BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G04840.1 Length=1170 Score E Sequences producing significant alignments: (Bits) Value Ahg480113 jgi|Araly1|480113|fgenesh2_kg.3__2814__AT2G04840.1 1404 0.0 Ahg930800 jgi|Araly1|930800|scaffold_303257.1 656 0.0 Ahg342808 jgi|Araly1|342808|fgenesh1_pg.C_scaffold_3002571 398 6e-110 Ahg936150 jgi|Araly1|936150|scaffold_500341.1 222 4e-57 Ahg936152 jgi|Araly1|936152|scaffold_500343.1 178 9e-44 > Ahg480113 jgi|Araly1|480113|fgenesh2_kg.3__2814__AT2G04840.1 Length=1197 Score = 1404 bits (760), Expect = 0.0 Identities = 1069/1210 (88%), Gaps = 53/1210 (4%) Strand=Plus/Plus Query 1 ATGGGGAACGGCTTGATGAGcaagaagaagaagaagaagaacaacaagtacaagaagaag 60 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct 1 ATGGGGAACGGCTTGATGAG--A-AAGAAGAAGAAGAAG---AACAAGTACAAGAAGAAG 54 Query 61 agaCCAAACGTGTCTAG-AA-----ATTGCGATTGGTCCAAGTTTTGTTCCGATGTTTTA 114 |||||||| |||||||| || |||||||||||||||| || |||||||| | Sbjct 55 AGACCAAAAGTGTCTAGAAATCGCGATTGCGATTGGTCCAACCTTCCACCCGATGTTCTG 114 Query 115 CGCAAGATTTTCGAAACCTTAAAGAGCCCTATTGATTCTCACC--GC-----GCGTTTGC 167 |||||||||||||||||||||||||| || ||||||||||||| || ||||||| Sbjct 115 CGCAAGATTTTCGAAACCTTAAAGAGTCCAATTGATTCTCACCGAGCAAAAACCGTTTGC 174 Query 168 TCGAATTAGTATTCAGTTTGGAAAACATGCGCGAACAAGCCTCCATGTCCATGGCGATTC 227 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 175 TCGAATTGGTATTCAGTTTGGAAAACATGCGCGAACAAGCCTCCATGTCCATGGCGATTC 234 Query 228 ATACACCAAGGTGA-T-TC----TC--CC------A---C--CCTCCGGAAACTGTCTCC 268 ||||||||| | || | || | || | | ||||||||||||||||| Sbjct 235 ATACACCAA-G-GACTCTCAAAAACAACCTATTGTATGGCTAGCTCCGGAAACTGTCTCC 292 Query 269 TGATGGTCGATCGTCGTCTCAAATTCTATATTTTGAACCTTTTGACGCGGA-CAACGATC 327 ||||||| ||||||||||||||||||| |||||||||| ||||||| ||| || |||| Sbjct 293 TGATGGTTGATCGTCGTCTCAAATTCTCTATTTTGAACATTTTGAC-AGGAGGAAGGATC 351 Query 328 AATCTTCCATCAAT---GTCACTA-ATACGTGGAGGACAAGTATTCTTTAAACCTCAAA- 382 |||||||||||||| || || | ||||||||| |||||||| ||| |||||| ||| Sbjct 352 AATCTTCCATCAATGGAGTTAC-ATATACGTGGAAGACAAGTAACCTTCAAACCTGAAAG 410 Query 383 ATGAATGGTCCAATGATTCTGGATGCTTCTTCGGGCCTTCTCGTAATGGTAACGTGTCAT 442 | ||||||||| ||||||||||||||||||||||| ||| |||||||| ||| || || | Sbjct 411 A-GAATGGTCCGATGATTCTGGATGCTTCTTCGGGTCTTATCGTAATGATAATGTCTCGT 469 Query 443 ATGACTTTGACTCTGTTGAATGGAAAAACTCGGTAGCTGTTCTATGGATAAACGAGACAA 502 |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 470 ATGAATTTGATTCTGTCGAATGGAAAAACTCGGTAGCTGTTCTATGGATAAACGAGACAA 529 Query 503 CAGGAGATTATGTCGTTGCTTGGACATTCATACAGCATTACTTGTTCTTC-TACAAGTCA 561 |||| |||||||||||||||||||||||||||||||||||||||||| || |||||| | Sbjct 530 CAGGGGATTATGTCGTTGCTTGGACATTCATACAGCATTACTTGTTC-TCATACAAGAAA 588 Query 562 GGATATTGGTCTTGGTGTAATCTGAATCATAATGGGAAAAGTTTGGTTGT-GTTTGATAT 620 ||| ||| |||||||||||||| ||||| ||||||||||| |||||| | ||||||||| Sbjct 589 GGAGATTCTTCTTGGTGTAATCTAAATCACAATGGGAAAAGGTTGGTT-TCGTTTGATAT 647 Query 621 GGCATGTGAGAACAATAAGCTTTATCTGTACACAGCTAATCATCATATCAGGATTTTTGA 680 ||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||| Sbjct 648 GGCTTGTGAGAACAATAAGCTTTATCTTTACGCAGCTAATCATCACATAAGGATTTTTGA 707 Query 681 TTTCTCTGGAGCTTATCCTATGGAAAAGAAAACCGAAAACCCGTATTGGAAATATCTGTT 740 ||||||||||| || ||| || ||||||||||||||||||||||||| |||||||| ||| Sbjct 708 TTTCTCTGGAGTTTTTCCCATAGAAAAGAAAACCGAAAACCCGTATTCGAAATATCCGTT 767 Query 741 TAACGCGGTTGAGGAACCGTGGGAATACGTTTGGAAGAGGAAAATAGCGATTCAGAAATC 800 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 768 TAACGCGGTTGAGGAACCGTGCGAATACGTTTGGAAGAGGAAAATAGCGATTCAGAAATC 827 Query 801 ATCAGGTGAGGTTTTGATCATCTTGAGCCTTAAACAAGTGTTTTACGAAGCAGAGAGACT 860 |||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||| Sbjct 828 ATCAGGTGAGGTTTTGATCATCTTGAGCCTTAAACAAGTGTTTTGTGAAGAAGAGAAACT 887 Query 861 TTTGTTTTACATCTTTAAGATGAATCTTGAGAGTTTCAAGTGGGAAAGAGTTTATTCTCT 920 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct 888 TTTGTTTTACATCTTTAAGATGAATCTTGAGAGTTGCAAGTGGGAAAGAGTTTATTCTAT 947 Query 921 TGGAGATGAGATGTTGGTTTTTGGTCAAGGTGTTACAATACCTACTGCTCTTAAAGATCT 980 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 948 TGGAGATGAGATGTTGGTTTTTGGTCAAGGTGTTACAATAGCTACTGCTCTTAAAGATCT 1007 Query 981 TGGTGATGGAATCAAGAGTGATTCAATCTATTTCGTCGATAAAGACGTCTGGCCAGATCA 1040 |||| |||||||||||||||||||| ||| ||| |||| | |||||||||||||||||| Sbjct 1008 TGGTCATGGAATCAAGAGTGATTCAGTCTCTTTTATCGACACAGACGTCTGGCCAGATCA 1067 Query 1041 TCAAGATCATGATCGTCGTGTTTCGAATTGCGGTGTCTTCAATATTGCCACAAGTAAGAT 1100 |||||||||||||| ||||||||||| ||||||||||||| ||||| | ||||||||||| Sbjct 1068 TCAAGATCATGATCATCGTGTTTCGAGTTGCGGTGTCTTCCATATTACTACAAGTAAGAT 1127 Query 1101 CAAATGGCCTACGAAAAAATATCGTTCCGTAAATGAAACTCAGTGGTTTGTGCTCGGAGT 1160 | ||||||||| ||||| ||| ||||| |||||||||||||||||| ||| | ||| | Sbjct 1128 CGAATGGCCTAAGAAAATCTATTGTTCCATAAATGAAACTCAGTGGTATGTTCGGGGATT 1187 Query 1161 TGCTTATTAG 1170 |||||||||| Sbjct 1188 TGCTTATTAG 1197 > Ahg930800 jgi|Araly1|930800|scaffold_303257.1 Length=1223 Score = 656 bits (355), Expect = 0.0 Identities = 757/943 (80%), Gaps = 60/943 (6%) Strand=Plus/Plus Query 252 CTCCGGAAACTGTCTCCTGATGGTCGATCGTCGTCTCAAATTCTATATTT-TGAACCTT- 309 |||||||||||| || |||||||| || | |||||||||||||||||||| | || ||| Sbjct 297 CTCCGGAAACTGGCTTCTGATGGTTGAGCTTCGTCTCAAATTCTATATTTAT-AA-CTTG 354 Query 310 TTGACG-CGGACAACGATCAATCTTCCATCAAT---GTCACTAATACGTGGAGGACAAGT 365 |||||| ||| || |||| |||||||||| || ||| | ||||| ||| || ||||| Sbjct 355 TTGACGAAGGA-AAGGATCGATCTTCCATCGATGGAGTCGCAAATACTTGGCGGGCAAGT 413 Query 366 ATTCTTTAAACCTCAAAATGAATGGTCCAATGA-TT-C-TGGATGCTTCTTCGGGCCTTC 422 | || |||||| || | | | ||| | || | ||||| ||| |||||||||| Sbjct 414 AAGGTTCAAACCT-GGAA-G-A--G---AAT-ATTTCCATGGATACTTGGTCGGGCCTTC 464 Query 423 TCGTAATGG-TAACGTGTCATATGACTTTGACTCTGTTGAAT-GGAAAAACTCGGTAGCT 480 |||| | || ||| ||| | | ||||| ||| | ||||||| ||| ||| ||| ||||| Sbjct 465 TCGT-AGGGATAAAGTGCCGTTTGACTATGAAGCCGTTGAATGGGAGAAA-TCGTTAGCT 522 Query 481 GTTCTATGGATAAACGAGACAACAGGAGATTATGTCGTTGCTTGGACATTCATACAGCAT 540 ||||| ||| ||||||| |||||||| |||||||||||||||||||| || ||||| | Sbjct 523 GTTCTGTGGGTAAACGACACAACAGGGGATTATGTCGTTGCTTGGACTTTTATACAAAAA 582 Query 541 TACTTGTTCTTC-TACAAGTCAGGATATTGG-TCTTGGTGTA-ATCTGAA-TCATAATGG 596 || |||||| || |||| | |||| | ||| | |||| | | || |||| || |||||| Sbjct 583 TATTTGTTC-TCATACATGAAAGGAGA-TGGTTTTTGGCG-AGATTTGAATTC-TAATGG 638 Query 597 GAAAAGTTTGGTTGTGTTTGATATGGCATGTGAGAACAATAAGCTTTATCTGTACACAGC 656 |||||||||||| ||||||||||||| |||||| ||| || ||||||||||| ||| Sbjct 639 AAAAAGTTTGGTTTTGTTTGATATGGCTTGTGAGGACAGTATGCTTTATCTGTTGACAAT 698 Query 657 TAATCATCATATCAGGATTTTTGATTTCTCTGGAGCTTATCCTATGGAAAAGAAAACCGA 716 | ||||||| |||| |||||| |||||| ||||| ||| | | | | ||||| | | Sbjct 699 TGATCATCACATCAAGATTTTCAATTTCTTTGGAG-ATAT--T-TTCACAGGAAAA-C-A 752 Query 717 AAACCCGTATTGGAAAT-ATCTGTTTAAC-GCGGTTGAGGAACCGTGGGAATACGTTTGG 774 ||||| ||||||| | || ||||||| | |||| | |||||||||||||||||||| Sbjct 753 AAACCGGTATTGG-GGTCGTCCGTTTAACTTC-GTTGCGCAACCGTGGGAATACGTTTGG 810 Query 775 AAGAGGAAAATAGCGATTCAGAAATCATCAGGTGAGGTTTTGATCA-TCTTGAGCCTT-- 831 ||||||||||| | ||||| | | |||||| ||||| |||| | ||||||| ||| Sbjct 811 AAGAGGAAAATGGTGATTC-G-GA-GATCAGGAGAGGTACTGAT-AGTCTTGAG-CTTAA 865 Query 832 -A-AACAAGTGTTTTACGAAGCAGAGAGACTTTTGTTTTACATCTTTAAGATGAATCTTG 889 | || ||||| | |||| ||| | |||||||||||||||||||||||||||||||| Sbjct 866 AAGAAAAAGTGAAAAAGGAAG-AGA-A-ACTTTTGTTTTACATCTTTAAGATGAATCTTG 922 Query 890 AGAGTTTCAAGTGGGAAAGAGTTTATTCTCTTGGAGATGAGATGTTG-GTTTTTGGTCAA 948 |||||| |||||||||||||||||||||| ||||||||||||||||| ||||| |||| Sbjct 923 AGAGTTGCAAGTGGGAAAGAGTTTATTCTATTGGAGATGAGATGTTGAGTTTT-GGTCGT 981 Query 949 GGTGTTACAATACCTACT-GCTCTTAAAGATCTTGGTGATGGAATCAAGAGTGATTCAAT 1007 || |||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||| Sbjct 982 GGGGTTACAGTACCT-CTTGCTCTTAAAGATCTTGGGGATGGAATCAAGAGTGATTCAAT 1040 Query 1008 CTATTTCGTCGATAAAGACGTCTGGCCAGATCATCAAGATCATGATCGTCGTGTTTCGAA 1067 || ||| || || ||||||| |||||||||||| |||||||||||| |||||||| || Sbjct 1041 CTGTTTTGTTGACGAAGACGTTTGGCCAGATCATAAAGATCATGATCACCGTGTTTCAAA 1100 Query 1068 TTGCGGTGTCTTCAATATTGCCACAAGTAAGATCAAATGGCCTACGAAAAAATATCGTTC 1127 ||||||||||||| |||||||||||||||||||| ||||||||| ||| | ||| ||| Sbjct 1101 TTGCGGTGTCTTCGATATTGCCACAAGTAAGATCGAATGGCCTAAGAAGATCTATTGTTT 1160 Query 1128 CGTAAATGAAACTCAGTGGTTTGTGCTCGGAGTTGCTTATTAG 1170 | | ||| ||||||| |||||||| | ||||||||||| ||| Sbjct 1161 CATTAATAAAACTCACTGGTTTGTTCGGGGAGTTGCTTACTAG 1203 > Ahg342808 jgi|Araly1|342808|fgenesh1_pg.C_scaffold_3002571 Length=654 Score = 398 bits (215), Expect = 6e-110 Identities = 474/592 (80%), Gaps = 46/592 (8%) Strand=Plus/Plus Query 602 GTTTGGTTGTGTTT-GATATGGCATGTGAGAACAATAAGCTTTATCTGTACAC-AGCTAA 659 |||||| ||| ||| |||||||| |||||||| | ||| |||||||| | ||| || | | Sbjct 86 GTTTGGATGT-TTTGGATATGGCTTGTGAGAAGAGTAAACTTTATCTCTTCACAAG-TGA 143 Query 660 TCATCATATCAGGA-TTTTTGATTTCTCTGGAGCTTAT-CCTATGGAAAAGAAAACCGAA 717 | |||| |||| || ||||| |||||| ||||| || | ||||| | || || ||| Sbjct 144 TTATCACATCAAGAGTTTTT-ATTTCTATGGAGGTT-TCCCTAT---AGAG-GAA--GAA 195 Query 718 AACCCGTATTGGAAAT-ATCTGTTTAACGCGGTT-GAGGAACCGTGGGAATACGTTTGGA 775 |||||||||| | ||| ||| ||||||| ||| || || || ||||||| ||||||| Sbjct 196 AACCCGTATTCG-AATCATCCGTTTAACTTTGTTGGA-GAGCCTTGGGAATCCGTTTGGG 253 Query 776 AGAGGAAAATAGCGATTCAGAAATCATCAGGTGAGGT-TTTGATCA-TCTTGAGCCTT-- 831 ||||||||||||||||| | | ||||| ||||| || || | ||||||| ||| Sbjct 254 GGAGGAAAATAGCGATTC-G-GA-GATCAGAAGAGGTACTT-AT-AGTCTTGAG-CTTAA 307 Query 832 -A-AACAAGTGTTTTACGAAGCAGAGAGACTTTTGTTTTACATCTTTAAGATGAATCTTG 889 | || ||||| | || ||| | |||||||||||||||||||||||||||||||| Sbjct 308 AAGAAAAAGTG-AAAAATAA--AGAAAAACTTTTGTTTTACATCTTTAAGATGAATCTTG 364 Query 890 AGAGTTTCAAGTGGGAAAGAGTTTATTCTCTTGGAGATGAGATGTTGGTTTTTGGTCAAG 949 ||| || ||||||||||||| |||||||| ||||||||||||| ||| ||| ||||| | Sbjct 365 AGAATTGCAAGTGGGAAAGAATTTATTCTATTGGAGATGAGATATTGATTTATGGTCGTG 424 Query 950 GTGTTACAATACCTACT-GCTCTTAAAGATCTTGGTGATGGAATCAAGAGTGATTCAATC 1008 | |||||||||||| || |||||||||||||||||| | ||||||||||||||||||||| Sbjct 425 GGGTTACAATACCT-CTTGCTCTTAAAGATCTTGGTCACGGAATCAAGAGTGATTCAATC 483 Query 1009 TATTTCGTCGATAAAGACGTCTGGCCAGATCATCAAGAT---C-ATGATC-----G-TCG 1058 |||||||| || |||| || |||||||||||| ||||| | | |||| | || Sbjct 484 TATTTCGTGGACGAAGATGTTTGGCCAGATCATAAAGATTGGCCA-GATCATAAAGATCA 542 Query 1059 TGTTTCGAATTGCGGTGTCTTCAATATTGCCACAAGTAAGATCAAATGGCCTACGAAAAA 1118 |||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct 543 TGTTTCAAATTGCGGTGTCTTCGATATTGCCACAAGTAAGATCAAATGGCCTAAGAAGAT 602 Query 1119 ATATCGTTCCGTAAATGAAACTCAGTGGTTTGTGCTCGGAGTTGCTTATTAG 1170 ||| |||| | ||| ||| |||||||||||| | ||||||||||||||| Sbjct 603 CTATTTTTCCTTTAATAAAAATCAGTGGTTTGTTCGGGGAGTTGCTTATTAG 654 > Ahg936150 jgi|Araly1|936150|scaffold_500341.1 Length=1187 Score = 222 bits (120), Expect = 4e-57 Identities = 499/669 (75%), Gaps = 77/669 (12%) Strand=Plus/Plus Query 480 TGTTCTATGGATAAACGAGACAACAGGAGATTATGTCGTTGCTTGGACATTCATACAGCA 539 |||||| ||||||||||||| |||||| ||||||||||||||||||| || | || ||| Sbjct 482 TGTTCTGTGGATAAACGAGAGAACAGGGGATTATGTCGTTGCTTGGATTTTGAAACGGCA 541 Query 540 TTACTTGTTCTTC-TACAAGTCA-G-GAT-ATTGGTCTTGG---TGTAAT-CTGAAT-CA 590 |||||||||| | |||||| | | ||| ||| || ||| || ||| || | | Sbjct 542 TTACTTGTTC-ACATACAAGAAAGGAGATGATTCGTGGTGGAATTGGAATAAGGATTGGA 600 Query 591 -TA---ATGGGAAAAGTTT-GGTTGTGTTTGATATGGCATGTGAGAACAATAAGCTTTAT 645 || || ||||| ||| |||| | || ||| |||| | | |||||| |||||||||| Sbjct 601 TTACCGGTGCGAAAAATTTGGGTTAT-TTGGATGTGGCTTATAAGAACAGTAAGCTTTAT 659 Query 646 CTGTACA-CAGCTAATCATCATATCAGGATTTTTGATTTCTCTGGAGCTTAT-CCTATGG 703 || |||| || | || | || |||| |||| | ||||||||||||| || | |||| || Sbjct 660 CTCTACACCA-CCGATAACCACATCAAGATTATCGATTTCTCTGGAGATT-TCCCTAAGG 717 Query 704 AAAAGAAAACCG--AA-AACCCGTAT-TGGAAAT-AT-CTGTTTAAC-GCGGT-TGAG-G 754 ||| ||| || || ||||||||| ||| || || || |||||| | | | | | Sbjct 718 --AAG-AAATCGAAAATAACCCGTATCTGG--ATCATCCT-TTTAACTATGCTCCGCGTG 771 Query 755 AACCGTGGGAA--TACGTTTGGAAGAGGAAAATAGCGATTCAGAAATCATCAGGTGAGGT 812 | || ||| ||| || |||||||| |||||| |||||| || |||||| ||||| Sbjct 772 GA---TGTGAAGTTAC--TTCGAAGAGGAGAATAGCCATTCAG-AA--ATCAGGAGAGGT 823 Query 813 TTTGATCATCTTGAGCCTTA-AAC-AAGTGTTTTACGAAGCAGAGAGACTTTTGTTTTAC 870 |||||||||||||| ||| || || || | | |||| | | ||||||||||||| Sbjct 824 TTTGATCATCTTGA-ATTTAGTACTAATTG-GTGA--AAGC--A-A-ACTTTTGTTTTAC 875 Query 871 ATCTTTAAGATGAATCTTGAGAGTTTCAAGTGGGAAAGAGTTTATTCTCTTGGAGATGA- 929 |||||||||||||||||||||||| ||| ||||||||||| | ||| |||||||||| Sbjct 876 ATCTTTAAGATGAATCTTGAGAGTGGCAAATGGGAAAGAGTGCAATCTATTGGAGATGAT 935 Query 930 GA--TGTTGGTTTTTGGTCAAGGTGTTACAATACCTA-CTGCTCTTAAAGATCTTGGTGA 986 || ||||| | |||||||| || ||||||||| | | | || ||||| ||||||| Sbjct 936 GAGATGTTGATCTTTGGTCATGGGGTTACAATAAG-AGCACCGGTTCAAGATGTTGGTGA 994 Query 987 TGGAATCAAGAGTGATTCAATCTATTTCGTCGATAA-AGACGTCTGGCCAGATCATCAAG 1045 ||||||||||||| ||| |||| ||||||||| | || |||| | | || | Sbjct 995 CGGAATCAAGAGTGGTTCTATCTTTTTCGTCGACGATAGTGGTCTT-CGGG--CA----G 1047 Query 1046 ATCATGATCGTCGTGT-TTC-GAATTGCGGTGTCTTCAATATTGCCACAAGTAAGA-TCA 1102 | | | ||||| || | ||| || ||||||| |||| ||||||||||||||| || | | Sbjct 1048 A-C-T-ATCGTTGT-TATTCAGA-TTGCGGTATCTTTGATATTGCCACAAGTA-GAATTA 1101 Query 1103 AATGGCCTA 1111 ||||||||| Sbjct 1102 AATGGCCTA 1110 > Ahg936152 jgi|Araly1|936152|scaffold_500343.1 Length=1216 Score = 178 bits (96), Expect = 9e-44 Identities = 432/583 (74%), Gaps = 68/583 (12%) Strand=Plus/Plus Query 477 AGCTGTTCTATGGATAAACGAGACA-ACAGGAGATTATGTCGTTGCTTGGACATTCATAC 535 ||||||||| ||||||||||||| | || || |||||||| |||||||||| || | || Sbjct 617 AGCTGTTCTGTGGATAAACGAGA-AGACGGGTGATTATGTGGTTGCTTGGATTTTTAAAC 675 Query 536 AGCATTACTTGTTCTTC-TACAAGTCA-G-GAT--AT--TGGT----CTTGGTGTAAT-- 582 |||||||||||||| | |||||| | | ||| || |||| | ||| |||| Sbjct 676 AGCATTACTTGTTC-ACATACAAGAAAGGAGATGAATCATGGTGGAAC-TGGAATAATAA 733 Query 583 CT-G-AA-TC-AT-AATG--G-GAAAAGTTT-GGTTGTGTTTGATATGGCATGTGAGAAC 633 || | || || | || | | | ||| ||| |||| | || ||| |||| | ||| ||| Sbjct 734 CTGGAAATTCGGTCAAGGACGCGTAAA-TTTGGGTTAT-TTGGATTTGGCTTATGAAAAC 791 Query 634 AATAAGCTTTATCTGTACAC-AGCTAATCATCATATCAGGATTTTTGATTTCTCTGGAGC 692 | ||||||||||| || || | | || ||| |||| |||| | |||||||||||| Sbjct 792 AGCAAGCTTTATCTCTATACTA-CCGATGGTCACATCAAGATTATCAATTTCTCTGGAGA 850 Query 693 TTAT-CCTATGGAAAAGAAAACCG--AA-AACCCGTAT-TGGAAAT-AT-CTGTTTAACG 745 || | |||| || ||| ||| || || ||||||||| ||| || || || |||||| Sbjct 851 TT-TCCCTAAGG--AAG-AAATCGAAAATAACCCGTATCTGG--ATCATCCT-TTTAACT 903 Query 746 CGGTTGAGGAACCG-TGGGAA--TACGTTTGGAAGAGGAAAATAGCGATTCAGAAATCAT 802 | | | | | | |||| || ||| || ||||| |||||| |||||| || || Sbjct 904 ATGCT-CCGCATGGATTGGAACTTA--TTTCGAGGAGGAGAATAGCCATTCAG-AA--AT 957 Query 803 CAGGTGAGGTTTTGATCATCTTGAGCCTTA-AACAAGT--G-TTTTACGAAGCAGAGAGA 858 |||| ||||||||||||||| |||| ||| | |||| | || | ||| |||| | Sbjct 958 CAGGAGAGGTTTTGATCATCGTGAG-TTTATTAGAAGTACGAATTGATGAA--AGAG-CA 1013 Query 859 CTTTTGTTTTACATCTTTAAGATGAATCTTGAGAGTTTCAAGTGGGAAAGAGTTTATTCT 918 |||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||| Sbjct 1014 CTTTTGTTTTACATCTTTAAGATGAATCTTGAGAGTGGCAAATGGGAAAGAGAGCATTCT 1073 Query 919 CTTGGAGATGA-GATGTTGGT--T-TTTGGTCAAGGTGTTACAATACCTA-CTGCTCTTA 973 |||||||||| || | || | | |||||||| || ||||||||| | | | || Sbjct 1074 ATTGGAGATGATGA-GATGATAATATTTGGTCATGGGGTTACAATAAG-AGCACCGGTTC 1131 Query 974 AAGATCTTGGTGATGGAATCAAGAGTGATTCAATCTATTTCGT 1016 ||||| |||||||||||||||||| || |||||||| |||||| Sbjct 1132 AAGATGTTGGTGATGGAATCAAGACTGGTTCAATCTGTTTCGT 1174 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43650739965 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5