BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G07746.1 Length=72 Score E Sequences producing significant alignments: (Bits) Value Ahg319387 jgi|Araly1|319387|fgenesh1_pm.C_scaffold_3002403 134 8e-32 > Ahg319387 jgi|Araly1|319387|fgenesh1_pm.C_scaffold_3002403 Length=522 Score = 134 bits (72), Expect = 8e-32 Identities = 72/72 (100%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 1 TGGAGTATAGCCAAGTGGTAAGGCACCGGTTTTTGGTACCGGCATGCAAAGGTTCGAATC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 389 TGGAGTATAGCCAAGTGGTAAGGCACCGGTTTTTGGTACCGGCATGCAAAGGTTCGAATC 448 Query 61 CTTTTACTCCAG 72 |||||||||||| Sbjct 449 CTTTTACTCCAG 460 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 1911046650 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5