BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G07678.1 Length=738 Score E Sequences producing significant alignments: (Bits) Value Ahg931008 jgi|Araly1|931008|scaffold_303465.1 1336 0.0 > Ahg931008 jgi|Araly1|931008|scaffold_303465.1 Length=780 Score = 1336 bits (723), Expect = 0.0 Identities = 733/738 (99%), Gaps = 0/738 (0%) Strand=Plus/Plus Query 1 ATGAAAATGAAATCTCCTTTATTTAGAGGACCACTGGTCAACAGTTCCACAGAAAATCCA 60 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23 ATGAAAATTAAATCTCCTTTATTTAGAGGACCACTGGTCAACAGTTCCACAGAAAATCCA 82 Query 61 ATTCATATCCTAACGCGAGAGAAATTGAGACATCAGACCAGTGGTACAAACTCAACAGAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 83 ATTCATATCCTAACGCGAGAGAAATTGAGACATCAGACCAGTGGTACAAACTCAACAGAG 142 Query 121 AAAGTAATACTACCTAATATACTTCATAGTTATATCAAAAACCTAAACTTAGATTTCACA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 143 AAAGTAATACTACCTAATATACTTCATAGTTATATCAAAAACCTAAACTTAGATTTCACA 202 Query 181 TCACCATATGGATCAACTGGTAATAATGAAGTATTAAGCATACTTCGTAGTAGGTTTAAA 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 203 TCACCATATGGATCAACTGGTAATAATGAATTATTAAGCATACTTCGTAGTAGGTTTAAA 262 Query 241 CAAAGCATTTTCCCATCATCTGGATTAAAGTGTTTGGATACTACTGGTGATTTTCTCATC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 263 CAAAGCATTTTCCCATCATCTGGATTAAAGTGTTTGGATACTACTGGTGATTTTCTCATC 322 Query 301 AAAAATGTTTTACATAAAAGATATGAAAGTGTTCAGAAGAATATCTCAAATGCATTATCA 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 323 AAAAATGTTTTACATAAAAGATATGAAAGTGTTCAGCAGAATATCTCAAATGCATTATCA 382 Query 361 TCCTCCATAAATTCTCGCACTGCAGTCTTCTTTTGTATACTGTTCAGTATAACAGTGTTA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 383 TCCTCCATAAATTCTCGCACTGCAGTCTTCTTTTGTATACTGTTCAGTATAACAGTGTTA 442 Query 421 ATGGAAATAGCTCCTGGACCTCTTTTGAAGAAACCTTCATTATTATTTTCAGATAATTTA 480 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 443 ATGGAAATAGCTCCTGGACCTCTTTTGAACAAACCTTCATTATTATTTTCAGATAATTTA 502 Query 481 CCAAATGTATTGCAATATACACGAGATGTGTATGTGAATCATGTTTGTATAATACACAAA 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 503 CCAAATGTATTGCAATATACACGAGATGTGTATGTGAATCATGTTTGTATAATACACAAA 562 Query 541 AGTTTAAGTCCATGTGAGTGCGAGGAGCCTCTCAATCGAATTATTAGAGATATGTTTCCG 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 563 AGTTTAAGTCCATGTGAGTGCGAGGAGCCTCTCAATCGAATTATTAGAGATATGTTTCCG 622 Query 601 CAAACCACTTTTGACCCACTTGAACTACAGAAACCTTCACCCAGTAAAGTGAAAACTATA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 623 CAAACCACTTTTGACCCACTTGAACTACAGAAACCTTCACCCAGTAAAGTGAAAACTATA 682 Query 661 ACCTACATGCTTGGTACTATTCTTCTTGTAATTACATTAATGGATAAGACTGGATACACT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 683 ACCTACATGCTTGGTACTATTCTTCTTGTAATTACATTAATGGATAAGACTGGATACACT 742 Query 721 CAATTAGTTAAAATGTAG 738 ||||||||| |||||||| Sbjct 743 CAATTAGTTCAAATGTAG 760 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27181639821 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5