BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G14720.1
Length=2480
Score E
Sequences producing significant alignments: (Bits) Value
Ahg480360 jgi|Araly1|480360|fgenesh2_kg.3__3061__AT2G14720.2 3567 0.0
Ahg931204 jgi|Araly1|931204|scaffold_303661.1 2929 0.0
Ahg938176 jgi|Araly1|938176|scaffold_502367.1 540 2e-152
> Ahg480360 jgi|Araly1|480360|fgenesh2_kg.3__3061__AT2G14720.2
Length=2385
Score = 3567 bits (1931), Expect = 0.0
Identities = 2235/2377 (94%), Gaps = 40/2377 (2%)
Strand=Plus/Plus
Query 1 AAGACGTTAAACAAAC-CATCTCTCGATTCTCTCGG----GAAAACACTCCAACTACGAA 55
|||||||| ||||||| ||||||||||| |||||| |||||||||||||||||||
Sbjct 36 AAGACGTTGAACAAACAAATCTCTCGATTTTCTCGGAAAAAAAAACACTCCAACTACGAA 95
Query 56 TCTACAATCATC--GAGCACATACAAAGAGGAAGATTTCAAATCCAATCATCAATCATCT 113
||| | |||||| ||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 96 TCTTCGATCATCGAGAGCACATACAAAGACGAAGATTTCAAATTCAATCATCAATCATCT 155
Query 114 CTTTTGAATGATCCGATTCCATCTACTTGCTCCTTAAATTTATTGTTGATCCGTTTGAAT 173
|||||| | || | ||| |||||||||||||||| |||||||||| || |||
Sbjct 156 CTTTTG-A--AT--G-----ATC--CTTGCTCCTTAAATTTGTTGTTGATCC-TTCGAA- 201
Query 174 TTGGTGTTTGTTGAGGCGGAGATCTCGAAGATGAAGCAGCTTCTATGTTATCTTCCATGG 233
| ||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 202 --------T-TTGAGACGGAGATCTCGAAGATGAAGCAGCTTCTGTGTTATCTTCCATGG 252
Query 234 CTTCTTCTTCTCTCTCTTGTGGTTTCCCCTTTTAACGAGGCTCGATTCGTTGTGGAGAAG 293
|| |||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||
Sbjct 253 ---CTGCTTCTCTCTCTTCTGGTTTCCCCTTTTAGCGAAGCTCGATTCGTGGTGGAGAAG 309
Query 294 AATAGTTTGTCGGTGACTTCGCCGGAGAGTATAAAAGGAACTCATGATAGTGCAATTGGT 353
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 310 AATAGTTTGTCGGTGACATCGCCGGAGAGTATAAAAGGAACACATGATAGTGCAATTGGT 369
Query 354 AACTTCGGGATTCCTCAGTACGGTGGAAGTATGGCTGGTACGGTGGTTTATCCTAAAGAG 413
||||| ||||||||||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct 370 AACTTTGGGATTCCTCAGTACGGCGGAAGTATGGCCGGAACGGTGGTTTATCCTAAAGAG 429
Query 414 AATCAGAAATCGTGTAAGGAATTTAGCGATTTCTCGATTTCGTTCAAGTCTCAGCCTGGT 473
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 430 AATCAGAAATCGTGTAAGGAGTTTAGCGATTTCTCGATTTCGTTTAAGTCTCAGCCTGGT 489
Query 474 GCTTTACCTACTTTCCTCTTAGTTGATCGTGGAGATTGTTTCTTCGCTTTGAAGGTATGG 533
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 490 GCTTTACCTACTTTCCTCTTGGTTGATCGTGGAGATTGTTTCTTCGCTTTGAAGGTTTGG 549
Query 534 AACGCACAGAAAGCAGGTGCTTCTGCTGTTCTTGTAGCTGATAATGTTGATGAGCCTTTG 593
|| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||
Sbjct 550 AATGCACAGAAAGCGGGTGCTTCTGCTGTTCTTGTGGCTGACAATGTTGATGAACCTTTG 609
Query 594 ATTACAATGGATACACCTGAAGAAGATGTTTCTTCTGCAAAGTATATCGAGAATATTACT 653
||||||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||||
Sbjct 610 ATTACAATGGATACACCTGAAGAGGATGTTTCGTCTGCTAAGTATATTGAGAATATTACT 669
Query 654 ATACCTTCTGCTCTTGTTACTAAAGGTTTTGGTGAAAAGCTGAAGAAAGCTATTAGTGGA 713
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 670 ATACCTTCTGCTCTTGTTACTAAAGGTTTTGGTGAAAAGCTGAAGAAAGCGATTAGTGGA 729
Query 714 GGTGATATGGTTAACTTGAATCTTGACTGGAGAGAGGCTGTTCCACATCCTGATGACCGT 773
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 730 GGTGATATGGTTAACTTGAATCTTGACTGGAGAGAGGCTGTTCCCCACCCTGATGACCGT 789
Query 774 GTTGAGTATGAGTTGTGGACTAATAGTAATGATGAATGTGGGGTTAAGTGTGATATGTTG 833
|||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct 790 GTTGAGTATGAGTTGTGGACCAATAGCAATGATGAATGTGGGGTTAAGTGTGACATGTTG 849
Query 834 ATGGAGTTTGTGAAGGATTTTAAGGGAGCGGCGCAGATTCTTGAGAAAGGCGGTTTTACG 893
|||||||||||||| ||||| ||||| || || ||||||||||||||||| ||||| |||
Sbjct 850 ATGGAGTTTGTGAAAGATTTCAAGGGTGCTGCTCAGATTCTTGAGAAAGGAGGTTTCACG 909
Query 894 CAGTTTAGGCCTCATTATATTACTTGGTATTGTCCTCATGCTTTCACGTTGAGTCGACAG 953
|||||||| |||||||| || || |||||||||||||| |||||||||||||| ||||||
Sbjct 910 CAGTTTAGACCTCATTACATCACCTGGTATTGTCCTCACGCTTTCACGTTGAGCCGACAG 969
Query 954 TGTAAGTCTCAGTGTATCAATAAAGGAAGGTACTGTGCTCCTGATCCAGAGCAGGACTTT 1013
|| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct 970 TGCAAGTCTCAGTGTATCAATAAGGGAAGATACTGTGCTCCTGATCCAGAACAGGACTTC 1029
Query 1014 AGCTCGGGATACGATGGAAAAGACGTGGTTGTGGAAAATTTGAGACAGCTTTGTGTTTAC 1073
||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
Sbjct 1030 AGCTCAGGATACGATGGAAAAGACGTGGTTGTGGAAAACTTGAGACAGCTCTGTGTTTTC 1089
Query 1074 AAGGTGGCGAATGAAACCGGCAAACCTTGGGTCTGGTGGGATTATGTTACTGATTTCCAG 1133
|||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct 1090 AAGGTGGCAAATGAAACCGGCAAACCCTGGGTCTGGTGGGATTACGTCACTGATTTCCAG 1149
Query 1134 ATCAGATGTCCAATGAAGGAGAAAAAATACAACAAAGATTGTGCTGAGTCTGTAATCAAA 1193
||||||||||| ||||||||||| || |||||||||||||||||||||||||| || |||
Sbjct 1150 ATCAGATGTCCCATGAAGGAGAAGAAGTACAACAAAGATTGTGCTGAGTCTGTTATTAAA 1209
Query 1194 TCTCTTGGAATCGATAGCAGAAAAATTGACAAGTGTATGGGAGACCCTGATGCTGACTTG 1253
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1210 TCTCTTGGAATCGATAGTAGAAAAATTGACAAGTGTATGGGAGACCCCGATGCTGACTTG 1269
Query 1254 GACAATCCAGTTTTAAAGGAAGAACAAGATGCTCAAGTTGGCAAGGGTACAAGGGGTGAT 1313
||||| || ||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1270 GACAACCCTGTTCTAAAGGAAGAACAAGACGCTCAAGTTGGCAAGGGTACAAGGGGTGAT 1329
Query 1314 GTTACCATATTGCCTACCTTAGTTGTCAACAACAGACAGTACCGAGGCAAGTTGGAGAAG 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1330 GTTACCATATTGCCTACCTTAGTTGTCAACAACAGACAGTACCGAGGCAAGTTGGAGAAG 1389
Query 1374 AGTGCAGTACTCAAGGCTCTATGCTCTGGTTTTGAGGAGTCAACTGAACCAGCTATATGC 1433
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1390 AGTGCAGTACTCAAGGCTCTTTGCTCTGGTTTTGAGGAGTCAACTGAACCAGCTATATGC 1449
Query 1434 CTCAGCACAGATATGGAGACAAACGAGTGCTTAGATAACAATGGCGGTTGTTGGCAAGAT 1493
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1450 CTCAGCACAGATATGGAGACAAACGAGTGCTTAGATAACAATGGTGGTTGTTGGCAAGAT 1509
Query 1494 AAATCAGCCAACATAACTGCTTGCAAGGATACGTTTCGTGGAAAAGTATGCGTGTGTCCT 1553
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1510 AAATCAGCTAACATAACTGCTTGCAAGGATACGTTTCGTGGAAAAGTATGTGTGTGTCCT 1569
Query 1554 ATAGTTGATGGTGTGCGATTCAAAGGAGATGGTTACAGCCACTGTGAGCCAAGCGGGCCA 1613
||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||
Sbjct 1570 ATAGTTGATGGTGTGAGGTTCAAAGGGGATGGTTACAGCCACTGTGAGCCAAGCGGGCCA 1629
Query 1614 GGGAGATGTACAATCAACAATGGAGGTTGTTGGCATGAAGAGAGAGATGGACATGCGTTC 1673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1630 GGGAGATGTACAATCAACAATGGAGGTTGTTGGCATGAAGAGAGAGATGGACATGCGTTC 1689
Query 1674 TCTGCTTGTGTGGACAAGGACAGTGTGAAATGCGAGTGTCCTCCAGGATTTAAAGGAGAC 1733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1690 TCTGCTTGTGTGGACAAGGACAGTGTGAAATGCGAGTGTCCTCCAGGATTTAAAGGAGAC 1749
Query 1734 GGTGTTAAGAAATGTGAAGACATCAATGAGTGCAAAGAGAAGAAAGCATGTCAGTGCCCG 1793
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 1750 GGTGTTAAGAAATGTGAAGACATTAATGAGTGCAAAGAGAAGAAAGCCTGTCAGTGCCCG 1809
Query 1794 GAATGTAGCTGTAAGAACACCTGGGGAAGCTATGAGTGCTCTTGTAGCGGGGACCTTCTC 1853
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1810 GAATGTAGCTGTAAGAACACCTGGGGAAGTTACGAGTGCTCTTGTAGCGGGGACCTTCTC 1869
Query 1854 TACATGAGAGACCATGACACTTGCATCAGCAAGACGGGTTCACAAGTGAAATCAGCGTGG 1913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1870 TACATGAGAGACCATGACACTTGCATCAGCAAGACGGGTTCACAAGTGAAATCAGCGTGG 1929
Query 1914 GCGGCCGTTTGGCTTATAATGTTATCATTGGGACTTGCAGCTGCTGGTGCATACCTCGTT 1973
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1930 GCGGCCGTTTGGCTTATTATGTTATCATTGGGACTTGCAGCTGCTGGTGCATACCTCGTT 1989
Query 1974 TACAAATATAGATTGAGGCAATACATGGACTCAGAGATCAGAGCCATAATGGCACAGTAC 2033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1990 TACAAATATAGATTGAGGCAATACATGGACTCAGAGATCAGAGCCATAATGGCACAGTAC 2049
Query 2034 ATGCCACTGGACAGCCAACCTGAGGTCCCGAACCACACGAATGATGAACGTGCCTAAGAG 2093
|||||||||||||||||||| ||||||||||||||| |||||||||||| ||||| |||
Sbjct 2050 ATGCCACTGGACAGCCAACCCGAGGTCCCGAACCACGCGAATGATGAACATGCCTGAGA- 2108
Query 2094 AA-CGAAATGGTCCAT----CTATTTATTCCCCCGGAAAGGAATCAATGCGAAGCGTTCT 2148
|| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2109 AAGCGAAATGGTCCATATATCTATTTATTCCCCCGGAAAGGAATCAATGCGAAGCGTTCT 2168
Query 2149 TTTAATTGATGTGGCCCTTGATACCGGTGTTCTTTTT-CGCATCTGTATCTCTGTAACTC 2207
|||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct 2169 TTTAATTGATGTGGCCCTTGATGCCGGTGTTTTTTTTTCGCATCTGTATCTCTGTAACTC 2228
Query 2208 TTTGTACCAAACAGTGTATCCTATGTTCTTGTCAATTGTGTCCATGTGACTTCTGTAATA 2267
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 2229 TTTGTACCAAACAGTGTATCCTATGTTCTTGTCACTTGTGTCCATGTGATTTCTGTAATA 2288
Query 2268 GGGAAACTTCGATGTAGCTACGGAGAACTGGACAAGCTAGTCAATAGAATCAAAACATCA 2327
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2289 GGGAAACTTCGATGTAGCTTCGGAGAACTGGACAAGCTAGTCAATAGAATCAAAACATCA 2348
Query 2328 AAGTGTTAAAGTTAAATCTTTTAGTCTTGGACAAGTT 2364
|||| ||||||||||||||||||| ||||||||||||
Sbjct 2349 AAGTTTTAAAGTTAAATCTTTTAGCCTTGGACAAGTT 2385
> Ahg931204 jgi|Araly1|931204|scaffold_303661.1
Length=1927
Score = 2929 bits (1586), Expect = 0.0
Identities = 1821/1935 (94%), Gaps = 13/1935 (1%)
Strand=Plus/Plus
Query 184 TTGAGGCGGAGATCTCGAAGATGAAGCAGCTTCTA-TGTTATCTTCCATGGCTTCTTCTT 242
||||| ||||||||||||||||||||||||||| | | ||||||||||||| || |||
Sbjct 1 TTGAGACGGAGATCTCGAAGATGAAGCAGCTTC-AGTATTATCTTCCATGG---CTGCTT 56
Query 243 CTCTCTCTTGTGGTTTCC-CCTTTTAACGAGGCTCGATTCGTTGTGGAGAAGAATAGTTT 301
||| ||||| || ||||| || |||| ||| ||||||||||| |||||||||||||||||
Sbjct 57 CTCACTCTTCTGTTTTCCTCC-TTTAGCGAAGCTCGATTCGTGGTGGAGAAGAATAGTTT 115
Query 302 GTCGGTGACTTCGCCGGAGAGTATAAAAGGAACTCATGATAGTGCAATTGGTAACTTCGG 361
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 116 GTCGGTGACATCGCCGGAGAGTATAAAAGGAACACATGATAGTGCAATTGGTAACTTTGG 175
Query 362 GATTCCTCAGTACGGTGGAAGTATGGCTGGTACGGTGGTTTATCCTAAAGAGAATCAGAA 421
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 176 GATTCCTCAGTACGGCGGAAGTATGGCTGGTACAGTGGTTTATCCCAAAGAGAATCAGAA 235
Query 422 ATCGTGTAAGGAATTTAGCGATTTCTCGATTTCGTTCAAGTCTCAGCCTGGTGCTTTACC 481
|||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 236 ATCGTGTAAGGAGTTTAGCGATTTCTCGATTTCGTTCAAGTCACAACCTGGTGCTTTACC 295
Query 482 TACTTTCCTCTTAGTTGATCGTGGAGATTGTTTCTTCGCTTTGAAGGTATGGAACGCACA 541
|||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 296 TACTTTCCTCTTGGTTGATCGTGGAGATTGTTTCTTCGCTTTGAAGGTTTGGAATGCACA 355
Query 542 GAAAGCAGGTGCTTCTGCTGTTCTTGTAGCTGATAATGTTGATGAGCCTTTGATTACAAT 601
|||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 356 GAAAGCGGGTGCGTCTGCTGTTCTTGTGGCTGATAATGTTGATGAACCTTTGATTACAAT 415
Query 602 GGATACACCTGAAGAAGATGTTTCTTCTGCAAAGTATATCGAGAATATTACTATACCTTC 661
||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 416 GGATACACCTGAAGAGGATGTTTCTTCTGCTAAGTATATTGAGAATATTACTATACCTTC 475
Query 662 TGCTCTTGTTACTAAAGGTTTTGGTGAAAAGCTGAAGAAAGCTATTAGTGGAGGTGATAT 721
|||||||||||||||||||||| |||| |||||||||||||| ||||||||||| |||||
Sbjct 476 TGCTCTTGTTACTAAAGGTTTTAGTGAGAAGCTGAAGAAAGCGATTAGTGGAGGGGATAT 535
Query 722 GGTTAACTTGAATCTTGACTGGAGAGAGGCTGTTCCACATCCTGATGACCGTGTTGAGTA 781
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 536 GGTTAACTTGAATCTTGACTGGAGAGAGGCTGTTCCGCATCCTGATGACCGTGTTGAGTA 595
Query 782 TGAGTTGTGGACTAATAGTAATGATGAATGTGGGGTTAAGTGTGATATGTTGATGGAGTT 841
|||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||
Sbjct 596 TGAGTTGTGGACTAATAGCAATGATGAGTGTGGGGTTAAGTGTGACATGTTGATGGAGTT 655
Query 842 TGTGAAGGATTTTAAGGGAGCGGCGCAGATTCTTGAGAAAGGCGGTTTTACGCAGTTTAG 901
|||||| ||||||||||| || || |||||||||||||||||||||||||||||||||||
Sbjct 656 TGTGAAAGATTTTAAGGGTGCTGCTCAGATTCTTGAGAAAGGCGGTTTTACGCAGTTTAG 715
Query 902 GCCTCATTATATTACTTGGTATTGTCCTCATGCTTTCACGTTGAGTCGACAGTGTAAGTC 961
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 716 ACCTCATTATATTACTTGGTATTGTCCTCATGCTTTCACGTTGAGCCGACAGTGTAAGTC 775
Query 962 TCAGTGTATCAATAAAGGAAGGTACTGTGCTCCTGATCCAGAGCAGGACTTTAGCTCGGG 1021
||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 776 TCAGTGTATCAATAAGGGAAGGTACTGCGCTCCTGATCCAGAACAGGACTTTAGCTCGGG 835
Query 1022 ATACGATGGAAAAGACGTGGTTGTGGAAAATTTGAGACAGCTTTGTGTTTACAAGGTGGC 1081
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 836 ATATGATGGAAAAGACGTTGTTGTGGAAAATTTGAGACAGCTTTGTGTTTACAAGGTGGC 895
Query 1082 GAATGAAACCGGCAAACCTTGGGTCTGGTGGGATTATGTTACTGATTTCCAGATCAGATG 1141
|||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 896 GAATGAAACCGGGAAACCCTGGGTCTGGTGGGATTATGTCACTGATTTCCAGATCAGATG 955
Query 1142 TCCAATGAAGGAGAAAAAATACAACAAAGATTGTGCTGAGTCTGTAATCAAATCTCTTGG 1201
||| ||||||||||| ||||||||||| || |||||||| || || ||||||||||||||
Sbjct 956 TCCCATGAAGGAGAAGAAATACAACAAGGAGTGTGCTGATTCCGTTATCAAATCTCTTGG 1015
Query 1202 AATCGATAGCAGAAAAA-TTGACAAGTGTATGGGAGACCCTGATGCTGACTTGGACAATC 1260
||| ||||| | ||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct 1016 AATTGATAGTA-AAAAACTTGACAAGTGTATGGGAGACCCCGATGCTGACTTGGACAATC 1074
Query 1261 CAGTT-TTAAAGGAAGAACAAGATGCTCAAGTTGGCAAGGGTACAAGGGGTGATGTTACC 1319
||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1075 CAGTTCTT-AAGGAAGAACAAGATGCTCAAGTTGGCAAGGGTTCAAGGGGTGATGTTACC 1133
Query 1320 ATATTGCCTACCTTAGTTGTCAACAACAGACAGTACCGAGGCAAGTTGGAGAAGAGTGCA 1379
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1134 ATATTGCCTACCTTAGTTGTCAACAACAGACAGTACCGAGGCAAGTTGGAGAGGAGTGCA 1193
Query 1380 GTACTCAAGGCTCTATGCTCTGGTTTTGAGGAGTCAACTGAACCAGCTATATGCCTCAGC 1439
||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 1194 GTACTGAAGGCTCTATGCTCTGGTTTTGAGGAGACCACTGAACCAGCTATATGCCTCAGC 1253
Query 1440 ACAGATATGGAGACAAACGAGTGCTTAGATAACAATGGCGGTTGTTGGCAAGATAAATCA 1499
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1254 ACAGATGTGGAGTCAAACGAGTGCTTAGATAACAATGGCGGTTGTTGGCAAGATAAATCA 1313
Query 1500 GCCAACATAACTGCTTGCAAGGATACGTTTCGTGGAAAAGTATGCGTGTGTCCTATAGTT 1559
|||||||||||||||||||||||||| |||||||||| |||||||| |||||||| ||||
Sbjct 1314 GCCAACATAACTGCTTGCAAGGATACATTTCGTGGAAGAGTATGCGAGTGTCCTACAGTT 1373
Query 1560 GATGGTGTGCGATTCAAAGGAGATGGTTACAGCCACTGTGAGCCAAGCGGGCCAGGGAGA 1619
|||||||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 1374 GATGGTGTGCAATTCACAGGGGATGGTTACAGCCACTGTGAACCAAGCGGGCCAGGGAGA 1433
Query 1620 TGTACAATCAACAATGGAGGTTGTTGGCATGAAGAGAGAGATGGACATGCGTTCTCTGCT 1679
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1434 TGCACAATCAACAATGGAGGTTGTTGGCATGAAGAGAGAGATGGACATGCGTTCTCTGCT 1493
Query 1680 TGTGTGGACAAGGACAGTGTGAAATGCGAGTGTCCTCCAGGATTTAAAGGAGACGGTGTT 1739
|||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| ||
Sbjct 1494 TGTGTGGACAAGGACAGTGTTAAGTGCCAGTGTCCTCCAGGATTTAAAGGAGACGGTATT 1553
Query 1740 AAGAAATGTGAAGACATCAATGAGTGCAAAGAGAAGAAAGCATGTCAGTGCCCGGAATGT 1799
||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 AAGAAGTGTGAAGATATTAATGAGTGCAAAGAGAAGAAAGCATGTCAGTGCCCGGAATGT 1613
Query 1800 AGCTGTAAGAACACCTGGGGAAGCTATGAGTGCTCTTGTAGCGGGGACCTTCTCTACATG 1859
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1614 AGCTGCAAGAACACCTGGGGAAGCTATGAGTGCTCTTGTAGCGGGGACCTTCTCTACATC 1673
Query 1860 AGAGACCATGACACTTGCATCAGCAAGACGGGTTCACAAGTGAAATCAGCGTGGGCGGCC 1919
||||| ||||||||||||||||||||||| ||| ||||||||| |||||| |||||||||
Sbjct 1674 AGAGATCATGACACTTGCATCAGCAAGACAGGTGCACAAGTGAGATCAGCATGGGCGGCC 1733
Query 1920 GTTTGGCTTATAATGTTATCATTGGGACTTGCAGCTGCTGGTGCATACCTCGTTTACAAA 1979
||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||
Sbjct 1734 GTTTGGCTTATAATGTTATCATTGGGACTTGCAGCTGGTGGGGCGTACCTCGTTTACAAA 1793
Query 1980 TATAGATTGAGGCAATACATGGACTCAGAGATCAGAGCCATAATGGCACAGTACATGCCA 2039
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1794 TATAGATTGAGGCAATACATGGACTCGGAGATCAGAGCCATAATGGCACAGTACATGCCA 1853
Query 2040 CTGGACAGCCAACCTGAGGTCCCGAACCACACGAATGATGAACGTGCCTAAGAGAA-CGA 2098
|||||||||||||| ||||||||||||||| |||||||||||| |||| ||| || | |
Sbjct 1854 CTGGACAGCCAACCGGAGGTCCCGAACCACGTGAATGATGAACGCGCCTGAGA-AAGCAA 1912
Query 2099 AATGGTCCATCTATT 2113
||| |||||||||||
Sbjct 1913 AATAGTCCATCTATT 1927
> Ahg938176 jgi|Araly1|938176|scaffold_502367.1
Length=1913
Score = 540 bits (292), Expect = 2e-152
Identities = 945/1256 (75%), Gaps = 62/1256 (5%)
Strand=Plus/Plus
Query 343 GTGCAATTGGTAACTTCGGGA-TTCCTCAGTACGGTGGAAGTAT-GGCTGGTACGGTGGT 400
|||| ||||| || ||| ||| ||||||| |||||||| | | | | | || || || ||
Sbjct 146 GTGCCATTGGGAATTTC-GGAGTTCCTCAATACGGTGGTACTTTAGTC-GGCACCGTCGT 203
Query 401 TTATCCTAAAGAGAATCAGAAATCGTGT-AAGGAATTTAGCGATTTCTCGAT-T-TCGTT 457
||||||||| ||||||||| | ||| || | | ||||| || ||||| | || ||
Sbjct 204 GTATCCTAAATCCAATCAGAAAGCTTGTAAAAG-CTACAGCGA-TT-TCGATATCTCCTT 260
Query 458 CAAGTCTCAGCCTGGTGC-TTTACCTACTTTCCT-CTTAGTTGATCGTGGAGATTGTTTC 515
||| ||| | ||||| | ||||| ||||| | |||| | |||||||||||||||| |
Sbjct 261 CAAATCTAAACCTGG-ACGATTACCCACTTTTGTCCTTA-TCGATCGTGGAGATTGTTAC 318
Query 516 TTCGCTTTGAAGGTATGGA-ACGCACAGA-AAGCAGGTGCTTCTGCTG-TTCTTGTAGCT 572
||| ||||||| | ||||| | || || | |||| || || |||| | |||||||||||
Sbjct 319 TTCACTTTGAAAGCATGGATA-GCTCA-ACAAGCTGGAGCAGCTGC-GATTCTTGTAGCT 375
Query 573 GATAATGTTGATGAGCCTTTGATTACAATGGATACACCTGAAGAAGATGTTTCTTCTGCA 632
|||| | | |||||| |||||||||||||||||||||||||||||| ||| |||
Sbjct 376 GATAGTAAAGTTGAGCCATTGATTACAATGGATACACCTGAAGAAGATAAATCTGATGCG 435
Query 633 AAGTATAT-CGAGAATATTACTATACCTTCTGCTCTTGTTACTAAAGGTTTTGGTGAAAA 691
| ||| | | | || |||||||| ||||||||||| |||||||| || || || |
Sbjct 436 GATTATCTTCAA-AACATTACTATTCCTTCTGCTCTCATTACTAAAACATTGGGAGACA- 493
Query 692 GC-TGAAGAAAGCTATTAGTGGAGGTGATATGGTTAACTTGAATCTTGACTGGAGAGAGG 750
| | ||| || || || ||||| ||||||||| |||| || || |||| |||
Sbjct 494 GTATAAAGTCTGCGCTTTCCGGTGGTGACATGGTTAACATGAAGCTAGATTGGACTGAGT 553
Query 751 CTGTTCCACATCCTGATGACCGTGTTGAGTATGAGTTGTGGACTAATAGTAATGATGAAT 810
| ||||| ||||||||||| ||||| |||||||| ||||||||||||| |||||||| |
Sbjct 554 CGGTTCCTCATCCTGATGAGCGTGTAGAGTATGAACTGTGGACTAATAGCAATGATGAGT 613
Query 811 GTGGGGTTAAGTGTGATA-TGTTGATGGAGTTTGTGAAGGATTTTAAGGGAGCGGCGCAG 869
||||| |||||||||| | ||| |||||| | || |||| || ||||| || |||
Sbjct 614 GTGGGAAGAAGTGTGATACTCA-GATTGAGTTTCTCAAAAATTTCAAAGGAGCTGCTCAG 672
Query 870 ATTCTTGAGAAAGGCGGTTTTACGCAGTTTAGGCCTCATTATATTACTTGGTATTGTCCT 929
||||||||||| || || ||| ||||| | ||| |||||||| || ||||| ||||||
Sbjct 673 ATTCTTGAGAAGGGTGGGCATACTCAGTTCACGCCACATTATATCACCTGGTACTGTCCT 732
Query 930 CATGCTTTCACGTTGAGTCGACAGTGTAAGTCTCAGTGTATCAATAAAGGAAGGTACTGT 989
| ||||| ||| ||||| |||||| ||||||||||| ||||| | ||||||||||||
Sbjct 733 GAAGCTTTTACGCTGAGTAAACAGTGCAAGTCTCAGTGCATCAACCATGGAAGGTACTGT 792
Query 990 GCTCCTGATCCAGAGCAGGACTTTAGCTC--GGGATACGATGGAAAAGACGTGGTTGTGG 1047
|| |||||||| |||||||| |||| | ||| || |||||||| || || || ||
Sbjct 793 GCGCCTGATCCTGAGCAGGATTTTA-CAAAAGGG-TATGATGGAAAGGATGTTGTCGTTC 850
Query 1048 AAAATTTGA-GACAG-CTTTGTGTTTACA-AGGTGGCGAATGAAACCGGCAAACCTTGGG 1104
| ||| | | | ||| ||| | || |||| || || |||||| | ||| || || ||||
Sbjct 851 AGAATCT-ACGCCAGGCTT-GCGTCTACAGAG-TGATGAATGAGAGCGGTAAGCCGTGGG 907
Query 1105 TCTGGTGGGATTATGTTACTGA-TTT-CCAGATCAGATGTCCAATGAAGGAGAAAAAATA 1162
|||||||||| ||||| ||||| ||| ||| || | ||||||||||||||||| || ||
Sbjct 908 TCTGGTGGGACTATGTGACTGACTTTGCCA--TCCGGTGTCCAATGAAGGAGAAGAAGTA 965
Query 1163 CAACAAAGATTGTGCTGAGTCTG-TAATCAAATCTCTTGGAATCGATAGCAGAAAAATTG 1221
|| ||| || || || || || | || || || ||||| || ||| || | || ||
Sbjct 966 CACCAAGGAATGCGCAGA-TCAAATTATTAAGTCCCTTGGCATTGATCTCA-AGAAGGTG 1023
Query 1222 -ACAAGTGTATGGGAGACCCTGATGCTGACT-TGGACAATCCAGTT-TTAAAGGAAGAAC 1278
|||||||||| ||||||||||| || || | |||| || |||||| |||||| | || |
Sbjct 1024 GACAAGTGTATTGGAGACCCTGAAGCAGA-TGTGGAGAACCCAGTTCTTAAAGCA-GAGC 1081
Query 1279 AAGA-TGCTCAAGTT-GGCAAGGGTACAAGGGGTGATGTTACCATATTGCCTAC-CTTAG 1335
| || | | || | | ||||| ||| | | || || || || ||| | || || ||| |
Sbjct 1082 AGGAGTCC-CA-GATAGGCAAAGGTTCCCGTGGAGACGTGACTATACTCCCAACTCTT-G 1138
Query 1336 TTGTCAACAACAGACAGTACCGAGGCAAGTTGGAGAAGAGTG-CAGTACTCAAGGCTCTA 1394
| || ||||||||||| ||| |||| || ||||| || || | ||||||| || ||| |
Sbjct 1139 TCGTGAACAACAGACAATACAGAGGTAAATTGGAAAA-AGGGGCAGTACTTAAAGCTATG 1197
Query 1395 TGCTCTGGTTTTGAGGAGTCAACTGAACCAGCTATATGCCTCA--GCACAGATATGGAGA 1452
|| || |||||| | |||||||| ||||||||||| || || | | | || | |||| |
Sbjct 1198 TGTTCGGGTTTTCAAGAGTCAACAGAACCAGCTATCTGTCTTACTGAAGAG-T-TGGAAA 1255
Query 1453 CAAACGAGTGCTTAGATAACAATGGCGGTTGTTGGCAAGATAAATCAGCCAACATAACTG 1512
| || || || || || ||||| || || || |||||||| ||||| |||||||| ||||
Sbjct 1256 CTAATGAATGTTTGGAAAACAACGGTGGATGCTGGCAAGACAAATCTGCCAACATTACTG 1315
Query 1513 CTTGCAAGGATACGTTTCGTGGAAAAGTATGCGTGTGTCCTA-TAGTTGATGGTGT 1567
| |||| |||||| ||| | |||| | | || | ||| |||| | ||| | |||||
Sbjct 1316 CATGCAGGGATACTTTTAGGGGAAGATTGTGTGAGTGCCCTACT-GTTCAAGGTGT 1370
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93473461230
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5