BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G07714.1 Length=591 Score E Sequences producing significant alignments: (Bits) Value Ahg319381 jgi|Araly1|319381|fgenesh1_pm.C_scaffold_3002397 1086 0.0 > Ahg319381 jgi|Araly1|319381|fgenesh1_pm.C_scaffold_3002397 Length=591 Score = 1086 bits (588), Expect = 0.0 Identities = 590/591 (99%), Gaps = 0/591 (0%) Strand=Plus/Plus Query 1 ATGGATCTTTGGGATCGTTTTTGTGTTAACCTGCATACTCGGAAAATCACTCTGGAGGAT 60 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 ATGGATCTTTGGGATCGTTTTTGTGTTAACCTGCATACTCGGAAAATAACTCTGGAGGAT 60 Query 61 GAATCACAAAAGAGGTCAATGGATCTTAGGCTATTGCATGGAGTTGCTTATGGTCATTCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GAATCACAAAAGAGGTCAATGGATCTTAGGCTATTGCATGGAGTTGCTTATGGTCATTCA 120 Query 121 TGGTTTGGTAAATGGGGTTACCGCTTTTGCAGTGGGAGCTTTGGTGTGGAAGAACACCAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TGGTTTGGTAAATGGGGTTACCGCTTTTGCAGTGGGAGCTTTGGTGTGGAAGAACACCAT 180 Query 181 TATCACAGGGCAATTGCGTTTCTAACCTCCATATCTTTGGTGGATGATATAACTGCTAAT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TATCACAGGGCAATTGCGTTTCTAACCTCCATATCTTTGGTGGATGATATAACTGCTAAT 240 Query 241 TTCAGAGAGAATAAAGCCAATCTAAATATAGGCGACATAGTCAGGTGCTATAGAGACATG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TTCAGAGAGAATAAAGCCAATCTAAATATAGGCGACATAGTCAGGTGCTATAGAGACATG 300 Query 301 AGCGAGATCCAGCTGACTACTCTGCAAGATCTCCTTAGATTCATGCTTACTATCAAATCC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 AGCGAGATCCAGCTGACTACTCTGCAAGATCTCCTTAGATTCATGCTTACTATCAAATCC 360 Query 361 CGAGCCCCGCCCATCAGAATACCCATAGGAAAGATTGAAGCACCTTCTGTTGTGCTTCCA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CGAGCCCCGCCCATCAGAATACCCATAGGAAAGATTGAAGCACCTTCTGTTGTGCTTCCA 420 Query 421 TCGATGAAAGCGTATGGTACACGAGCATGCCCTCAAGTAAAGCAATGTCCTAAAGATAAG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TCGATGAAAGCGTATGGTACACGAGCATGCCCTCAAGTAAAGCAATGTCCTAAAGATAAG 480 Query 481 GAGAAATCAGTGAAATGTCGGAAGTTTGCCCTCCCCCTCCCCTTACAGGCTTGCTTTCAC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 GAGAAATCAGTGAAATGTCGGAAGTTTGCCCTCCCCCTCCCCTTACAGGCTTGCTTTCAC 540 Query 541 TTCCCTTTCCGTAGTAGTATGACTCTTCTGTCCGGGTCTTTCAGATCATAA 591 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 TTCCCTTTCCGTAGTAGTATGACTCTTCTGTCCGGGTCTTTCAGATCATAA 591 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21634218963 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5