BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G14740.1
Length=2173
Score E
Sequences producing significant alignments: (Bits) Value
Ahg931204 jgi|Araly1|931204|scaffold_303661.1 3042 0.0
Ahg480360 jgi|Araly1|480360|fgenesh2_kg.3__3061__AT2G14720.2 2857 0.0
Ahg938176 jgi|Araly1|938176|scaffold_502367.1 584 8e-166
> Ahg931204 jgi|Araly1|931204|scaffold_303661.1
Length=1927
Score = 3042 bits (1647), Expect = 0.0
Identities = 1824/1911 (95%), Gaps = 5/1911 (0%)
Strand=Plus/Plus
Query 1 ATGAAGCAGCTTCTGTGTTACCTTCCATGGCTGCTTCTCCTCACTCTTCTGGTTTCC-CC 59
||||||||||||| || ||| ||||||||||||| | | |||||||||||| ||||| ||
Sbjct 21 ATGAAGCAGCTTCAGTATTATCTTCCATGGCTGC-T-T-CTCACTCTTCTGTTTTCCTCC 77
Query 60 TTTAAACGACGCTCGATTCGTGGTGGAGAAGAACAGTTTGTCCGTGACGTCGCCGGAGAG 119
||| | ||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct 78 TTT-AGCGAAGCTCGATTCGTGGTGGAGAAGAATAGTTTGTCGGTGACATCGCCGGAGAG 136
Query 120 TATAAAAGGAACTCATGATAGTGCAATTGGTAACTTCGGGATTCCTCAATACGGTGGAAG 179
|||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct 137 TATAAAAGGAACACATGATAGTGCAATTGGTAACTTTGGGATTCCTCAGTACGGCGGAAG 196
Query 180 TATGGCTGGTACGGTGGTTTATCCGAAAGAGAATCAGAAATCGTGTAAGGAATTTAGCGA 239
|||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 197 TATGGCTGGTACAGTGGTTTATCCCAAAGAGAATCAGAAATCGTGTAAGGAGTTTAGCGA 256
Query 240 TTTCTCGATTTCGTTCAAGTCTCAGCCTGGTGCTTTACCTACTTTCCTCTTAGTTGATCG 299
||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct 257 TTTCTCGATTTCGTTCAAGTCACAACCTGGTGCTTTACCTACTTTCCTCTTGGTTGATCG 316
Query 300 TGGAGATTGTTTCTTCGCTTTGAAGGTATGGAACGCACAGAAAGCAGGTGCTTCTGCTGT 359
||||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||||
Sbjct 317 TGGAGATTGTTTCTTCGCTTTGAAGGTTTGGAATGCACAGAAAGCGGGTGCGTCTGCTGT 376
Query 360 TCTTGTAGCTGATAATGTTGATGAACCTTTGATTACAATGGATACACCTGAAGAAGATGT 419
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 377 TCTTGTGGCTGATAATGTTGATGAACCTTTGATTACAATGGATACACCTGAAGAGGATGT 436
Query 420 TTCTTCTGCAAAGTATATTGAGAATATTACTATACCTTCTGCTCTTGTTACTAAAGGTTT 479
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 437 TTCTTCTGCTAAGTATATTGAGAATATTACTATACCTTCTGCTCTTGTTACTAAAGGTTT 496
Query 480 TGGTGAAAAGCTGAAGAAAGCTATTAGTGGAGGAGATATGGTTAACTTGAATCTTGACTG 539
| |||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 497 TAGTGAGAAGCTGAAGAAAGCGATTAGTGGAGGGGATATGGTTAACTTGAATCTTGACTG 556
Query 540 GAGAGAGGCTGTTCCGCATCCTGATGACCGTGTTGAGTATGAGTTGTGGACTAATAGTAA 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 557 GAGAGAGGCTGTTCCGCATCCTGATGACCGTGTTGAGTATGAGTTGTGGACTAATAGCAA 616
Query 600 TGATGAATGTGGGGTTAAGTGTGATATGTTGATGGAGTTTGTGAAAGATTTTAAGGGAGC 659
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 617 TGATGAGTGTGGGGTTAAGTGTGACATGTTGATGGAGTTTGTGAAAGATTTTAAGGGTGC 676
Query 660 GGCGCAGATTCTTGAGAAAGGCGGGTTTACGCAGTTTAGACCTCATTATATTACTTGGTA 719
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 677 TGCTCAGATTCTTGAGAAAGGCGGTTTTACGCAGTTTAGACCTCATTATATTACTTGGTA 736
Query 720 TTGTCCTCATGCTTTCACGTTGAGTCGACAGTGTAAGTCTCAGTGTATCAATAAAGGAAG 779
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 737 TTGTCCTCATGCTTTCACGTTGAGCCGACAGTGTAAGTCTCAGTGTATCAATAAGGGAAG 796
Query 780 GTACTGTGCTCCTGATCCAGAGCAGGACTTTAGCTCGGGATACGATGGAAAAGATGTGGT 839
|||||| |||||||||||||| |||||||||||||||||||| ||||||||||| || ||
Sbjct 797 GTACTGCGCTCCTGATCCAGAACAGGACTTTAGCTCGGGATATGATGGAAAAGACGTTGT 856
Query 840 CGTGGAAAACTTGAGACAGCTTTGTGTTTACAAGGTGGCGAATGAAACCGGCAAACCTTG 899
|||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 857 TGTGGAAAATTTGAGACAGCTTTGTGTTTACAAGGTGGCGAATGAAACCGGGAAACCCTG 916
Query 900 GGTCTGGTGGGATTATGTTACTGATTTCCAGATCAGATGTCCCATGAAGGAGAAGAAATA 959
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 917 GGTCTGGTGGGATTATGTCACTGATTTCCAGATCAGATGTCCCATGAAGGAGAAGAAATA 976
Query 960 CAATAAGGAGTGTGCTGATTCCGTTATCAAATCTCTTGGAATTGATAGTAAAAAACTTGA 1019
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 977 CAACAAGGAGTGTGCTGATTCCGTTATCAAATCTCTTGGAATTGATAGTAAAAAACTTGA 1036
Query 1020 CAAGTGTATGGGAGACCCTGATGCTGACTTGGACAATCCAGTTCTTAAGGAAGAACAAGA 1079
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAAGTGTATGGGAGACCCCGATGCTGACTTGGACAATCCAGTTCTTAAGGAAGAACAAGA 1096
Query 1080 TGCTCAAGTTGGCAAGGGTTCAAGGGGTGATGTTACCATATTGCCTACCTTGGTTGTCAA 1139
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1097 TGCTCAAGTTGGCAAGGGTTCAAGGGGTGATGTTACCATATTGCCTACCTTAGTTGTCAA 1156
Query 1140 CAACAGACAGTACCGAGGAAAGTTGGAGAAGAGTGCAGTACTCAAGGCTTTATGCTCTGG 1199
|||||||||||||||||| |||||||||| |||||||||||| |||||| ||||||||||
Sbjct 1157 CAACAGACAGTACCGAGGCAAGTTGGAGAGGAGTGCAGTACTGAAGGCTCTATGCTCTGG 1216
Query 1200 TTTTGAGGAGACCACTGAACCAGCGATATGCCTCAGCACAGATGTGGAGTCAAACGAGTG 1259
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1217 TTTTGAGGAGACCACTGAACCAGCTATATGCCTCAGCACAGATGTGGAGTCAAACGAGTG 1276
Query 1260 CTTAGATAACAATGGTGGTTGTTGGCAAGATAAATCAGCCAACATAACTGCTTGCAAGGA 1319
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1277 CTTAGATAACAATGGCGGTTGTTGGCAAGATAAATCAGCCAACATAACTGCTTGCAAGGA 1336
Query 1320 TACTTTTCGTGGAAGAGTATGCGAGTGTCCTACAGTTGATGGTGTGCAATTCAAAGGGGA 1379
||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1337 TACATTTCGTGGAAGAGTATGCGAGTGTCCTACAGTTGATGGTGTGCAATTCACAGGGGA 1396
Query 1380 TGGTTACAGTCACTGTGAACCAAGCGGGCCAGGGAGATGCACAATCAACAATGGAGGTTG 1439
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1397 TGGTTACAGCCACTGTGAACCAAGCGGGCCAGGGAGATGCACAATCAACAATGGAGGTTG 1456
Query 1440 TTGGCATGAAGAGCGAGATGGACATGCGTTCTCTGCTTGTGTGGACAAGGACAGTGTTAA 1499
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1457 TTGGCATGAAGAGAGAGATGGACATGCGTTCTCTGCTTGTGTGGACAAGGACAGTGTTAA 1516
Query 1500 GTGCGAGTGTCCTCCAGGATTTAAAGGAGATGGTACTAAGAAGTGTGAAGACATTAATGA 1559
|||| ||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct 1517 GTGCCAGTGTCCTCCAGGATTTAAAGGAGACGGTATTAAGAAGTGTGAAGATATTAATGA 1576
Query 1560 GTGCAAAGAGAAGAAAGCATGCCAGTGCCCAGAGTGTAGCTGCAAGAACACATGGGGAAG 1619
||||||||||||||||||||| |||||||| || ||||||||||||||||| ||||||||
Sbjct 1577 GTGCAAAGAGAAGAAAGCATGTCAGTGCCCGGAATGTAGCTGCAAGAACACCTGGGGAAG 1636
Query 1620 CTATGAGTGCTCTTGTAGCGGGGACCTTCTCTACATCAGAGATCATGACACTTGCATCAG 1679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1637 CTATGAGTGCTCTTGTAGCGGGGACCTTCTCTACATCAGAGATCATGACACTTGCATCAG 1696
Query 1680 CAAGACGGGTGCACAAGTGAGATCAGCATGGGCGGCCGTTTGGCTTATAATGTTATCATT 1739
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1697 CAAGACAGGTGCACAAGTGAGATCAGCATGGGCGGCCGTTTGGCTTATAATGTTATCATT 1756
Query 1740 GGGACTTGCAGCTGCTGGTGCATACCTCGTTTACAAATATAGGCTAAGGCAATACATGGA 1799
|||||||||||||| ||| || |||||||||||||||||||| | ||||||||||||||
Sbjct 1757 GGGACTTGCAGCTGGTGGGGCGTACCTCGTTTACAAATATAGATTGAGGCAATACATGGA 1816
Query 1800 CTCAGAGATCAGAGCCATAATGGCACAGTACATGCCATTGGACAGCCAACCCGAGATCCC 1859
||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||
Sbjct 1817 CTCGGAGATCAGAGCCATAATGGCACAGTACATGCCACTGGACAGCCAACCGGAGGTCCC 1876
Query 1860 GAACCACGTGAATGATGAACGCGCCTGAGAAAGCAAAACAGTCCATCTATT 1910
|||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1877 GAACCACGTGAATGATGAACGCGCCTGAGAAAGCAAAATAGTCCATCTATT 1927
> Ahg480360 jgi|Araly1|480360|fgenesh2_kg.3__3061__AT2G14720.2
Length=2385
Score = 2857 bits (1547), Expect = 0.0
Identities = 1864/2017 (92%), Gaps = 21/2017 (1%)
Strand=Plus/Plus
Query 1 ATGAAGCAGCTTCTGTGTTACCTTCCATGGCTGCTTCTCCTCACTCTTCTGGTTTCCCCT 60
|||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct 223 ATGAAGCAGCTTCTGTGTTATCTTCCATGGCTGCTTCT-CT--CTCTTCTGGTTTCCCCT 279
Query 61 TTAAACGACGCTCGATTCGTGGTGGAGAAGAACAGTTTGTCCGTGACGTCGCCGGAGAGT 120
|| | ||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct 280 TTTAGCGAAGCTCGATTCGTGGTGGAGAAGAATAGTTTGTCGGTGACATCGCCGGAGAGT 339
Query 121 ATAAAAGGAACTCATGATAGTGCAATTGGTAACTTCGGGATTCCTCAATACGGTGGAAGT 180
||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 340 ATAAAAGGAACACATGATAGTGCAATTGGTAACTTTGGGATTCCTCAGTACGGCGGAAGT 399
Query 181 ATGGCTGGTACGGTGGTTTATCCGAAAGAGAATCAGAAATCGTGTAAGGAATTTAGCGAT 240
||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 400 ATGGCCGGAACGGTGGTTTATCCTAAAGAGAATCAGAAATCGTGTAAGGAGTTTAGCGAT 459
Query 241 TTCTCGATTTCGTTCAAGTCTCAGCCTGGTGCTTTACCTACTTTCCTCTTAGTTGATCGT 300
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 460 TTCTCGATTTCGTTTAAGTCTCAGCCTGGTGCTTTACCTACTTTCCTCTTGGTTGATCGT 519
Query 301 GGAGATTGTTTCTTCGCTTTGAAGGTATGGAACGCACAGAAAGCAGGTGCTTCTGCTGTT 360
|||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||
Sbjct 520 GGAGATTGTTTCTTCGCTTTGAAGGTTTGGAATGCACAGAAAGCGGGTGCTTCTGCTGTT 579
Query 361 CTTGTAGCTGATAATGTTGATGAACCTTTGATTACAATGGATACACCTGAAGAAGATGTT 420
||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 580 CTTGTGGCTGACAATGTTGATGAACCTTTGATTACAATGGATACACCTGAAGAGGATGTT 639
Query 421 TCTTCTGCAAAGTATATTGAGAATATTACTATACCTTCTGCTCTTGTTACTAAAGGTTTT 480
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 640 TCGTCTGCTAAGTATATTGAGAATATTACTATACCTTCTGCTCTTGTTACTAAAGGTTTT 699
Query 481 GGTGAAAAGCTGAAGAAAGCTATTAGTGGAGGAGATATGGTTAACTTGAATCTTGACTGG 540
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 700 GGTGAAAAGCTGAAGAAAGCGATTAGTGGAGGTGATATGGTTAACTTGAATCTTGACTGG 759
Query 541 AGAGAGGCTGTTCCGCATCCTGATGACCGTGTTGAGTATGAGTTGTGGACTAATAGTAAT 600
|||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct 760 AGAGAGGCTGTTCCCCACCCTGATGACCGTGTTGAGTATGAGTTGTGGACCAATAGCAAT 819
Query 601 GATGAATGTGGGGTTAAGTGTGATATGTTGATGGAGTTTGTGAAAGATTTTAAGGGAGCG 660
||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||
Sbjct 820 GATGAATGTGGGGTTAAGTGTGACATGTTGATGGAGTTTGTGAAAGATTTCAAGGGTGCT 879
Query 661 GCGCAGATTCTTGAGAAAGGCGGGTTT-ACGCAGTTTAGACCTCATTATATTACTTGGTA 719
|| ||||||||||||||||| || ||| |||||||||||||||||||| || || |||||
Sbjct 880 GCTCAGATTCTTGAGAAAGGAGG-TTTCACGCAGTTTAGACCTCATTACATCACCTGGTA 938
Query 720 TTGTCCTCATGCTTTCACGTTGAGTCGACAGTGTAAGTCTCAGTGTATCAATAAAGGAAG 779
||||||||| |||||||||||||| |||||||| |||||||||||||||||||| |||||
Sbjct 939 TTGTCCTCACGCTTTCACGTTGAGCCGACAGTGCAAGTCTCAGTGTATCAATAAGGGAAG 998
Query 780 GTACTGTGCTCCTGATCCAGAGCAGGACTTTAGCTCGGGATACGATGGAAAAGATGTGGT 839
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||
Sbjct 999 ATACTGTGCTCCTGATCCAGAACAGGACTTCAGCTCAGGATACGATGGAAAAGACGTGGT 1058
Query 840 CGTGGAAAACTTGAGACAGCTTTGTGTTTACAAGGTGGCGAATGAAACCGGCAAACCTTG 899
|||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||| ||
Sbjct 1059 TGTGGAAAACTTGAGACAGCTCTGTGTTTTCAAGGTGGCAAATGAAACCGGCAAACCCTG 1118
Query 900 GGTCTGGTGGGATTATGTTACTGATTTCCAGATCAGATGTCCCATGAAGGAGAAGAAATA 959
||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1119 GGTCTGGTGGGATTACGTCACTGATTTCCAGATCAGATGTCCCATGAAGGAGAAGAAGTA 1178
Query 960 CAATAAGGAGTGTGCTGATTCCGTTATCAAATCTCTTGGAATTGATAGTA-AAAAACTTG 1018
||| || || |||||||| || ||||| |||||||||||||| ||||||| ||||| |||
Sbjct 1179 CAACAAAGATTGTGCTGAGTCTGTTATTAAATCTCTTGGAATCGATAGTAGAAAAA-TTG 1237
Query 1019 ACAAGTGTATGGGAGACCCTGATGCTGACTTGGACAATCCAGTTCTTAAGGAAGAACAAG 1078
||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||||||
Sbjct 1238 ACAAGTGTATGGGAGACCCCGATGCTGACTTGGACAACCCTGTTCTAAAGGAAGAACAAG 1297
Query 1079 ATGCTCAAGTTGGCAAGGGTTCAAGGGGTGATGTTACCATATTGCCTACCTTGGTTGTCA 1138
| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 1298 ACGCTCAAGTTGGCAAGGGTACAAGGGGTGATGTTACCATATTGCCTACCTTAGTTGTCA 1357
Query 1139 ACAACAGACAGTACCGAGGAAAGTTGGAGAAGAGTGCAGTACTCAAGGCT-TTATGCTCT 1197
||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||
Sbjct 1358 ACAACAGACAGTACCGAGGCAAGTTGGAGAAGAGTGCAGTACTCAAGGCTCTT-TGCTCT 1416
Query 1198 GGTTTTGAGGAGACCACTGAACCAGCGATATGCCTCAGCACAGATGTGGAGTCAAACGAG 1257
|||||||||||| | ||||||||||| |||||||||||||||||| ||||| ||||||||
Sbjct 1417 GGTTTTGAGGAGTCAACTGAACCAGCTATATGCCTCAGCACAGATATGGAGACAAACGAG 1476
Query 1258 TGCTTAGATAACAATGGTGGTTGTTGGCAAGATAAATCAGCCAACATAACTGCTTGCAAG 1317
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1477 TGCTTAGATAACAATGGTGGTTGTTGGCAAGATAAATCAGCTAACATAACTGCTTGCAAG 1536
Query 1318 GATACTTTTCGTGGAAGAGTATGCGAGTGTCCTACAGTTGATGGTGTGCAA-TTCAAAGG 1376
||||| |||||||||| |||||| | |||||||| ||||||||||||| | ||||||||
Sbjct 1537 GATACGTTTCGTGGAAAAGTATGTGTGTGTCCTATAGTTGATGGTGTG-AGGTTCAAAGG 1595
Query 1377 GGATGGTTACAGTCACTGTGAACCAAGCGGGCCAGGGAGATGCACAATCAACAATGGAGG 1436
|||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1596 GGATGGTTACAGCCACTGTGAGCCAAGCGGGCCAGGGAGATGTACAATCAACAATGGAGG 1655
Query 1437 TTGTTGGCATGAAGAGCGAGATGGACATGCGTTCTCTGCTTGTGTGGACAAGGACAGTGT 1496
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1656 TTGTTGGCATGAAGAGAGAGATGGACATGCGTTCTCTGCTTGTGTGGACAAGGACAGTGT 1715
Query 1497 TAAGTGCGAGTGTCCTCCAGGATTTAAAGGAGATGGTACTAAGAAGTGTGAAGACATTAA 1556
|| ||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||
Sbjct 1716 GAAATGCGAGTGTCCTCCAGGATTTAAAGGAGACGGTGTTAAGAAATGTGAAGACATTAA 1775
Query 1557 TGAGTGCAAAGAGAAGAAAGCATGCCAGTGCCCAGAGTGTAGCTGCAAGAACACATGGGG 1616
||||||||||||||||||||| || |||||||| || |||||||| |||||||| |||||
Sbjct 1776 TGAGTGCAAAGAGAAGAAAGCCTGTCAGTGCCCGGAATGTAGCTGTAAGAACACCTGGGG 1835
Query 1617 AAGCTATGAGTGCTCTTGTAGCGGGGACCTTCTCTACATCAGAGATCATGACACTTGCAT 1676
||| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1836 AAGTTACGAGTGCTCTTGTAGCGGGGACCTTCTCTACATGAGAGACCATGACACTTGCAT 1895
Query 1677 CAGCAAGACGGGTGCACAAGTGAGATCAGCATGGGCGGCCGTTTGGCTTATAATGTTATC 1736
||||||||||||| ||||||||| |||||| |||||||||||||||||||| ||||||||
Sbjct 1896 CAGCAAGACGGGTTCACAAGTGAAATCAGCGTGGGCGGCCGTTTGGCTTATTATGTTATC 1955
Query 1737 ATTGGGACTTGCAGCTGCTGGTGCATACCTCGTTTACAAATATAGGCTAAGGCAATACAT 1796
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1956 ATTGGGACTTGCAGCTGCTGGTGCATACCTCGTTTACAAATATAGATTGAGGCAATACAT 2015
Query 1797 GGACTCAGAGATCAGAGCCATAATGGCACAGTACATGCCATTGGACAGCCAACCCGAGAT 1856
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 2016 GGACTCAGAGATCAGAGCCATAATGGCACAGTACATGCCACTGGACAGCCAACCCGAGGT 2075
Query 1857 CCCGAACCACGTGAATGATGAACGCGCCTGAGAAAGCAAAACAGTCCAT----CTATTTA 1912
||||||||||| ||||||||||| |||||||||||| ||| |||||| |||||||
Sbjct 2076 CCCGAACCACGCGAATGATGAACATGCCTGAGAAAGCGAAATGGTCCATATATCTATTTA 2135
Query 1913 TTCCCCGGGAA-GGACCCAAGGTGACA-CGTTCTTTTAACTGATGTGGCCCTTAACGACG 1970
|||||| |||| ||| ||| | || | ||||||||||| ||||||||||||| | | ||
Sbjct 2136 TTCCCCCGGAAAGGAATCAATGCGA-AGCGTTCTTTTAATTGATGTGGCCCTTGATGCCG 2194
Query 1971 ATGTTTTCT---CGCCTCTGTATCTTTGTAACTCttt 2004
|||||| | ||| ||||||||| |||||||||||
Sbjct 2195 GTGTTTTTTTTTCGCATCTGTATCTCTGTAACTCTTT 2231
> Ahg938176 jgi|Araly1|938176|scaffold_502367.1
Length=1913
Score = 584 bits (316), Expect = 8e-166
Identities = 972/1285 (76%), Gaps = 60/1285 (5%)
Strand=Plus/Plus
Query 140 GTGCAATTGGTAACTTCGGGA-TTCCTCAATACGGTGGAAGTAT-GGCTGGTACGGTGGT 197
|||| ||||| || ||| ||| |||||||||||||||| | | | | | || || || ||
Sbjct 146 GTGCCATTGGGAATTTC-GGAGTTCCTCAATACGGTGGTACTTTAGTC-GGCACCGTCGT 203
Query 198 TTATCCGAAAGAGAATCAGAAATCGTGT-AAGGAATTTAGCGATTTCTCGAT-T-TCGTT 254
||||| ||| ||||||||| | ||| || | | ||||| || ||||| | || ||
Sbjct 204 GTATCCTAAATCCAATCAGAAAGCTTGTAAAAG-CTACAGCGA-TT-TCGATATCTCCTT 260
Query 255 CAAGTCTCAGCCTGGTGC-TTTACCTACTTTCCT-CTTAGTTGATCGTGGAGATTGTTTC 312
||| ||| | ||||| | ||||| ||||| | |||| | |||||||||||||||| |
Sbjct 261 CAAATCTAAACCTGG-ACGATTACCCACTTTTGTCCTTA-TCGATCGTGGAGATTGTTAC 318
Query 313 TTCGCTTTGAAGGTATGGA-ACGCACAGA-AAGCAGGTGCTTCTGCTG-TTCTTGTAGCT 369
||| ||||||| | ||||| | || || | |||| || || |||| | |||||||||||
Sbjct 319 TTCACTTTGAAAGCATGGATA-GCTCA-ACAAGCTGGAGCAGCTGC-GATTCTTGTAGCT 375
Query 370 GATAATGTTGATGAACCTTTGATTACAATGGATACACCTGAAGAAGATGTTTCTTCTGCA 429
|||| | | ||| || |||||||||||||||||||||||||||||| ||| |||
Sbjct 376 GATAGTAAAGTTGAGCCATTGATTACAATGGATACACCTGAAGAAGATAAATCTGATGCG 435
Query 430 AAGTATATTGAGAATATTACTATACCTTCTGCTCTTGTTACTAAAGGTTTTGGTGAAAAG 489
| ||| || | || |||||||| ||||||||||| |||||||| || || || | |
Sbjct 436 GATTATCTTCAAAACATTACTATTCCTTCTGCTCTCATTACTAAAACATTGGGAGACA-G 494
Query 490 C-TGAAGAAAGCTATTAGTGGAGGAGATATGGTTAACTTGAATCTTGACTGGAGAGAGGC 548
| ||| || || || || || ||||||||| |||| || || |||| ||| |
Sbjct 495 TATAAAGTCTGCGCTTTCCGGTGGTGACATGGTTAACATGAAGCTAGATTGGACTGAGTC 554
Query 549 TGTTCCGCATCCTGATGACCGTGTTGAGTATGAGTTGTGGACTAATAGTAATGATGAATG 608
||||| ||||||||||| ||||| |||||||| ||||||||||||| |||||||| ||
Sbjct 555 GGTTCCTCATCCTGATGAGCGTGTAGAGTATGAACTGTGGACTAATAGCAATGATGAGTG 614
Query 609 TGGGGTTAAGTGTGATA-TGTTGATGGAGTTTGTGAAAGATTTTAAGGGAGCGGCGCAGA 667
|||| |||||||||| | ||| |||||| | ||| |||| || ||||| || ||||
Sbjct 615 TGGGAAGAAGTGTGATACTCA-GATTGAGTTTCTCAAAAATTTCAAAGGAGCTGCTCAGA 673
Query 668 TTCTTGAGAAAGGCGGGTTTACGCAGTTTA-GACCTCATTATATTACTTGGTATTGTCCT 726
|||||||||| || ||| ||| ||||| | | || |||||||| || ||||| ||||||
Sbjct 674 TTCTTGAGAAGGGTGGGCATACTCAGTTCACG-CCACATTATATCACCTGGTACTGTCCT 732
Query 727 CATGCTTTCACGTTGAGTCGACAGTGTAAGTCTCAGTGTATCAATAAAGGAAGGTACTGT 786
| ||||| ||| ||||| |||||| ||||||||||| ||||| | ||||||||||||
Sbjct 733 GAAGCTTTTACGCTGAGTAAACAGTGCAAGTCTCAGTGCATCAACCATGGAAGGTACTGT 792
Query 787 GCTCCTGATCCAGAGCAGGACTTTAGCTC--GGGATACGATGGAAAAGATGTGGTCGTGG 844
|| |||||||| |||||||| |||| | ||| || |||||||| ||||| |||||
Sbjct 793 GCGCCTGATCCTGAGCAGGATTTTA-CAAAAGGG-TATGATGGAAAGGATGTTGTCGTTC 850
Query 845 AAAA-CTTGAGACAG-CTTTGTGTTTACA-AGGTGGCGAATGAAACCGGCAAACCTTGGG 901
| || || | ||| ||| | || |||| || || |||||| | ||| || || ||||
Sbjct 851 AGAATCTAC-GCCAGGCTT-GCGTCTACAGAG-TGATGAATGAGAGCGGTAAGCCGTGGG 907
Query 902 TCTGGTGGGATTATGTTACTGA-TTT-CCAGATCAGATGTCCCATGAAGGAGAAGAAATA 959
|||||||||| ||||| ||||| ||| ||| || | ||||| |||||||||||||| ||
Sbjct 908 TCTGGTGGGACTATGTGACTGACTTTGCCA--TCCGGTGTCCAATGAAGGAGAAGAAGTA 965
Query 960 CAATAAGGAGTGTGCTGATTCCG-TTATCAAATCTCTTGGAATTGATAGTAAAAAACTTG 1018
|| ||||| || || ||| | |||| || || ||||| |||||| | || || ||
Sbjct 966 CACCAAGGAATGCGCAGAT-CAAATTATTAAGTCCCTTGGCATTGATC-TCAAGAAGGTG 1023
Query 1019 -ACAAGTGTATGGGAGACCCTGATGCTGACT-TGGACAATCCAGTTCTTAAGGAAGAACA 1076
|||||||||| ||||||||||| || || | |||| || ||||||||||| | ||| ||
Sbjct 1024 GACAAGTGTATTGGAGACCCTGAAGCAGA-TGTGGAGAACCCAGTTCTTAAAGCAGAGCA 1082
Query 1077 AGA-TGCTCAAGTT-GGCAAGGGTTCAAGGGGTGATGTTACCATATTGCCTAC-CTTGGT 1133
|| | | || | | ||||| ||||| | || || || || ||| | || || |||| |
Sbjct 1083 GGAGTCC-CA-GATAGGCAAAGGTTCCCGTGGAGACGTGACTATACTCCCAACTCTTG-T 1139
Query 1134 TGTCAACAACAGACAGTACCGAGG-AAAGTTGGAGAAGAGTG-CAGTACTCAAGGCTTTA 1191
|| ||||||||||| ||| |||| ||| ||||| || || | ||||||| || ||| |
Sbjct 1140 CGTGAACAACAGACAATACAGAGGTAAA-TTGGAAAA-AGGGGCAGTACTTAAAGCTATG 1197
Query 1192 TGCTCTGGTTTTGAGGAGACCACTGAACCAGCGATATGCCTCAGCACA-GATGT-GGAGT 1249
|| || |||||| | ||| | || |||||||| || || || | | | || || |||
Sbjct 1198 TGTTCGGGTTTTCAAGAGTCAACAGAACCAGCTATCTGTCTTA-CTGAAGA-GTTGGAAA 1255
Query 1250 CAAACGAGTGCTTAGATAACAATGGTGGTTGTTGGCAAGATAAATCAGCCAACATAACTG 1309
| || || || || || ||||| ||||| || |||||||| ||||| |||||||| ||||
Sbjct 1256 CTAATGAATGTTTGGAAAACAACGGTGGATGCTGGCAAGACAAATCTGCCAACATTACTG 1315
Query 1310 CTTGCAAGGATACTTTTCGTGGAAGAGTATGCGAGTGTCCTACAGTTGATGGTGTGCAAT 1369
| |||| |||||||||| | |||||| | || ||||| ||||| ||| | ||||| |||
Sbjct 1316 CATGCAGGGATACTTTTAGGGGAAGATTGTGTGAGTGCCCTACTGTTCAAGGTGTTAAAT 1375
Query 1370 TCAAAGGGGATGGTTACAGTCACTG 1394
| || || ||||||||||||||
Sbjct 1376 TTGTTGGTGACGGTTACAGTCACTG 1400
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81779756015
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5