATGGCT 669 | || |||| | | || |||| || |||||| ||||||||||||||||||||||||||| Sbjct 609 TGGTTTTTGGCG-AGATTTGAATTC-TAATGGAAAAAGTTTGGTTTTGTTTGATATGGCT 666 Query 670 TGTGAGAACAATAAGCTTTATTTGTTGACAATGGATCATCACATCAAGATTTTCAATTTC 729 |||||| ||| || ||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 667 TGTGAGGACAGTATGCTTTATCTGTTGACAATTGATCATCACATCAAGATTTTCAATTTC 726 Query 730 TATGGAGATTTTTTAACAGGAGAACAAAACC-----T---GT-ATCCGTTTAACTTCGTT 780 | ||||||| |||| |||||| ||||||||| | || |||||||||||||||| Sbjct 727 TTTGGAGATATTTTCACAGGAAAACAAAACCGGTATTGGGGTCGTCCGTTTAACTTCGTT 786 Query 781 GAGGATCCGTCGGAATACGTTTGGAAGAGGAAGATAGTGATTCGGAGATCAGGAGAGGTA 840 | | | |||| ||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 787 GCGCAACCGTGGGAATACGTTTGGAAGAGGAAAATGGTGATTCGGAGATCAGGAGAGGTA 846 Query 841 CTGATAGTCTTGAGCTTGaaaa-aaaaaGTGCAAAATGAAGAGAAACTTTTGTTTTACAT 899 ||||||||||||||||| |||| |||||||| |||| ||||||||||||||||||||||| Sbjct 847 CTGATAGTCTTGAGCTT-AAAAGAAAAAGTGAAAAAGGAAGAGAAACTTTTGTTTTACAT 905 Query 900 CTTTAAGATGAATCTTGAGAGTCGCAAGTGGGAAAGAGTTTATTGTATTGGAGATGAGAT 959 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct 906 CTTTAAGATGAATCTTGAGAGTTGCAAGTGGGAAAGAGTTTATTCTATTGGAGATGAGAT 965 Query 960 GTTGATTTTTGGTCGTGGGGTTACAG--C-TCTTGCTCTTGAAGATCTTGATGATGGGAT 1016 ||||| |||||||||||||||||||| | |||||||||| ||||||||| ||||| || Sbjct 966 GTTGAGTTTTGGTCGTGGGGTTACAGTACCTCTTGCTCTTAAAGATCTTGGGGATGGAAT 1025 Query 1017 AAAGAGTAATTCAATCTATTTCGTCGGCGAAGATGTTTGGCCAGATCATCAAGAACATGA 1076 |||||| ||||||||| ||| || | |||||| ||||||||||||||| |||| ||||| Sbjct 1026 CAAGAGTGATTCAATCTGTTTTGTTGACGAAGACGTTTGGCCAGATCATAAAGATCATGA 1085 Query 1077 GCATCGTGTTTCAAATTGCGGTTTCTTCGATATTGCCACAAGTAAGATCGAATGGCCTAA 1136 || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1086 TCACCGTGTTTCAAATTGCGGTGTCTTCGATATTGCCACAAGTAAGATCGAATGGCCTAA 1145 Query 1137 GAAAATCTATTGTTTCATTAATCAAAA-TCAGTGGTTTGTTGGGGGAGTTGCTTATTAG 1194 ||| |||||||||||||||||| |||| ||| ||||||||| ||||||||||||| ||| Sbjct 1146 GAAGATCTATTGTTTCATTAAT-AAAACTCACTGGTTTGTTCGGGGAGTTGCTTACTAG 1203 > Ahg480113 jgi|Araly1|480113|fgenesh2_kg.3__2814__AT2G04840.1 Length=1197 Score = 736 bits (398), Expect = 0.0 Identities = 787/963 (82%), Gaps = 73/963 (8%) Strand=Plus/Plus Query 279 CTATTGTATGGCTAGCTCCGGAAACTGGCTCCTGATGGTTGATCGTTGTCTCAAATTCTA 338 ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct 261 CTATTGTATGGCTAGCTCCGGAAACTGTCTCCTGATGGTTGATCGTCGTCTCAAATTCTC 320 Query 339 TATTTAT-AAC-TTGTTGAC-GAAGGAAAGGATCGATCTTCCATCGATGGAGTCAAAAAT 395 ||||| | ||| || ||||| | ||| ||||||| |||||||||| ||||||| | | || Sbjct 321 TATTT-TGAACATT-TTGACAGGAGG-AAGGATCAATCTTCCATCAATGGAGTTACATAT 377 Query 396 ACGTGGCGGGCAAGTAAGCTTCAAATCTAAAAGCAACAAT--TAC-A--ATTTTGGATAC 450 |||||| | ||||||| ||||||| || |||| | ||| | | | ||| ||||| | Sbjct 378 ACGTGGAAGACAAGTAACCTTCAAACCTGAAAG--AGAATGGTCCGATGATTCTGGATGC 435 Query 451 TTGGTCGGGCCTTCTCGTAAGGATGATATAGTGC-CGTATGACTATGAAGCCGTTGAATG 509 || ||||| ||| |||||| ||| | || || | ||||||| | ||| | || ||||| Sbjct 436 TTCTTCGGGTCTTATCGTAATGAT-A-AT-GT-CTCGTATGAATTTGATTCTGTCGAATG 491 Query 510 GAAAAAATCATTAGCTGTTCTGTGGGTAGACGAGACAACAGGAGATTATG-CAGTTGCTT 568 |||||| || |||||||||| ||| || ||||||||||||| ||||||| | ||||||| Sbjct 492 GAAAAACTCGGTAGCTGTTCTATGGATAAACGAGACAACAGGGGATTATGTC-GTTGCTT 550 Query 569 GGACTTTTATGCGA-CAATACTTGTTCTCATACATA-AAAGGAGATTATTCTTGGTGTAA 626 |||| || || | | || |||||||||||||||| | |||||||||| |||||||||||| Sbjct 551 GGACATTCATAC-AGCATTACTTGTTCTCATACA-AGAAAGGAGATTCTTCTTGGTGTAA 608 Query 627 TCTGAATCATAATGGGAAAAGTTTGGTTTTGTTTGATATGGCTTGTGAGAACAATAAGCT 686 ||| ||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct 609 TCTAAATCACAATGGGAAAAGGTTGGTTTCGTTTGATATGGCTTGTGAGAACAATAAGCT 668 Query 687 TTAT-TTGT-TGACA-ATGGATCATCACATCAA-GATTTTCAATTTCTATGGAGATTTTT 742 |||| || | | || | |||||||||| || |||||| |||||| ||||| ||||| Sbjct 669 TTATCTT-TACG-CAGCT-AATCATCACAT-AAGGATTTTTGATTTCTCTGGAG-TTTTT 723 Query 743 ----TA-ACAGGAGAA-C-AAAA-CC----T-G---TATCCGTTTAACTTC-GTTGAGGA 785 || | | || || | |||| || | | |||||||||||| | |||||||| Sbjct 724 CCCATAGAAAAGAAAACCGAAAACCCGTATTCGAAATATCCGTTTAAC-GCGGTTGAGGA 782 Query 786 TCCGTCG-GAATACGTTTGGAAGAGGAAGATAGTGATTC-G-GA-GATCAGGAGAGGTAC 841 |||| | |||||||||||||||||||| |||| ||||| | | |||||| ||||| Sbjct 783 ACCGT-GCGAATACGTTTGGAAGAGGAAAATAGCGATTCAGAAATCATCAGGTGAGGTTT 841 Query 842 TGAT-AGTCTTGAG-CTTGaaaaaaaaaG---TGCAAAATGAAGAGAAACTTTTGTTTTA 896 |||| | ||||||| ||| ||| || | || || |||||||||||||||||||| Sbjct 842 TGATCA-TCTTGAGCCTT--AAACAAGTGTTTTG-TGAA-GAAGAGAAACTTTTGTTTTA 896 Query 897 CATCTTTAAGATGAATCTTGAGAGTCGCAAGTGGGAAAGAGTTTATTGTATTGGAGATGA 956 ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 897 CATCTTTAAGATGAATCTTGAGAGTTGCAAGTGGGAAAGAGTTTATTCTATTGGAGATGA 956 Query 957 GATGTTGATTTTTGGTCGTGGGGTTACA---GCT-CTTGCTCTTGAAGATCTTGATGATG 1012 ||||||| ||||||||| || |||||| ||| || |||||| ||||||||| | ||| Sbjct 957 GATGTTGGTTTTTGGTCAAGGTGTTACAATAGCTACT-GCTCTTAAAGATCTTGGTCATG 1015 Query 1013 GGATAAAGAGTAATTCAATCTATTTCGTCGGCGA-AGATGTTTGGCCAGATCATCAAGAA 1071 | || |||||| ||||| ||| ||| ||| | | ||| || ||||||||||||||||| Sbjct 1016 GAATCAAGAGTGATTCAGTCTCTTTTATCGAC-ACAGACGTCTGGCCAGATCATCAAGAT 1074 Query 1072 CATGAGCATCGTGTTTCAAATTGCGGTTTCTTCGATATTGCCACAAGTAAGATCGAATGG 1131 ||||| ||||||||||| | ||||||| ||||| ||||| | |||||||||||||||||| Sbjct 1075 CATGATCATCGTGTTTCGAGTTGCGGTGTCTTCCATATTACTACAAGTAAGATCGAATGG 1134 Query 1132 CCTAAGAAAATCTATTGTTTCATTAATCAAAATCAGTGGTTTGTTGGGGGAGTTGCTTAT 1191 ||||||||||||||||||| ||| ||| ||| |||||||| |||| ||||| |||||||| Sbjct 1135 CCTAAGAAAATCTATTGTTCCATAAATGAAACTCAGTGGTATGTTCGGGGATTTGCTTAT 1194 Query 1192 TAG 1194 ||| Sbjct 1195 TAG 1197 > Ahg342808 jgi|Araly1|342808|fgenesh1_pg.C_scaffold_3002571 Length=654 Score = 516 bits (279), Expect = 2e-145 Identities = 486/579 (84%), Gaps = 41/579 (7%) Strand=Plus/Plus Query 647 GTTTGG-TTTTGTTTGATATGGCTTGTGAGAACAATAAGCTTTATTTGTTGACAATG-GA 704 |||||| | || || ||||||||||||||||| | ||| |||||| | || |||| | || Sbjct 86 GTTTGGATGTT-TTGGATATGGCTTGTGAGAAGAGTAAACTTTATCTCTTCACAA-GTGA 143 Query 705 TCATCACATCAAGA-TTTTCAATTTCTATGGAGATTT-TTTAACAGGA-GAACAAAA-CC 760 | |||||||||||| |||| |||||||||||| ||| | | | || ||| |||| || Sbjct 144 TTATCACATCAAGAGTTTT-TATTTCTATGGAGGTTTCCCT-ATA-GAGGAAGAAAACCC 200 Query 761 ----T-G--T-ATCCGTTTAACTTCGTT-GAGGATCCGTCGGAATACGTTTGGAAGAGGA 811 | | | ||||||||||||| ||| || || || | ||||| ||||||| ||||| Sbjct 201 GTATTCGAATCATCCGTTTAACTTTGTTGGA-GAGCCTTGGGAATCCGTTTGGGGGAGGA 259 Query 812 AGATAGTGATTCGGAGATCAGGAGAGGTACTGATAGTCTTGAGCTTGaaaa-aaaaaGTG 870 | |||| |||||||||||||| ||||||||| |||||||||||||| |||| |||||||| Sbjct 260 AAATAGCGATTCGGAGATCAGAAGAGGTACTTATAGTCTTGAGCTT-AAAAGAAAAAGTG 318 Query 871 CAAAATGAAGAGAAACTTTTGTTTTACATCTTTAAGATGAATCTTGAGAGTCGCAAGTGG 930 ||||| |||| ||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 319 AAAAATAAAGAAAAACTTTTGTTTTACATCTTTAAGATGAATCTTGAGAATTGCAAGTGG 378 Query 931 GAAAGAGTTTATTGTATTGGAGATGAGATGTTGATTTTTGGTCGTGGGGTTACAG--C-T 987 |||||| |||||| ||||||||||||||| ||||||| |||||||||||||||| | | Sbjct 379 GAAAGAATTTATTCTATTGGAGATGAGATATTGATTTATGGTCGTGGGGTTACAATACCT 438 Query 988 CTTGCTCTTGAAGATCTTGATGATGGGATAAAGAGTAATTCAATCTATTTCGTCGG-CGA 1046 ||||||||| ||||||||| | | || || |||||| |||||||||||||||| || ||| Sbjct 439 CTTGCTCTTAAAGATCTTGGTCACGGAATCAAGAGTGATTCAATCTATTTCGT-GGACGA 497 Query 1047 AGATGTTTGGCCAGATCATCAAGA------A---CATGA-GCATCGTGTTTCAAATTGCG 1096 ||||||||||||||||||| |||| | ||| | | ||| |||||||||||||| Sbjct 498 AGATGTTTGGCCAGATCATAAAGATTGGCCAGATCATAAAG-ATCATGTTTCAAATTGCG 556 Query 1097 GTTTCTTCGATATTGCCACAAGTAAGATCGAATGGCCTAAGAAAATCTATTGTTTCATT- 1155 || |||||||||||||||||||||||||| ||||||||||||| ||||||| |||| || Sbjct 557 GTGTCTTCGATATTGCCACAAGTAAGATCAAATGGCCTAAGAAGATCTATT-TTTCCTTT 615 Query 1156 AATCAAAATCAGTGGTTTGTTGGGGGAGTTGCTTATTAG 1194 ||| ||||||||||||||||| ||||||||||||||||| Sbjct 616 AATAAAAATCAGTGGTTTGTTCGGGGAGTTGCTTATTAG 654 > Ahg936150 jgi|Araly1|936150|scaffold_500341.1 Length=1187 Score = 167 bits (90), Expect = 2e-40 Identities = 581/801 (73%), Gaps = 101/801 (13%) Strand=Plus/Plus Query 445 GGATACTTGGTCGGGCCTTCTCGTAAGGATGATATAGTGCCGTATGACTATGAAGCCGTT 504 ||| |||| |||| ||||| |||||||||| | || ||| || | ||| || | || Sbjct 411 GGACACTTTGTCGAGCCTTGTCGTAAGGAT-A-AT-GTGTCGAAAGAC-AT-----C-TT 460 Query 505 G-AATGGAAAAAATCATTAGCTGTTCTGTGGGTAGACGAGACAACAGGAGATTATG-CAG 562 | | || |||| |||| || |||||||||| || |||||| |||||| ||||||| | | Sbjct 461 GCACTGCAAAAGATCAGGAGTTGTTCTGTGGATAAACGAGAGAACAGGGGATTATGTC-G 519 Query 563 TTGCTTGGACTTTT-ATGCGACAATACTTGTTCTCATACATA-AAAGGAGATTATTCTTG 620 ||||||||| |||| | || || ||||||||| |||||| | ||||||||| |||| || Sbjct 520 TTGCTTGGA-TTTTGAAACGGCATTACTTGTTCACATACA-AGAAAGGAGATGATTCGTG 577 Query 621 GTGTAATCT-GAAT---CA-T--A--A----TGGGAAAAGTTT-GGTTTTGTTTGATATG 666 ||| ||| | |||| | | | | || ||||| ||| |||| | || ||| || Sbjct 578 GTGGAAT-TGGAATAAGGATTGGATTACCGGTGCGAAAAATTTGGGTTAT-TTGGATGTG 635 Query 667 GCTTGTGAGAACAATAAGCTTTATTTGTTGACAATGGATCATCACATCAAGATTTTCAAT 726 |||| | |||||| |||||||||| | | || | ||| | |||||||||||| || || Sbjct 636 GCTTATAAGAACAGTAAGCTTTATCTCTACACCACCGATAACCACATCAAGATTATCGAT 695 Query 727 TTCTATGGAGATTT-TTTAACAGG-AG-AA-C---AA-AACCTGTATC-CGTTTA-AC-- 774 |||| ||||||||| | | ||| || || | || |||| ||||| | | | | Sbjct 696 TTCTCTGGAGATTTCCCT-A-AGGAAGAAATCGAAAATAACCCGTATCTGGATCATCCTT 753 Query 775 TTCGTTGAGGAT-C-CGTCGGA-AT-ACG-T--TTGGAAGAGGAAG-ATAGTGATTCGGA 826 || | | | | | ||| ||| | | | | || ||||||| || |||| |||| || Sbjct 754 TTAACT-ATGCTCCGCGT-GGATGTGAAGTTACTTCGAAGAGG-AGAATAGCCATTCAGA 810 Query 827 GATCAGGAGAGGTACTGAT-AGTCTTGAGCTTGaaaaaaaaaGTGCAAAATGAAGAG-AA 884 |||||||||||| |||| | |||||| || | | || || |||| || || Sbjct 811 AATCAGGAGAGGTTTTGATCA-TCTTGA-ATT-TAGTACTAATTG----GTGAA-AGCAA 862 Query 885 ACTTTTGTTTTACATCTTTAAGATGAATCTTGAGAGTCGCAAGTGGGAAAGAGTTTATTG 944 ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| | | Sbjct 863 ACTTTTGTTTTACATCTTTAAGATGAATCTTGAGAGTGGCAAATGGGAAAGAGTGCAATC 922 Query 945 TATTGGAGATGA-GA--TGTTGATTTTTGGTCGTGGGGTTACAGCTCTT-GCTC---TTG 997 |||||||||||| || ||||||| ||||||| |||||||||| | || | || Sbjct 923 TATTGGAGATGATGAGATGTTGATCTTTGGTCATGGGGTTACAA-TAAGAGCACCGGTTC 981 Query 998 AAGATCTTGATGATGGGATAAAGAGTAATTCAATCTATTTCGTCGGCGAAGATGTTTGGC 1057 ||||| ||| ||| || || |||||| ||| |||| |||||||| ||| | || || Sbjct 982 AAGATGTTGGTGACGGAATCAAGAGTGGTTCTATCTTTTTCGTCGACGAT-A-GT--GGT 1037 Query 1058 CAGATCATCAAGAACATGAGC-ATCGT-GTT-T-CAAATTGCGGTTTCTTCGATATTGCC 1113 | | || | || || | ||||| ||| | || |||||||| |||| ||||||||| Sbjct 1038 C---T--TCGGG--CA-GA-CTATCGTTGTTATTCAGATTGCGGTATCTTTGATATTGCC 1088 Query 1114 ACAAGTAAGA-TCGAATGGCCTAAGAAAAT-CTATTGT-TTCATTAATCAAAA-TCAGTG 1169 ||||||| || | ||||||||||| || | | |||| || || || |||| ||| || Sbjct 1089 ACAAGTA-GAATTAAATGGCCTAAGCAATTTC-ATTGCCTT-ATGGAT-AAAAGTCATTG 1144 Query 1170 GTTTGTTGGGGGAGTTGCTTA 1190 ||||| | ||| ||||||| Sbjct 1145 GTTTGCTCCAGGATTTGCTTA 1165 > Ahg936152 jgi|Araly1|936152|scaffold_500343.1 Length=1216 Score = 119 bits (64), Expect = 5e-26 Identities = 420/578 (73%), Gaps = 79/578 (14%) Strand=Plus/Plus Query 522 AGCTGTTCTGTGGGTAGACGAGACA-ACAGGAGATTATGCAGTTGCTTGGACTTTTATGC 580 ||||||||||||| || |||||| | || || ||||||| |||||||||| ||||| | Sbjct 617 AGCTGTTCTGTGGATAAACGAGA-AGACGGGTGATTATGTGGTTGCTTGGATTTTTAAAC 675 Query 581 GA-CAATACTTGTTCTCATACATA-AAAGGAGATTATTC-T--TGG---T-G--TAAT-- 627 | || ||||||||| |||||| | ||||||||| | || | ||| | | |||| Sbjct 676 -AGCATTACTTGTTCACATACA-AGAAAGGAGATGAATCATGGTGGAACTGGAATAATAA 733 Query 628 CT-G-AA-TC-AT-AATG--G-GAAAAGTTT-GGTTTTGTTTGATATGGCTTGTGAGAAC 678 || | || || | || | | | ||| ||| |||| | || ||| |||||| ||| ||| Sbjct 734 CTGGAAATTCGGTCAAGGACGCGTAAA-TTTGGGTTAT-TTGGATTTGGCTTATGAAAAC 791 Query 679 AATAAGCTTTATTTGT-TGACAATGGATCATCACATCAAGATTTTCAATTTCTATGGAGA 737 | ||||||||| | | | || | ||| ||||||||||||| ||||||||| |||||| Sbjct 792 AGCAAGCTTTATCTCTAT-ACTACCGATGGTCACATCAAGATTATCAATTTCTCTGGAGA 850 Query 738 TTT-TTTAACAGG-AG-AA-C---AA-AA--C----CT-G-T-ATCCGTTTAACT-TCGT 779 ||| | | ||| || || | || || | || | | |||| ||||||| | | Sbjct 851 TTTCCCT-A-AGGAAGAAATCGAAAATAACCCGTATCTGGATCATCCTTTTAACTAT-GC 907 Query 780 TGAGGATCCG-TCGGAA--TACGTTTGGAAGAGGAAG-ATAGTGATTCGGAGATCAGGAG 835 | | || | | |||| || ||| || |||| || |||| |||| || |||||||| Sbjct 908 TCCGCAT-GGATTGGAACTTA--TTTCGAGGAGG-AGAATAGCCATTCAGAAATCAGGAG 963 Query 836 AGGTACTGAT-AGTCTTGAGCTTGaaaaaaaaaGTGC-AA--AATG-AAGAGAAACTTTT 890 |||| |||| | || |||| || | | |||| | || ||| ||||| |||||| Sbjct 964 AGGTTTTGATCA-TCGTGAG-TT--TATTAGAAGTACGAATTGATGAAAGAG-CACTTTT 1018 Query 891 GTTTTACATCTTTAAGATGAATCTTGAGAGTCGCAAGTGGGAAAGAGTTTATTGTATTGG 950 ||||||||||||||||||||||||||||||| |||| |||||||||| ||| |||||| Sbjct 1019 GTTTTACATCTTTAAGATGAATCTTGAGAGTGGCAAATGGGAAAGAGAGCATTCTATTGG 1078 Query 951 AGATGA-GATGTTGAT--T-TTTGGTCGTGGGGTTACAGCTCTT-GCTC---TTGAAGAT 1002 |||||| || | |||| | ||||||| |||||||||| | || | || ||||| Sbjct 1079 AGATGATGA-GATGATAATATTTGGTCATGGGGTTACAA-TAAGAGCACCGGTTCAAGAT 1136 Query 1003 CTTGATGATGGGATAAAGAGTAATTCAATCTATTTCGT 1040 ||| |||||| || |||| | |||||||| |||||| Sbjct 1137 GTTGGTGATGGAATCAAGACTGGTTCAATCTGTTTCGT 1174 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44565689973 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5