BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G15370.1 Length=1602 Score E Sequences producing significant alignments: (Bits) Value Ahg906274 jgi|Araly1|906274|Al_scaffold_0003_3402 2185 0.0 Ahg480406 jgi|Araly1|480406|fgenesh2_kg.3__3107__AT2G15390.2 1530 0.0 Ahg312409 jgi|Araly1|312409|fgenesh1_pm.C_scaffold_1001189 1177 0.0 > Ahg906274 jgi|Araly1|906274|Al_scaffold_0003_3402 Length=1605 Score = 2185 bits (1183), Expect = 0.0 Identities = 1475/1615 (91%), Gaps = 23/1615 (1%) Strand=Plus/Plus Query 1 ATGTATCAAAAATTTCAGATCT-CCGGCAAAA-TTGTTAAGACTTTGGGGCTAAAGATGA 58 |||||||| | ||||||||| | || | |||| || | ||| | |||||| | |||| || Sbjct 1 ATGTATCACATATTTCAGATTTACC-GAAAAAGTT-TCAAGGCATTGGGGTTGAAGAAGA 58 Query 59 AAGTTCTGATAGCAGTC-TCCTTTGGTTCCTTACTATTTATACTATCATACTCAAACAAC 117 || |||||||||||||| | |||||||| |||| || |||||||||||| |||||||||| Sbjct 59 AAATTCTGATAGCAGTCGT-CTTTGGTTGCTTAGTAATTATACTATCATTCTCAAACAAC 117 Query 118 TTTAACAA-CAAACTTCTTGATGCTACAACCAAAGTAGACATA-AAGGAAACCGAAAAAC 175 || ||||| |||| ||||| ||| ||||||| || ||| ||| || ||| |||||| || Sbjct 118 TTCAACAACCAAA-TTCTTAATGATACAACC-AA--AGATATAGAA-GAATCCGAAAGAC 172 Query 176 CGGTGGATAAACTTATAGGAGGGCTTTTAACTGCGGATTTTGATGAAGGTTCTTGCTTGA 235 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 173 CGGTGGATAAACTTATAGGAGGGCTTTTAACTGCGGATTTCGATGAAGGATCTTGCTTGA 232 Query 236 GTAGGTATCATAAATA-TTTCTTGTACCGCAAGCCATCCCCGTACAAGCCTTCTGAATAT 294 |||||||||||||| | |||||||||||||||||| ||||| || ||||||||||||||| Sbjct 233 GTAGGTATCATAAA-ACTTTCTTGTACCGCAAGCCTTCCCCATATAAGCCTTCTGAATAT 291 Query 295 CTAGTCTCTAAGCTCAGAAGCTATGAGATGCTTCACAAACGTTGTGGTCCAGATACAGAA 354 || ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| || Sbjct 292 CTCGTCTCTAAGCTTAGAAGCTATGAGATGCTTCACAAACGTTGCGGTCCAGATACAAAA 351 Query 355 TATTACAAAGAAGCAATAGAGAAACTTAGTCGTGATGA-T-----GCAAGCGAATCAAAT 408 |||||||||||||| ||||||||||||||| ||||| | ||||||||| ||||| Sbjct 352 GCTTACAAAGAAGCAACAGAGAAACTTAGTCGCGATGAGTATTATGCAAGCGAAGCAAAT 411 Query 409 GGTGAATGCAGATACATTGTATGGGTGGCAGGTTACGGGCTTGGAAACAGATTACTTACT 468 |||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct 412 GGTGAATGTAGATACATTGTGTGGGTCGCAGGTTACGGGCTTGGAAATAGATTACTTACT 471 Query 469 CTTGCTTCTGTTTTCCTCTACGCTCTCTTGACCGAGAGAATCATTCTTGTCGACAACCGC 528 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 472 CTTGCTTCTGTGTTCCTCTACGCTCTCTTGACCGAGAGAATCATTCTTGTTGACAACCGC 531 Query 529 AAGGATGTTAGTGATCTCTTATGCGAGCCATTTCCAGGTACTTCATGGTTGCTTCCGCTT 588 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 532 AAGGATGTTAGTGATCTCTTATGCGAGCCATTCCCAGGTACTTCATGGTTGCTTCCTCTT 591 Query 589 GACTTTCCAATGCTGAATTATACTTATGCTTGGGGCTACAATAAGGAATATCCTCGTTGT 648 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 592 GACTTTCCAATGTTGAATTATACTTATGCTTGGGGCTACAATAAGGAATACCCTCGTTGT 651 Query 649 TACGGAACAATGTCTGAAAAACATTCCATCAACTCGACTTCAATCCCGCCGCATCTATAC 708 || ||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 652 TATGGAACAATGGAGGAAAATCATTCCATCAACTCGACTTCAATCCCGCCCCATCTATAC 711 Query 709 ATGCATAACCTTCATGATTCAAGGGATAGTGATAAGCTGTTTGTATGCCAAAAGGATCAA 768 ||||||||||| |||||||||||||||||||||||| |||| | ||||||||||||||| Sbjct 712 ATGCATAACCTCCATGATTCAAGGGATAGTGATAAGTTGTTCATCTGCCAAAAGGATCAA 771 Query 769 AGTTTGATTGACAAAGTCCCATGGTTGATTGTTCAAGCCAATGTTTACTTTGTTCCATCG 828 |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 772 AGTTTGATCGACAAAGTCCCTTGGTTGATTGTTCAAGCCAATGTTTACTTTGTTCCATCT 831 Query 829 TTATGGTTTAATCCAACTTTCCAAACCGAACTAGTTAAGCTGTTCCCGCAGAAAGAAACC 888 |||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 832 TTATGGTTCAATCCAAATTTCCAAACCGAACTAGTTAAGCTGTTTCCGCAGAAAGACACC 891 Query 889 GTCTTTCACCACTTGGCTCGGTATCTTTTTCACCCTACAAATGAAGTTTGGGATATGGTC 948 ||||||||||| |||||||||||||||||||| || |||||| ||||||||||||||||| Sbjct 892 GTCTTTCACCATTTGGCTCGGTATCTTTTTCATCCGACAAATCAAGTTTGGGATATGGTC 951 Query 949 ACTGACTACTACCACGCTCATTTGTCGAAAGCCGACGAGAGACTCGGGATTCAAATAAGG 1008 ||| | |||||| | |||||||| || ||||| ||||||||||| |||||||||||| || Sbjct 952 ACTAAGTACTACGATGCTCATTTATCCAAAGCAGACGAGAGACTTGGGATTCAAATACGG 1011 Query 1009 GTTTTCGGCAAACCTGATGGACGTTTCAAACATGTCATTGACCAGGTCATATCATGTACA 1068 ||||| ||||||||| |||| |||| |||||||||| ||||| ||| || |||||||| Sbjct 1012 GTTTTTGGCAAACCTTCTGGATTTTTCCAACATGTCATGGACCAAGTCGTAGCATGTACA 1071 Query 1069 CAAAGAGAGAAACTGTTACCTGAATTTGCTACACCAGAGGAATCAAAAGTCAATATATCA 1128 ||||| ||||||||||| |||||||||||||||| ||| |||| ||||||||| ||||| Sbjct 1072 CAAAGGGAGAAACTGTTGCCTGAATTTGCTACACAAGAAGAATTAAAAGTCAACATATCG 1131 Query 1129 AAAACCCCGAAACTCAAATCTGTTCTTGTCGCATCTCTCTATCCAGAGTTCTCTGGCAAC 1188 |||||||||||||| ||| |||||||||| ||||||||||||||||||| |||||||||| Sbjct 1132 AAAACCCCGAAACTTAAAGCTGTTCTTGTGGCATCTCTCTATCCAGAGTACTCTGGCAAC 1191 Query 1189 TTAACTAACATGTTTTCAAAGCGACCAAGTTCAACAGGAGAAATTGTTGAAGTTTATCAA 1248 ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1192 TTAACGAACATGTTTTCGAAGCGACCAAGTTCAACAGGAGAAATTGTTGAAGTTTATCAG 1251 Query 1249 CCAAGTGGAGAGAGAGTTCAGCAAACAGACAAGAAAAGT-CACGACCAAAAGGCGCTTGC 1307 ||||||||||| ||||||||||||||||||||||| | | || ||||||||||||||||| Sbjct 1252 CCAAGTGGAGAAAGAGTTCAGCAAACAGACAAGAAGA-TACATGACCAAAAGGCGCTTGC 1310 Query 1308 TGAGATGTATCTTTTGAGCTTAACCGATAACATTGTCACGAGCGCAAGGTCTACATTTGG 1367 ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1311 TGAAATGTATCTTTTGAGCTTAACCGATAACATTGTCACAAGCGCAAGGTCTACATTTGG 1370 Query 1368 ATATGTTTCATATAGTCTTGGAGGATTAAAGCCATGGTTACTTTATCAGCCAACAAATTT 1427 ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 1371 ATATGTTTCTTATAGTCTTGGAGGACTAAGGCCATGGTTACTTTATCAGCCAACAAATTT 1430 Query 1428 CACCACTCCTAATCCGCCATGTGTTCGATCTAAGTCGATGGAGCCATGTTACCTAACTCC 1487 ||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct 1431 CACAACTCCTAATCCGCCGTGTGTTCGATCCAAGTCGATGGAGCCATGTTACCTTACTCC 1490 Query 1488 TCCGTCTCATGGATGTGAAGCTGACTGGGGAACTAACTCGGGGAAGATTCTTCCTTTTGT 1547 |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 1491 TCCGTCTCATGGATGTGAAGCTGACTCGGGAAAAAACTCGGGGAAGATTCTTCCTTTTGT 1550 Query 1548 TAGGCATTGTGAGGATCTTATATATGGGGGGCTTAAGCTATATGATGAATTTTAG 1602 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 1551 TAGGCATTGTGAGGATATTATGTATGGGGGGCTTAAGCTATATGATGAATTTTAG 1605 > Ahg480406 jgi|Araly1|480406|fgenesh2_kg.3__3107__AT2G15390.2 Length=1783 Score = 1530 bits (828), Expect = 0.0 Identities = 1384/1642 (84%), Gaps = 80/1642 (5%) Strand=Plus/Plus Query 1 ATGTATCAAAAATTTCAGATCTCCGGCAAAATTGTTAAGACTTTGGGGCTAAAGATGAAA 60 |||||||| | |||||||||||||||| || || | ||| |||||||| | |||| |||| Sbjct 105 ATGTATCATATATTTCAGATCTCCGGCGAAGTTATCAAGGCTTTGGGGTTGAAGACGAAA 164 Query 61 GTTCTGATAGCAGTC-TCCTTTGGTTCCTTACT-A-----T-T-T-A---TACTATCATA 107 |||||||| ||||| | |||| || ||||||| | | | | | || |||| | Sbjct 165 ATTCTGATAACAGTCGT-CTTTAGTACCTTACTAATTTTGTCTGTAATGTTATTATCGTT 223 Query 108 CTCAAACAACTTTAACAACAAACTTCTTGATGCTACAACCAAAGTAGACATAAAGGAAAC 167 |||||||||||| ||||| |||||| ||| |||||||| | || | || ||| | Sbjct 224 CTCAAACAACTTCAACAATAAACTTTTTGCTGCTACAATC-AA--CG--AT----GAATC 274 Query 168 CGAAAAACCGGTGGATAAACTTATAGGAGGGCTTTTAACTGCGGATTTTGATGAAGGTTC 227 ||||| ||||| ||||||||| ||||||||||||||||| |||||||| |||||||| || Sbjct 275 CGAAACACCGGGGGATAAACTGATAGGAGGGCTTTTAACCGCGGATTTCGATGAAGGATC 334 Query 228 TTGCTTGAGTAGGTATCATAAATATTTCTTGTACCGCAAGCCATCCCCGTACAAGCCTTC 287 |||||||||||||||||||||| ||||||||||||||||||| || || ||||||||||| Sbjct 335 TTGCTTGAGTAGGTATCATAAAAATTTCTTGTACCGCAAGCCTTCGCCATACAAGCCTTC 394 Query 288 TGAATATCTAGTCTCTAAGCTCAGAAGCTATGAGATGCTTCACAAACGTTGTGGTCCAGA 347 |||||||| ||||||||||| ||||||||||||||| ||||||||||||| ||||||| Sbjct 395 CGAATATCTCGTCTCTAAGCTTAGAAGCTATGAGATGATTCACAAACGTTGCGGTCCAGG 454 Query 348 TACAGAAT-ATTACAAAG-AAGCAATAGAGAAACTTAGTC--G-T--G----ATGATGCA 396 ||| ||| |||| ||| |||||| | || | ||||||| | | | || ||||| Sbjct 455 GACA-AATGCTTAC-AAGAAAGCAACAAAGCATCTTAGTCATGATGAGAATTATAATGCA 512 Query 397 AGCGA-ATCAAATGGTGAATGCAGATACATTGTATGGGTGGCAGG-TTACGGGCTTGGAA 454 ||| | |||| ||||||||||| |||| |||| ||| | || || |||||||||||||| Sbjct 513 AGC-AGATCAGATGGTGAATGCCGATATGTTGTGTGGCTCGC-GGATTACGGGCTTGGAA 570 Query 455 ACAGATTACTTACTCTTGCTTCTGTTTTCCTCTACGCTCTCTTGACCGAGAGAATCATTC 514 || || |||| |||||||||||||| |||||||||||||||||||| || |||||||||| Sbjct 571 ACCGACTACTCACTCTTGCTTCTGTGTTCCTCTACGCTCTCTTGACTGATAGAATCATTC 630 Query 515 TTGTCGACAACCGCAAGGATGTTAGTGATCTCTTATGCGAGCCATTTCCAGGTACTTCAT 574 |||| |||||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct 631 TTGTTGACAACCGGAAGGATATTGGTGATCTCTTATGCGAGCCATTTCCAGGTACTTCAT 690 Query 575 GGTTGCTTCCGCTTGACTTTCCAATGCTGAATTATACTTATGCTTGGGGCTACAATAAGG 634 |||||||||| |||||||||||| || |||| |||||||| | || ||||| |||| Sbjct 691 GGTTGCTTCCTCTTGACTTTCCATTGATGAAATATACTTA----T--GGATACAACAAGG 744 Query 635 AATATCCTCGTTGTTACGGAACAATGTCTGAAAAACATTCCATCAACTCGACTTCAATCC 694 |||| ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||| Sbjct 745 AATACCCTCGTTGTTATGGAACAATGGAGGAAAATCATTCCATCAACTCGACTTCAATCC 804 Query 695 CGCCGCATCTATA-CATGCATAACCTTCATGATTCAAGGGATAGTGATAAGCTGTT-TGT 752 | || |||||||| | | |||||||| |||||||||||||||||||||||| |||| | | Sbjct 805 CACCTCATCTATATC-TACATAACCTCCATGATTCAAGGGATAGTGATAAGATGTTCT-T 862 Query 753 ATGCCAAAAGGATCAAAGTTTGATTGACAAAGTCCCATGGTTGATTGTTCA-AGCCAATG 811 ||||||||||||||||||||||||||||||||||| ||||||||| || | |||||||| Sbjct 863 CTGCCAAAAGGATCAAAGTTTGATTGACAAAGTCCCTTGGTTGATT-TTTAGAGCCAATG 921 Query 812 TTTACTTTGTTCCATCGTTATGGTTTAATCCAACTTTCCAAACCGAACTAGTTAAGCTGT 871 |||||||||||||||| ||||||||||||||||| |||||| |||||||| |||||||| Sbjct 922 TTTACTTTGTTCCATCTTTATGGTTTAATCCAACATTCCAAGCCGAACTAACTAAGCTGT 981 Query 872 TCCCGCAGAAAGAAACCGTCTTTCACCACTTGGCTCGGTATCTTTTTCACCCTACAAATG 931 | |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 982 TTCCGCAGAAAGAAACCGTCTTTCACCACTTGGCTCGGTATCTTTTTCACCCCAAAAATC 1041 Query 932 AAGTTTGGGATATGGTCACTGACTACTACCACGCTCATTTGTCGAAAGCCGACGAGAGAC 991 ||||||||||||| |||||| | ||||| || | ||| || || ||||| || ||||||| Sbjct 1042 AAGTTTGGGATATCGTCACTAAGTACTATCATGATCACTTATCCAAAGCAGAGGAGAGAC 1101 Query 992 TCGGGATTCAAATAAGGGT-TTTCGGCAAACCTGATGGACGTTTCAAACATGTCATTGAC 1050 ||||||||||||| | || ||||| | | | | |||| | | |||| ||||| ||| Sbjct 1102 TCGGGATTCAAATTCGAGTCTTTCG-CGATCAAGGTGGATACTACCAACACGTCATGGAC 1160 Query 1051 CAGGTCATATCATGTACACAAAGAGAGAAACTGTTACCTGAATT-TGCTACACCAGAGGA 1109 || ||||||||||| ||||||||||||||||| || |||||||| | |||||| ||| || Sbjct 1161 CAAGTCATATCATGCACACAAAGAGAGAAACTTTTGCCTGAATTGT-CTACACAAGAAGA 1219 Query 1110 ATCAAAAGTCAATATATCAAAAACCCCGAAACTCAAATCTGTTCTTGTCGCATCTCTCTA 1169 |||||||||||| ||||| || || || ||||| ||| ||||||||||| | ||| | | Sbjct 1220 ATCAAAAGTCAACATATCGAACACACCAAAACTTAAAGCTGTTCTTGTCACTTCTTTGTC 1279 Query 1170 TCCAGAGTTCTCTGGCAA-CTTA-ACTAACATGTTTTCAAAGCGACCAAGTTCAACAGGA 1227 ||| |||| |||| || || | | |||||||||||| ||||| ||| || |||||| Sbjct 1280 TCCTGAGTACTCTAAAAAACT-AGAG-AACATGTTTTCAGAGCGATCAAATTTGACAGGA 1337 Query 1228 GAAATTGTTGAAGTTTATCAACCAAGTGGAGAGAGAGT-TCAGCAAACAGACAAGAA--A 1284 || ||| ||||||||||||| ||||||||||| || || ||| |||||||||||||| | Sbjct 1338 GAGATTATTGAAGTTTATCAGCCAAGTGGAGAAAG-GTATCAACAAACAGACAAGAAGCA 1396 Query 1285 AGTCACGACCAAAAGGCGCTTGCTGAGATGTATCTTTTGAGCTTAACCGATAACATTGTC 1344 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1397 A--CACGACCAAAAGGCGCTTGCTGAGATGTATCTTTTGAGCTTAACCGATAACATTGTT 1454 Query 1345 ACGAGCGCAAGGTCTACATTTGGATATGTTTCATATAGTCTTGGAGGATTAAAGCCATGG 1404 || ||| ||||||||||||||||||||||| | ||||||||||||| ||||||||||||| Sbjct 1455 ACAAGCTCAAGGTCTACATTTGGATATGTTGCTTATAGTCTTGGAGCATTAAAGCCATGG 1514 Query 1405 TTACTTTATCAGCCAACAA-ATTTCACCA-CTCCTAATCCGCCATGTGTTCGATCTAAGT 1462 |||||||||| ||||| | || ||| | ||||| ||||||| ||||||||||| | || Sbjct 1515 TTACTTTATCTGCCAA-ATGATCTCAA-AGCTCCTGATCCGCCGTGTGTTCGATCCACGT 1572 Query 1463 CGATGGAGCCATGTTACCTAACTCCTCCGTCTCATGGATGTGAAGCTGACTGGGGAACT- 1521 |||||||||| |||| ||| ||||||||| ||||||||||||| || ||||||||||| Sbjct 1573 CGATGGAGCCTTGTTTCCTTACTCCTCCGACTCATGGATGTGATGCCGACTGGGGAACGG 1632 Query 1522 AACTCGGGGAA-GATTCTTCCTTTTGTTAGGCATTGTGAGGATCTTATATATGGGGGGCT 1580 || |||||||| | || |||||||||||||| ||||||||||| |||| ||||| || Sbjct 1633 AA-TCGGGGAAAG-TTGTTCCTTTTGTTAGGTATTGTGAGGAT---ATAT--GGGGG-CT 1684 Query 1581 TAAGCTATATGATGAATTTTAG 1602 ||||||| |||||||||| ||| Sbjct 1685 TAAGCTACATGATGAATTATAG 1706 > Ahg312409 jgi|Araly1|312409|fgenesh1_pm.C_scaffold_1001189 Length=3378 Score = 1177 bits (637), Expect = 0.0 Identities = 1252/1540 (81%), Gaps = 77/1540 (5%) Strand=Plus/Plus Query 103 TCATACTCAAACAACTTTAACAACAAACTTCTTGATG---CTACAACCAAAGTAGACATA 159 |||| ||| ||| |||| |||||| ||||||||| || |||||||||| || | | Sbjct 1876 TCATTCTCTAACGACTTCAACAACCAACTTCTTGTTGCTACTACAACCAACGT-TTC--A 1932 Query 160 AAGGAAACCGAAAAACCG-GTGGATAAACTTATAGGAGGGCTTTTAACTGCGGATTTTGA 218 || |||||||||| |||| | ||||||||| || ||||||||| |||| |||||||| || Sbjct 1933 AACGAAACCGAAACACCGAG-GGATAAACTGATCGGAGGGCTTCTAACCGCGGATTTCGA 1991 Query 219 TGAAGGTTCTTGCTTGAGTAGGTATCATAAATATTTCTTGTACCGCAAGCCATCCCCGTA 278 ||||||||||||||||||||||||||| ||| ||| ||||| |||||| | || ||||| Sbjct 1992 TGAAGGTTCTTGCTTGAGTAGGTATCAGCAATCTTTGTTGTATCGCAAGGCTTCACCGTA 2051 Query 279 CAAGCCTTCTGAATATCTAGTCTCTAAGCTCAGAAGCTATGAGATGCTTCACAAACGTTG 338 ||||||||||||||| || ||||||||||| ||||||||||||| ||||||||| ||||| Sbjct 2052 CAAGCCTTCTGAATACCTTGTCTCTAAGCTTAGAAGCTATGAGAAGCTTCACAAGCGTTG 2111 Query 339 TGGTCCAGATACAGAAT-ATTACAAAG-AAGCAATAGAGAAACTTAGTC--G-TGAT--G 391 ||||||| || | || |||| ||| |||||| ||||| ||| ||| | |||| | Sbjct 2112 CGGTCCAGGCAC-GGATGCTTAC-AAGAAAGCAACAGAGATTCTTGGTCATGATGATGAG 2169 Query 392 -A---TGCAAGCGAATCAAATGGTGAATGCAGATACATTGTATGGGTGGCAGG-TTACGG 446 | ||||||| |||| ||||||||||||||||||||| ||||| || || |||||| Sbjct 2170 AATTTTGCAAGCAAATCTGTTGGTGAATGCAGATACATTGTGTGGGTTGC-GGTTTACGG 2228 Query 447 GCTTGGAAACAGATTACTTACTCTTGCTTCTGTTTTCCTCTACGCTCTCTTGACCGAGAG 506 ||| ||||||||| | ||||||||| | ||||| |||||||||||||||||||| ||||| Sbjct 2229 GCTAGGAAACAGAATCCTTACTCTTTCCTCTGTCTTCCTCTACGCTCTCTTGACAGAGAG 2288 Query 507 AATCATTCTTGTCGA-CAACCGCAAGGATGTTAGTGATCTCTTATGCGAGCCATTTCCAG 565 | || ||||||| || ||| | || ||| | ||||||||||| |||||||| ||||||| Sbjct 2289 AGTCGTTCTTGTTGATCAA-AGTAAAGATATAAGTGATCTCTTCTGCGAGCCGTTTCCAG 2347 Query 566 GTACTTCATGGTTGCTTCCGCTTGACTTTCCAATGCTGAATTATACTTATGCTTG-GGGC 624 ||||||||||||| ||||| ||||| |||| || || || | || | | ||| || Sbjct 2348 GTACTTCATGGTTACTTCCTCTTGA-ATTCCCAT--TG-ATGAAAC--A-GATTGATGGA 2400 Query 625 TACAATAAGGAATATC-CTCGTTGTTACGGAACAATGTCTGAA-AAACATTCCATCAACT 682 ||||| ||| ||| | ||||||||||||||||||||| |||| || || ||||||||| Sbjct 2401 TACAACCAGGGATA-CTCTCGTTGTTACGGAACAATGT-TGAACAATCAAGCCATCAACT 2458 Query 683 CGACTTCAATCCCGCCGCATCTATA-CATGCATAACCTTCATGATTCAAGGGATAGTGAT 741 | |||| |||||| |||||||| || | | |||| ||||||||||||||||||| |||| Sbjct 2459 CCACTTTAATCCCTCCGCATCTCTATC-TTCATATTCTTCATGATTCAAGGGATAATGAT 2517 Query 742 AAGCTGTT-TGTATGCCAAAAGGATCAAAGT-TTGA-TTGACAAAGTCCCATGGTTGATT 798 ||| |||| | | ||||||||||||| ||| || | | ||||||||||| ||||||||| Sbjct 2518 AAGATGTTCT-TCTGCCAAAAGGATC--AGTCTTTAGTCGACAAAGTCCCTTGGTTGATT 2574 Query 799 GTTC-AAGCCAATGTTTACTTTGTTCCATCGT-TATGGTTTAATCCAACTTTCCAAACCG 856 | || |||||||||| |||||||||||||| | ||||||| ||||||||||||||||||| Sbjct 2575 G-TCAAAGCCAATGTCTACTTTGTTCCATC-TCTATGGTTGAATCCAACTTTCCAAACCG 2632 Query 857 AACTAGTTAAGCTGTTCCCGCAGAAAGAAACCGTCTTTCACCA-CTTGGCTCGGTATCTT 915 ||||| | ||||| ||||||||||||||| | ||||||||||| ||| |||||| ||||| Sbjct 2633 AACTAATGAAGCTATTCCCGCAGAAAGAAGCTGTCTTTCACCATCTT-GCTCGGCATCTT 2691 Query 916 TTTCACCCTACAAATGAAGTTT-GGGATATGGTCAC-TGACTACTACCACG-CTCATTTG 972 ||||| || || ||| |||||| ||||| || |||| || | |||| | | || | || Sbjct 2692 TTTCATCCGACGAATCAAGTTTGGGGAT-TGATCACAAGA-TCCTACAATGCCT-ACTTA 2748 Query 973 TCGAA-AGCCGACGAGA-GACTCGGGATTCAAATAAGGGTTTTCGGCAAACCTGATGGA- 1029 || || ||| ||||||| | || || ||||| ||| || | ||| |||| | | |||| Sbjct 2749 TC-AAGAGCAGACGAGACG-CTTGGTATTCAGATACGGATATTCAGCAATCGAGCTGGAT 2806 Query 1030 CGTTTCAAACATGTCATTGACCAGGTCATATCATGTACACAAAGAGAGAAACTGTTACCT 1089 |||| | ||||| || || |||||| || | || |||| ||||||||| || || ||| Sbjct 2807 ATTTTC-AGCATGTAATGGATCAGGTCGTAGCTTGCACACGAAGAGAGAACCTTTTGCCT 2865 Query 1090 GAATTTGCTACACCAGAGGAATCAAAAGTCAATATATCAAAAACCCCGAAACTCAAATCT 1149 ||| ||| ||| ||| |||||||||||||||||||||| || || ||| || ||| || Sbjct 2866 GAACCAGCTGCACAAGAAGAATCAAAAGTCAATATATCAAGAAGCCAGAAGCTTAAAGCT 2925 Query 1150 GTTCTTGTCGCATCTCTCTATCCAGAGTTCTCTGGCAA-CTTAACTAACATGT-TTTCAA 1207 ||||||||| ||||| | |||||||||| |||| | || ||||| ||||||| || | Sbjct 2926 GTTCTTGTCACATCTTTGTATCCAGAGTACTCT-GAAACCTTAAAGAACATGTATTGGGA 2984 Query 1208 AGCGACCAAGTTCAACAGGAGAAATTGTTGAAGTTTATCAACCAAGTGGAGAGAGAGTTC 1267 | ||||| || |||||||| || || |||||||||| || ||||||||||| || |||| Sbjct 2985 A-CGACCGAGCTCAACAGGGGAGATCATTGAAGTTTACCAGCCAAGTGGAGAAAGGGTTC 3043 Query 1268 AGCAAACAGACAAGAAAAGTCACGACCAAAAGGCGCTTGCTGAGATGTATCTTTTGAGCT 1327 | |||||||||||||| ||||||||||||||| || || |||||||||||| | || | Sbjct 3044 AACAAACAGACAAGAAGCTTCACGACCAAAAGGCACTCGCCGAGATGTATCTTCTAAG-T 3102 Query 1328 -TAACCGATAACATTGTCACGAGCGCAAGGTCTACATTTGGATATGTTTCAT-ATAGTCT 1385 |||| |||||||||||||| ||||||||||||||||||||||||||| | | ||||||| Sbjct 3103 CTAACTGATAACATTGTCACAAGCGCAAGGTCTACATTTGGATATGTTGC-TCATAGTCT 3161 Query 1386 TGGAGGATTAAAGCCATGGTTACTTTATCAGCCAACAAATT-TCACCA-CTCCTAATCCG 1443 |||||||||||||||||||||||| |||||||||||| | | || | ||||| |||| Sbjct 3162 TGGAGGATTAAAGCCATGGTTACTCTATCAGCCAACAGGTCCT-AC-AGCTCCTGATCCA 3219 Query 1444 CCATGTGTTCGATCTAAGTCGATGGAGCCATGTTACCTAACTCCTCCGTCTCATGGATGT 1503 || ||| ||||||| | ||| ||||| || ||| |||| ||||||||||||||||||||| Sbjct 3220 CCGTGTATTCGATCCACGTCAATGGACCCTTGTCACCTTACTCCTCCGTCTCATGGATGT 3279 Query 1504 GAAGCTGACTGGGGAACTAACTCGGGGAAGATTCTTCCTTTTGTTAGGCATTGTGAGGAT 1563 ||| | || ||||||||| |||| |||||| | |||||||||| ||||||||||||||| Sbjct 3280 GAACCCGAATGGGGAACTGACTCCGGGAAGGTAGTTCCTTTTGTAAGGCATTGTGAGGAT 3339 Query 1564 CTTAT-ATATGGGGGGCTTAAGCTATATGATGAATTTTAG 1602 | | | | | ||||||||||||| |||||| || ||| Sbjct 3340 CGTGGGA-ACGATGGGCTTAAGCTATTTGATGAGTTATAG 3378 Score = 771 bits (417), Expect = 0.0 Identities = 1084/1393 (78%), Gaps = 98/1393 (7%) Strand=Plus/Plus Query 171 AAAACCG-GTGGATAAACT-TATAGGAGGGCTTTTAACTGCGGATTTTGATGAAGGTTCT 228 ||||||| | ||||||||| | | ||||| |||||||| || ||||| ||||||| |||| Sbjct 174 AAAACCGAG-GGATAAACTGT-TTGGAGGTCTTTTAACCGCTGATTTCGATGAAGATTCT 231 Query 229 TGCTTGAGTAGGTATCATAAATATTTCTTGTACCGCAAGCCATCCCCGTACAAG-CCTTC 287 |||||||||||||||| | | || |||||| |||||||| || || ||| || |||| Sbjct 232 TGCTTGAGTAGGTATC---AGTCTTCCTTGTATCGCAAGCCTTCGCCTTAC-AGAACTTC 287 Query 288 TGAATATCTAGTCTCTAAGCTCAGAAG-CTATGAGATGCTTCACAAACGTTGTGGTCCAG 346 ||||||||||||||||||||| || || ||||||| | |||||||| ||||| ||||||| Sbjct 288 TGAATATCTAGTCTCTAAGCTTAG-AGACTATGAGCTACTTCACAAGCGTTGCGGTCCAG 346 Query 347 ATACAGAAT-ATTACAAAG-AAGCAATAGAGAAACTTAGTCGTGATGATG-CAA-----G 398 || | || |||| ||| |||||| |||||| ||| ||| |||| ||| || | Sbjct 347 GCACTG-ATGCTTAC-AAGAAAGCAACAGAGAAGCTTGGTCATGATCATGAGAATGTTGG 404 Query 399 CGA-A--TCAAATGGTGAATGCAGATACATTGTATGGGTGGCAGGTTACGGGCTTGGAAA 455 || | || ||||||||||| ||||||||| |||||||| | ||| ||||||||||| Sbjct 405 AGATAGCTCTGCTGGTGAATGCAAATACATTGTGTGGGTGGCTGTTTATGGGCTTGGAAA 464 Query 456 CAGATTACTTACTCTTGCTTCTGTTTTCCTCTACGCTCTCTTGACCGAGAGAATCATTCT 515 |||| |||| |||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct 465 CAGAATACTCACTCTTGCTTCTGTGTTCCTCTATGCTCTCTTGACAGAGAGAATCATTCT 524 Query 516 TGTCGA-CAACCGCAAGGATGTTAGTGATCTCTTATGCGAGCCATTTCCAGGTACTTCAT 574 ||| || ||| ||||||||| ||||||||||||| || ||||| ||||| |||||||| | Sbjct 525 TGTGGACCAA-CGCAAGGATATTAGTGATCTCTTCTGTGAGCCTTTTCCGGGTACTTCCT 583 Query 575 GGTTGCTTCCGCTTGACTTTCCAATGCTGAATTATACTTATGCTTGGGGCTACAATAAGG 634 |||| ||||| ||||| |||||| || || | | | || | | | | ||| || Sbjct 584 GGTTACTTCCTCTTGATTTTCCATTGATGGGTCAGA--TA-G-AT--AGTTTCAACCGGG 637 Query 635 AATATCCTCG--TTGTTACGGAACAATGTCTGAA-AAACATTCCATCAACTCGACTTCAA 691 |||| |||| ||||||||||||||||| |||| || ||| |||| ||||||||| ||| Sbjct 638 AATA--CTCGCATTGTTACGGAACAATGT-TGAAGAATCATACCATTAACTCGACTACAA 694 Query 692 TCCCGCCGCATCTATA-CATGCATAACCTTCATGATTCA-AGGGAT-AGTGATAAGCTGT 748 |||| | ||||| || | | ||| || ||||||| | || ||| || || ||| ||| Sbjct 695 TCCCATCACATCTTTATC-TTCATCTTCTCCATGATT-ACAGAGATCAG-GACAAGATGT 751 Query 749 T-TGTATGCCAAAAGGATCAAAGTTTGATTGACAAAGTCCCATGGTTGATTGTTC-AAGC 806 | | | ||||| ||||||||| ||| || ||||||||||| ||| || ||| || || | Sbjct 752 TCT-TCTGCCATAAGGATCAATCTTTAATCGACAAAGTCCCTTGGCTGGTTG-TCAAATC 809 Query 807 CAATGTTTACTTTGTTCCATCGT-TATGGTTTAATCCAACTTTCCAAACCGAACT-AGTT 864 ||| |||||||| ||||||| | ||||| | ||||| | ||||||| ||||||| | | Sbjct 810 CAACCTTTACTTTATTCCATC-TCTATGGCTGAATCCTAGTTTCCAACCCGAACTCA-TC 867 Query 865 AAGCTGTTCCCGCAGAAAGAAACCGTCTTTC-ACCACTTGGCTCGGTATCTTTTTCACCC 923 ||||| |||||||||||||| |||||| ||| ||||| |||| || |||||||||||||| Sbjct 868 AAGCTATTCCCGCAGAAAGACACCGTC-TTCTACCACCTGGCACGCTATCTTTTTCACCC 926 Query 924 TACAAATGAAGTTTGGGATATGGTCA-CTGACTACTACCACGC-TCATTTGTCGAA-AGC 980 ||||| |||| |||| |||||||| | || | |||| | || | | || || || ||| Sbjct 927 GACAAACCAAGTCTGGGGTATGGTCACCAGA-TCCTACAATGCAT-ACTTATC-AAGAGC 983 Query 981 CGACGAGAGACTCGGGATTCAAATAAGGGTTTTCGGCAAACCTGA-TGGACGTTTCAAAC 1039 ||||||| |||||||||||||||| |||||||| ||| | | | | | |||| | | Sbjct 984 AGACGAGATACTCGGGATTCAAATACGGGTTTTCAGCAGA-CAAACTAAATATTTCCAGC 1042 Query 1040 ATGTCATTG-ACCAGGTCATATCATGTACACAAAGAGAGAAACTGTTACCTGAATTTGCT 1098 | || | || ||||| || || | |||||||||||||||||||||||||||||| ||| Sbjct 1043 ACGT-AATGAACCAGATCGTAGCCTGTACACAAAGAGAGAAACTGTTACCTGAAGCAGCT 1101 Query 1099 ACACCAG-AGGAATCAAAAGTCAATA-TA--TCAAAAAC-CCCGAAACTCAAATCTGTTC 1153 || | || || ||||| |||||| || || ||||| | ||| ||||| ||| |||| | Sbjct 1102 ACGCAAGGAG-AATCACAAGTCACTAATACATCAAATCCTCCC-AAACTTAAAGCTGTCC 1159 Query 1154 TTGTCGCATCTCTCTATCCAGAGTTCTCTGGCAACTTAACTAACATGTTTTCA-AAGCGA 1212 | ||| ||||||| ||||||| | |||| ||| ||| ||||||| || || || Sbjct 1160 TGGTCACATCTCTGAATCCAGAATACTCTAATAACCTAAAGAACATGTATTGGGAA-CGC 1218 Query 1213 CCAAGTTCAACAGGAGAAATTGTTGAAGTTTATCAACCAAGT-GGAGA----GAGA--G- 1264 |||| | |||||||||| || || |||||||||| |||||| ||| | |||| | Sbjct 1219 CCAACTACAACAGGAGACATAGTAAAAGTTTATCAGCCAAGTAGGAAAAAACGAGAAAGG 1278 Query 1265 TT-CAGCAAACAGACAAGAAAAGTCACGACCAAAAGGCGCTTGCTGAGATGTATCTTTTG 1323 || ||||||||||||||||| ||||||||||||||| || || |||||||| || | Sbjct 1279 TTTCAGCAAACAGACAAGAAGCTTCACGACCAAAAGGCACTCGCAGAGATGTACCTCCTA 1338 Query 1324 AGCTTAACCGAT-AACATTGTCACGAGCGCAAGGTCTACATTTGGATATGTTTCAT-ATA 1381 ||| |||| ||| ||| | |||| ||| | ||| |||||||||||||| | | | | Sbjct 1339 AGCCTAACTGATCAAC-TAATCACAAGCTCTTCGTCAACATTTGGATATGTAGC-TCA-A 1395 Query 1382 G-TCTTGGAGGATTAAAGCCATGGTTACTTTAT-CAGCCAACA-AATTTCACCACTCCTA 1438 | ||||||||| |||||||||||| |||| || || |||| | || |||| ||||||| Sbjct 1396 GGTCTTGGAGGGTTAAAGCCATGGATACTCTACACA-CCAA-AGAAGTTCAAAACTCCTA 1453 Query 1439 ATCCGCCATGTGTTCGA--TCTAAGTCGATGGAGCCATGTTACCTAACTCCTCC-GTCTC 1495 |||| ||||||| ||| | || || |||||||| |||| |||||| ||||| | ||| Sbjct 1454 ATCCACCATGTGGTCGCGGTGTA--TCCATGGAGCCTTGTTTCCTAACCCCTCCAG-CTC 1510 Query 1496 ATGGATGTGAAGC 1508 |||||| ||||| Sbjct 1511 GTGGATGCGAAGC 1523 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60030226120 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5