BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G07749.1 Length=2124 Score E Sequences producing significant alignments: (Bits) Value Ahg936832 jgi|Araly1|936832|scaffold_501023.1 56.5 8e-07 > Ahg936832 jgi|Araly1|936832|scaffold_501023.1 Length=312 Score = 56.5 bits (30), Expect = 8e-07 Identities = 32/33 (97%), Gaps = 0/33 (0%) Strand=Plus/Minus Query 1337 CCCTGCTTTAGCTGCACTTGGTGGTTCCCCGCT 1369 |||| |||||||||||||||||||||||||||| Sbjct 150 CCCTACTTTAGCTGCACTTGGTGGTTCCCCGCT 118 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 79913334010 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5