BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G15390.2
Length=1805
Score E
Sequences producing significant alignments: (Bits) Value
Ahg480406 jgi|Araly1|480406|fgenesh2_kg.3__3107__AT2G15390.2 2702 0.0
Ahg906274 jgi|Araly1|906274|Al_scaffold_0003_3402 1615 0.0
Ahg312409 jgi|Araly1|312409|fgenesh1_pm.C_scaffold_1001189 1382 0.0
> Ahg480406 jgi|Araly1|480406|fgenesh2_kg.3__3107__AT2G15390.2
Length=1783
Score = 2702 bits (1463), Expect = 0.0
Identities = 1691/1800 (94%), Gaps = 20/1800 (1%)
Strand=Plus/Plus
Query 1 AGAATATTCAAAGTTTTATCTTATTGATCAGTGATTGACATTAAAAGTTGTAATCAAGTT 60
||||||||||||||||||||||||| | | |||||||||| |||||||||||||||||||
Sbjct 1 AGAATATTCAAAGTTTTATCTTATTAAGCTGTGATTGACAATAAAAGTTGTAATCAAGTT 60
Query 61 ATATAAGCGTTGTAAACTCTTTTTGAATCATCTTCACAAACTAAAAGTCAACATGTATCA 120
||||||| ||| | || || | | |||| || | |||| |||||||||||||||||
Sbjct 61 ATATAAGAGTTTTGAA-TC-ATCT---TCATATT-A-GAACT-AAAGTCAACATGTATCA 112
Query 121 TATATTTCAGATCTCCGGCGAAGTTATCAAGGGTTTGGGATTGAAGACGAAAATTCTGAT 180
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 113 TATATTTCAGATCTCCGGCGAAGTTATCAAGGCTTTGGGGTTGAAGACGAAAATTCTGAT 172
Query 181 AACCA-TCGTCTTTAGTACCTTACTAATTTTGTCTGTTATGTTACTT-TCATTCTCAAAC 238
|| || ||||||||||||||||||||||||||||||| |||||| || || |||||||||
Sbjct 173 AA-CAGTCGTCTTTAGTACCTTACTAATTTTGTCTGTAATGTTA-TTATCGTTCTCAAAC 230
Query 239 AACTTCAACAATAAACTTTTTGCTGCTACAATCAACGACGAATCCGAAACACCGGGGCGG 298
|||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||
Sbjct 231 AACTTCAACAATAAACTTTTTGCTGCTACAATCAACGATGAATCCGAAACACC--GG-GG 287
Query 299 GATAGACTAATAGGAGGGCTTTTAACCGCAGATTTCGATGAAGGTTCTTGCTTGAGTAGG 358
|||| ||| |||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 288 GATAAACTGATAGGAGGGCTTTTAACCGCGGATTTCGATGAAGGATCTTGCTTGAGTAGG 347
Query 359 TATCATAAAACTTTCTTGTATCGCAAGCCTTCACCATACAAGCCGTCTGAATATCTTGTC 418
|||||||||| ||||||||| ||||||||||| ||||||||||| || |||||||| |||
Sbjct 348 TATCATAAAAATTTCTTGTACCGCAAGCCTTCGCCATACAAGCCTTCCGAATATCTCGTC 407
Query 419 TCGAAGCTTAGAAGCTATGAGATGCTTCACAAACGTTGCGGTCCAGGGACAAAAGCTTAC 478
|| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 408 TCTAAGCTTAGAAGCTATGAGATGATTCACAAACGTTGCGGTCCAGGGACAAATGCTTAC 467
Query 479 AAGGAAGCAACAAAGCATCTTAGTCATGATGAGAATTATAATGCAAGCAAATCAGATGGT 538
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 468 AAGAAAGCAACAAAGCATCTTAGTCATGATGAGAATTATAATGCAAGCAGATCAGATGGT 527
Query 539 GAATGCCGATACGTTGTGTGGCTCGCTGATTACGGGCTTGGAAACCGACTACTCACTCTT 598
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 528 GAATGCCGATATGTTGTGTGGCTCGCGGATTACGGGCTTGGAAACCGACTACTCACTCTT 587
Query 599 GCTTCTGTGTTCCTCTACGCTCTCTTGACTGATAGAATCATTCTTGTTGACAACCGCAAG 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 588 GCTTCTGTGTTCCTCTACGCTCTCTTGACTGATAGAATCATTCTTGTTGACAACCGGAAG 647
Query 659 GATATTGGTGATCTCTTATGCGAGCCATTTCCAGGTACTTCATGGTTGCTTCCTCTCGAC 718
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 648 GATATTGGTGATCTCTTATGCGAGCCATTTCCAGGTACTTCATGGTTGCTTCCTCTTGAC 707
Query 719 TTTCCATTGATGAAATATGCTGATGGATACCACAAGGGATACTCTCGTTGTTACGGAACA 778
|||||||||||||||||| || |||||||| |||||| |||| |||||||||| ||||||
Sbjct 708 TTTCCATTGATGAAATATACTTATGGATACAACAAGGAATACCCTCGTTGTTATGGAACA 767
Query 779 ATGTTGGAAAATCATTCCATCAACTCGACTTCATTCCCGCCACATCTATATATGCATAAC 838
||| |||||||||||||||||||||||||||| |||| || ||||||||| | ||||||
Sbjct 768 ATGGAGGAAAATCATTCCATCAACTCGACTTCAATCCCACCTCATCTATATCTACATAAC 827
Query 839 CTTCATGATTCAAGGGATAGTGATAAGATGTTCTTCTGCCAAAAGGATCAAAGTTTGATT 898
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 828 CTCCATGATTCAAGGGATAGTGATAAGATGTTCTTCTGCCAAAAGGATCAAAGTTTGATT 887
Query 899 GACAAAGTCCCTTGGTTGATATTTAGAGCCAATGTTTACTTTGTTCCATCTTTATGGTTT 958
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 888 GACAAAGTCCCTTGGTTGATTTTTAGAGCCAATGTTTACTTTGTTCCATCTTTATGGTTT 947
Query 959 AATCCAACTTTCCAAACCGAACTAACGAAGCTGTTTCCGCAGAAAGAAACCGTGTTTCAC 1018
|||||||| |||||| |||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 948 AATCCAACATTCCAAGCCGAACTAACTAAGCTGTTTCCGCAGAAAGAAACCGTCTTTCAC 1007
Query 1019 CACTTGGGTCGGTATCTTTTTCACCCTAAAAATCAAGTTTGGGATATCGTCACTAAGTAC 1078
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1008 CACTTGGCTCGGTATCTTTTTCACCCCAAAAATCAAGTTTGGGATATCGTCACTAAGTAC 1067
Query 1079 TACCATGATCACTTATCCAAAGCAGATGAGAGACTCGGGATTCAAATTCGGGTTTTTCGC 1138
|| ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||
Sbjct 1068 TATCATGATCACTTATCCAAAGCAGAGGAGAGACTCGGGATTCAAATTCGAGTCTTTCGC 1127
Query 1139 GATCAAGGTGGATACTACCAACACGTCATGGACCAGGTCATATCCTGCACACAAAGAGAG 1198
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 1128 GATCAAGGTGGATACTACCAACACGTCATGGACCAAGTCATATCATGCACACAAAGAGAG 1187
Query 1199 AAACTTTTGCCTGAATTGGCTACACAAGAAGAATCAAAAGTCAACATATCGAACATTCCA 1258
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 1188 AAACTTTTGCCTGAATTGTCTACACAAGAAGAATCAAAAGTCAACATATCGAACACACCA 1247
Query 1259 AAAAGTAAAGCTGTTCTTGTCACTTCTTTGTCTCCTGAGTACTCTAAGAAACTAGAGAAC 1318
||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1248 AAACTTAAAGCTGTTCTTGTCACTTCTTTGTCTCCTGAGTACTCTAAAAAACTAGAGAAC 1307
Query 1319 ATGTTTTCAGAGCGAGCAAATATGACGGGAGAGATTATTAAAGTATATCAGCCAAGTGGA 1378
||||||||||||||| ||||| |||| |||||||||||| |||| |||||||||||||||
Sbjct 1308 ATGTTTTCAGAGCGATCAAATTTGACAGGAGAGATTATTGAAGTTTATCAGCCAAGTGGA 1367
Query 1379 GAAAGGTATCAACAAACAGACAAGAAGGTTCACGACCAAAAGGCGCTTGCTGAGATGTAT 1438
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1368 GAAAGGTATCAACAAACAGACAAGAAGCAACACGACCAAAAGGCGCTTGCTGAGATGTAT 1427
Query 1439 CTTTTGAGCTTAACCGATAACATTGTTGCAAGCTCAAGGTCAACATTTGGATATGTTGCT 1498
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 1428 CTTTTGAGCTTAACCGATAACATTGTTACAAGCTCAAGGTCTACATTTGGATATGTTGCT 1487
Query 1499 TATAGTCTTGGAGGATTAAAGCCATGGTTACTTTATCTGCCAAATGATAACAAAGCTCCT 1558
||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1488 TATAGTCTTGGAGCATTAAAGCCATGGTTACTTTATCTGCCAAATGATCTCAAAGCTCCT 1547
Query 1559 GATCCGCCGTGTGTTCGATCCACGTCGATGGAGCCTTGTTTCCTTACTCCTCCGACTCAT 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1548 GATCCGCCGTGTGTTCGATCCACGTCGATGGAGCCTTGTTTCCTTACTCCTCCGACTCAT 1607
Query 1619 GGATGTGAA-CCTGACGCATGGGGAACTGAATCGGGGAAAGTTGTTCCTTTTGTTAGGTA 1677
|||||||| || ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1608 GGATGTGATGCC-GAC---TGGGGAACGGAATCGGGGAAAGTTGTTCCTTTTGTTAGGTA 1663
Query 1678 TTGTGAGGATATATGGGGGCTTAAGCTTTTTGATGAGTTATAGATATTGTTTATCACATT 1737
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 1664 TTGTGAGGATATATGGGGGCTTAAGCTACATGATGAATTATAGATATTGTTTATCACATT 1723
Query 1738 TGATTTGATTTGATTGTTGAATTATTGAAACATAGGATAAATGTTATATATCTTCCTTTT 1797
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1724 TGATTTCATTTGATTGTTGAATTATTGAAACATAGGATAAATGTTATATATCTTTCTTTT 1783
> Ahg906274 jgi|Araly1|906274|Al_scaffold_0003_3402
Length=1605
Score = 1615 bits (874), Expect = 0.0
Identities = 1396/1640 (85%), Gaps = 67/1640 (4%)
Strand=Plus/Plus
Query 113 ATGTATCATATATTTCAGATCT-CCGGCGAAGTTATCAAGGGTTTGGGATTGAAGACGAA 171
|||||||| ||||||||||| | ||| ||||| |||||| ||||| ||||||| |||
Sbjct 1 ATGTATCACATATTTCAGATTTACCGAAAAAGTT-TCAAGGCATTGGGGTTGAAGAAGAA 59
Query 172 AATTCTGATAACCA-TCGTCTTTAGTACCTTACTAATTTTGTCTGTTATGTTACTTTCAT 230
||||||||| | || |||||||| || |||| ||| ||| |||| ||||
Sbjct 60 AATTCTGAT-AGCAGTCGTCTTTGGTTGCTTAGTAA---------TTA---TACTATCAT 106
Query 231 TCTCAAACAACTTCAACAA-TAAACTT-TT--TGCTGCTA-CAATCA-A-CGACGAATCC 283
||||||||||||||||||| ||| || || || | | | ||| | | || ||||||
Sbjct 107 TCTCAAACAACTTCAACAACCAAA-TTCTTAATGATACAACCAAAGATATAGAAGAATCC 165
Query 284 GAAACACCGGGGCGGGATAGACTAATAGGAGGGCTTTTAACCGCAGATTTCGATGAAGGT 343
|||| ||| || ||||| ||| ||||||||||||||||| || ||||||||||||||
Sbjct 166 GAAAGACC--GG-TGGATAAACTTATAGGAGGGCTTTTAACTGCGGATTTCGATGAAGGA 222
Query 344 TCTTGCTTGAGTAGGTATCATAAAACTTTCTTGTATCGCAAGCCTTCACCATACAAGCCG 403
||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct 223 TCTTGCTTGAGTAGGTATCATAAAACTTTCTTGTACCGCAAGCCTTCCCCATATAAGCCT 282
Query 404 TCTGAATATCTTGTCTCGAAGCTTAGAAGCTATGAGATGCTTCACAAACGTTGCGGTCCA 463
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 283 TCTGAATATCTCGTCTCTAAGCTTAGAAGCTATGAGATGCTTCACAAACGTTGCGGTCCA 342
Query 464 GGGACAAAAGCTTACAAGGAAGCAACAAAGCATCTTAGTCATGATGAGAATTATAATGCA 523
| |||||||||||||| ||||||||| || | ||||||| |||||| ||||| |||
Sbjct 343 GATACAAAAGCTTACAAAGAAGCAACAGAGAAACTTAGTCGCGATGAGTATTAT---GCA 399
Query 524 AGCAAATCAGATGGTGAATGCCGATACGTTGTGTGGCTCGCTGATTACGGGCTTGGAAAC 583
||| || || |||||||||| ||||| |||||||| |||| | |||||||||||||||
Sbjct 400 AGCGAAGCAAATGGTGAATGTAGATACATTGTGTGGGTCGCAGGTTACGGGCTTGGAAAT 459
Query 584 CGACTACTCACTCTTGCTTCTGTGTTCCTCTACGCTCTCTTGACTGATAGAATCATTCTT 643
|| |||| ||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 460 AGATTACTTACTCTTGCTTCTGTGTTCCTCTACGCTCTCTTGACCGAGAGAATCATTCTT 519
Query 644 GTTGACAACCGCAAGGATATTGGTGATCTCTTATGCGAGCCATTTCCAGGTACTTCATGG 703
|||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||
Sbjct 520 GTTGACAACCGCAAGGATGTTAGTGATCTCTTATGCGAGCCATTCCCAGGTACTTCATGG 579
Query 704 TTGCTTCCTCTCGACTTTCCATTGATGAAATATGCTGATG---GA---TACCACAAGGGA 757
||||||||||| ||||||||| || |||| ||| || ||| | ||| | |||| |
Sbjct 580 TTGCTTCCTCTTGACTTTCCAATGTTGAATTATACTTATGCTTGGGGCTACAATAAGGAA 639
Query 758 TACTCTCGTTGTTACGGAACAATGTTGGAAAATCATTCCATCAACTCGACTTCATTCCCG 817
||| |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 640 TACCCTCGTTGTTATGGAACAATGGAGGAAAATCATTCCATCAACTCGACTTCAATCCCG 699
Query 818 CCACATCTATATATGCATAACCTTCATGATTCAAGGGATAGTGATAAGATGTTCTTCTGC 877
|| |||||||| ||||||||||| |||||||||||||||||||||||| ||||| |||||
Sbjct 700 CCCCATCTATACATGCATAACCTCCATGATTCAAGGGATAGTGATAAGTTGTTCATCTGC 759
Query 878 CAAAAGGATCAAAGTTTGATTGACAAAGTCCCTTGGTTGATAT-TT-AGAGCCAATGTTT 935
|||||||||||||||||||| |||||||||||||||||||| | || | |||||||||||
Sbjct 760 CAAAAGGATCAAAGTTTGATCGACAAAGTCCCTTGGTTGAT-TGTTCA-AGCCAATGTTT 817
Query 936 ACTTTGTTCCATCTTTATGGTTTAATCCAACTTTCCAAACCGAACTAACGAAGCTGTTTC 995
|||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||
Sbjct 818 ACTTTGTTCCATCTTTATGGTTCAATCCAAATTTCCAAACCGAACTAGTTAAGCTGTTTC 877
Query 996 CGCAGAAAGAAACCGTGTTTCACCACTTGGGTCGGTATCTTTTTCACCCTAAAAATCAAG 1055
|||||||||| ||||| |||||||| |||| ||||||||||||||| || | ||||||||
Sbjct 878 CGCAGAAAGACACCGTCTTTCACCATTTGGCTCGGTATCTTTTTCATCCGACAAATCAAG 937
Query 1056 TTTGGGATATCGTCACTAAGTACTACCATGATCACTTATCCAAAGCAGATGAGAGACTCG 1115
|||||||||| ||||||||||||||| ||| ||| |||||||||||||| |||||||| |
Sbjct 938 TTTGGGATATGGTCACTAAGTACTACGATGCTCATTTATCCAAAGCAGACGAGAGACTTG 997
Query 1116 GGATTCAAATTCGGGTTTTTCGCGATCAAGGTGGATACTACCAACACGTCATGGACCAGG 1175
|||||||||| ||||||||| || | | ||||| | |||||| ||||||||||| |
Sbjct 998 GGATTCAAATACGGGTTTTTGGCAAACCTTCTGGATTTTTCCAACATGTCATGGACCAAG 1057
Query 1176 TCATATCCTGCACACAAAGAGAGAAACTTTTGCCTGAATTGGCTACACAAGAAGAATCAA 1235
|| || | || |||||||| |||||||| ||||||||||| |||||||||||||||| ||
Sbjct 1058 TCGTAGCATGTACACAAAGGGAGAAACTGTTGCCTGAATTTGCTACACAAGAAGAATTAA 1117
Query 1236 AAGTCAACATATCGAACATTCCAAAAAGTAAAGCTGTTCTTGTCACTTCTTTGTCTCCTG 1295
|||||||||||||||| | || ||| ||||||||||||||| | ||| | | ||| |
Sbjct 1118 AAGTCAACATATCGAAAACCCCGAAACTTAAAGCTGTTCTTGTGGCATCTCTCTATCCAG 1177
Query 1296 AGTACTCTAAGAAACT-AGA-GAACATGTTTTCAGA-GCGAGCAAATATGA-CGGGAGAG 1351
|||||||| | |||| | | |||||||||||| || |||| ||| | | | | |||||
Sbjct 1178 AGTACTCTG-GCAACTTA-ACGAACATGTTTTC-GAAGCGACCAAGT-TCAACAGGAGAA 1233
Query 1352 ATTATTAAAGTATATCAGCCAAGTGGAGAAAG-GTATCAACAAACAGACAAGAAGGTTCA 1410
||| || |||| |||||||||||||||||||| || ||| ||||||||||||||| | ||
Sbjct 1234 ATTGTTGAAGTTTATCAGCCAAGTGGAGAAAGAGT-TCAGCAAACAGACAAGAAGATACA 1292
Query 1411 CGACCAAAAGGCGCTTGCTGAGATGTATCTTTTGAGCTTAACCGATAACATTGTTGCAAG 1470
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 1293 TGACCAAAAGGCGCTTGCTGAAATGTATCTTTTGAGCTTAACCGATAACATTGTCACAAG 1352
Query 1471 CTCAAGGTCAACATTTGGATATGTTGCTTATAGTCTTGGAGGATTAAAGCCATGGTTACT 1530
| ||||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||
Sbjct 1353 CGCAAGGTCTACATTTGGATATGTTTCTTATAGTCTTGGAGGACTAAGGCCATGGTTACT 1412
Query 1531 TTATCTGCCAA-ATGATAACA-AAGCTCCTGATCCGCCGTGTGTTCGATCCACGTCGATG 1588
||||| ||||| | || || || ||||| ||||||||||||||||||||| |||||||
Sbjct 1413 TTATCAGCCAACAA-ATTTCACAA-CTCCTAATCCGCCGTGTGTTCGATCCAAGTCGATG 1470
Query 1589 GAGCCTTGTTTCCTTACTCCTCCGACTCATGGATGTGAACCTGACGCATGGGGAACTGAA 1648
||||| |||| ||||||||||||| |||||||||||||| ||||| | ||| || ||
Sbjct 1471 GAGCCATGTTACCTTACTCCTCCGTCTCATGGATGTGAAGCTGACTC--GGGAAAA--AA 1526
Query 1649 -TCGGGGAA-AGTTGTTCCTTTTGTTAGGTATTGTGAGGATAT-ATG---GGGG--CTTA 1700
|||||||| | || |||||||||||||| ||||||||||||| ||| |||| ||||
Sbjct 1527 CTCGGGGAAGA-TTCTTCCTTTTGTTAGGCATTGTGAGGATATTATGTATGGGGGGCTTA 1585
Query 1701 AGCTTTTTGATGAGTTATAG 1720
|||| | |||||| || |||
Sbjct 1586 AGCTATATGATGAATTTTAG 1605
> Ahg312409 jgi|Araly1|312409|fgenesh1_pm.C_scaffold_1001189
Length=3378
Score = 1382 bits (748), Expect = 0.0
Identities = 1353/1635 (83%), Gaps = 81/1635 (5%)
Strand=Plus/Plus
Query 131 ATCTCCGGCGAAG-TTATCAAGGG-TTTGGGATTGAAGACGAAAATTCTGATAACCATCG 188
|||||||| |||| || | |||| ||| | ||||||| ||| ||||||||||| ||
Sbjct 1780 ATCTCCGGTGAAGCTT-T-GAGGGCTTTTAGTTTGAAGATGAAGATTCTGATAACAATAA 1837
Query 189 TCTTTAGTACCTTACTAATTTTGTCTGTTA-TGTTACTTTCATTCTCAAACAACTTCAAC 247
|||||||| ||||||||||| ||| | || ||||| |||||||||| ||| ||||||||
Sbjct 1838 TCTTTAGTGGCTTACTAATTTGGTCCG-TAGTGTTAGTTTCATTCTCTAACGACTTCAAC 1896
Query 248 AATAAAC-T-TT-TTGCTGCTACAATCAACG------ACGAATCCGAAACACCGGGGCGG 298
|| ||| | || ||||| |||||| ||||| ||||| |||||||||| | ||
Sbjct 1897 AACCAACTTCTTGTTGCTACTACAACCAACGTTTCAAACGAAACCGAAACACC---GAGG 1953
Query 299 GATAGACTAATAGGAGGGCTTTTAACCGCAGATTTCGATGAAGGTTCTTGCTTGAGTAGG 358
|||| ||| || ||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 1954 GATAAACTGATCGGAGGGCTTCTAACCGCGGATTTCGATGAAGGTTCTTGCTTGAGTAGG 2013
Query 359 TATCATAAAACTTTCTTGTATCGCAAGCCTTCACCATACAAGCCGTCTGAATATCTTGTC 418
||||| || |||| |||||||||||| ||||||| |||||||| |||||||| ||||||
Sbjct 2014 TATCAGCAATCTTTGTTGTATCGCAAGGCTTCACCGTACAAGCCTTCTGAATACCTTGTC 2073
Query 419 TCGAAGCTTAGAAGCTATGAGATGCTTCACAAACGTTGCGGTCCAGGGACAAAAGCTTAC 478
|| ||||||||||||||||||| ||||||||| |||||||||||||| || | ||||||
Sbjct 2074 TCTAAGCTTAGAAGCTATGAGAAGCTTCACAAGCGTTGCGGTCCAGGCACGGATGCTTAC 2133
Query 479 AAGGAAGCAACAAAGCAT-CTTAGTCATGATGA-GA-A-TTATAATGCAAGCAAATCAGA 534
||| |||||||| || || ||| |||||||||| || | || | |||||||||||| |
Sbjct 2134 AAGAAAGCAACAGAG-ATTCTTGGTCATGATGATGAGAATT-T--TGCAAGCAAATCTGT 2189
Query 535 TGGTGAATGCCGATACGTTGTGTGGCTCGCTGATTACGGGCTTGGAAACCGACTACTCAC 594
|||||||||| ||||| |||||||| | || | ||||||||| |||||| || | || ||
Sbjct 2190 TGGTGAATGCAGATACATTGTGTGGGTTGCGGTTTACGGGCTAGGAAACAGAATCCTTAC 2249
Query 595 TCTTGCTTCTGTGTTCCTCTACGCTCTCTTGACTGATAGAATCATTCTTGTTGA-CAACC 653
|||| | ||||| |||||||||||||||||||| || ||| || |||||||||| |||
Sbjct 2250 TCTTTCCTCTGTCTTCCTCTACGCTCTCTTGACAGAGAGAGTCGTTCTTGTTGATCAAA- 2308
Query 654 GCAAGGATATTGGTGATCTCTTATGCGAGCCATTTCCAGGTACTTCATGGTTGCTTCCTC 713
| || ||||| |||||||||| |||||||| |||||||||||||||||||| |||||||
Sbjct 2309 GTAAAGATATAAGTGATCTCTTCTGCGAGCCGTTTCCAGGTACTTCATGGTTACTTCCTC 2368
Query 714 TCGACTTTCCATTGATGAAATATGCT-GATGGATACCACAAGGGATACTCTCGTTGTTAC 772
| || || |||||||||||| | | | ||||||||| || ||||||||||||||||||||
Sbjct 2369 TTGAATTCCCATTGATGAAACA-GATTGATGGATACAACCAGGGATACTCTCGTTGTTAC 2427
Query 773 GGAACAATGTTGGAA-AATCATTCCATCAACTCGACTTCATTCCCGCCACATCTATATAT 831
|||||||||||| || ||||| |||||||||| |||| | |||| || ||||| ||| |
Sbjct 2428 GGAACAATGTTG-AACAATCAAGCCATCAACTCCACTTTAATCCCTCCGCATCTCTATCT 2486
Query 832 GCATAACCTTCATGATTCAAGGGATAGTGATAAGATGTTCTTCTGCCAAAAGGATCAAAG 891
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2487 TCATATTCTTCATGATTCAAGGGATAATGATAAGATGTTCTTCTGCCAAAAGGATCAGTC 2546
Query 892 TTTGATT-GACAAAGTCCCTTGGTTGATATTT-AGAGCCAATGTTTACTTTGTTCCATCT 949
||| | | |||||||||||||||||||| | | | ||||||||| |||||||||||||||
Sbjct 2547 TTT-AGTCGACAAAGTCCCTTGGTTGAT-TGTCAAAGCCAATGTCTACTTTGTTCCATCT 2604
Query 950 TTATGGTTTAATCCAACTTTCCAAACCGAACTAACGAAGCTGTTTCCGCAGAAAGAAACC 1009
||||||| ||||||||||||||||||||||||| |||||| || |||||||||||| |
Sbjct 2605 CTATGGTTGAATCCAACTTTCCAAACCGAACTAATGAAGCTATTCCCGCAGAAAGAAGCT 2664
Query 1010 GTGTTTCACCA-CTTGGGTCGGTATCTTTTTCACCCTAAAAATCAAGTTTGGG-ATATCG 1067
|| |||||||| |||| |||| |||||||||| || | ||||||||||||| || | |
Sbjct 2665 GTCTTTCACCATCTTGC-TCGGCATCTTTTTCATCCGACGAATCAAGTTTGGGGAT-T-G 2721
Query 1068 -TCACTAAG-TACTACCATGA-TCACTTATCCAA-AGCAGATGAGA-GACTCGGGATTCA 1122
|||| ||| | |||| ||| | ||||||| || |||||| |||| | || || |||||
Sbjct 2722 ATCAC-AAGATCCTACAATGCCT-ACTTATC-AAGAGCAGACGAGACG-CTTGGTATTCA 2777
Query 1123 AATTCGGGTTTTTC-GCGATCAAGGTGGATACTACCAACACGTCATGGACCAGGTCATAT 1181
|| ||| | || | || ||| || |||||| | || || || ||||| |||||| ||
Sbjct 2778 GATACGGATATT-CAGCAATCGAGCTGGATATTTTCAGCATGTAATGGATCAGGTCGTAG 2836
Query 1182 CCTGCACACAAAGAGAGAAACTTTTGCCTGAATTGGCTACACAAGAAGAATCAAAAGTCA 1241
| ||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||
Sbjct 2837 CTTGCACACGAAGAGAGAACCTTTTGCCTGAACCAGCTGCACAAGAAGAATCAAAAGTCA 2896
Query 1242 ACATATCGAACATTCCAAAAAG-T-AAAGCTGTTCTTGTCACTTCTTTGTCTCCTGAGTA 1299
| ||||| || | ||| || | | ||||||||||||||||| ||||||| ||| |||||
Sbjct 2897 ATATATC-AAGAAGCCAGAA-GCTTAAAGCTGTTCTTGTCACATCTTTGTATCCAGAGTA 2954
Query 1300 CTCTAAGAAAC-T-AGAGAACATGTTTTCAGAGCGAGCAAA-T-ATGACGGGAGAGATTA 1355
|||| ||||| | | ||||||||| || || ||| | | | | | ||| ||||| |
Sbjct 2955 CTCT--GAAACCTTAAAGAACATGTATTGGGAACGACCGAGCTCAACA-GGG-GAGATCA 3010
Query 1356 TTAAAGTATATCAGCCAAGTGGAGAAAGG-TATCAACAAACAGACAAGAAGGTTCACGAC 1414
|| |||| || |||||||||||||||||| | ||||||||||||||||||| ||||||||
Sbjct 3011 TTGAAGTTTACCAGCCAAGTGGAGAAAGGGT-TCAACAAACAGACAAGAAGCTTCACGAC 3069
Query 1415 CAAAAGGCGCTTGCTGAGATGTATCTTTTGAG-CTTAACCGATAACATTGTTGCAAGCTC 1473
|||||||| || || |||||||||||| | || || ||| ||||||||||| ||||| |
Sbjct 3070 CAAAAGGCACTCGCCGAGATGTATCTTCTAAGTCT-AACTGATAACATTGTCACAAGCGC 3128
Query 1474 AAGGTCAACATTTGGATATGTTGCTTATAGTCTTGGAGGATTAAAGCCATGGTTACTTTA 1533
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 3129 AAGGTCTACATTTGGATATGTTGCTCATAGTCTTGGAGGATTAAAGCCATGGTTACTCTA 3188
Query 1534 TCTGCCAA-ATGATAACAA-AGCTCCTGATCCGCCGTGTGTTCGATCCACGTCGATGGAG 1591
|| ||||| | | | | | |||||||||||| |||||| ||||||||||||| |||||
Sbjct 3189 TCAGCCAACAGG-TC-CTACAGCTCCTGATCCACCGTGTATTCGATCCACGTCAATGGAC 3246
Query 1592 CCTTGTTTCCTTACTCCTCCGACTCATGGATGTGAACCTGACGCATGGGGAACTGAATCG 1651
|||||| ||||||||||||| |||||||||||||||| || |||||||||||| ||
Sbjct 3247 CCTTGTCACCTTACTCCTCCGTCTCATGGATGTGAACCCGA---ATGGGGAACTGACTCC 3303
Query 1652 GGGAAAGTTGTTCCTTTTGTTAGGTATTGTGAGGATA-TATG---G--GGGCTTAAGCTT 1705
||||| || ||||||||||| ||| ||||||||||| | | | |||||||||||
Sbjct 3304 GGGAAGGTAGTTCCTTTTGTAAGGCATTGTGAGGATCGTGGGAACGATGGGCTTAAGCTA 3363
Query 1706 TTTGATGAGTTATAG 1720
|||||||||||||||
Sbjct 3364 TTTGATGAGTTATAG 3378
Score = 854 bits (462), Expect = 0.0
Identities = 1085/1376 (79%), Gaps = 81/1376 (6%)
Strand=Plus/Plus
Query 297 GGGATAGACTAATAGGAGGGCTTTTAACCGCAGATTTCGATGAAGGTTCTTGCTTGAGTA 356
|||||| ||| | ||||| ||||||||||| ||||||||||||| ||||||||||||||
Sbjct 182 GGGATAAACTGTTTGGAGGTCTTTTAACCGCTGATTTCGATGAAGATTCTTGCTTGAGTA 241
Query 357 GGTATCATAAAACTTTCTTGTATCGCAAGCCTTCACCATACAAG-CCGTCTGAATATCTT 415
|||||| | ||| |||||||||||||||||| || ||| || | |||||||||||
Sbjct 242 GGTATC---AGTCTTCCTTGTATCGCAAGCCTTCGCCTTAC-AGAACTTCTGAATATCTA 297
Query 416 GTCTCGAAGCTTAGAAG-CTATGAGATGCTTCACAAACGTTGCGGTCCAGGGACAAAAGC 474
||||| |||||||| || ||||||| | |||||||| |||||||||||||| || | ||
Sbjct 298 GTCTCTAAGCTTAG-AGACTATGAGCTACTTCACAAGCGTTGCGGTCCAGGCACTGATGC 356
Query 475 TTACAAGGAAGCAACAAAGCATCTTAGTCATG---ATGAGAATTATAATGCAAGCA-A-A 529
||||||| |||||||| || | ||| |||||| ||||||| | | || || | |
Sbjct 357 TTACAAGAAAGCAACAGAGAAGCTTGGTCATGATCATGAGAA-TGT--TG-GAG-ATAGC 411
Query 530 TCAGATGGTGAATGCCGATACGTTGTGTGGCTCGCTGATTACGGGCTTGGAAACCGACTA 589
|| | |||||||||| |||| |||||||| | |||| ||| |||||||||||| || ||
Sbjct 412 TCTGCTGGTGAATGCAAATACATTGTGTGGGTGGCTGTTTATGGGCTTGGAAACAGAATA 471
Query 590 CTCACTCTTGCTTCTGTGTTCCTCTACGCTCTCTTGACTGATAGAATCATTCTTGTTGAC 649
|||||||||||||||||||||||||| ||||||||||| || |||||||||||||| |||
Sbjct 472 CTCACTCTTGCTTCTGTGTTCCTCTATGCTCTCTTGACAGAGAGAATCATTCTTGTGGAC 531
Query 650 -AACCGCAAGGATATTGGTGATCTCTTATGCGAGCCATTTCCAGGTACTTCATGGTTGCT 708
||| ||||||||||| |||||||||| || ||||| ||||| |||||||| ||||| ||
Sbjct 532 CAAC-GCAAGGATATTAGTGATCTCTTCTGTGAGCCTTTTCCGGGTACTTCCTGGTTACT 590
Query 709 TCCTCTCGACTTTCCATTGATGAAAT-ATGCT-GATGGATACCACAAGGGA-TACTCTCG 765
|||||| || |||||||||||| | | | | ||| | | | || |||| ||||| |
Sbjct 591 TCCTCTTGATTTTCCATTGATGGG-TCA-GATAGATAGTTTCAACC-GGGAATACTCGCA 647
Query 766 TTGTTACGGAACAATGTTGGAA-AATCATTCCATCAACTCGACTTCATTCCCGCCACATC 824
||||||||||||||||||| || |||||| |||| ||||||||| || |||| ||||||
Sbjct 648 TTGTTACGGAACAATGTTG-AAGAATCATACCATTAACTCGACTACAATCCCATCACATC 706
Query 825 TATATATGCATAACCTTCATGATT-CAAGGGAT-AGTGATAAGATGTTCTTCTGCCAAAA 882
| ||| | ||| || ||||||| || | ||| || || ||||||||||||||||| ||
Sbjct 707 TTTATCTTCATCTTCTCCATGATTACA-GAGATCAG-GACAAGATGTTCTTCTGCCATAA 764
Query 883 GGATCAAAGTTTGATTGACAAAGTCCCTTGGTTGATATTT-AGAGCCAATGTTTACTTTG 941
||||||| ||| || ||||||||||||||| || | | | | | |||| ||||||||
Sbjct 765 GGATCAATCTTTAATCGACAAAGTCCCTTGGCTGGT-TGTCAAATCCAACCTTTACTTTA 823
Query 942 TTCCATCTTTATGGTTTAATCCAACTTTCCAAACCGAACTAA-CGAAGCTGTTTCCGCAG 1000
|||||||| ||||| | ||||| | ||||||| ||||||| | | ||||| || ||||||
Sbjct 824 TTCCATCTCTATGGCTGAATCCTAGTTTCCAACCCGAACTCATC-AAGCTATTCCCGCAG 882
Query 1001 AAAGAAACCGTGTT-TCACCACTTGGGTCGGTATCTTTTTCACCCTAAAAATCAAGTTTG 1059
||||| ||||| || | ||||| ||| || |||||||||||||| | ||| ||||| ||
Sbjct 883 AAAGACACCGTCTTCT-ACCACCTGGCACGCTATCTTTTTCACCCGACAAACCAAGTCTG 941
Query 1060 GGATATCGTCACTA-AGTACTACCATG-ATCACTTATCCAA-AGCAGATGAGAGACTCGG 1116
|| ||| ||||| | | | |||| ||| || ||||||| || |||||| |||| ||||||
Sbjct 942 GGGTATGGTCACCAGA-TCCTACAATGCAT-ACTTATC-AAGAGCAGACGAGATACTCGG 998
Query 1117 GATTCAAATTCGGGTTTTTC-GC-GATCAAGGTGGATACTACCAACACGTCATGGACCAG 1174
||||||||| |||||||| | || || ||| | ||| | ||| ||||| ||| |||||
Sbjct 999 GATTCAAATACGGGTTTT-CAGCAGA-CAAACTAAATATTTCCAGCACGTAATGAACCAG 1056
Query 1175 GTCATATCCTGCACACAAAGAGAGAAACTTTTGCCTGAATTGGCTACACAAGAAGAATCA 1234
|| || |||| ||||||||||||||||| || |||||| ||||| |||| |||||||
Sbjct 1057 ATCGTAGCCTGTACACAAAGAGAGAAACTGTTACCTGAAGCAGCTACGCAAGGAGAATCA 1116
Query 1235 AAAGTCAAC-A-TA--TCGAA-CATTCCAAAAAGTAAAGCTGTTCTTGTCACTTCTTTGT 1289
|||||| | | || || || | | ||||| ||||||||| || ||||| ||| ||
Sbjct 1117 CAAGTCA-CTAATACATCAAATCCTCCCAAACT-TAAAGCTGTCCTGGTCACATCTCTGA 1174
Query 1290 CTCCTGAGTACTCTAAGAAACTAGAGAACATGTTTTCAGAGCGAGCAAATATGACGGGAG 1349
||| || |||||||| || ||| ||||||||| || || || ||| || || ||||
Sbjct 1175 ATCCAGAATACTCTAATAACCTAAAGAACATGTATTGGGAACGCCCAACTACAACAGGAG 1234
Query 1350 AGATTATTAAA-GTATATCAGCCAAGT-GGA------GA-AA-GGTATCAACAAACAGAC 1399
| || | |||| || |||||||||||| ||| || || ||| ||| |||||||||
Sbjct 1235 ACAT-AGTAAAAGTTTATCAGCCAAGTAGGAAAAAACGAGAAAGGTTTCAGCAAACAGAC 1293
Query 1400 AAGAAGGTTCACGACCAAAAGGCGCTTGCTGAGATGTATCTTTTGAGCTTAACCGAT-AA 1458
|||||| |||||||||||||||| || || |||||||| || | ||| |||| ||| ||
Sbjct 1294 AAGAAGCTTCACGACCAAAAGGCACTCGCAGAGATGTACCTCCTAAGCCTAACTGATCAA 1353
Query 1459 CATTGTTGCAAGCTCAAGGTCAACATTTGGATATGTTGCTTATAG-TCTTGGAGGATTAA 1517
| | | ||||||| |||||||||||||||||| ||| | || ||||||||| ||||
Sbjct 1354 C-TAATCACAAGCTCTTCGTCAACATTTGGATATGTAGCTCA-AGGTCTTGGAGGGTTAA 1411
Query 1518 AGCCATGGTTACTTTAT-CTGCCAAATGA--TAACAAAGCTCCTGATCCGCCGTGTGTTC 1574
|||||||| |||| || | ||||| || | |||| ||||| |||| || |||| ||
Sbjct 1412 AGCCATGGATACTCTACACA-CCAAA-GAAGTT-CAAAACTCCTAATCCACCATGTGGTC 1468
Query 1575 GATCCACGT--CGATGGAGCCTTGTTTCCTTACTCCTCC-GACTCATGGATGTGAA 1627
| | || | ||||||||||||||||| || ||||| | ||| |||||| |||
Sbjct 1469 G--CGGTGTATCCATGGAGCCTTGTTTCCTAACCCCTCCAG-CTCGTGGATGCGAA 1521
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67762545855
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5