BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G16832.1
Length=1059
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481664 jgi|Araly1|481664|fgenesh2_kg.4__724__AT2G17460.1 472 3e-132
Ahg479985 jgi|Araly1|479985|fgenesh2_kg.3__2686__AT2G17460.1 455 3e-127
Ahg473700 jgi|Araly1|473700|fgenesh2_kg.1__3654__AT1G32505.1 446 2e-124
Ahg497174 jgi|Araly1|497174|fgenesh2_kg.26__9__AT2G17460.1 444 7e-124
Ahg481538 jgi|Araly1|481538|fgenesh2_kg.4__598__AT2G17460.1 444 7e-124
Ahg473336 jgi|Araly1|473336|fgenesh2_kg.1__3290__AT2G17460.1 444 7e-124
Ahg484914 jgi|Araly1|484914|fgenesh2_kg.5__906__AT2G17460.1 433 2e-120
> Ahg481664 jgi|Araly1|481664|fgenesh2_kg.4__724__AT2G17460.1
Length=909
Score = 472 bits (255), Expect = 3e-132
Identities = 430/509 (84%), Gaps = 33/509 (6%)
Strand=Plus/Minus
Query 174 CAATCTC-ATAATTAGTTAATGGATACCGGGAGAGATGTTAGTGATGATAGATACTAAAC 232
||||| | ||||||||||| ||||| |||||| |||||| |||||||||||| | |||||
Sbjct 909 CAATC-CAATAATTAGTTACTGGATGCCGGGAAAGATGTCAGTGATGATAGAAAGTAAAC 851
Query 233 GCCCTCCTGTCTACATTGACAGTCAAGTGAGGGTGGGATACGAttttttttATTCGTGGT 292
|||||||||| |||||||||| |||| | | | | | ||||| |||||||||
Sbjct 850 GCCCTCCTGTATACATTGACAATCAA---A---T--G--A-G---TTTTTGATTCGTGGT 805
Query 293 GGGTATCCTTCTCTCAATTTGTTTGTCTCTTTCATTACAACCGTCAAGACACTCGGGAAT 352
||| ||||| | ||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 804 GGGGATCCTAGTGTCACCTTGTTTGTCTCTTTCATTACAACCGTCAAGGCACTCGGGAAT 745
Query 353 AATGTCTCTAGGACTC-ATGGTGACGATGCTGAAAGTGACCGTGTGTGTGATAGTGTTTT 411
| |||| ||||||| | ||||||| || | | | |||||||||||| |||||||
Sbjct 744 ACTGTCCCTAGGAC-CGATGGTGA-GA-G-T-----T-ACCGTGTGTGTGGGAGTGTTTC 695
Query 412 AAATGTTGATGAAAATAATGAGGCCGTAGATTAGCAAGACGACATTGAAGACGATAAAAC 471
|||||| |||| |||||||||||| |||||| ||||||||||| ||||||||||||||||
Sbjct 694 AAATGTAGATGGAAATAATGAGGCTGTAGATGAGCAAGACGACGTTGAAGACGATAAAAC 635
Query 472 AGATGAGGATGAAGTTG-GG-GG-G-ACAACGAAGATGGTGATGGGTATGATGATTATCA 527
|||||||||||||| | || || | ||||||||||||||| ||||||||||||||||||
Sbjct 634 AGATGAGGATGAAGAAGAGGAGGAGGACAACGAAGATGGTGCTGGGTATGATGATTATCA 575
Query 528 GTGTGACGATGGATCTATGGGGG-AAGTACCATCGATCCTACTATTGATGGTAGTGAAAG 586
| |||| |||||||||||||||| ||||||| ||||||||||||| || ||||||||| |
Sbjct 574 GGGTGATGATGGATCTATGGGGGGAAGTACCCTCGATCCTACTATAGACGGTAGTGAAGG 515
Query 587 TAGTGGCAAAGAT-ATGATTACAAGAAGTGGAGCGATGAAATTGTAGAAGAATATGGAAT 645
|||||| ||||| | |||||||| ||||||| |||| |||| | ||||||||||||||
Sbjct 514 CAGTGGCGAAGATTACGATTACAACAAGTGGAACGATTTAATTATTGAAGAATATGGAAT 455
Query 646 AGGGAATGTTGAGGAGAACGTCATTCTCA 674
||| |||||||||||| ||||||||||||
Sbjct 454 AGGAAATGTTGAGGAGGACGTCATTCTCA 426
Score = 460 bits (249), Expect = 7e-129
Identities = 282/298 (95%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 750 CTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGCTGTGACTCCAAGAAGTA 809
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||
Sbjct 297 CTGGCGGAGATAACATTTCTCATTCGGGTGACCGTACACCAACGGTGACTCCAAGACGTA 238
Query 810 TGTGTCAACATGGTTTGTACCAATGTACGTACACTATAGATTGGAGAGTGTTTTTAAGAA 869
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 237 CGTGTCAACATGGTTTGTACCAATGTACGTACACTATAGATTGGAGAGTGTTTTTAAGAA 178
Query 870 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAAT-CTTTTTGCTACA 928
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 177 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAATGCTTTT-GCTACA 119
Query 929 AGCAACCTAGGTCATATCCTACAAGATTGGTGATGGTATGCGTTGATGATACTTGTCCAT 988
|||||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 118 AGCAACGTAGGTCATGTCCTACAAGATTGGAGATGGTCTGCGTTGATGATACTTGTCCAT 59
Query 989 GACATTTGACTGCTCATGTCGTCAAGAATTCAGAATGTTTCAAAATCACATCGTATGA 1046
| |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 58 GGCATTTGACAGCTCAAGTTGTCAAGAATTCAGAATGTTTCAAAATCACATCGTATGA 1
Score = 84.2 bits (45), Expect = 2e-15
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 787 ACCAGCTGTGACTCCAAGAAGTATGTGTCAACATGGTTTGTACCAATGTACGTACAC 843
|||| | |||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 425 ACCAACGGTGACTCCAAGACGTACGTGTCAACATGGTTTGTACCAATGTACGTACAC 369
> Ahg479985 jgi|Araly1|479985|fgenesh2_kg.3__2686__AT2G17460.1
Length=904
Score = 455 bits (246), Expect = 3e-127
Identities = 281/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 750 CTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGCTGTGACTCCAAGAAGTA 809
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||
Sbjct 297 CTGGCGGAGATAACATTTCTCATTCGGGTGACCGTACACCAACGGTGACTCCAAGACGTA 238
Query 810 TGTGTCAACATGGTTTGTACCAATGTACGTACACTATAGATTGGAGAGTGTTTTTAAGAA 869
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 237 CGTGTCAACATGGTTTGTACCAATGTACGTACACTACAGATTGGAGAGTGTTTTTAAGAA 178
Query 870 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAAT-CTTTTTGCTACA 928
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 177 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAATGCTTTT-GCTACA 119
Query 929 AGCAACCTAGGTCATATCCTACAAGATTGGTGATGGTATGCGTTGATGATACTTGTCCAT 988
|||||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 118 AGCAACGTAGGTCATGTCCTACAAGATTGGAGATGGTCTGCGTTGATGATACTTGTCCAT 59
Query 989 GACATTTGACTGCTCATGTCGTCAAGAATTCAGAATGTTTCAAAATCACATCGTATGA 1046
| |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 58 GGCATTTGACAGCTCAAGTTGTCAAGAATTCAGAATGTTTCAAAATCACATCGTATGA 1
Score = 274 bits (148), Expect = 1e-72
Identities = 325/402 (81%), Gaps = 46/402 (11%)
Strand=Plus/Minus
Query 174 CAATCTC-ATAATTAGTTAATGGATACCGGGAGAGATGTTAGTGATGATAGATACTAAAC 232
||||| | ||||||||||| ||||| |||||| |||||| |||||||||||| | |||||
Sbjct 904 CAATC-CAATAATTAGTTACTGGATGCCGGGAAAGATGTCAGTGATGATAGAAAGTAAAC 846
Query 233 GCCCTCCTGTCTACATTGACAGTCAAGTGAGGGTGGGATACGAttttttttATTCGTGGT 292
|||||||||| |||||||||| || | | || || ||||| |||||||||
Sbjct 845 GCCCTCCTGTATACATTGACAATC-A---A-------AT--GA--TTTTTCATTCGTGGT 801
Query 293 GGGTATCCTTCTCTCAATTTGTTTGTCTCTTTCATTACAACCGTCAAGACACTCGGGAAT 352
||| ||||| | ||| ||||||||||| | || | | ||| |||||||||||
Sbjct 800 GGGGATCCTAGTGTCACCTTGTTTGTCTC--T--TT-C-A-----AAG-CACTCGGGAAT 753
Query 353 AATGTCTCTAGGACTC-ATGGTGACGATGCTGAAAGTGACCGTGTGTGTGATAGTGTTTT 411
| |||| ||||||| | ||||||| || | | | |||||||||||| |||| ||
Sbjct 752 ACTGTCCCTAGGAC-CGATGGTGA-GA-G-T-----T-ACCGTGTGTGTGGGAGTGCTTC 703
Query 412 AAATGTTGATGAAAATAATGAGGCCGTAGATTAGCAAGACGACATTGAAGACGATAAAAC 471
|||||| |||| ||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 702 AAATGTAGATGGAAATAATGAGGCCGTAGATGAGCAAGACGACGTTGAAGACGATAAAAC 643
Query 472 AGATGAGGATGAAGTTG-GG-GG-G-ACAACGAAGATGGTGATGGGTATGATGATTATCA 527
|||||||||||||| | || || | ||||||||||||||| ||||||||||||||||||
Sbjct 642 AGATGAGGATGAAGAAGAGGAGGAGGACAACGAAGATGGTGCTGGGTATGATGATTATCA 583
Query 528 GTGTGACGATGGATCTATGGGGG--AAGTACCATCGATCCTA 567
| |||| |||||||||||||||| ||||||| |||||||||
Sbjct 582 GGGTGATGATGGATCTATGGGGGGGAAGTACCCTCGATCCTA 541
Score = 111 bits (60), Expect = 8e-24
Identities = 97/113 (86%), Gaps = 9/113 (8%)
Strand=Plus/Minus
Query 730 GTACACAAGTCAACGTGTACCTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACC 789
|||||||||||| ||||||||||| |||||| | | || ||| ||||||||||||
Sbjct 473 GTACACAAGTCATCGTGTACCTGGGGGAGAT-A-A---CT----CGGTTGACCGTACACC 423
Query 790 AGCTGTGACTCCAAGAAGTATGTGTCAACATGGTTTGTACCAATGTACGTACA 842
| | |||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 422 AACGGTGACTCCAAGACGTACGTGTCAACATGGTTTGTACCAATGTACGTACA 370
Score = 86.1 bits (46), Expect = 5e-16
Identities = 58/64 (91%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 611 AAGTGGAGCGATGAAATTGTAGAAGAATATGGAATAGGGAATGTTGAGGAGAACGTCATT 670
||||||| |||| |||| | |||||||||||||||||||||||||||||| ||||||||
Sbjct 537 AAGTGGAACGATTTAATTATTGAAGAATATGGAATAGGGAATGTTGAGGAGGACGTCATT 478
Query 671 CTCA 674
||||
Sbjct 477 CTCA 474
> Ahg473700 jgi|Araly1|473700|fgenesh2_kg.1__3654__AT1G32505.1
Length=450
Score = 446 bits (241), Expect = 2e-124
Identities = 334/379 (88%), Gaps = 5/379 (1%)
Strand=Plus/Minus
Query 336 TCAAGACACTCGGGAATAATGTCTCTAGGACTCATGGTGACGATGCTGAAAGTGACCGTG 395
||||| ||||| ||||||||| | |||||||| |||||||||||||||||||||||||||
Sbjct 450 TCAAGGCACTCTGGAATAATGACCCTAGGACTGATGGTGACGATGCTGAAAGTGACCGTG 391
Query 396 TGTGTGATAGTGTTTTAAATGTTGATGAAAATAATGAGGCCGTAGATTAGCAAGACGACA 455
|||||| |||| || |||||| |||| ||||||||||||||||||| | ||| |||||
Sbjct 390 TGTGTGGGAGTGCTTCAAATGTGGATGCAAATAATGAGGCCGTAGATGAACAACACGACG 331
Query 456 TTGAAGACGATAAAACAGATGAGGATGAAGTTGG-GG-GGACAACGAAGATGGTGATGGG 513
| |||| ||||||||||||||||||||| || || ||||| ||||||||||||||||
Sbjct 330 TACAAGATGATAAAACAGATGAGGATGAA-AAGGAGGAGGACACCGAAGATGGTGATGGG 272
Query 514 TATGATGATTATCAGTGTGACGATGGATCTATGGGG-GAAGTACCATCGATCCTACTATT 572
||||||||||||||| |||||||||||||||||||| |||||||| |||||| ||||||
Sbjct 271 TATGATGATTATCAGGGTGACGATGGATCTATGGGGAGAAGTACCCTCGATCATACTATA 212
Query 573 GATGGTAGTGAAAGTAGTGGCAAAGA-TATGATTACAAGAAGTGGAGCGATGAAATTGTA 631
|| | ||||||| |||||||| |||| || |||||||| ||||||| ||||| |||||||
Sbjct 211 GACGATAGTGAATGTAGTGGCGAAGATTACGATTACAACAAGTGGAACGATGTAATTGTA 152
Query 632 GAAGAATATGGAATAGGGAATGTTGAGGAGAACGTCATTCTCACACAGCTGACTGTTCAA 691
|||||||||||||||||||||||||||||| ||||||||||||| || | || ||||||
Sbjct 151 GAAGAATATGGAATAGGGAATGTTGAGGAGGACGTCATTCTCACTCAACAAACGGTTCAA 92
Query 692 CATCCAAGGGAATTCAGTC 710
|||||| ||||||||||||
Sbjct 91 CATCCAGGGGAATTCAGTC 73
> Ahg497174 jgi|Araly1|497174|fgenesh2_kg.26__9__AT2G17460.1
Length=842
Score = 444 bits (240), Expect = 7e-124
Identities = 279/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 750 CTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGCTGTGACTCCAAGAAGTA 809
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||
Sbjct 297 CTGGCGGAGATAACATTTCTCATTCGGGTGACCGTACACCAACGGTGACTCCAAGACGTA 238
Query 810 TGTGTCAACATGGTTTGTACCAATGTACGTACACTATAGATTGGAGAGTGTTTTTAAGAA 869
||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 237 CGTGTCAACATGGTTTGTACCAATGTACATACACTACAGATTGGAGAGTGTTTTTAAGAA 178
Query 870 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAAT-CTTTTTGCTACA 928
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 177 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAATGCTTTT-GCTACA 119
Query 929 AGCAACCTAGGTCATATCCTACAAGATTGGTGATGGTATGCGTTGATGATACTTGTCCAT 988
|||||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 118 AGCAACATAGGTCATGTCCTACAAGATTGGAGATGGTCTGCGTTGATGATACTTGTCCAT 59
Query 989 GACATTTGACTGCTCATGTCGTCAAGAATTCAGAATGTTTCAAAATCACATCGTATGA 1046
| |||||||| ||||| || ||||| ||||||||||||||||||||||||||||||||
Sbjct 58 GGCATTTGACAGCTCAAGTTGTCAACAATTCAGAATGTTTCAAAATCACATCGTATGA 1
Score = 346 bits (187), Expect = 2e-94
Identities = 333/398 (84%), Gaps = 32/398 (8%)
Strand=Plus/Minus
Query 174 CAATCTC-ATAATTAGTTAATGGATACCGGGAGAGATGTTAGTGATGATAGATACTAAAC 232
||||| | ||||||||||| ||||| |||||| |||||| |||||||||||| | ||||
Sbjct 842 CAATC-CAATAATTAGTTACTGGATGCCGGGAAAGATGTCAGTGATGATAGAAAGTAAAT 784
Query 233 GCCCTCCTGTCTACATTGACAGTCAAGTGAGGGTGGGATACGAttttttttATTCGTGGT 292
|||||||||| |||||||||| |||| | | | | | ||||| |||||||||
Sbjct 783 GCCCTCCTGTATACATTGACAATCAA---A---T--G--A-G---TTTTTGATTCGTGGT 738
Query 293 GGGTATCCTTCTCTCAATTTGTTTGTCTCTTTCATTACAACCGTCAAGACACTCGGGAAT 352
||| ||||| | ||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 737 GGGGATCCTAGTGTCACCTTGTTTGTCTCTTTCATTACAACCGTCAAGGCACTCGGGAAT 678
Query 353 AATGTCTCTAGGACTC-ATGGTGACGATGCTGAAAGTGACCGTGTGTGTGATAGTGTTTT 411
| |||| ||||||| | ||||||| || | | | |||||||||||| |||| ||
Sbjct 677 ACTGTCCCTAGGAC-CGATGGTGA-GA-G-T-----T-ACCGTGTGTGTGGGAGTGCTTC 628
Query 412 AAATGTTGATGAAAATAATGAGGCCGTAGATTAGCAAGACGACATTGAAGACGATAAAAC 471
|||||| |||| ||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 627 AAATGTAGATGGAAATAATGAGGCCGTAGATGAGCAAGACGACGTTGAAGACGATAAAAC 568
Query 472 AGATGAGGATGAAGTTG-GG-GG-G-ACAACGAAGATGGTGATGGGTATGATGATTATCA 527
|||||||||||||| | || || | ||||||||||||||| ||||||||||||||||||
Sbjct 567 AGATGAGGATGAAGAAGAGGAGGAGGACAACGAAGATGGTGCTGGGTATGATGATTATCA 508
Query 528 GTGTGACGATGGATCTATGGGGG-AAGTACCATCGATC 564
| |||| |||||||||||||||| ||||||| ||||||
Sbjct 507 GGGTGATGATGGATCTATGGGGGGAAGTACCCTCGATC 470
Score = 100 bits (54), Expect = 2e-20
Identities = 93/110 (85%), Gaps = 9/110 (8%)
Strand=Plus/Minus
Query 733 CACAAGTCAACGTGTACCTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGC 792
||||||||| ||||||| ||| |||||| | | || ||| ||||||||||||| |
Sbjct 470 CACAAGTCATCGTGTACGTGGGGGAGAT-A-A---CT----CGGTTGACCGTACACCAAC 420
Query 793 TGTGACTCCAAGAAGTATGTGTCAACATGGTTTGTACCAATGTACGTACA 842
|||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 419 GGTGACTCCAAGACGTACGTGTCAACATGGTTTGTACCAATGTACGTACA 370
> Ahg481538 jgi|Araly1|481538|fgenesh2_kg.4__598__AT2G17460.1
Length=829
Score = 444 bits (240), Expect = 7e-124
Identities = 279/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 750 CTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGCTGTGACTCCAAGAAGTA 809
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||
Sbjct 297 CTGGCGGAGATAACATTTCTCATTCGGGTGACCGTACACCAACGGTGACTCCAAGACGTA 238
Query 810 TGTGTCAACATGGTTTGTACCAATGTACGTACACTATAGATTGGAGAGTGTTTTTAAGAA 869
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 237 CGTGTCAACATGGTTTGTACCAATGTACGTACACTACAGATTGGAGAGTGTTTTTAAGAA 178
Query 870 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAAT-CTTTTTGCTACA 928
|||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||
Sbjct 177 CAGAAAAGTCATACAACAAATAATGTCTTATCTCGCAATCAAACAATGCTTTT-GCTACA 119
Query 929 AGCAACCTAGGTCATATCCTACAAGATTGGTGATGGTATGCGTTGATGATACTTGTCCAT 988
|||||| |||||||| ||||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 118 AGCAACGTAGGTCATGTCCTAAAAGATTGGAGATGGTCTGCGTTGATGATACTTGTCCAT 59
Query 989 GACATTTGACTGCTCATGTCGTCAAGAATTCAGAATGTTTCAAAATCACATCGTATGA 1046
| |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 58 GGCATTTGACAGCTCAAGTTGTCAAGAATTCAGAATGTTTCAAAATCACATCGTATGA 1
Score = 267 bits (144), Expect = 2e-70
Identities = 321/398 (81%), Gaps = 45/398 (11%)
Strand=Plus/Minus
Query 174 CAATCTC-ATAATTAGTTAATGGATACCGGGAGAGATGTTAGTGATGATAGATACTAAAC 232
||||| | ||||||||||| ||||| |||||| |||||| |||||||||||| | |||||
Sbjct 829 CAATC-CAATAATTAGTTACTGGATGCCGGGAAAGATGTCAGTGATGATAGAAAGTAAAC 771
Query 233 GCCCTCCTGTCTACATTGACAGTCAAGTGAGGGTGGGATACGAttttttttATTCGTGGT 292
|||||||||| |||||||||| || | | || || ||||| |||||||||
Sbjct 770 GCCCTCCTGTATACATTGACAATC-A---A-------AT--GA--TTTTTGATTCGTGGT 726
Query 293 GGGTATCCTTCTCTCAATTTGTTTGTCTCTTTCATTACAACCGTCAAGACACTCGGGAAT 352
||| ||||| | ||| ||||||||||| | || ||| | | |||||||||||
Sbjct 725 GGGGATCCTAGTGTCACCTTGTTTGTCTC--T--TT-CAA--G----G-CACTCGGGAAT 678
Query 353 AATGTCTCTAGGACTC-ATGGTGACGATGCTGAAAGTGACCGTGTGTGTGATAGTGTTTT 411
| |||| ||||||| | ||||||| || | | | |||||||||||| |||| ||
Sbjct 677 ACTGTCCCTAGGAC-CGATGGTGA-GA-G-T-----T-ACCGTGTGTGTGGGAGTGCTTC 628
Query 412 AAATGTTGATGAAAATAATGAGGCCGTAGATTAGCAAGACGACATTGAAGACGATAAAAC 471
|||||| |||| ||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 627 AAATGTAGATGGAAATAATGAGGCCGTAGATGAGCAAGACGACGTTGAAGACGATAAAAC 568
Query 472 AGATGAGGATGAAGTTG-GG-GG-G-ACAACGAAGATGGTGATGGGTATGATGATTATCA 527
|||||||||||||| | || || | | ||||||||||||| ||||||||||||||||||
Sbjct 567 AGATGAGGATGAAGAAGAGGAGGAGGAAAACGAAGATGGTGCTGGGTATGATGATTATCA 508
Query 528 GTGTGACGATGGATCTATGGGGG-AAGTACCATCGATC 564
| |||| |||||||||||||||| ||||||| ||||||
Sbjct 507 GGGTGATGATGGATCTATGGGGGGAAGTACCCTCGATC 470
Score = 102 bits (55), Expect = 5e-21
Identities = 94/111 (85%), Gaps = 9/111 (8%)
Strand=Plus/Minus
Query 733 CACAAGTCAACGTGTACCTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGC 792
||||||||| ||||||| ||| |||||| | | || ||| ||||||||||||| |
Sbjct 470 CACAAGTCATCGTGTACGTGGGGGAGAT-A-A---CT----CGGTTGACCGTACACCAAC 420
Query 793 TGTGACTCCAAGAAGTATGTGTCAACATGGTTTGTACCAATGTACGTACAC 843
|||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 419 GGTGACTCCAAGACGTACGTGTCAACATGGTTTGTACCAATGTACGTACAC 369
> Ahg473336 jgi|Araly1|473336|fgenesh2_kg.1__3290__AT2G17460.1
Length=829
Score = 444 bits (240), Expect = 7e-124
Identities = 279/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 750 CTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGCTGTGACTCCAAGAAGTA 809
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||
Sbjct 297 CTGGCGGAGATAACATTTCTCATTCGGGTGACCGTACACCAACGGTGACTCCAAGACGTA 238
Query 810 TGTGTCAACATGGTTTGTACCAATGTACGTACACTATAGATTGGAGAGTGTTTTTAAGAA 869
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 237 CGTGTCAACATGGTTTGTACCAATGTACGTACACTACAGATTGGAGAGTGTTTTTAAGAA 178
Query 870 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAAT-CTTTTTGCTACA 928
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 177 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAATGCTTTT-GCTACA 119
Query 929 AGCAACCTAGGTCATATCCTACAAGATTGGTGATGGTATGCGTTGATGATACTTGTCCAT 988
|||||| |||||||| ||||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 118 AGCAACGTAGGTCATGTCCTAAAAGATTGGAGATGGTCTGCGTTGATGATACTTGTCCAT 59
Query 989 GACATTTGACTGCTCATGTCGTCAAGAATTCAGAATGTTTCAAAATCACATCGTATGA 1046
| |||||||| ||||| || |||||||||||||||| |||||||||||||||||||||
Sbjct 58 GGCATTTGACAGCTCAAGTTGTCAAGAATTCAGAATATTTCAAAATCACATCGTATGA 1
Score = 102 bits (55), Expect = 5e-21
Identities = 94/111 (85%), Gaps = 9/111 (8%)
Strand=Plus/Minus
Query 733 CACAAGTCAACGTGTACCTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGC 792
||||||||| ||||||| ||| |||||| | | || ||| ||||||||||||| |
Sbjct 470 CACAAGTCATCGTGTACGTGGGGGAGAT-A-A---CT----CGGTTGACCGTACACCAAC 420
Query 793 TGTGACTCCAAGAAGTATGTGTCAACATGGTTTGTACCAATGTACGTACAC 843
|||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 419 GGTGACTCCAAGACGTACGTGTCAACATGGTTTGTACCAATGTACGTACAC 369
> Ahg484914 jgi|Araly1|484914|fgenesh2_kg.5__906__AT2G17460.1
Length=878
Score = 433 bits (234), Expect = 2e-120
Identities = 277/298 (93%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 750 CTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGCTGTGACTCCAAGAAGTA 809
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||
Sbjct 297 CTGGCGGAGATAACATTTCTCATTCGGGTGACCGTACACCAACCGTGACTCCAAGACGTA 238
Query 810 TGTGTCAACATGGTTTGTACCAATGTACGTACACTATAGATTGGAGAGTGTTTTTAAGAA 869
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 237 CGTGTCAACATGGTTTGTACCAATGTACGTACACTACAGATTGGAGAGTGTTTTTAAGAG 178
Query 870 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAAT-CTTTTTGCTACA 928
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 177 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAATGCTTTT-GCTACA 119
Query 929 AGCAACCTAGGTCATATCCTACAAGATTGGTGATGGTATGCGTTGATGATACTTGTCCAT 988
|||||| |||||||| |||||||||||||| |||||| ||||||||||||| || |||||
Sbjct 118 AGCAACGTAGGTCATGTCCTACAAGATTGGAGATGGTCTGCGTTGATGATATTTTTCCAT 59
Query 989 GACATTTGACTGCTCATGTCGTCAAGAATTCAGAATGTTTCAAAATCACATCGTATGA 1046
| |||||||| ||||| || |||||||||||| |||||||||||||||||||||||||
Sbjct 58 GGCATTTGACAGCTCAAGTTGTCAAGAATTCATAATGTTTCAAAATCACATCGTATGA 1
Score = 351 bits (190), Expect = 4e-96
Identities = 335/399 (84%), Gaps = 34/399 (9%)
Strand=Plus/Minus
Query 174 CAATCTC-ATAATTAGTTAATGGATACCGGGAGAGATGTTAGTGATGATAGATACTAAAC 232
||||| | ||||||||||| ||||| |||||| |||||| |||||||||||| | |||||
Sbjct 878 CAATC-CAATAATTAGTTACTGGATGCCGGGAAAGATGTCAGTGATGATAGAAAGTAAAC 820
Query 233 GCCCTCCTGTCTACATTGACAGTCAAGTGAGGGTGGGATACGAttttttttATTCGTGGT 292
||||||||||||||||||||| |||| | | | | | ||||| |||||||||
Sbjct 819 GCCCTCCTGTCTACATTGACAATCAA---A---T--G--A-G---TTTTTGATTCGTGGT 774
Query 293 GGGTATCCTTCTCTCAATTTGTTTGTCTCTTTCATTACAACCGTCAAGACACTCGGGAAT 352
||| ||||| | ||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 773 GGGGATCCTAGTGTCACCTTGTTTGTCTCTTTCATTACAACCGTCAAGGCACTCGGGAAT 714
Query 353 AATGTCTCTAGGACTC-ATGGTGACGATGCTGAAAGTGACCGTGTGTG-TGATAGTGTTT 410
| |||| ||||||| | ||||||| || | | | |||||||||| || |||| ||
Sbjct 713 ACTGTCCCTAGGAC-CGATGGTGA-GA-G-T-----T-ACCGTGTGTGTTG-GAGTGCTT 665
Query 411 TAAATGTTGATGAAAATAATGAGGCCGTAGATTAGCAAGACGACATTGAAGACGATAAAA 470
|||||| |||| ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 664 CAAATGTAGATGGAAATAATGAGGCCGTAGATGAGCAAGACGACGTTGAAGACGATAAAA 605
Query 471 CAGATGAGGATGAAGTTG-GG-GG-G-ACAACGAAGATGGTGATGGGTATGATGATTATC 526
||||||||||||||| | || || | ||||||||||||||| |||||||||||||||||
Sbjct 604 CAGATGAGGATGAAGAAGAGGAGGAGGACAACGAAGATGGTGCTGGGTATGATGATTATC 545
Query 527 AGTGTGACGATGGATCTATGGGGG-AAGTACCATCGATC 564
|| |||| |||||||||||||||| ||||||| ||||||
Sbjct 544 AGGGTGATGATGGATCTATGGGGGGAAGTACCCTCGATC 506
Score = 102 bits (55), Expect = 5e-21
Identities = 94/111 (85%), Gaps = 9/111 (8%)
Strand=Plus/Minus
Query 733 CACAAGTCAACGTGTACCTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGC 792
||||||||| ||||||| ||| |||||| | | || ||| ||||||||||||| |
Sbjct 506 CACAAGTCATCGTGTACGTGGGGGAGAT-A-A---CT----CGGTTGACCGTACACCAAC 456
Query 793 TGTGACTCCAAGAAGTATGTGTCAACATGGTTTGTACCAATGTACGTACAC 843
|||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 455 GGTGACTCCAAGACGTACGTGTCAACATGGTTTGTACCAATGTACGTACAC 405
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 39419096178
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5