BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT2G07676.1

Length=357
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg480257 jgi|Araly1|480257|fgenesh2_kg.3__2958__AT2G07676.1         654    0.0  


> Ahg480257 jgi|Araly1|480257|fgenesh2_kg.3__2958__AT2G07676.1
Length=357

 Score =  654 bits (354),  Expect = 0.0
 Identities = 356/357 (99%), Gaps = 0/357 (0%)
 Strand=Plus/Plus

Query  1    ATGGTAGCTTCTGATTCACGGCCAATGAGACTCCGCTTGCGAGCTGAACTCTTTTTGGCA  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGGTAGCTTCTGATTCACGGCCAATGAGACTCCGCTTGCGAGCTGAACTCTTTTTGGCA  60

Query  61   TCATTCGCAGTGAGAGAAGAGAGCATACGCAGTGAAGAAGGGAGTGGAGCTTATATTTCA  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   TCATTCGCAGTGAGAGAAGAGAGCATACGCAGTGAAGAAGGGAGTGGAGCTTATATTTCA  120

Query  121  AAGTATATTAAAGGTATTCTAAAATCAAGATTATCCCGACGTGAGCAGTCACGCTGGAAT  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  AAGTATATTAAAGGTATTCTAAAATCAAGATTATCCCGACGTGAGCAGTCACGCTGGAAT  180

Query  181  ATAATAGATGATACAACTTATATGGCTTTCTTTGAAGAATTTGCGTCTCTTAATCCAGTT  240
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct  181  ATAATAGATGATACAACTTCTATGGCTTTCTTTGAAGAATTTGCGTCTCTTAATCCAGTT  240

Query  241  TTTCATACTTTCTTATTTTACGGGAGGAGAGACGGAGAAGATCTTTCTTTTCACATTGTT  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  TTTCATACTTTCTTATTTTACGGGAGGAGAGACGGAGAAGATCTTTCTTTTCACATTGTT  300

Query  301  GGGTTTTTTCGTCTATCGATACGGGGTTACATATTCTTTTTATGGGAAAGCTTTTAG  357
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  GGGTTTTTTCGTCTATCGATACGGGGTTACATATTCTTTTTATGGGAAAGCTTTTAG  357



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 12705811137


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5