BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT2G07669.1

Length=330
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg931009 jgi|Araly1|931009|scaffold_303466.1                        610    2e-174


> Ahg931009 jgi|Araly1|931009|scaffold_303466.1
Length=622

 Score =  610 bits (330),  Expect = 2e-174
 Identities = 330/330 (100%), Gaps = 0/330 (0%)
 Strand=Plus/Plus

Query  1    ATGGCGGGGCCCGGGATCCCTTGCTGCTGCGGTAAAAGAGTCTTCCTTCTTCTGGGCGGA  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  36   ATGGCGGGGCCCGGGATCCCTTGCTGCTGCGGTAAAAGAGTCTTCCTTCTTCTGGGCGGA  95

Query  61   ATGTGTATGAGTAGGCGTGAAGTAGGCGAAGCAGTCCTCCCGTTGATACGTGGGATAGGA  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  96   ATGTGTATGAGTAGGCGTGAAGTAGGCGAAGCAGTCCTCCCGTTGATACGTGGGATAGGA  155

Query  121  GAAGGGGTCTACCACTTTATATCACTAAGTTCCCCCTCTCCGTCTTGCAGGTATTGTTTC  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  156  GAAGGGGTCTACCACTTTATATCACTAAGTTCCCCCTCTCCGTCTTGCAGGTATTGTTTC  215

Query  181  TGGGTTGTGTCTGCTTCCCGCTGTGCAGCTTCCACTTCCTTTCTTTGTTCTCTGGGAATA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  216  TGGGTTGTGTCTGCTTCCCGCTGTGCAGCTTCCACTTCCTTTCTTTGTTCTCTGGGAATA  275

Query  241  AGTAGCATGAAGAGTTCATCTGTTGTCCGTAGGTCCCTGGCTGAGTTATCATGTGTAGCT  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  276  AGTAGCATGAAGAGTTCATCTGTTGTCCGTAGGTCCCTGGCTGAGTTATCATGTGTAGCT  335

Query  301  AAGTACGATCTGCGTTCTGCTGTCAGTTAA  330
            ||||||||||||||||||||||||||||||
Sbjct  336  AAGTACGATCTGCGTTCTGCTGTCAGTTAA  365



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 11675610234


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5