BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G07110.1
Length=453
Score E
Sequences producing significant alignments: (Bits) Value
Ahg475442 jgi|Araly1|475442|fgenesh2_kg.2__572__AT2G07110.1 658 0.0
Ahg902116 jgi|Araly1|902116|Al_scaffold_0004_2766 575 1e-163
Ahg320572 jgi|Araly1|320572|fgenesh1_pm.C_scaffold_4000629 569 5e-162
Ahg908620 jgi|Araly1|908620|Al_scaffold_0002_1701 542 1e-153
Ahg474556 jgi|Araly1|474556|fgenesh2_kg.1__4510__AT2G07110.1 542 1e-153
Ahg484800 jgi|Araly1|484800|fgenesh2_kg.5__792__AT2G07110.1 540 4e-153
Ahg494696 jgi|Araly1|494696|fgenesh2_kg.8__512__AT2G07110.1 536 5e-152
Ahg497144 jgi|Araly1|497144|fgenesh2_kg.9__109__AT2G07110.1 496 8e-140
Ahg490148 jgi|Araly1|490148|fgenesh2_kg.6__3282__AT2G07110.1 466 6e-131
Ahg493864 jgi|Araly1|493864|fgenesh2_kg.7__3297__AT2G07110.1 460 3e-129
Ahg475740 jgi|Araly1|475740|fgenesh2_kg.2__870__AT2G07110.1 460 3e-129
Ahg891703 jgi|Araly1|891703|Al_scaffold_0007_3689 342 1e-93
Ahg495957 jgi|Araly1|495957|fgenesh2_kg.8__1773__AT2G07110.1 342 1e-93
Ahg491986 jgi|Araly1|491986|fgenesh2_kg.7__1419__AT2G07110.1 340 4e-93
Ahg915133 jgi|Araly1|915133|Al_scaffold_0009_102 169 2e-41
> Ahg475442 jgi|Araly1|475442|fgenesh2_kg.2__572__AT2G07110.1
Length=423
Score = 658 bits (356), Expect = 0.0
Identities = 402/424 (95%), Gaps = 3/424 (1%)
Strand=Plus/Plus
Query 32 ATGGGATACATGGAACTCTCTCGTTTATATTTTCA-GAGGATACAAAAGTTCTATCTGCG 90
||||||| ||| ||||||||||||||||||||||| || ||||||||||||||| ||||
Sbjct 1 ATGGGATTCATTGAACTCTCTCGTTTATATTTTCAGGA-GATACAAAAGTTCTAGCTGCA 59
Query 91 CAATACGGACCTAAAGCAAGAACGAAGAAGAACGAAAATGCTGAGAAGGCTTG-TTTGAA 149
|||||||||||||||||| ||||||| ||||||||||||||||||||| |||| ||||||
Sbjct 60 CAATACGGACCTAAAGCAGGAACGAAAAAGAACGAAAATGCTGAGAAGACTTGTTTTGAA 119
Query 150 GTCATATGGAAGCCTTAAACCGGATAGATTGGTAATCGTAAATGCGTTTAGTTTTTCAGA 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 GTCATATGGAAGCCTTAAACCGGATAGATTGGTAATCGTAAATGCGTTTAGTTTTTCAGA 179
Query 210 AAGAGGCTTGTTTTGTCGCTTGAGAAAAGTTGAAAAAGAGTATGAAACGATACTGAAAAG 269
| ||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct 180 AGGAGGCTTATTTTGTTGCTTGAGAAAAGTTGAAAGGGAGTATGAAACGATACTGAAAAG 239
Query 270 GACGCTACAGAGTATTTGTGTTTTGAGAGTTGTTCCAAATACCACCACCTCAGTGATTAT 329
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||
Sbjct 240 GACGCTACAGAGTATTTGTGTTTTGACAGTTGTTTCAAATACCACCACCTCAGTGATAAT 299
Query 330 TCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTTCACCTTGGTAAACA 389
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 300 TCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTGCACCTTGGTAAACA 359
Query 390 TTTACTAATGCTGTCTGAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGTATTT 449
||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 TTTACCGATGTTGTCTGAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGTATTT 419
Query 450 ATAG 453
||||
Sbjct 420 ATAG 423
> Ahg902116 jgi|Araly1|902116|Al_scaffold_0004_2766
Length=417
Score = 575 bits (311), Expect = 1e-163
Identities = 369/397 (93%), Gaps = 3/397 (1%)
Strand=Plus/Plus
Query 33 TGGGATACATGGAACTCTCTCGTTTATATTTTCAGAGGATACAAAAGTTCTATCTGCGCA 92
|||||| || |||||||||||||||||||||||| |||||||||||||||| |||| ||
Sbjct 23 TGGGATTTATTGAACTCTCTCGTTTATATTTTCAGGGGATACAAAAGTTCTACCTGCACA 82
Query 93 ATACGGACCTAAAGCAAGAACGAAGAAGAACGAAAATGCTGAGAAGGCTT-GTTTGAAGT 151
|||| ||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||
Sbjct 83 ATACAGACCTAAAGCAGGAACGAAAAAGAACGGAAATGCTGAGAAGGCTTATTTTGAAGT 142
Query 152 CATATGGAAGCCTTAAACCGGATAGATTGGTAATCGTAAATGCGTTTAGTTTTTCAGAAA 211
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 143 CATATGGAAGCCTTAAACCGGATAGATTGGTAATCGTAAATGCGTTTAGTTTTTCAGAAG 202
Query 212 GAGGCTTGTTTTGTCGCTTGAGAAAAGTTGAAAAAGAGTATGAAACGATACTGAAAAGGA 271
||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 203 GAGGCTTATTTTGTTGCTTGAGAAATGTTGAAAGGGAGTATGAAACGATACTGAAAAGGA 262
Query 272 CGCTACAGAGTATTTGTGTTTTGAGAGTTGTTCCAAATACCACCACCTCAGTGATTATTC 331
| |||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||
Sbjct 263 CACTACAGAGTATTTGTGTTTTGACAGTTGTTCCAAATATCACCACCTCAGTGATAATTC 322
Query 332 AGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTTCACCTTGGTAAACATT 391
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 323 AGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTGGACCTTGGTAAACATT 382
Query 392 TACTAATGCTGTCTGAAACACATATAATCCGGTATAA 428
|||| ||| ||||||||||||||| | ||||||||||
Sbjct 383 TACTGATGTTGTCTGAAACACATA-A-TCCGGTATAA 417
> Ahg320572 jgi|Araly1|320572|fgenesh1_pm.C_scaffold_4000629
Length=387
Score = 569 bits (308), Expect = 5e-162
Identities = 361/386 (94%), Gaps = 5/386 (1%)
Strand=Plus/Plus
Query 69 GGATACAAAAGTTCTATCTGCGCAATACGGACCTAAAGCAAGAACGAAGAAGAACGAAAA 128
||||||||||||| || |||| ||||||| |||||||||| ||||||||||||||||||
Sbjct 6 GGATACAAAAGTTTTAACTGCACAATACGAACCTAAAGCAGGAACGAAGAAGAACGAAAC 65
Query 129 TGCTGAGAAGGCTTG-TTTGAAGTCATATGGAAGCCTTAAACCGGATAGATTGGTAATCG 187
|||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 66 TGCTGAGAAGACTTGTTTTGAAGTCATATGGAA----TAAACCGGATAGATTGGTAATCG 121
Query 188 TAAATGCGTTTAGTTTTTCAGAAAGAGGCTTGTTTTGTCGCTTGAGAAAAGTTGAAAAAG 247
||||||| ||||||| ||||||| |||||||||||||| |||||||||||||||||| |
Sbjct 122 TAAATGCATTTAGTTGTTCAGAAGGAGGCTTGTTTTGTTGCTTGAGAAAAGTTGAAAGGG 181
Query 248 AGTATGAAACGATACTGAAAAGGACGCTACAGAGTATTTGTGTTTTGAGAGTTGTTCCAA 307
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 182 AGTATGAAACGATACTGAAAAGGACGCTACAGAGTATTTGTGTTTTGACAGTTGTTCCAA 241
Query 308 ATACCACCACCTCAGTGATTATTCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTAT 367
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 242 ATACCACCACCTCAGTGATAATTCAGGTTGTACATGTTGGTGGTTCTGTATCGTTTTTAT 301
Query 368 GTTCCTTTCACCTTGGTAAACATTTACTAATGCTGTCTGAAACACATATAATCCGGTATA 427
||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 302 GTTCCTTGCACCTAGGTAAACATTTACTGATGTTGTCTGAAACACATATAATCCGGTATA 361
Query 428 AACAATGTCTGTTTGAGTATTTATAG 453
||||||||||||||||||||||||||
Sbjct 362 AACAATGTCTGTTTGAGTATTTATAG 387
> Ahg908620 jgi|Araly1|908620|Al_scaffold_0002_1701
Length=369
Score = 542 bits (293), Expect = 1e-153
Identities = 341/364 (94%), Gaps = 3/364 (1%)
Strand=Plus/Plus
Query 92 AATACGGACCTAAAGCAAGAACGAAGAAGAACGAAAATGCTGAGAAGGCTTG-TTTGAAG 150
||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 7 AATACAGACCTAAAGCAGGAACGAAGAAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAG 66
Query 151 TCATATGGAAGCCTTAAACCGGATAGATTGGTAATCGTAAATGCGTTTAGTTTTTCAGAA 210
||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| |
Sbjct 67 TCATATGGAAGCCTTAAGCCGGATAGATTGGTAATCGTAAATGCGTTTCGTTGTTCAG-A 125
Query 211 AG-AGGCTTGTTTTGTCGCTTGAGAAAAGTTGAAAAAGAGTATGAAACGATACTGAAAAG 269
|| ||||||||||||| |||||||||||||||||| |||||| |||||||||| |||||
Sbjct 126 AGAAGGCTTGTTTTGTTGCTTGAGAAAAGTTGAAAGGGAGTATAAAACGATACTCAAAAG 185
Query 270 GACGCTACAGAGTATTTGTGTTTTGAGAGTTGTTCCAAATACCACCACCTCAGTGATTAT 329
|||| ||||||||||||||||||||| |||||||||||||| ||||| ||||||||| ||
Sbjct 186 GACGTTACAGAGTATTTGTGTTTTGACAGTTGTTCCAAATAGCACCATCTCAGTGATAAT 245
Query 330 TCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTTCACCTTGGTAAACA 389
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 246 TCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTGCACCTTGGTAAATA 305
Query 390 TTTACTAATGCTGTCTGAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGTATTT 449
|||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 306 TTTATTGATGCTGTCTAAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGTATTT 365
Query 450 ATAG 453
||||
Sbjct 366 ATAG 369
> Ahg474556 jgi|Araly1|474556|fgenesh2_kg.1__4510__AT2G07110.1
Length=369
Score = 542 bits (293), Expect = 1e-153
Identities = 341/364 (94%), Gaps = 3/364 (1%)
Strand=Plus/Plus
Query 92 AATACGGACCTAAAGCAAGAACGAAGAAGAACGAAAATGCTGAGAAGGCTTG-TTTGAAG 150
||||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||||
Sbjct 7 AATACAGACCTAAAGCAGGAACAAAGAAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAG 66
Query 151 TCATATGGAAGCCTTAAACCGGATAGATTGGTAATCGTAAATGCGTTTAGTTTTTCAGAA 210
||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||| |
Sbjct 67 TCATATGGAAGCCTTAAGCCGGATAGATTGGTAATCGTAAATGTGTTTCGTTGTTCAG-A 125
Query 211 AG-AGGCTTGTTTTGTCGCTTGAGAAAAGTTGAAAAAGAGTATGAAACGATACTGAAAAG 269
|| ||||||||||||| |||||||||||||||||| |||||| |||||||||| |||||
Sbjct 126 AGAAGGCTTGTTTTGTTGCTTGAGAAAAGTTGAAAGGGAGTATAAAACGATACTCAAAAG 185
Query 270 GACGCTACAGAGTATTTGTGTTTTGAGAGTTGTTCCAAATACCACCACCTCAGTGATTAT 329
|||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||
Sbjct 186 GACGTTACAGAGTATTTGTGTTTTGACAGTTGTTCCAAATAGCACCACCTCAGTGATAAT 245
Query 330 TCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTTCACCTTGGTAAACA 389
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 246 TCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTGCACCTTGGTAAATA 305
Query 390 TTTACTAATGCTGTCTGAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGTATTT 449
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 306 TTTATTGATGCTGTCTGAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGTATTT 365
Query 450 ATAG 453
||||
Sbjct 366 ATAG 369
> Ahg484800 jgi|Araly1|484800|fgenesh2_kg.5__792__AT2G07110.1
Length=384
Score = 540 bits (292), Expect = 4e-153
Identities = 354/383 (92%), Gaps = 8/383 (2%)
Strand=Plus/Plus
Query 16 TTTTTATCCTTTTTGAATGGGATACATGGAACTCTCTCGTTTATATTTTCAGAGGATACA 75
|||||||| ||||| |||||||| ||| ||| |||||||||||||||||||| |||||||
Sbjct 5 TTTTTATCATTTTTAAATGGGATTCATTGAAATCTCTCGTTTATATTTTCAG-GGATACA 63
Query 76 AAAGTTCTATCTGC-GCAATACGGACCTAAAGCAAGAACGAAGAAGAACGAAAATGCTGA 134
|||||| || |||| | ||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct 64 AAAGTTATAGCTGCAG-AATACAGACCTAAAGCAGGAACGAAGGAGAACGAAAATGCTGA 122
Query 135 GAAGGCTTG-TTTGAAGTCATATGGAAGCCTTAAACCGGATAGATTGGTAATCGTAAATG 193
||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 123 GAAGGCTTGTTTTGAAGTC-TATGGAAACCTTAAACCGGATAGATTGGTAATCGTAAATG 181
Query 194 CGTTTAGTTTTTCAGAAA-GAGGCTTGTTTTGTCGCTTGAGAAAAGTTGAAAAAGAGTAT 252
|| ||| || |||| ||| |||| ||||||||| |||||||||||||||||| ||||||
Sbjct 182 CGCTTACTTGTTCA-AAAGGAGGTTTGTTTTGTTGCTTGAGAAAAGTTGAAAGGGAGTAT 240
Query 253 GAAACGATACTGAAAAGGACGCTACAGAGTATTTGTGTTTTGAGAGTTGTTCCAAATACC 312
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 241 GAAACGATACTGAAAAGGACGCTACAGAGTATTTGTGTTTTGACAGTTGTTCCAAATACC 300
Query 313 ACCACCTCAGTGATTATTCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCC 372
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 301 ACCACCTCAGTGATCATTCAGGTTGTACATGATGGTGGTTCTGTATCGTTTT-ATGTTCC 359
Query 373 TTTCACCTTGGTAAACATTTACT 395
|| ||||||||||||||||||||
Sbjct 360 TTACACCTTGGTAAACATTTACT 382
> Ahg494696 jgi|Araly1|494696|fgenesh2_kg.8__512__AT2G07110.1
Length=369
Score = 536 bits (290), Expect = 5e-152
Identities = 341/365 (93%), Gaps = 5/365 (1%)
Strand=Plus/Plus
Query 92 AATACGGACCTAAAGCAAGAACGAAGAAGAACGAAAATGCTGAGAAGGCTTG-TTTGAAG 150
||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 7 AATACAGACCTAAAGCAGGAACGAAGAAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAG 66
Query 151 TCATATGGAAGCCTTAAACCGGATAGATTGGTAATCGTAAATGCGTTTAGTTTTTCAGAA 210
||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| |
Sbjct 67 TCATATGGAAGCCTTAAGCCGGATAGATTGGTAATCGTAAATGCGTTTCGTTGTTCAG-A 125
Query 211 AG-AGGCTTGTTTTGTCGCTTGAGAAAAGTTGAAAAAGAGTATGAAACGATACTGAAAAG 269
|| ||||||||||||| |||||||||||||||||| |||||| |||||||||| |||||
Sbjct 126 AGAAGGCTTGTTTTGTTGCTTGAGAAAAGTTGAAAGGGAGTATAAAACGATACTCAAAAG 185
Query 270 GACGCTACAGAGTATTTGTGTTTTGAGAGTTGTTCCAAATACCACCACCTCAGTGATTAT 329
|||| |||||| |||||||||||||| |||||||||||||| ||||||||||||||| ||
Sbjct 186 GACGTTACAGAATATTTGTGTTTTGACAGTTGTTCCAAATAGCACCACCTCAGTGATAAT 245
Query 330 TCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTT-CACCTTGGTAAAC 388
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 246 TCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTC-TTTGCACCTTGGTAAAT 304
Query 389 ATTTACTAATGCTGTCTGAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGTATT 448
||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 305 ATTTATTGATGCTGTCTGAAACACATATAATCCGTTATAAACAATGTCTGTTTGAGTATT 364
Query 449 TATAG 453
|||||
Sbjct 365 TATAG 369
> Ahg497144 jgi|Araly1|497144|fgenesh2_kg.9__109__AT2G07110.1
Length=312
Score = 496 bits (268), Expect = 8e-140
Identities = 297/311 (95%), Gaps = 2/311 (1%)
Strand=Plus/Plus
Query 86 CTGCGCAATACGGACCTAAAGCAAGAACGAAGAAGAACGAAAATGCTGAGAAGGCTTG-T 144
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 1 CTGCACAATACGGACCTAAAGCAGGAACGAAGAAGAACGAAAATGCTGAGAAGGCTTGTT 60
Query 145 TTGAAGTCATATGGAAGCCTTAAACCGGATAGATTGGTAATCGTAAATGCGTTTAGTTTT 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTGAAGTCATATGGAAGCCTTAAACCGGATAGATTGGTAATCGTAAATGCGTTTAGTTTT 120
Query 205 TCAGAAAGAGGCTTGTTTTGTCGCTTGAGAAAAGTTGAAAAAGAGTATGAAACGATACTG 264
|||||| || ||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 121 TCAGAAGGAAGCTTGTTTTGTTGCTTGAGAAAAGTTGAAAGGGAGTATGAAACGATACTG 180
Query 265 AAAAGGACGCTACAGAGTATTTGTGTTTTGAGAGTTGTTCCAAATACCACCACCTCAGTG 324
||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 181 AAAAGGACGATACAGAGTATTTGTGTTTTGACAGTTGTTCTAAATACCACCACCTCAGTG 240
Query 325 ATTATTCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTTCACCTTGGT 384
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 241 ATAATTCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTGCACCT-GGT 299
Query 385 AAACATTTACT 395
|||||||||||
Sbjct 300 AAACATTTACT 310
> Ahg490148 jgi|Araly1|490148|fgenesh2_kg.6__3282__AT2G07110.1
Length=399
Score = 466 bits (252), Expect = 6e-131
Identities = 286/303 (94%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 151 TCATATGGAAGCCTTAAACCGGATAGATTGGTAATCGTAAATGCGTTTAGTTTTTCAGAA 210
||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 97 TCATATGGAAGCCATAAACCGGATAGATTGGTAATCGTAAATGCCTTTAGTTTTTCATCC 156
Query 211 AGAGGCTTGTTTTGTCGCTTGAGAAAAGTTGAAAAAGAGTATGAAACGATACTGAAAAGG 270
||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct 157 GGAGGCGTGTTTTGTTGCTTGAGAAAAGTTGAAAGGGAGTATGAAACGATACTGAAAAGG 216
Query 271 ACGCTACAGAGTATTTGTGTTTTGAGAGTTGTTCCAAATACCACCACCTCAGTGATTATT 330
|||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 217 ACGCTACAGAATATTTGTGTTTTGACAGTTGTTCCAAATACCACCACCTCAGTGATAATT 276
Query 331 CAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTTCACCTTGGTAAACAT 390
|| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 277 CAAGTTGTACATGATGGTGGTTCTGTATCTTTTTTATGTTCCTTGCACCTTGGTAAACAT 336
Query 391 TTACTAATGCTGTCTGAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGTATTTA 450
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 337 TTACTGATGCTGTCTGAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGTATTTA 396
Query 451 TAG 453
|||
Sbjct 397 TAG 399
> Ahg493864 jgi|Araly1|493864|fgenesh2_kg.7__3297__AT2G07110.1
Length=303
Score = 460 bits (249), Expect = 3e-129
Identities = 286/304 (94%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 151 TCATATGGAAGCCTTAAACCGGATAGATTGGTAATCGTAAATGCGTTTAGTTTTTCAGAA 210
||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| |
Sbjct 1 TCATATGGAAGCCTTAAGCCGGATAGATTGGTAATCGTAAATGCGTTTCGTTGTTCAG-A 59
Query 211 AG-AGGCTTGTTTTGTCGCTTGAGAAAAGTTGAAAAAGAGTATGAAACGATACTGAAAAG 269
|| ||||||||||||| |||||||||||||||||| |||||| |||||||||| |||||
Sbjct 60 AGAAGGCTTGTTTTGTTGCTTGAGAAAAGTTGAAAGGGAGTATAAAACGATACTCAAAAG 119
Query 270 GACGCTACAGAGTATTTGTGTTTTGAGAGTTGTTCCAAATACCACCACCTCAGTGATTAT 329
|||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||
Sbjct 120 GACGTTACAGAGTATTTGTGTTTTGAAAGTTGTTCCAAATAGCACCACCTCAGTGATAAT 179
Query 330 TCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTTCACCTTGGTAAACA 389
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 180 TCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTGCACCTTGGTAAATA 239
Query 390 TTTACTAATGCTGTCTGAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGTATTT 449
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 TTTATTGATGCTGTCTGAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGTATTT 299
Query 450 ATAG 453
||||
Sbjct 300 ATAG 303
> Ahg475740 jgi|Araly1|475740|fgenesh2_kg.2__870__AT2G07110.1
Length=303
Score = 460 bits (249), Expect = 3e-129
Identities = 286/304 (94%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 151 TCATATGGAAGCCTTAAACCGGATAGATTGGTAATCGTAAATGCGTTTAGTTTTTCAGAA 210
||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| |
Sbjct 1 TCATATGGAAGCCTTAAGCCGGATAGATTGGTAATCGTAAATGCGTTTCGTTGTTCAG-A 59
Query 211 AG-AGGCTTGTTTTGTCGCTTGAGAAAAGTTGAAAAAGAGTATGAAACGATACTGAAAAG 269
|| ||||||||||||| |||||||||||||||||| |||||| |||||||||| |||||
Sbjct 60 AGAAGGCTTGTTTTGTTGCTTGAGAAAAGTTGAAAGGGAGTATAAAACGATACTCAAAAG 119
Query 270 GACGCTACAGAGTATTTGTGTTTTGAGAGTTGTTCCAAATACCACCACCTCAGTGATTAT 329
|||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||
Sbjct 120 GACGTTACAGAGTATTTGTGTTTTGAAAGTTGTTCCAAATAGCACCACCTCAGTGATAAT 179
Query 330 TCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTTCACCTTGGTAAACA 389
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 180 TCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTGCACCTTGGTAAATA 239
Query 390 TTTACTAATGCTGTCTGAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGTATTT 449
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 TTTATTGATGCTGTCTGAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGTATTT 299
Query 450 ATAG 453
||||
Sbjct 300 ATAG 303
> Ahg891703 jgi|Araly1|891703|Al_scaffold_0007_3689
Length=255
Score = 342 bits (185), Expect = 1e-93
Identities = 225/244 (92%), Gaps = 3/244 (1%)
Strand=Plus/Plus
Query 92 AATACGGACCTAAAGCAAGAACGAAGAAGAACGAAAATGCTGAGAAGGCTTG-TTTGAAG 150
||||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||||
Sbjct 7 AATACAGACCTAAAGCAGGAACAAAGAAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAG 66
Query 151 TCATATGGAAGCCTTAAACCGGATAGATTGGTAATCGTAAATGCGTTTAGTTTTTCAGAA 210
||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||
Sbjct 67 TCATATGGAAGCCTTAAGCCGGATAGATTGGTAATCGTAAATGCGTTTCGTTGTTCAGAA 126
Query 211 AGA-GGCTTGTTTTGTCGCTTGAGAAAAGTTGAAAAAGAGTATGAAACGATACTGAAAAG 269
|| |||||||||||| |||||||||||||||||| |||||| |||||||||| |||||
Sbjct 127 -GAAGGCTTGTTTTGTTGCTTGAGAAAAGTTGAAAGGGAGTATAAAACGATACTCAAAAG 185
Query 270 GACGCTACAGAGTATTTGTGTTTTGAGAGTTGTTCCAAATACCACCACCTCAGTGATTAT 329
|||| ||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||
Sbjct 186 GACGTTACAGAGTATTTGTGTTTTGACAGTTGTTCCAAATAGCACCGCCTCAGTGATAAT 245
Query 330 TCAG 333
||||
Sbjct 246 TCAG 249
> Ahg495957 jgi|Araly1|495957|fgenesh2_kg.8__1773__AT2G07110.1
Length=327
Score = 342 bits (185), Expect = 1e-93
Identities = 228/248 (92%), Gaps = 6/248 (2%)
Strand=Plus/Plus
Query 212 GAGGCTTGTTTTGTCGCTT--G-A-GA--AAAGTTGAAAAAGAGTATGAAACGATACTGA 265
||||| |||||||| |||| | | || |||||||||| |||||||||||||||||||
Sbjct 80 GAGGCGTGTTTTGTTGCTTGAGTATGACCAAAGTTGAAAGGGAGTATGAAACGATACTGA 139
Query 266 AAAGGACGCTACAGAGTATTTGTGTTTTGAGAGTTGTTCCAAATACCACCACCTCAGTGA 325
||||||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||
Sbjct 140 AAAGGACGCTACAGAATATTTGTGTTTTGACAGTTGTTACAAATACCGCCACCTCAGTGA 199
Query 326 TTATTCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTTTCACCTTGGTA 385
| ||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||
Sbjct 200 TAATTCAGGTTGTACATGATGGTGGTTATGTATCGTCTTTATGTTCCTTGCACCTTGGTA 259
Query 386 AACATTTACTAATGCTGTCTGAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGT 445
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 260 AACATTTACTGATGTTGTCTGAAACACATATAATCCGGTATAAACAATGTCTGTTTGAGT 319
Query 446 ATTTATAG 453
||||||||
Sbjct 320 ATTTATAG 327
Score = 115 bits (62), Expect = 3e-25
Identities = 70/74 (95%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 69 GGATACAAAAGTTCTATCTGCGCAATACGGACCTAAAGCAAGAACGAAGAAGAACGAAAA 128
|||||||||||||| |||||| |||||||||||||||||| ||| |||||||||||||||
Sbjct 2 GGATACAAAAGTTCAATCTGCACAATACGGACCTAAAGCAGGAAAGAAGAAGAACGAAAA 61
Query 129 TGCTGAGAAGGCTT 142
||||||||||||||
Sbjct 62 TGCTGAGAAGGCTT 75
> Ahg491986 jgi|Araly1|491986|fgenesh2_kg.7__1419__AT2G07110.1
Length=378
Score = 340 bits (184), Expect = 4e-93
Identities = 235/259 (91%), Gaps = 6/259 (2%)
Strand=Plus/Plus
Query 201 TTTTTCAGAAAGAGGCTTGTTTTGTCGCTT--G-A-GA--AAAGTTGAAAAAGAGTATGA 254
||||||| | ||||| |||||||| |||| | | || |||||||||| ||||||||
Sbjct 120 TTTTTCATCAGGAGGCGTGTTTTGTTGCTTGAGTATGACCAAAGTTGAAAGGGAGTATGA 179
Query 255 AACGATACTGAAAAGGACGCTACAGAGTATTTGTGTTTTGAGAGTTGTTCCAAATACCAC 314
|||||||||||||| ||||||||||| |||||||||||||| ||||||| |||||||| |
Sbjct 180 AACGATACTGAAAAAGACGCTACAGAATATTTGTGTTTTGACAGTTGTTACAAATACCGC 239
Query 315 CACCTCAGTGATTATTCAGGTTGTACATGATGGTGGTTCTGTATCGTTTTTATGTTCCTT 374
|||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 240 CACCTCAGTGATAATTCAGGTTGTACATGATGGTGGTTATGTATCGTCTTTATGTTCCTT 299
Query 375 TCACCTTGGTAAACATTTACTAATGCTGTCTGAAACACATATAATCCGGTATAAACAATG 434
|||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 300 GCACCTTGGTAAACATTTACTGATGTTGTCTGAAACACATATAATCCGGTATAAACAATG 359
Query 435 TCTGTTTGAGTATTTATAG 453
|||||||||||||||||||
Sbjct 360 TCTGTTTGAGTATTTATAG 378
Score = 169 bits (91), Expect = 2e-41
Identities = 110/119 (92%), Gaps = 1/119 (1%)
Strand=Plus/Plus
Query 32 ATGGGATACATGGAACTCTCTCGTTTATATTTTCAGAGGATACAAAAGTTCTATCTGCGC 91
||||||| ||| ||||| |||||||||||||||||| |||||||||||||||| |||| |
Sbjct 1 ATGGGATTCATTGAACTGTCTCGTTTATATTTTCAGGGGATACAAAAGTTCTAGCTGCAC 60
Query 92 AATACGGACCTAAAGCAAGAACGAAGAAGAACGAAAATGCTGAGAAGGCTTGTTT-GAA 149
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||
Sbjct 61 AATACGGACCTAAAGCAGGAAAGAAGAAGAACGAAAATGCTGAGAAGGCTTGTTTTGAA 119
> Ahg915133 jgi|Araly1|915133|Al_scaffold_0009_102
Length=183
Score = 169 bits (91), Expect = 2e-41
Identities = 107/114 (94%), Gaps = 3/114 (3%)
Strand=Plus/Plus
Query 69 GGATACAAAAGTTCTATCTGC-GCAATACGGACCTAAAGCAAGAACGAAGAAGAACGAAA 127
||||||||||||| || |||| | ||||||||||||||||| ||||||||||||||||||
Sbjct 71 GGATACAAAAGTTATACCTGCAG-AATACGGACCTAAAGCAGGAACGAAGAAGAACGAAA 129
Query 128 ATGCTGAGAAGGCTTGTTT-GAAGTCATATGGAAGCCTTAAACCGGATAGATTG 180
||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 130 ATGCTGAGAAGGCTTGTTTTGAAGTCATATGGAAACCTTAAACCGGATAGATTG 183
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 16368747681
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5