BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G15370.1
Length=1602
Score E
Sequences producing significant alignments: (Bits) Value
Ahg906274 jgi|Araly1|906274|Al_scaffold_0003_3402 2185 0.0
Ahg480406 jgi|Araly1|480406|fgenesh2_kg.3__3107__AT2G15390.2 1530 0.0
Ahg312409 jgi|Araly1|312409|fgenesh1_pm.C_scaffold_1001189 1177 0.0
> Ahg906274 jgi|Araly1|906274|Al_scaffold_0003_3402
Length=1605
Score = 2185 bits (1183), Expect = 0.0
Identities = 1475/1615 (91%), Gaps = 23/1615 (1%)
Strand=Plus/Plus
Query 1 ATGTATCAAAAATTTCAGATCT-CCGGCAAAA-TTGTTAAGACTTTGGGGCTAAAGATGA 58
|||||||| | ||||||||| | || | |||| || | ||| | |||||| | |||| ||
Sbjct 1 ATGTATCACATATTTCAGATTTACC-GAAAAAGTT-TCAAGGCATTGGGGTTGAAGAAGA 58
Query 59 AAGTTCTGATAGCAGTC-TCCTTTGGTTCCTTACTATTTATACTATCATACTCAAACAAC 117
|| |||||||||||||| | |||||||| |||| || |||||||||||| ||||||||||
Sbjct 59 AAATTCTGATAGCAGTCGT-CTTTGGTTGCTTAGTAATTATACTATCATTCTCAAACAAC 117
Query 118 TTTAACAA-CAAACTTCTTGATGCTACAACCAAAGTAGACATA-AAGGAAACCGAAAAAC 175
|| ||||| |||| ||||| ||| ||||||| || ||| ||| || ||| |||||| ||
Sbjct 118 TTCAACAACCAAA-TTCTTAATGATACAACC-AA--AGATATAGAA-GAATCCGAAAGAC 172
Query 176 CGGTGGATAAACTTATAGGAGGGCTTTTAACTGCGGATTTTGATGAAGGTTCTTGCTTGA 235
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 173 CGGTGGATAAACTTATAGGAGGGCTTTTAACTGCGGATTTCGATGAAGGATCTTGCTTGA 232
Query 236 GTAGGTATCATAAATA-TTTCTTGTACCGCAAGCCATCCCCGTACAAGCCTTCTGAATAT 294
|||||||||||||| | |||||||||||||||||| ||||| || |||||||||||||||
Sbjct 233 GTAGGTATCATAAA-ACTTTCTTGTACCGCAAGCCTTCCCCATATAAGCCTTCTGAATAT 291
Query 295 CTAGTCTCTAAGCTCAGAAGCTATGAGATGCTTCACAAACGTTGTGGTCCAGATACAGAA 354
|| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 292 CTCGTCTCTAAGCTTAGAAGCTATGAGATGCTTCACAAACGTTGCGGTCCAGATACAAAA 351
Query 355 TATTACAAAGAAGCAATAGAGAAACTTAGTCGTGATGA-T-----GCAAGCGAATCAAAT 408
|||||||||||||| ||||||||||||||| ||||| | ||||||||| |||||
Sbjct 352 GCTTACAAAGAAGCAACAGAGAAACTTAGTCGCGATGAGTATTATGCAAGCGAAGCAAAT 411
Query 409 GGTGAATGCAGATACATTGTATGGGTGGCAGGTTACGGGCTTGGAAACAGATTACTTACT 468
|||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct 412 GGTGAATGTAGATACATTGTGTGGGTCGCAGGTTACGGGCTTGGAAATAGATTACTTACT 471
Query 469 CTTGCTTCTGTTTTCCTCTACGCTCTCTTGACCGAGAGAATCATTCTTGTCGACAACCGC 528
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 472 CTTGCTTCTGTGTTCCTCTACGCTCTCTTGACCGAGAGAATCATTCTTGTTGACAACCGC 531
Query 529 AAGGATGTTAGTGATCTCTTATGCGAGCCATTTCCAGGTACTTCATGGTTGCTTCCGCTT 588
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 532 AAGGATGTTAGTGATCTCTTATGCGAGCCATTCCCAGGTACTTCATGGTTGCTTCCTCTT 591
Query 589 GACTTTCCAATGCTGAATTATACTTATGCTTGGGGCTACAATAAGGAATATCCTCGTTGT 648
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 592 GACTTTCCAATGTTGAATTATACTTATGCTTGGGGCTACAATAAGGAATACCCTCGTTGT 651
Query 649 TACGGAACAATGTCTGAAAAACATTCCATCAACTCGACTTCAATCCCGCCGCATCTATAC 708
|| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 652 TATGGAACAATGGAGGAAAATCATTCCATCAACTCGACTTCAATCCCGCCCCATCTATAC 711
Query 709 ATGCATAACCTTCATGATTCAAGGGATAGTGATAAGCTGTTTGTATGCCAAAAGGATCAA 768
||||||||||| |||||||||||||||||||||||| |||| | |||||||||||||||
Sbjct 712 ATGCATAACCTCCATGATTCAAGGGATAGTGATAAGTTGTTCATCTGCCAAAAGGATCAA 771
Query 769 AGTTTGATTGACAAAGTCCCATGGTTGATTGTTCAAGCCAATGTTTACTTTGTTCCATCG 828
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 772 AGTTTGATCGACAAAGTCCCTTGGTTGATTGTTCAAGCCAATGTTTACTTTGTTCCATCT 831
Query 829 TTATGGTTTAATCCAACTTTCCAAACCGAACTAGTTAAGCTGTTCCCGCAGAAAGAAACC 888
|||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 832 TTATGGTTCAATCCAAATTTCCAAACCGAACTAGTTAAGCTGTTTCCGCAGAAAGACACC 891
Query 889 GTCTTTCACCACTTGGCTCGGTATCTTTTTCACCCTACAAATGAAGTTTGGGATATGGTC 948
||||||||||| |||||||||||||||||||| || |||||| |||||||||||||||||
Sbjct 892 GTCTTTCACCATTTGGCTCGGTATCTTTTTCATCCGACAAATCAAGTTTGGGATATGGTC 951
Query 949 ACTGACTACTACCACGCTCATTTGTCGAAAGCCGACGAGAGACTCGGGATTCAAATAAGG 1008
||| | |||||| | |||||||| || ||||| ||||||||||| |||||||||||| ||
Sbjct 952 ACTAAGTACTACGATGCTCATTTATCCAAAGCAGACGAGAGACTTGGGATTCAAATACGG 1011
Query 1009 GTTTTCGGCAAACCTGATGGACGTTTCAAACATGTCATTGACCAGGTCATATCATGTACA 1068
||||| ||||||||| |||| |||| |||||||||| ||||| ||| || ||||||||
Sbjct 1012 GTTTTTGGCAAACCTTCTGGATTTTTCCAACATGTCATGGACCAAGTCGTAGCATGTACA 1071
Query 1069 CAAAGAGAGAAACTGTTACCTGAATTTGCTACACCAGAGGAATCAAAAGTCAATATATCA 1128
||||| ||||||||||| |||||||||||||||| ||| |||| ||||||||| |||||
Sbjct 1072 CAAAGGGAGAAACTGTTGCCTGAATTTGCTACACAAGAAGAATTAAAAGTCAACATATCG 1131
Query 1129 AAAACCCCGAAACTCAAATCTGTTCTTGTCGCATCTCTCTATCCAGAGTTCTCTGGCAAC 1188
|||||||||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||
Sbjct 1132 AAAACCCCGAAACTTAAAGCTGTTCTTGTGGCATCTCTCTATCCAGAGTACTCTGGCAAC 1191
Query 1189 TTAACTAACATGTTTTCAAAGCGACCAAGTTCAACAGGAGAAATTGTTGAAGTTTATCAA 1248
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1192 TTAACGAACATGTTTTCGAAGCGACCAAGTTCAACAGGAGAAATTGTTGAAGTTTATCAG 1251
Query 1249 CCAAGTGGAGAGAGAGTTCAGCAAACAGACAAGAAAAGT-CACGACCAAAAGGCGCTTGC 1307
||||||||||| ||||||||||||||||||||||| | | || |||||||||||||||||
Sbjct 1252 CCAAGTGGAGAAAGAGTTCAGCAAACAGACAAGAAGA-TACATGACCAAAAGGCGCTTGC 1310
Query 1308 TGAGATGTATCTTTTGAGCTTAACCGATAACATTGTCACGAGCGCAAGGTCTACATTTGG 1367
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1311 TGAAATGTATCTTTTGAGCTTAACCGATAACATTGTCACAAGCGCAAGGTCTACATTTGG 1370
Query 1368 ATATGTTTCATATAGTCTTGGAGGATTAAAGCCATGGTTACTTTATCAGCCAACAAATTT 1427
||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 1371 ATATGTTTCTTATAGTCTTGGAGGACTAAGGCCATGGTTACTTTATCAGCCAACAAATTT 1430
Query 1428 CACCACTCCTAATCCGCCATGTGTTCGATCTAAGTCGATGGAGCCATGTTACCTAACTCC 1487
||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1431 CACAACTCCTAATCCGCCGTGTGTTCGATCCAAGTCGATGGAGCCATGTTACCTTACTCC 1490
Query 1488 TCCGTCTCATGGATGTGAAGCTGACTGGGGAACTAACTCGGGGAAGATTCTTCCTTTTGT 1547
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1491 TCCGTCTCATGGATGTGAAGCTGACTCGGGAAAAAACTCGGGGAAGATTCTTCCTTTTGT 1550
Query 1548 TAGGCATTGTGAGGATCTTATATATGGGGGGCTTAAGCTATATGATGAATTTTAG 1602
|||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 1551 TAGGCATTGTGAGGATATTATGTATGGGGGGCTTAAGCTATATGATGAATTTTAG 1605
> Ahg480406 jgi|Araly1|480406|fgenesh2_kg.3__3107__AT2G15390.2
Length=1783
Score = 1530 bits (828), Expect = 0.0
Identities = 1384/1642 (84%), Gaps = 80/1642 (5%)
Strand=Plus/Plus
Query 1 ATGTATCAAAAATTTCAGATCTCCGGCAAAATTGTTAAGACTTTGGGGCTAAAGATGAAA 60
|||||||| | |||||||||||||||| || || | ||| |||||||| | |||| ||||
Sbjct 105 ATGTATCATATATTTCAGATCTCCGGCGAAGTTATCAAGGCTTTGGGGTTGAAGACGAAA 164
Query 61 GTTCTGATAGCAGTC-TCCTTTGGTTCCTTACT-A-----T-T-T-A---TACTATCATA 107
|||||||| ||||| | |||| || ||||||| | | | | | || |||| |
Sbjct 165 ATTCTGATAACAGTCGT-CTTTAGTACCTTACTAATTTTGTCTGTAATGTTATTATCGTT 223
Query 108 CTCAAACAACTTTAACAACAAACTTCTTGATGCTACAACCAAAGTAGACATAAAGGAAAC 167
|||||||||||| ||||| |||||| ||| |||||||| | || | || ||| |
Sbjct 224 CTCAAACAACTTCAACAATAAACTTTTTGCTGCTACAATC-AA--CG--AT----GAATC 274
Query 168 CGAAAAACCGGTGGATAAACTTATAGGAGGGCTTTTAACTGCGGATTTTGATGAAGGTTC 227
||||| ||||| ||||||||| ||||||||||||||||| |||||||| |||||||| ||
Sbjct 275 CGAAACACCGGGGGATAAACTGATAGGAGGGCTTTTAACCGCGGATTTCGATGAAGGATC 334
Query 228 TTGCTTGAGTAGGTATCATAAATATTTCTTGTACCGCAAGCCATCCCCGTACAAGCCTTC 287
|||||||||||||||||||||| ||||||||||||||||||| || || |||||||||||
Sbjct 335 TTGCTTGAGTAGGTATCATAAAAATTTCTTGTACCGCAAGCCTTCGCCATACAAGCCTTC 394
Query 288 TGAATATCTAGTCTCTAAGCTCAGAAGCTATGAGATGCTTCACAAACGTTGTGGTCCAGA 347
|||||||| ||||||||||| ||||||||||||||| ||||||||||||| |||||||
Sbjct 395 CGAATATCTCGTCTCTAAGCTTAGAAGCTATGAGATGATTCACAAACGTTGCGGTCCAGG 454
Query 348 TACAGAAT-ATTACAAAG-AAGCAATAGAGAAACTTAGTC--G-T--G----ATGATGCA 396
||| ||| |||| ||| |||||| | || | ||||||| | | | || |||||
Sbjct 455 GACA-AATGCTTAC-AAGAAAGCAACAAAGCATCTTAGTCATGATGAGAATTATAATGCA 512
Query 397 AGCGA-ATCAAATGGTGAATGCAGATACATTGTATGGGTGGCAGG-TTACGGGCTTGGAA 454
||| | |||| ||||||||||| |||| |||| ||| | || || ||||||||||||||
Sbjct 513 AGC-AGATCAGATGGTGAATGCCGATATGTTGTGTGGCTCGC-GGATTACGGGCTTGGAA 570
Query 455 ACAGATTACTTACTCTTGCTTCTGTTTTCCTCTACGCTCTCTTGACCGAGAGAATCATTC 514
|| || |||| |||||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct 571 ACCGACTACTCACTCTTGCTTCTGTGTTCCTCTACGCTCTCTTGACTGATAGAATCATTC 630
Query 515 TTGTCGACAACCGCAAGGATGTTAGTGATCTCTTATGCGAGCCATTTCCAGGTACTTCAT 574
|||| |||||||| |||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 631 TTGTTGACAACCGGAAGGATATTGGTGATCTCTTATGCGAGCCATTTCCAGGTACTTCAT 690
Query 575 GGTTGCTTCCGCTTGACTTTCCAATGCTGAATTATACTTATGCTTGGGGCTACAATAAGG 634
|||||||||| |||||||||||| || |||| |||||||| | || ||||| ||||
Sbjct 691 GGTTGCTTCCTCTTGACTTTCCATTGATGAAATATACTTA----T--GGATACAACAAGG 744
Query 635 AATATCCTCGTTGTTACGGAACAATGTCTGAAAAACATTCCATCAACTCGACTTCAATCC 694
|||| ||||||||||| ||||||||| ||||| |||||||||||||||||||||||||
Sbjct 745 AATACCCTCGTTGTTATGGAACAATGGAGGAAAATCATTCCATCAACTCGACTTCAATCC 804
Query 695 CGCCGCATCTATA-CATGCATAACCTTCATGATTCAAGGGATAGTGATAAGCTGTT-TGT 752
| || |||||||| | | |||||||| |||||||||||||||||||||||| |||| | |
Sbjct 805 CACCTCATCTATATC-TACATAACCTCCATGATTCAAGGGATAGTGATAAGATGTTCT-T 862
Query 753 ATGCCAAAAGGATCAAAGTTTGATTGACAAAGTCCCATGGTTGATTGTTCA-AGCCAATG 811
||||||||||||||||||||||||||||||||||| ||||||||| || | ||||||||
Sbjct 863 CTGCCAAAAGGATCAAAGTTTGATTGACAAAGTCCCTTGGTTGATT-TTTAGAGCCAATG 921
Query 812 TTTACTTTGTTCCATCGTTATGGTTTAATCCAACTTTCCAAACCGAACTAGTTAAGCTGT 871
|||||||||||||||| ||||||||||||||||| |||||| |||||||| ||||||||
Sbjct 922 TTTACTTTGTTCCATCTTTATGGTTTAATCCAACATTCCAAGCCGAACTAACTAAGCTGT 981
Query 872 TCCCGCAGAAAGAAACCGTCTTTCACCACTTGGCTCGGTATCTTTTTCACCCTACAAATG 931
| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 982 TTCCGCAGAAAGAAACCGTCTTTCACCACTTGGCTCGGTATCTTTTTCACCCCAAAAATC 1041
Query 932 AAGTTTGGGATATGGTCACTGACTACTACCACGCTCATTTGTCGAAAGCCGACGAGAGAC 991
||||||||||||| |||||| | ||||| || | ||| || || ||||| || |||||||
Sbjct 1042 AAGTTTGGGATATCGTCACTAAGTACTATCATGATCACTTATCCAAAGCAGAGGAGAGAC 1101
Query 992 TCGGGATTCAAATAAGGGT-TTTCGGCAAACCTGATGGACGTTTCAAACATGTCATTGAC 1050
||||||||||||| | || ||||| | | | | |||| | | |||| ||||| |||
Sbjct 1102 TCGGGATTCAAATTCGAGTCTTTCG-CGATCAAGGTGGATACTACCAACACGTCATGGAC 1160
Query 1051 CAGGTCATATCATGTACACAAAGAGAGAAACTGTTACCTGAATT-TGCTACACCAGAGGA 1109
|| ||||||||||| ||||||||||||||||| || |||||||| | |||||| ||| ||
Sbjct 1161 CAAGTCATATCATGCACACAAAGAGAGAAACTTTTGCCTGAATTGT-CTACACAAGAAGA 1219
Query 1110 ATCAAAAGTCAATATATCAAAAACCCCGAAACTCAAATCTGTTCTTGTCGCATCTCTCTA 1169
|||||||||||| ||||| || || || ||||| ||| ||||||||||| | ||| | |
Sbjct 1220 ATCAAAAGTCAACATATCGAACACACCAAAACTTAAAGCTGTTCTTGTCACTTCTTTGTC 1279
Query 1170 TCCAGAGTTCTCTGGCAA-CTTA-ACTAACATGTTTTCAAAGCGACCAAGTTCAACAGGA 1227
||| |||| |||| || || | | |||||||||||| ||||| ||| || ||||||
Sbjct 1280 TCCTGAGTACTCTAAAAAACT-AGAG-AACATGTTTTCAGAGCGATCAAATTTGACAGGA 1337
Query 1228 GAAATTGTTGAAGTTTATCAACCAAGTGGAGAGAGAGT-TCAGCAAACAGACAAGAA--A 1284
|| ||| ||||||||||||| ||||||||||| || || ||| |||||||||||||| |
Sbjct 1338 GAGATTATTGAAGTTTATCAGCCAAGTGGAGAAAG-GTATCAACAAACAGACAAGAAGCA 1396
Query 1285 AGTCACGACCAAAAGGCGCTTGCTGAGATGTATCTTTTGAGCTTAACCGATAACATTGTC 1344
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1397 A--CACGACCAAAAGGCGCTTGCTGAGATGTATCTTTTGAGCTTAACCGATAACATTGTT 1454
Query 1345 ACGAGCGCAAGGTCTACATTTGGATATGTTTCATATAGTCTTGGAGGATTAAAGCCATGG 1404
|| ||| ||||||||||||||||||||||| | ||||||||||||| |||||||||||||
Sbjct 1455 ACAAGCTCAAGGTCTACATTTGGATATGTTGCTTATAGTCTTGGAGCATTAAAGCCATGG 1514
Query 1405 TTACTTTATCAGCCAACAA-ATTTCACCA-CTCCTAATCCGCCATGTGTTCGATCTAAGT 1462
|||||||||| ||||| | || ||| | ||||| ||||||| ||||||||||| | ||
Sbjct 1515 TTACTTTATCTGCCAA-ATGATCTCAA-AGCTCCTGATCCGCCGTGTGTTCGATCCACGT 1572
Query 1463 CGATGGAGCCATGTTACCTAACTCCTCCGTCTCATGGATGTGAAGCTGACTGGGGAACT- 1521
|||||||||| |||| ||| ||||||||| ||||||||||||| || |||||||||||
Sbjct 1573 CGATGGAGCCTTGTTTCCTTACTCCTCCGACTCATGGATGTGATGCCGACTGGGGAACGG 1632
Query 1522 AACTCGGGGAA-GATTCTTCCTTTTGTTAGGCATTGTGAGGATCTTATATATGGGGGGCT 1580
|| |||||||| | || |||||||||||||| ||||||||||| |||| ||||| ||
Sbjct 1633 AA-TCGGGGAAAG-TTGTTCCTTTTGTTAGGTATTGTGAGGAT---ATAT--GGGGG-CT 1684
Query 1581 TAAGCTATATGATGAATTTTAG 1602
||||||| |||||||||| |||
Sbjct 1685 TAAGCTACATGATGAATTATAG 1706
> Ahg312409 jgi|Araly1|312409|fgenesh1_pm.C_scaffold_1001189
Length=3378
Score = 1177 bits (637), Expect = 0.0
Identities = 1252/1540 (81%), Gaps = 77/1540 (5%)
Strand=Plus/Plus
Query 103 TCATACTCAAACAACTTTAACAACAAACTTCTTGATG---CTACAACCAAAGTAGACATA 159
|||| ||| ||| |||| |||||| ||||||||| || |||||||||| || | |
Sbjct 1876 TCATTCTCTAACGACTTCAACAACCAACTTCTTGTTGCTACTACAACCAACGT-TTC--A 1932
Query 160 AAGGAAACCGAAAAACCG-GTGGATAAACTTATAGGAGGGCTTTTAACTGCGGATTTTGA 218
|| |||||||||| |||| | ||||||||| || ||||||||| |||| |||||||| ||
Sbjct 1933 AACGAAACCGAAACACCGAG-GGATAAACTGATCGGAGGGCTTCTAACCGCGGATTTCGA 1991
Query 219 TGAAGGTTCTTGCTTGAGTAGGTATCATAAATATTTCTTGTACCGCAAGCCATCCCCGTA 278
||||||||||||||||||||||||||| ||| ||| ||||| |||||| | || |||||
Sbjct 1992 TGAAGGTTCTTGCTTGAGTAGGTATCAGCAATCTTTGTTGTATCGCAAGGCTTCACCGTA 2051
Query 279 CAAGCCTTCTGAATATCTAGTCTCTAAGCTCAGAAGCTATGAGATGCTTCACAAACGTTG 338
||||||||||||||| || ||||||||||| ||||||||||||| ||||||||| |||||
Sbjct 2052 CAAGCCTTCTGAATACCTTGTCTCTAAGCTTAGAAGCTATGAGAAGCTTCACAAGCGTTG 2111
Query 339 TGGTCCAGATACAGAAT-ATTACAAAG-AAGCAATAGAGAAACTTAGTC--G-TGAT--G 391
||||||| || | || |||| ||| |||||| ||||| ||| ||| | |||| |
Sbjct 2112 CGGTCCAGGCAC-GGATGCTTAC-AAGAAAGCAACAGAGATTCTTGGTCATGATGATGAG 2169
Query 392 -A---TGCAAGCGAATCAAATGGTGAATGCAGATACATTGTATGGGTGGCAGG-TTACGG 446
| ||||||| |||| ||||||||||||||||||||| ||||| || || ||||||
Sbjct 2170 AATTTTGCAAGCAAATCTGTTGGTGAATGCAGATACATTGTGTGGGTTGC-GGTTTACGG 2228
Query 447 GCTTGGAAACAGATTACTTACTCTTGCTTCTGTTTTCCTCTACGCTCTCTTGACCGAGAG 506
||| ||||||||| | ||||||||| | ||||| |||||||||||||||||||| |||||
Sbjct 2229 GCTAGGAAACAGAATCCTTACTCTTTCCTCTGTCTTCCTCTACGCTCTCTTGACAGAGAG 2288
Query 507 AATCATTCTTGTCGA-CAACCGCAAGGATGTTAGTGATCTCTTATGCGAGCCATTTCCAG 565
| || ||||||| || ||| | || ||| | ||||||||||| |||||||| |||||||
Sbjct 2289 AGTCGTTCTTGTTGATCAA-AGTAAAGATATAAGTGATCTCTTCTGCGAGCCGTTTCCAG 2347
Query 566 GTACTTCATGGTTGCTTCCGCTTGACTTTCCAATGCTGAATTATACTTATGCTTG-GGGC 624
||||||||||||| ||||| ||||| |||| || || || | || | | ||| ||
Sbjct 2348 GTACTTCATGGTTACTTCCTCTTGA-ATTCCCAT--TG-ATGAAAC--A-GATTGATGGA 2400
Query 625 TACAATAAGGAATATC-CTCGTTGTTACGGAACAATGTCTGAA-AAACATTCCATCAACT 682
||||| ||| ||| | ||||||||||||||||||||| |||| || || |||||||||
Sbjct 2401 TACAACCAGGGATA-CTCTCGTTGTTACGGAACAATGT-TGAACAATCAAGCCATCAACT 2458
Query 683 CGACTTCAATCCCGCCGCATCTATA-CATGCATAACCTTCATGATTCAAGGGATAGTGAT 741
| |||| |||||| |||||||| || | | |||| ||||||||||||||||||| ||||
Sbjct 2459 CCACTTTAATCCCTCCGCATCTCTATC-TTCATATTCTTCATGATTCAAGGGATAATGAT 2517
Query 742 AAGCTGTT-TGTATGCCAAAAGGATCAAAGT-TTGA-TTGACAAAGTCCCATGGTTGATT 798
||| |||| | | ||||||||||||| ||| || | | ||||||||||| |||||||||
Sbjct 2518 AAGATGTTCT-TCTGCCAAAAGGATC--AGTCTTTAGTCGACAAAGTCCCTTGGTTGATT 2574
Query 799 GTTC-AAGCCAATGTTTACTTTGTTCCATCGT-TATGGTTTAATCCAACTTTCCAAACCG 856
| || |||||||||| |||||||||||||| | ||||||| |||||||||||||||||||
Sbjct 2575 G-TCAAAGCCAATGTCTACTTTGTTCCATC-TCTATGGTTGAATCCAACTTTCCAAACCG 2632
Query 857 AACTAGTTAAGCTGTTCCCGCAGAAAGAAACCGTCTTTCACCA-CTTGGCTCGGTATCTT 915
||||| | ||||| ||||||||||||||| | ||||||||||| ||| |||||| |||||
Sbjct 2633 AACTAATGAAGCTATTCCCGCAGAAAGAAGCTGTCTTTCACCATCTT-GCTCGGCATCTT 2691
Query 916 TTTCACCCTACAAATGAAGTTT-GGGATATGGTCAC-TGACTACTACCACG-CTCATTTG 972
||||| || || ||| |||||| ||||| || |||| || | |||| | | || | ||
Sbjct 2692 TTTCATCCGACGAATCAAGTTTGGGGAT-TGATCACAAGA-TCCTACAATGCCT-ACTTA 2748
Query 973 TCGAA-AGCCGACGAGA-GACTCGGGATTCAAATAAGGGTTTTCGGCAAACCTGATGGA- 1029
|| || ||| ||||||| | || || ||||| ||| || | ||| |||| | | ||||
Sbjct 2749 TC-AAGAGCAGACGAGACG-CTTGGTATTCAGATACGGATATTCAGCAATCGAGCTGGAT 2806
Query 1030 CGTTTCAAACATGTCATTGACCAGGTCATATCATGTACACAAAGAGAGAAACTGTTACCT 1089
|||| | ||||| || || |||||| || | || |||| ||||||||| || || |||
Sbjct 2807 ATTTTC-AGCATGTAATGGATCAGGTCGTAGCTTGCACACGAAGAGAGAACCTTTTGCCT 2865
Query 1090 GAATTTGCTACACCAGAGGAATCAAAAGTCAATATATCAAAAACCCCGAAACTCAAATCT 1149
||| ||| ||| ||| |||||||||||||||||||||| || || ||| || ||| ||
Sbjct 2866 GAACCAGCTGCACAAGAAGAATCAAAAGTCAATATATCAAGAAGCCAGAAGCTTAAAGCT 2925
Query 1150 GTTCTTGTCGCATCTCTCTATCCAGAGTTCTCTGGCAA-CTTAACTAACATGT-TTTCAA 1207
||||||||| ||||| | |||||||||| |||| | || ||||| ||||||| || |
Sbjct 2926 GTTCTTGTCACATCTTTGTATCCAGAGTACTCT-GAAACCTTAAAGAACATGTATTGGGA 2984
Query 1208 AGCGACCAAGTTCAACAGGAGAAATTGTTGAAGTTTATCAACCAAGTGGAGAGAGAGTTC 1267
| ||||| || |||||||| || || |||||||||| || ||||||||||| || ||||
Sbjct 2985 A-CGACCGAGCTCAACAGGGGAGATCATTGAAGTTTACCAGCCAAGTGGAGAAAGGGTTC 3043
Query 1268 AGCAAACAGACAAGAAAAGTCACGACCAAAAGGCGCTTGCTGAGATGTATCTTTTGAGCT 1327
| |||||||||||||| ||||||||||||||| || || |||||||||||| | || |
Sbjct 3044 AACAAACAGACAAGAAGCTTCACGACCAAAAGGCACTCGCCGAGATGTATCTTCTAAG-T 3102
Query 1328 -TAACCGATAACATTGTCACGAGCGCAAGGTCTACATTTGGATATGTTTCAT-ATAGTCT 1385
|||| |||||||||||||| ||||||||||||||||||||||||||| | | |||||||
Sbjct 3103 CTAACTGATAACATTGTCACAAGCGCAAGGTCTACATTTGGATATGTTGC-TCATAGTCT 3161
Query 1386 TGGAGGATTAAAGCCATGGTTACTTTATCAGCCAACAAATT-TCACCA-CTCCTAATCCG 1443
|||||||||||||||||||||||| |||||||||||| | | || | ||||| ||||
Sbjct 3162 TGGAGGATTAAAGCCATGGTTACTCTATCAGCCAACAGGTCCT-AC-AGCTCCTGATCCA 3219
Query 1444 CCATGTGTTCGATCTAAGTCGATGGAGCCATGTTACCTAACTCCTCCGTCTCATGGATGT 1503
|| ||| ||||||| | ||| ||||| || ||| |||| |||||||||||||||||||||
Sbjct 3220 CCGTGTATTCGATCCACGTCAATGGACCCTTGTCACCTTACTCCTCCGTCTCATGGATGT 3279
Query 1504 GAAGCTGACTGGGGAACTAACTCGGGGAAGATTCTTCCTTTTGTTAGGCATTGTGAGGAT 1563
||| | || ||||||||| |||| |||||| | |||||||||| |||||||||||||||
Sbjct 3280 GAACCCGAATGGGGAACTGACTCCGGGAAGGTAGTTCCTTTTGTAAGGCATTGTGAGGAT 3339
Query 1564 CTTAT-ATATGGGGGGCTTAAGCTATATGATGAATTTTAG 1602
| | | | | ||||||||||||| |||||| || |||
Sbjct 3340 CGTGGGA-ACGATGGGCTTAAGCTATTTGATGAGTTATAG 3378
Score = 771 bits (417), Expect = 0.0
Identities = 1084/1393 (78%), Gaps = 98/1393 (7%)
Strand=Plus/Plus
Query 171 AAAACCG-GTGGATAAACT-TATAGGAGGGCTTTTAACTGCGGATTTTGATGAAGGTTCT 228
||||||| | ||||||||| | | ||||| |||||||| || ||||| ||||||| ||||
Sbjct 174 AAAACCGAG-GGATAAACTGT-TTGGAGGTCTTTTAACCGCTGATTTCGATGAAGATTCT 231
Query 229 TGCTTGAGTAGGTATCATAAATATTTCTTGTACCGCAAGCCATCCCCGTACAAG-CCTTC 287
|||||||||||||||| | | || |||||| |||||||| || || ||| || ||||
Sbjct 232 TGCTTGAGTAGGTATC---AGTCTTCCTTGTATCGCAAGCCTTCGCCTTAC-AGAACTTC 287
Query 288 TGAATATCTAGTCTCTAAGCTCAGAAG-CTATGAGATGCTTCACAAACGTTGTGGTCCAG 346
||||||||||||||||||||| || || ||||||| | |||||||| ||||| |||||||
Sbjct 288 TGAATATCTAGTCTCTAAGCTTAG-AGACTATGAGCTACTTCACAAGCGTTGCGGTCCAG 346
Query 347 ATACAGAAT-ATTACAAAG-AAGCAATAGAGAAACTTAGTCGTGATGATG-CAA-----G 398
|| | || |||| ||| |||||| |||||| ||| ||| |||| ||| || |
Sbjct 347 GCACTG-ATGCTTAC-AAGAAAGCAACAGAGAAGCTTGGTCATGATCATGAGAATGTTGG 404
Query 399 CGA-A--TCAAATGGTGAATGCAGATACATTGTATGGGTGGCAGGTTACGGGCTTGGAAA 455
|| | || ||||||||||| ||||||||| |||||||| | ||| |||||||||||
Sbjct 405 AGATAGCTCTGCTGGTGAATGCAAATACATTGTGTGGGTGGCTGTTTATGGGCTTGGAAA 464
Query 456 CAGATTACTTACTCTTGCTTCTGTTTTCCTCTACGCTCTCTTGACCGAGAGAATCATTCT 515
|||| |||| |||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct 465 CAGAATACTCACTCTTGCTTCTGTGTTCCTCTATGCTCTCTTGACAGAGAGAATCATTCT 524
Query 516 TGTCGA-CAACCGCAAGGATGTTAGTGATCTCTTATGCGAGCCATTTCCAGGTACTTCAT 574
||| || ||| ||||||||| ||||||||||||| || ||||| ||||| |||||||| |
Sbjct 525 TGTGGACCAA-CGCAAGGATATTAGTGATCTCTTCTGTGAGCCTTTTCCGGGTACTTCCT 583
Query 575 GGTTGCTTCCGCTTGACTTTCCAATGCTGAATTATACTTATGCTTGGGGCTACAATAAGG 634
|||| ||||| ||||| |||||| || || | | | || | | | | ||| ||
Sbjct 584 GGTTACTTCCTCTTGATTTTCCATTGATGGGTCAGA--TA-G-AT--AGTTTCAACCGGG 637
Query 635 AATATCCTCG--TTGTTACGGAACAATGTCTGAA-AAACATTCCATCAACTCGACTTCAA 691
|||| |||| ||||||||||||||||| |||| || ||| |||| ||||||||| |||
Sbjct 638 AATA--CTCGCATTGTTACGGAACAATGT-TGAAGAATCATACCATTAACTCGACTACAA 694
Query 692 TCCCGCCGCATCTATA-CATGCATAACCTTCATGATTCA-AGGGAT-AGTGATAAGCTGT 748
|||| | ||||| || | | ||| || ||||||| | || ||| || || ||| |||
Sbjct 695 TCCCATCACATCTTTATC-TTCATCTTCTCCATGATT-ACAGAGATCAG-GACAAGATGT 751
Query 749 T-TGTATGCCAAAAGGATCAAAGTTTGATTGACAAAGTCCCATGGTTGATTGTTC-AAGC 806
| | | ||||| ||||||||| ||| || ||||||||||| ||| || ||| || || |
Sbjct 752 TCT-TCTGCCATAAGGATCAATCTTTAATCGACAAAGTCCCTTGGCTGGTTG-TCAAATC 809
Query 807 CAATGTTTACTTTGTTCCATCGT-TATGGTTTAATCCAACTTTCCAAACCGAACT-AGTT 864
||| |||||||| ||||||| | ||||| | ||||| | ||||||| ||||||| | |
Sbjct 810 CAACCTTTACTTTATTCCATC-TCTATGGCTGAATCCTAGTTTCCAACCCGAACTCA-TC 867
Query 865 AAGCTGTTCCCGCAGAAAGAAACCGTCTTTC-ACCACTTGGCTCGGTATCTTTTTCACCC 923
||||| |||||||||||||| |||||| ||| ||||| |||| || ||||||||||||||
Sbjct 868 AAGCTATTCCCGCAGAAAGACACCGTC-TTCTACCACCTGGCACGCTATCTTTTTCACCC 926
Query 924 TACAAATGAAGTTTGGGATATGGTCA-CTGACTACTACCACGC-TCATTTGTCGAA-AGC 980
||||| |||| |||| |||||||| | || | |||| | || | | || || || |||
Sbjct 927 GACAAACCAAGTCTGGGGTATGGTCACCAGA-TCCTACAATGCAT-ACTTATC-AAGAGC 983
Query 981 CGACGAGAGACTCGGGATTCAAATAAGGGTTTTCGGCAAACCTGA-TGGACGTTTCAAAC 1039
||||||| |||||||||||||||| |||||||| ||| | | | | | |||| | |
Sbjct 984 AGACGAGATACTCGGGATTCAAATACGGGTTTTCAGCAGA-CAAACTAAATATTTCCAGC 1042
Query 1040 ATGTCATTG-ACCAGGTCATATCATGTACACAAAGAGAGAAACTGTTACCTGAATTTGCT 1098
| || | || ||||| || || | |||||||||||||||||||||||||||||| |||
Sbjct 1043 ACGT-AATGAACCAGATCGTAGCCTGTACACAAAGAGAGAAACTGTTACCTGAAGCAGCT 1101
Query 1099 ACACCAG-AGGAATCAAAAGTCAATA-TA--TCAAAAAC-CCCGAAACTCAAATCTGTTC 1153
|| | || || ||||| |||||| || || ||||| | ||| ||||| ||| |||| |
Sbjct 1102 ACGCAAGGAG-AATCACAAGTCACTAATACATCAAATCCTCCC-AAACTTAAAGCTGTCC 1159
Query 1154 TTGTCGCATCTCTCTATCCAGAGTTCTCTGGCAACTTAACTAACATGTTTTCA-AAGCGA 1212
| ||| ||||||| ||||||| | |||| ||| ||| ||||||| || || ||
Sbjct 1160 TGGTCACATCTCTGAATCCAGAATACTCTAATAACCTAAAGAACATGTATTGGGAA-CGC 1218
Query 1213 CCAAGTTCAACAGGAGAAATTGTTGAAGTTTATCAACCAAGT-GGAGA----GAGA--G- 1264
|||| | |||||||||| || || |||||||||| |||||| ||| | |||| |
Sbjct 1219 CCAACTACAACAGGAGACATAGTAAAAGTTTATCAGCCAAGTAGGAAAAAACGAGAAAGG 1278
Query 1265 TT-CAGCAAACAGACAAGAAAAGTCACGACCAAAAGGCGCTTGCTGAGATGTATCTTTTG 1323
|| ||||||||||||||||| ||||||||||||||| || || |||||||| || |
Sbjct 1279 TTTCAGCAAACAGACAAGAAGCTTCACGACCAAAAGGCACTCGCAGAGATGTACCTCCTA 1338
Query 1324 AGCTTAACCGAT-AACATTGTCACGAGCGCAAGGTCTACATTTGGATATGTTTCAT-ATA 1381
||| |||| ||| ||| | |||| ||| | ||| |||||||||||||| | | | |
Sbjct 1339 AGCCTAACTGATCAAC-TAATCACAAGCTCTTCGTCAACATTTGGATATGTAGC-TCA-A 1395
Query 1382 G-TCTTGGAGGATTAAAGCCATGGTTACTTTAT-CAGCCAACA-AATTTCACCACTCCTA 1438
| ||||||||| |||||||||||| |||| || || |||| | || |||| |||||||
Sbjct 1396 GGTCTTGGAGGGTTAAAGCCATGGATACTCTACACA-CCAA-AGAAGTTCAAAACTCCTA 1453
Query 1439 ATCCGCCATGTGTTCGA--TCTAAGTCGATGGAGCCATGTTACCTAACTCCTCC-GTCTC 1495
|||| ||||||| ||| | || || |||||||| |||| |||||| ||||| | |||
Sbjct 1454 ATCCACCATGTGGTCGCGGTGTA--TCCATGGAGCCTTGTTTCCTAACCCCTCCAG-CTC 1510
Query 1496 ATGGATGTGAAGC 1508
|||||| |||||
Sbjct 1511 GTGGATGCGAAGC 1523
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 60030226120
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5