BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G15880.1
Length=2184
Score E
Sequences producing significant alignments: (Bits) Value
Ahg906331 jgi|Araly1|906331|Al_scaffold_0003_3459 3110 0.0
Ahg491276 jgi|Araly1|491276|fgenesh2_kg.7__709__AT4G33970.1 876 0.0
Ahg351872 jgi|Araly1|351872|fgenesh1_pg.C_scaffold_6002465 662 0.0
> Ahg906331 jgi|Araly1|906331|Al_scaffold_0003_3459
Length=2223
Score = 3110 bits (1684), Expect = 0.0
Identities = 2057/2230 (92%), Gaps = 53/2230 (2%)
Strand=Plus/Plus
Query 1 ATGCCCCATATCTATAAGCAGCCCTTGGGTATTTTCCAAGGTTTTGTTCCAACACTCACC 60
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 1 ATGCCCCATATCTATAAGCAGCCCTTGGGTATTGTCCAAGGTTTTGTTCTAACACTCACC 60
Query 61 GATGCAGAAGTTTCATTTATTGCACAGCGACAGCTCTTGACGTTACCTGAAAATGGTGAA 120
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 61 GATGCAGAAGCTTCATTTATTGCACAACGACAGCTCTTGACGTTACCTGAAAATGGCGAA 120
Query 121 CTTCCTGATGATATTGAGTATGAGGTTGATCTTAAGGTGACATTTGCAAACCATAGGCTT 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 121 CTTCCTGATGATATTGAGTATGAGGTTGATCTTAAGGTGACATTTGCCAACCATAGGCTT 180
Query 181 AAGAGAGCGTATATTGCTCTCCAAGCCTGGAAAAAGGCGGTGTATTCAGACCCGTTTAAC 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AAGAGAGCGTATATTGCTCTCCAAGCCTGGAAAAAGGCGGTGTATTCAGACCCGTTTAAT 240
Query 241 ACCACAGGAAACTGGCATGGCCCTCATGTGTGTGGCTATACGGGTGTGTTCTGTGCCCCG 300
||||| |||||||||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct 241 ACCACGGGAAACTGGCATGGCCCTCATGTGTGTGGCTACACGGGCGTGTTCTGCGCCCCA 300
Query 301 GCTCTTGATGATCCTGACGTCGCGGTTGTGGCGGGGGTTGATTTGAATGGTGCGGATATC 360
||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 301 GCTCTTGATGATCCTAACGTTGCGGTTGTGGCGGGGGTTGATTTGAATGGTGCGGATATT 360
Query 361 GCAGGGCATTTACCGGCTGAACTTGGTTTGATGACAGATGTTGCGATGTTTCATTTGAAT 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 361 GCAGGGCATTTACCGGCTGAACTTGGTTTGATGACAGATGTTGCAATGTTTCATTTGAAT 420
Query 421 TCAAACCGGTTCTGTGGTATCATACCTAAGAGTTTCGAGAAGTTGAGCCTAATGCACGAG 480
|| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 421 TCGAACCGGTTCTGTGGTATCATACCTAAAAGTTTCGAGAAGTTGAGTCTAATGCACGAG 480
Query 481 TTTGATGTCAGCAACAACCGGTTTGTCGGACCTTTCCCTTCTGTTGTCCTCTCGTGGCCG 540
|| ||||||||||||||||||||||| |||||||||||||| || |||||||| ||||||
Sbjct 481 TTCGATGTCAGCAACAACCGGTTTGTTGGACCTTTCCCTTCCGTAGTCCTCTCATGGCCG 540
Query 541 GCTGTTAAGTTCATTGACGTCAGATACAATGATTTCGAAGGTCAAGTCCCTCCTGAGCTT 600
|| ||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 541 GCCGTTAAGTTCATCGACCTTAGATACAATGATTTCGAAGGTCAAGTCCCTCCTGAGCTT 600
Query 601 TTCAAAAAGGATCTCGACGCCATTTTCCTGAACAACAACAGATTCACGTCTACCATTCCT 660
||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 601 TTCAAGAAGGATCTCGATGCCATTTTCTTGAACAACAACAGATTCACGTCTACCATTCCT 660
Query 661 GATTCCCTCGGAGAATCATCAGCCTCCGTTGTGACCTTTGCTCACAACAAATTTAGCGGT 720
||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 661 GATTCTCTCGGAGAATCCTCAGCCTCCGTCGTGACCTTTGCTCACAACAAATTCAGCGGT 720
Query 721 TGTATCCCTAGAAGTATTGGAAACATGAAGAATCTCAACGAGATTATCTTTAAGGACAAC 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 TGTATCCCTAGAAGTATTGGAAACATGAAGAATCTCAACGAGATTATCTTTAAGGACAAC 780
Query 781 AGTCTTGGCGGTTGTTTCCCGTCAGAGATTGGGAAGCTAGCCAATGTGAACGTGTTTGAC 840
|||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||
Sbjct 781 AGTCTTGGCGGTTGTTTCCCATCAGAGATCGGGAAGCTATCCAATGTGAACGTGTTTGAC 840
Query 841 GCTAGCATGAACTCCTTCACTGGTGTTCTACCTCCAAGCTTTGTCGGGCTTACCAGTATG 900
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 841 GCTAGCATGAACTCCTTCACCGGTGTTCTACCTCCAAGCTTTGTCGGGCTTACCAGTCTA 900
Query 901 GAAGAGTTTGATATCTCTGGGAATAAACTCACCGGGTTCATACCAGAGAATATATGCAAG 960
|||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct 901 GAAGAGTTTGATATCTCTGGGAATAAACTCACTGGGTTCATGCCAGAGAATATCTGCAAG 960
Query 961 TTGCCTAAATTGGTTAACTTGACGTACGCCTACAATTACTTCAACGGACAAGGTGATTCA 1020
||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 961 TTGCCTAAATTAGTTAACTTGACGTACGCCTACAATTACTTCAACGGGCAGGGTGATTCA 1020
Query 1021 TGTGTTCCAGGTAGTCAGAAGCAGATTGCATTGGATGATACACGCAACTGCTTGCCAGAT 1080
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1021 TGTGTCCCAGGTAGTCAGAAGGAGATTGCATTGGATGATACACGCAACTGCTTGCCAGAT 1080
Query 1081 CGGCCTAAGCAACGATCGGCCAAGGAATGTGCTGTGGTGATTAGCCGTCCAGTTGATTGT 1140
|| |||||||||||||| |||||||||||||| || ||||||||||||||||| ||||||
Sbjct 1081 CGACCTAAGCAACGATCAGCCAAGGAATGTGCGGTTGTGATTAGCCGTCCAGTCGATTGT 1140
Query 1141 AGTAAGGACAAGTGTGCTGGTGGTTCTAGCCAAGCTACACCGTCGAAGTCTCCATCACCT 1200
|||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct 1141 AGTAAGGACAAGTGTGCTGGTGGTTCTAGCTACGTTACACCGTCGAAGTCTCCATCACCT 1200
Query 1201 GTGCCAACTAGGCCAGTTCATAAACCACAACCACCAAAAGAATCACCACAACCAAATGAC 1260
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1201 GTGCCAACTAGGCCAGTTCATAAACCACAACCACCGAAAGAATCACCACAACCAAATGAC 1260
Query 1261 CCATATAATCAGTCTCCAGTGAAGTTTCGGCGTAGCCCGCCTCCACCACAACAACCACAT 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1261 CCATATAATCAGTCTCCAGTGAAGTTTCGGCGTAGCCCGCCTCCACCACAACAACTACAT 1320
Query 1321 CACCATGTGGTTCACTCTCCACCGCC-A----GC---TTCG-TCTCCTCCTACCTCACCA 1371
|||| ||||||||||||||||||||| | || || ||||||||| |||||||
Sbjct 1321 CACCCTGTGGTTCACTCTCCACCGCCTACACCGCCAGTTTTATCTCCTCCTCCCTCACCG 1380
Query 1372 CCAGTCCATTCAACTCCATCACCGGTTCACAAACCACAACCACCGAAAGAGTCACCGCAA 1431
|| |||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||
Sbjct 1381 CCGGTCCATTCAACTCCATCACCGGTTCATAAACCTCAACCACCGAAAGAGTCGCCGCAA 1440
Query 1432 CCAAATGATCCATATGATCAGTCACCTGTGAAGTTCCGGCGTAGtccacctccacctcct 1491
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 CCAAATGACCCATATGATCAGTCACCTGTGAAGTTCCGGCGTAGTCCACCTCCACCTCCG 1500
Query 1492 gttcactctcccccacctccgtcaccta-ttcactcaccaccaccaccacca---gtata 1547
|||||||||||||||||||| || || | ||||||||||||||||||||||| |||||
Sbjct 1501 GTTCACTCTCCCCCACCTCCATCGCC-AGTTCACTCACCACCACCACCACCACCAGTATA 1559
Query 1548 ttctccaccgcccccaccaccagtatattctccaccgcccccaccaccggtttattctcc 1607
|||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct 1560 TTCTCCACCGCCCCCACCACCAGTCTATTCACCACC------ACCACCGGTTTATTCTCC 1613
Query 1608 accaccaccacctccggtgcattcacctccaccgCCAGTACACTCTCCTCCACCGCCAGT 1667
||| |||||||| || ||||| || ||||||||||||||||| |||||||||||||||||
Sbjct 1614 ACCGCCACCACCACCAGTGCACTCTCCTCCACCGCCAGTACATTCTCCTCCACCGCCAGT 1673
Query 1668 GCATTCTCCACCACC---G---C-C--------------AGTCCATTCACCGCCCCCACC 1706
||||| |||||||| | | | |||||||||||| || || ||
Sbjct 1674 CCATTCACCACCACCACCGGTACACTCTCCTCCCCCGCCAGTCCATTCACCACCACCTCC 1733
Query 1707 GGTACATTCTCCACCGCCACCAGTCCATTCACCTCCACCACCAGTTTATTCTCCACCGCC 1766
|| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1734 AGTCCATTCTCCACCGCCACCAGTCTATTCACCTCCACCACCAGTTTATTCTCCACCGCC 1793
Query 1767 ACCGCC-C--GTACATTCTCCTCCACCGCCAGtccattcaccaccgcctccagtccactc 1823
||| || | || ||||| || |||||||| || ||||| || || || |||||||| ||
Sbjct 1794 ACCACCACCAGTCCATTCACCACCACCGCCCGTACATTCTCCTCCTCCGCCAGTCCATTC 1853
Query 1824 tcctccaccaccagtctattctcc---accgccaccaccgccggtccattcaccacctcc 1880
|| || ||||||||| ||||||| ||||||||||||||| |||||||||||||||||
Sbjct 1854 ACCACCCCCACCAGTCCATTCTCCTCCACCGCCACCACCGCCAGTCCATTCACCACCTCC 1913
Query 1881 accagtgttctctccaccaccacctgtccactcccctccaccgccagtatattccccacc 1940
||| || | ||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1914 ACCGGTATACTCTCCACCACCACCTGTCCACTCCCCTCCACCACCTGTATATTCCCCACC 1973
Query 1941 accaccagtatattctccacctccgccgccagtaaagtcacc---accaccaccacca-- 1995
|||||||||| ||||||| || |||||||||||||| ||||| |||||||||||||
Sbjct 1974 ACCACCAGTACATTCTCCTCCACCGCCGCCAGTAAACTCACCTCCACCACCACCACCACC 2033
Query 1996 -gtctactctcctccacttttaccaccaaagatgagttcaccaccaACACAAACACCGGT 2054
|||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||
Sbjct 2034 AGTCTACTCTCCTCCACATTTACCGCCAAAAATGAGTTCACCACCAACACAAACACCGGT 2093
Query 2055 CAACTCTCCTCCACCACGAACACCCTCACAGACAGTAGAAGCACCACCGCCAAGTGAGGA 2114
||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||
Sbjct 2094 CAACTCTCCTCCACCACAAACACCAACACGGACAGTAGAAGCACCACCGCCAAGTGAGGA 2153
Query 2115 ATTCATCATTCCACCATTCATCGGCCACCAATATGCTTCACCACCACCTCCAATGTTCCA 2174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2154 ATTCATCATTCCACCATTCATCGGCCACCAATATGCTTCACCACCACCTCCAATGTTCCA 2213
Query 2175 AGGCTACTAA 2184
||||||||||
Sbjct 2214 AGGCTACTAA 2223
> Ahg491276 jgi|Araly1|491276|fgenesh2_kg.7__709__AT4G33970.1
Length=2058
Score = 876 bits (474), Expect = 0.0
Identities = 919/1130 (81%), Gaps = 45/1130 (4%)
Strand=Plus/Plus
Query 58 ACCGATGCAGAAGTTTCATTTATTGCACAGCGACAGCTCTTGACGTTACCTGAAAATGGT 117
|||||| |||||| | | || |||| |||||||||||||| || ||||| || || ||
Sbjct 136 ACCGATACAGAAGCTGCCTTCATTGTTCAGCGACAGCTCTTAACCTTACCAGACAACGGC 195
Query 118 GAACTTCCTGATGATATTGAGTATGAGGTTGATCTTAAGG-TGACATTTG-CAA-ACCAT 174
||||||||||||||||| || || ||||||||||| |||| | ||||||| ||| |||
Sbjct 196 GAACTTCCTGATGATATCGAATACGAGGTTGATCTCAAGGCT-ACATTTGCCAACACC-- 252
Query 175 AGGCTTAAGAGAGCGTATATTGCTCTCCAAGCCTGGAAAAAGGCGGTGTATTCAGACCCG 234
|||||||||||||| ||||| ||||| || || ||||||||||| | | |||||||||
Sbjct 253 AGGCTTAAGAGAGCTTATATAGCTCTTCAGGCTTGGAAAAAGGCCATATTTTCAGACCCA 312
Query 235 TTTAACACCACAGGAAACTGGCATGGCCCTCATGTGTGTGGCTATACGGGTGT-GTTCTG 293
||||||||||| || |||||||||||||| || ||||| |||| || ||||| ||| ||
Sbjct 313 TTTAACACCACGGGGAACTGGCATGGCCCGCACGTGTGCAGCTACACCGGTGTGGTT-TG 371
Query 294 TGCCCCGGCTCTTGATGA-TCCTGACGTCGCGGTTGTGGCGGGGGTTGATTTGAATGGTG 352
||| |||||||||||||| ||| || ||| | ||||| || || ||||| | || ||||
Sbjct 372 TGCGCCGGCTCTTGATGATTCC-GATGTCACAGTTGTAGCTGGTGTTGACCTCAACGGTG 430
Query 353 CGGATATCGCAGGGCATTTACCGGCTGAACTTGGTTTGATGACAGATGTTGCGATGTTTC 412
||||||||||||||||||| || ||||| |||||||||||||| |||||||| ||||| |
Sbjct 431 CGGATATCGCAGGGCATTTGCCTGCTGAGCTTGGTTTGATGACGGATGTTGCTATGTTCC 490
Query 413 ATTTGAATTCAAACCGGTTCTGTGGTATCATACCTAAGAG-TTTCGAGAAGTTG-AGCCT 470
||||||||||||||||||| || || ||||||||||| || ||| |||||| || || ||
Sbjct 491 ATTTGAATTCAAACCGGTTTTGCGGGATCATACCTAAAAGCTTT-GAGAAGCTGAAG-CT 548
Query 471 AATGCACGAGTTTGATGTCAGCAACAACCGGTTT-GTCGGACCTTTCCCTTCTGTTGTCC 529
||||||||| || ||||| || ||||||| |||| || |||||||||||| || ||||
Sbjct 549 AATGCACGAATTCGATGTTAGTAACAACC-GTTTCGTTGGACCTTTCCCTAAAGTCGTCC 607
Query 530 TCTCGTGGCCGGCTGTTAAGTTCATTGACGTCAGATACAATGATTTCGAAGGTCAAGTCC 589
| || ||||| ||| || | ||||||| | || | ||| |||||||||||||||||||
Sbjct 608 TTTCTTGGCCTAATGTCAAATACATTGACCTTAGGTTCAACGATTTCGAAGGTCAAGTCC 667
Query 590 CTCCTGAGCTTTTCAA-AAAGGATCTCGACGCCATTTTCCTGAACAACAACAGATTCACG 648
|||||||||||||||| |||| | || |||||||||||| ||||| |||| ||||||||
Sbjct 668 CTCCTGAGCTTTTCAAGAAAGAA-CTTGACGCCATTTTCTTGAACGACAATAGATTCACC 726
Query 649 TCTACCATTCCTGATTCCCTCGGAGAATCATCAG-CCTCCGTTGTGACCTTTGCTCACAA 707
|| |||||||| || || || ||||| || | |||| |||||||| |||||| ||||
Sbjct 727 TCGGTGATTCCTGAATCTCTAGGGGAATC-TCCGGCCTCGGTTGTGACTTTTGCTAACAA 785
Query 708 CAAATTTAGCGGTTGTATCCCTA-GAAGTATTGGAAACATGAAGAATCTCAACGAGATTA 766
||||| | ||| |||||||||| || |||| |||||||||||||||||||||||||||
Sbjct 786 TAAATTCACCGGATGTATCCCTAAGA-GTATCGGAAACATGAAGAATCTCAACGAGATTG 844
Query 767 TCTTTAAGGACAAC-AGTCTTGGC-GGTTGTTTCCCGTCAGAGATTGGGAAGCTAGCCAA 824
|||||| |||||| | | |||| ||||||||||| || || ||||||||| || | ||
Sbjct 845 TCTTTATGGACAATGA-T-TTGGGAGGTTGTTTCCCATCTGAAATTGGGAAGTTATCTAA 902
Query 825 TGTGAACGTGTTT--GACGCTAGCATGAACTCCTTCACT-GGT-GTTCTACCTCCAAGCT 880
||| |||| |||| || || |||| |||||| || | | ||| || || || | || |
Sbjct 903 TGT-AACG-GTTTTCGATGCAAGCAAGAACTCGTTTA-TAGGTCGT-CTCCCGACTAGTT 958
Query 881 TTGTCGGGCTTACC-AGTATGGAAGAGTTTGATATCTCTGGGAATAAACTCACCGGG-TT 938
|||||||| ||| | ||| |||| || ||||||||||| ||||| ||||||||||| ||
Sbjct 959 TTGTCGGG-TTAACGAGTGTGGAGGAATTTGATATCTCCGGGAACAAACTCACCGGACTT 1017
Query 939 CATACCAGAGAATATATGCAAGTTGCCTAAATTGGTTAACTTGACGTACGCCTACAATTA 998
|||| || || || ||||| |||||||| ||||| ||||| || ||| ||||||||||
Sbjct 1018 G-TACCGGATAACATTTGCAACTTGCCTAATTTGGTGAACTTCACTTACTCCTACAATTA 1076
Query 999 CTTCAACGGACAAGGTGATTCATGTGTTCCAGGTAGT---CAG-AAGCAGATTGCATTGG 1054
|||||| |||||||||| ||| |||||||||||| || | | ||| || |||||||||
Sbjct 1077 CTTCAATGGACAAGGTGGTTCGTGTGTTCCAGGTGGTGGTC-GCAAGGAGGTTGCATTGG 1135
Query 1055 ATGATACACGCAACTGCTTGCCAGATCGGCCTAAGCAACGATCGGCC-AAGGAATGTGCT 1113
| || ||||| || |||||||| | ||| ||| | |||||||| || ||| |||||||
Sbjct 1136 ACGACACACGTAATTGCTTGCCTGCTCGACCTGACCAACGATCCTCCCAAG-AATGTGCG 1194
Query 1114 GTGGTGATTAGCCGTCCAGTTGATTGTAGTAAGGACAAGTGTGCTGGTGG 1163
|| ||||| | ||| || ||||||||||| ||||| ||||| ||||||||
Sbjct 1195 GTTGTGATCAACCGCCCGGTTGATTGTAGCAAGGATAAGTGCGCTGGTGG 1244
> Ahg351872 jgi|Araly1|351872|fgenesh1_pg.C_scaffold_6002465
Length=630
Score = 662 bits (358), Expect = 0.0
Identities = 400/421 (95%), Gaps = 0/421 (0%)
Strand=Plus/Plus
Query 563 GATACAATGATTTCGAAGGTCAAGTCCCTCCTGAGCTTTTCAAAAAGGATCTCGACGCCA 622
|||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| ||||
Sbjct 167 GATACAATGACTTCGAAGGTCAGGTCCCTCCTGAGCTTTTCAAGAAGGATCTCGATGCCA 226
Query 623 TTTTCCTGAACAACAACAGATTCACGTCTACCATTCCTGATTCCCTCGGAGAATCATCAG 682
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 227 TTTTCTTGAACAACAACAGATTCACATCTACCATTCCTGATTCCCTCGGAGAATCCCCAG 286
Query 683 CCTCCGTTGTGACCTTTGCTCACAACAAATTTAGCGGTTGTATCCCTAGAAGTATTGGAA 742
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 287 CCTCCGTTGTGACCTTTGCTCACAACAAATTCAGCGGTTGTATCCCTAGAAGTATTGGAA 346
Query 743 ACATGAAGAATCTCAACGAGATTATCTTTAAGGACAACAGTCTTGGCGGTTGTTTCCCGT 802
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 347 ACATGAAGAATCTCAACGAGATTATCTTTAAGGACAACAGTCTTGGCGGTTGTTTCCCAT 406
Query 803 CAGAGATTGGGAAGCTAGCCAATGTGAACGTGTTTGACGCTAGCATGAACTCCTTCACTG 862
||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||| |
Sbjct 407 CAGAGATCGGGAAGCTAGCTAATGTGAACGTGTTTGACGCTAGCCTGAACTCCTTCACCG 466
Query 863 GTGTTCTACCTCCAAGCTTTGTCGGGCTTACCAGTATGGAAGAGTTTGATATCTCTGGGA 922
|||||||||| |||||||||||||||||||||||| | |||| |||||||||||||||||
Sbjct 467 GTGTTCTACCCCCAAGCTTTGTCGGGCTTACCAGTTTAGAAGTGTTTGATATCTCTGGGA 526
Query 923 ATAAACTCACCGGGTTCATACCAGAGAATATATGCAAGTTGCCTAAATTGGTTAACTTGA 982
|||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 527 ATAAACTCACTGGGTTCATGCCAGAGAATATCTGCAAGTTGCCTAAATTGGTTAACTTGA 586
Query 983 C 983
|
Sbjct 587 C 587
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82198748710
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5