BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G16890.2
Length=1645
Score E
Sequences producing significant alignments: (Bits) Value
Ahg480568 jgi|Araly1|480568|fgenesh2_kg.3__3269__AT2G16890.2 2222 0.0
Ahg906507 jgi|Araly1|906507|Al_scaffold_0003_3635 1943 0.0
Ahg350625 jgi|Araly1|350625|fgenesh1_pg.C_scaffold_6001218 1003 0.0
> Ahg480568 jgi|Araly1|480568|fgenesh2_kg.3__3269__AT2G16890.2
Length=1637
Score = 2222 bits (1203), Expect = 0.0
Identities = 1518/1664 (91%), Gaps = 46/1664 (3%)
Strand=Plus/Plus
Query 1 ATCGTGAGAACTAAGAAACACCCAAGAAAACAAACAAACT---TTTTAAAA-AATGTCCG 56
||||||||||||||||||||||||||||||||| |||||| ||||| |||| | |
Sbjct 1 ATCGTGAGAACTAAGAAACACCCAAGAAAACAAGCAAACTAAAAAATAAAATAATGGCAG 60
Query 57 TTTCAACACATCACCACCACGTGGTCCTCTTCCCTTTCATGTCAAAAGGCCACATCATCC 116
||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 61 TTTCAACACAT---CATCACGTGGTCCTCTTCCCTTACATGTCAAAAGGCCACATCATCC 117
Query 117 CTCTCCTCCAATTCGGTCGTCTCCTCCTCCGTCACCACCGCAAAGAACCAACCA------ 170
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 118 CCCTCCTCCAATTCGGTCGTCTCCTCCTCCGTCACCACCGCAAAGAACCAACCATCTCCT 177
Query 171 TCACCGTCACCGTTTTCACCACTCCCAAGAACCAACCTTTCATCTCAGACTTCCTCTCGG 230
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 178 TCACCGTCACCGTCTTCACCACTCCTAAGAACCAACCTTTCATCTCAGACTTCCTCTCGG 237
Query 231 ATACGCCGGAGATCAAAGTCATCTCTCTCCCTTTCCCGGAAAACATCACCGGAATCCCTC 290
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 238 ACACGCCGGAGATCAAAGTCATTTCTCTCCCTTTCCCGGAAAACATCACCGGAATCCCTC 297
Query 291 CCGGCGTCGAGAACACCGAAAAGCTCCCATCCATGTCACTTTTCGTCCCCTTCACACGCG 350
|||||||||||| |||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct 298 CCGGCGTCGAGAGCACCGACAAGCTCCCTTCCATGTCACTTTTCGTTCCCTTCACACGCG 357
Query 351 CCACGAAGCTTCTCCAACCTTTCTTCGAAGAAACACTCAAGACTCTTCCAAAAGTTTCGT 410
|||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| |
Sbjct 358 CCACGAAGCTTCTCCAACCTTTCTTCGAGGAAACACTCAAGAATCTTCCTCAAGTTTCTT 417
Query 411 TCATGGTCTCTGATGGATTCCTCTGGTGGACATCGGAGTCTGCAGCTAAGTTCAACATTC 470
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 418 TCATGGTCTCCGATGGATTCCTCTGGTGGACATCGGAATCTGCAGCTAAGTTCAAGATTC 477
Query 471 CAAGATTTGTCTCCTACGGCATGAACTCTTACTCCGCCGCTGTCTCCATCTCTGTTTTCA 530
| || || |||| ||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct 478 CTAGGTTGGTCTTCTACGGCATGAACTCTTACTCTGCCGCTATCTCCATCTCTGTTTTCA 537
Query 531 AACACGAACTCTTTACCGAACCGGAAAGTAAATCTGATACCGAACCGGTCACTGTACCAG 590
||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 538 AACACAAACTCTTTACCGAACCGGAAACTAAATCTGATACCGAACCGGTCACTGTACCGG 597
Query 591 ACTTTCCATGGAT-CAAGGTCAAGAAGTGTGATTTCGACCATGGCACTACCGAGCCGGAA 649
||||||||||||| | | || ||||||||||||||||||||||| |||||||| || ||
Sbjct 598 ACTTTCCATGGATCCGA-GTTAAGAAGTGTGATTTCGACCATGGTACTACCGATCCCAAA 656
Query 650 GAATCAGGTGCAGCCCTCGAACTATCTATGGACCAAATCAAGTCGACCACCACAAGCCAT 709
||||||||||||||| | ||| |||||||||||||||||| ||||| || |||||||||
Sbjct 657 GAATCAGGTGCAGCCTTAGAATTATCTATGGACCAAATCATGTCGAACAATACAAGCCAT 716
Query 710 GGGTTTTTAGTCAATAGCTTCTACGAGCTCGAGTCAGCATTTGTTGATTACAACAACAAC 769
|||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||
Sbjct 717 GGGTTTTTAGTCAATAGCTTCTACGAGCTCGAATCAACATTTGTTGATTATAACAACAAC 776
Query 770 TCTGGTGATAAACCAAAGTCGTGGTGTGTTGGGCCACTGTGTTTGACAGATCCTCCTAAA 829
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 TCTGATGATAGACCAAAGTCGTGGTGTGTTGGGCCACTGTGTTTGACAGATCCTCCTAAA 836
Query 830 CAGGGGAGTGCTAAACCGGCTTGGATTCATTGGTTGGATCAGAAGCGAGAGGAAGGGCGT 889
| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 837 CCGGGGAGGGCTAAACCGGCTTGGATTCATTGGTTGGATCGGAAGCGAGAGGAAGGGCGT 896
Query 890 CCGGTTTTGTACGTGGCGTTTGGAACGCAGGCAGAGATATCGAACAAGCAGCTTATGGAA 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 CCGGTTTTGTACGTGGCGTTTGGAACGCAGGCAGAGATATCGAACAAGCAGCTTATGGAA 956
Query 950 CTAGCTTTCGGCTTGGAAGATTCAAAGGTGAACTTTCTGTGGGTCACAAGAAAAGATGTG 1009
|||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 957 CTAGCTTTAGGCTTGGAAGATTCTAAGGTGAACTTTCTGTGGGTCACAAGAAAAGACGTG 1016
Query 1010 GAGGAGATTATTGGAGAAGGATTCAACGATAGAATAAGAGAGAGTGGGATGATAGTGAGA 1069
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 GAGGAGATTCTTGGAGAAGGATTCAACGATAGAATAAGAGAGAGTGGGATGATAGTGAGA 1076
Query 1070 GATTGGGTGGACCAATGGGAGATATTGTCACATGAAAGTGTCAAAGGATTTTTGAGCCAT 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 GATTGGGTGGACCAATGGGAGATATTGTCACATGAAAGTGTCAAAGGATTTTTGAGCCAT 1136
Query 1130 TGTGGGTGGAACTCAGCACAAGAGAGCATATGTGTCGGGGTCCCATTGTTGGCTTGGCCG 1189
||||| ||||||||||| |||||||||||||| || |||||||||||| |||||||||||
Sbjct 1137 TGTGGATGGAACTCAGCGCAAGAGAGCATATGCGTTGGGGTCCCATTGCTGGCTTGGCCG 1196
Query 1190 ATGATGGCCGAGCAACCGCTCAATGCGAAGATGGTTGTGGAGGAGATAAAGGTGGGAGTA 1249
||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||||||
Sbjct 1197 ATGATGGCCGAGCAACCGCTCAATGCGAAAATGGTTGTGGATGAGATAAAAGTCGGAGTA 1256
Query 1250 AGAGTTGAAACGGAAGATGGGAGTGTAAAAGGTTTTGTGACAAGAGAAGAACTAAGTGGA 1309
||||||||||||||||||||||||||| |||| || ||||||||||| ||||||||| ||
Sbjct 1257 AGAGTTGAAACGGAAGATGGGAGTGTACAAGGATTCGTGACAAGAGAGGAACTAAGTCGA 1316
Query 1310 AAGATTAAAGAACTGATGGAAGGAGAAACGGGGAAAACC-GCAAGAAAGAATGTAAAAGA 1368
|||||||||||||| ||||||||||||||||| |||| | || ||||||||||| |||||
Sbjct 1317 AAGATTAAAGAACTAATGGAAGGAGAAACGGG-AAAATCTGCGAGAAAGAATGTGAAAGA 1375
Query 1369 ATATTCGAAAATGGCGAAAGCGGCTTTGGTCGAAGGGACTGGTTCGTCATGGAAGAATTT 1428
||| || |||||||| ||||| |||||||||||||||||||||||||| |||||||| ||
Sbjct 1376 ATACTCAAAAATGGCAAAAGCAGCTTTGGTCGAAGGGACTGGTTCGTCTTGGAAGAACTT 1435
Query 1429 AGATATGATTCTTAAGGAGTTATGTAAGAGTAGAGATTCAAACGGTGCTAGTGAGTAGAG 1488
|||| |||||||||| || |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1436 AGATTTGATTCTTAATGACTTATGTAAGAGTAGAGATTCCAACGGTGCTAGTGAGTAGAG 1495
Query 1489 TG--ATTAAGAATTGAATAACTGAACCAGTCTATACGTTTACTAATTAAAACAAGTATTT 1546
|| |||||| |||| ||||||||||| | | | || || |||| |
Sbjct 1496 TGTGATTAAGGATTGGATAACTGAACC--TA-A-A-----AC---------CA-GTATAT 1536
Query 1547 TCAATATACGTCT-TGTGTAAGTCTTG---G-TTTAGTTGAAAAGATGTTATCGATTACA 1601
|||||||| || ||||||||||||| | ||||||||||||| || | | |||||||
Sbjct 1537 CCAATATACA-CTATGTGTAAGTCTTGTATGGTTTAGTTGAAAAGTTGATCTTGATTACA 1595
Query 1602 ATAACTGACTCTCTCATTTGATAATACTGACTATGATTAATATT 1645
|||| ||||| | |||||||||||| |||||||||||||||||
Sbjct 1596 ATAAATGACT-T-TCATTTGATAATTTTGACTATGATTAATATT 1637
> Ahg906507 jgi|Araly1|906507|Al_scaffold_0003_3635
Length=1449
Score = 1943 bits (1052), Expect = 0.0
Identities = 1307/1430 (91%), Gaps = 18/1430 (1%)
Strand=Plus/Plus
Query 74 CACGTGGTCCTCTTCCCTTTCATGTCAAAAGGCCACATCATCCCTCTCCTCCAATTCGGT 133
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 22 CACGTGGTCCTCTTCCCTTACATGTCAAAAGGCCACATCATCCCTCTCCTCCAATTCGGT 81
Query 134 CGTCTCCTCCTCCGTCACCACCGCAAAGAACCAACCA------TCACCGTCACCGTTTTC 187
||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 82 CGTCTCCTCCTCCGTCACCACCGCAAAGAACCAACCATCTCCTTCACCGTCACCGTCTTC 141
Query 188 ACCACTCCCAAGAACCAACCTTTCATCTCAGACTTCCTCTCGGATACGCCGGAGATCAAA 247
|||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 142 ACCACTCCTAAGAACCAACCTTTCATCTCAGACTTCCTCTCGGACGCGCCGGAGATCAAA 201
Query 248 GTCATCTCTCTCCCTTTCCCGGAAAACATCACCGGAATCCCTCCCGGCGTCGAGAACACC 307
|| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 202 GTGATTTCTCTCCCTTTCCCGGAAAACATCACCGGAATCCCTCCCGGCGTCGAGAGCACC 261
Query 308 GAAAAGCTCCCATCCATGTCACTTTTCGTCCCCTTCACACGCGCCACGAAGCTTCTCCAA 367
|| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 262 GACAAGCTCCCATCCATGTCACTTTACGTGCCCTTCACACGCGCCACGAAGCTTCTCCAA 321
Query 368 CCTTTCTTCGAAGAAACACTCAAGACTCTTCCAAAAGTTTCGTTCATGGTCTCTGATGGA 427
||||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||
Sbjct 322 CCTTTCTTCGAAGAAACACTCAAGAATCTTCCTCAAGTTTCTTTCATGGTCTCCGATGGA 381
Query 428 TTCCTCTGGTGGACATCGGAGTCTGCAGCTAAGTTCAACATTCCAAGATTTGTCTCCTAC 487
||||||||||||||||| || || |||||||||||||| ||||| || || |||| |||
Sbjct 382 TTCCTCTGGTGGACATCAGAATCCGCAGCTAAGTTCAAGATTCCTAGGTTGGTCTTTTAC 441
Query 488 GGCATGAACTCTTACTCCGCCGCTGTC-TCCATCTCTGTTTTCAAACACGAACTCTTTAC 546
|| || ||||||||| || | || ||| | ||||||| |||| ||||| ||||||||||
Sbjct 442 GGTATTAACTCTTACGCCTCTGCCGTCGT-CATCTCTACTTTCCAACACAAACTCTTTAC 500
Query 547 CGAACCGGAAAGTAAATCTGATACCGAACCGGTCACTGTACCAGACTTTCCATGGATCAA 606
||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 501 CGAACCGGAAATTAAATCTGATACCGAACCGGTCACTGTACCGGACTTTCCATGGATCCA 560
Query 607 GGTCAAGAAGTGTGATTTCGACCATGGCAC-TACCGAGCCGGAAGAATCAGGTGCAGCCC 665
|| |||||||||||| |||||||| | | |||||| || || |||||||| |||| |
Sbjct 561 TGTTAAGAAGTGTGATCTCGACCAT-GTTCTTACCGATCCAAAACAATCAGGTCCAGCTC 619
Query 666 TCGAACTA-TCTATGGACCAAATCAAGTCGACCACCACAAGCCATGGGTTTTTAGTCAAT 724
||||||| || || |||||||| | |||||||||||||||||||||||||||||||||
Sbjct 620 ACGAACTATTC-ATAGACCAAATGATTTCGACCACCACAAGCCATGGGTTTTTAGTCAAT 678
Query 725 AGCTTCTACGAGCTCGAGTCAGCATTTGTTGATTACAACAACAA-CTCTGGTGATAAACC 783
|| ||||||||||||||||||||||||||||||| |||||| || |||| ||||| |||
Sbjct 679 AGTTTCTACGAGCTCGAGTCAGCATTTGTTGATTGCAACAATAACCTCT-CTGATAGACC 737
Query 784 AAAGTCGTGGTGTGTTGGGCCACTGTGTTTGACAGATCCTCCTAAA-CAGGGGAGTGCTA 842
||||||||||||||||||||||||||||||||| |||||||||||| | | ||||||||
Sbjct 738 AAAGTCGTGGTGTGTTGGGCCACTGTGTTTGACCGATCCTCCTAAATC-GAAGAGTGCTA 796
Query 843 AACCGGCTTGGATTCATTGGTTGGATCAGAAGCGAGAGGAAGGGCGTCCGGTTTTGTACG 902
||||||||||||||||||||||||| | ||||||||| || |||||||||||||||||||
Sbjct 797 AACCGGCTTGGATTCATTGGTTGGACCGGAAGCGAGAAGAGGGGCGTCCGGTTTTGTACG 856
Query 903 TGGCGTTTGGAACGCAGGCAGAGATATCGAACAAGCAGCTTATGGAACTAGCTTTCGGCT 962
|||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||
Sbjct 857 TGGCGTTTGGAACGCAGGCAGAGATATCGAACAAGCAGCTCAAGGAACTAGCTTTAGGCT 916
Query 963 TGGAAGATTCAAAGGTGAACTTTCTGTGGGTCACAAGAAAAGATGTGGAGGAGATTATTG 1022
|||||||||| ||||||||||||||||||||||| |||||||| ||||| |||| |||||
Sbjct 917 TGGAAGATTCCAAGGTGAACTTTCTGTGGGTCACGAGAAAAGACGTGGAAGAGACTATTG 976
Query 1023 GAGAAGGATTCAACGATAGAATAAGAGAGAGTGGGATGATAGTGAGAGATTGGGTGGACC 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 977 GAGAAGGATTCAACGATAGAATAAGAGAGAGTGGGATGATAGTGAGAGATTGGGTGGACC 1036
Query 1083 AATGGGAGATATTGTCACATGAAAGTGTCAAAGGATTTTTGAGCCATTGTGGGTGGAACT 1142
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1037 AATGGGAGATATTGTCACATGAAAGTGTCAAAGGATTTTTGAGCCATTGTGGATGGAATT 1096
Query 1143 CAGCACAAGAGAGCATATGTGTCGGGGTCCCATTGTTGGCTTGGCCGATGATGGCCGAGC 1202
|||| |||||||||||||| || |||||||||||| ||||||||||||||||||||||||
Sbjct 1097 CAGCTCAAGAGAGCATATGCGTTGGGGTCCCATTGCTGGCTTGGCCGATGATGGCCGAGC 1156
Query 1203 AACCGCTCAATGCGAAGATGGTTGTGGAGGAGATAAAGGTGGGAGTAAGAGTTGAAACGG 1262
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1157 AACCATTCAATGCGAAGATGGTTGTGGAGGAGATAAAGGTCGGAGTAAGAGTTGAAACGG 1216
Query 1263 AAGATGGGAGTGTAAAAGGTTTTGTGACAAGAGAAGAACTAAGTGGAAAGATTAAAGAAC 1322
|||||||||||||||||||||| ||||||||||| ||||||||| ||||| |||||||||
Sbjct 1217 AAGATGGGAGTGTAAAAGGTTTCGTGACAAGAGAGGAACTAAGTCGAAAGGTTAAAGAAC 1276
Query 1323 TGATGGAAGGAGAAACGGGGAAAACCGCAAGAAAGAATGTAAAAGAATATTCGAAAATGG 1382
| ||||||||||||||||| |||||||||||||| ||||| |||||||| || |||||||
Sbjct 1277 TAATGGAAGGAGAAACGGGAAAAACCGCAAGAAAAAATGTGAAAGAATACTCAAAAATGG 1336
Query 1383 CGAAAGCGGCTTTGGTCGAAGGGACTGGTTCGTCATGGAAGAATTTAGATATGATTCTTA 1442
| ||||| |||||||||||||||||||||||||| ||||||||||||||| || ||||||
Sbjct 1337 CAAAAGCAGCTTTGGTCGAAGGGACTGGTTCGTCTTGGAAGAATTTAGATTTGCTTCTTA 1396
Query 1443 AGGAGTTATGTAAGAGTAGAGATTCAAACGGTGCT-AGTGAGTAGAGTGA 1491
|||||||||| ||||||| ||| ||||||||| | | | ||| ||||||
Sbjct 1397 AGGAGTTATGCAAGAGTAAAGAGCCAAACGGTGTTTA-TAAGTTGAGTGA 1445
> Ahg350625 jgi|Araly1|350625|fgenesh1_pg.C_scaffold_6001218
Length=1473
Score = 1003 bits (543), Expect = 0.0
Identities = 1175/1471 (80%), Gaps = 80/1471 (5%)
Strand=Plus/Plus
Query 50 ATGTCCGTTTCAACACATCACCACCACGTGGTCCTCTTCCCTTTCATGTCAAAAGGCCAC 109
||| ||||||| | |||| || || ||||| |||||||||| ||||||||||||||||
Sbjct 1 ATGGCCGTTTC-A-TCATC-GCATCATGTGGTTCTCTTCCCTTACATGTCAAAAGGCCAC 57
Query 110 ATC-ATCCCTCTCCTCCAATTCGGTCGTCTCCTCCTCCGTCACCA-----------CC-G 156
| | || |||||||||||||||| |||||||||||||||||||| || |
Sbjct 58 A-CGATTCCTCTCCTCCAATTCGCCCGTCTCCTCCTCCGTCACCACCGTGTCGTCCCCGG 116
Query 157 CAAAGAACCAACCATC-ACCGTCACCGTTTTCACCACTCCC-AAGAACCAACCTTTCATC 214
| | |||||||||| | |||||||||| |||||||| ||| ||||||||||| ||| ||
Sbjct 117 CGACGAACCAACCA-CTTCCGTCACCGTCTTCACCAC-CCCAAAGAACCAACCATTCGTC 174
Query 215 TCAGACTTCCTCTCGGA--T-AC-GCCGGAGATCAAAGTCATCTCTCTCCCTTTCCCGGA 270
||| |||||||||| || | || | | |||||||| ||||| ||||||||||| ||
Sbjct 175 TCAAACTTCCTCTCCGACGTCACATCATCA-ATCAAAGTAATCTCCCTCCCTTTCCCTGA 233
Query 271 AAACATCACCGGAATCCCTCCCGGCGTCGAGAACACCGAAAAGCTCCCATCCATGTCACT 330
||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 234 AAACATCGCCGGAATCCCTCCCGGCGTCGAGAACACCGAAAAGCTCCCTTACATGTCACT 293
Query 331 TTTCGTCCCCTTCACACGCGCCACGAAG-CTTCTCCAACCTTTCTTCGAAGAA-ACACTC 388
|| ||| |||||||| ||||| || || || ||||| ||||||||||||| | | ||||
Sbjct 294 TTACGTGCCCTTCACGCGCGCTACCAAATCT-CTCCAGCCTTTCTTCGAAGCAGA-ACTC 351
Query 389 AAGACTCTTCCA-AAAGTTTCGTTCATGGTCTCTGATGGATTCCTCTGGTGGACATCGGA 447
|||| |||| | ||||| || ||||||||||| ||||||||| | ||||||||||||||
Sbjct 352 AAGAATCTTG-AGAAAGTGTCTTTCATGGTCTCCGATGGATTCTTATGGTGGACATCGGA 410
Query 448 GTCTGCAGCTAAGTTCAACATTCCAAGATTTGTCTCCTACGGCATGAACTCTTACTCCGC 507
||||| ||||| || | ||||| ||| | | || ||||||||||||||| ||| | |
Sbjct 411 ATCTGCCGCTAAACTCGAGATTCCGAGACTCGCCTTCTACGGCATGAACTCGTACGCATC 470
Query 508 CGCTGTCTCCATCT-CTGTTTTCAA-ACACGAACTCTTTACCGAACCGGAAAGT---AAA 562
||| | | | ||| | |||| | |||||| ||||||||| ||||||||||| |||
Sbjct 471 GGCTATGTAC-TCTGCCGTTT-CGGTACACGAGCTCTTTACCAAACCGGAAAGTGTTAAA 528
Query 563 TCTGATACCGAACCGGTCACTGTACCAGACTTTCCATGGATCAAG-GTCAAGAAGTGTGA 621
|||||||| |||||||| |||||||| || ||||||||||| ||| || |||||||| ||
Sbjct 529 TCTGATACTGAACCGGTTACTGTACCGGATTTTCCATGGAT-AAGTGTTAAGAAGTGCGA 587
Query 622 TTTCGACCATGGCACT-ACCGAGCCGGAAGAATC-AGGTGCAGCCCTCGAACTATCTATG 679
||||||| || | ||||| ||||| |||| || | |||| | || ||| | |||
Sbjct 588 GTTCGACCC-GGTTGTGACCGAACCGGATCAATCGAG-TCCAGCGTTTGAGCTAGCCATG 645
Query 680 GACCAAATCAAGTCGACCACCACAAGCCATGG-GTTTTTAGTCAATAGCTTCTACGAGCT 738
||||| || | ||| |||| | ||| | ||| ||| | ||| || || || ||||||||
Sbjct 646 GACCATATTATGTCCACCAAGAAAAGTCGTGGAGTTAT-AGTGAACAGTTTTTACGAGCT 704
Query 739 CGAGTCAGCATTTGTTGATTA-CAACAACAACTCTGGTGATAA--A-CCAAAGTCGTGGT 794
|||| || | ||| |||| || | | | || || | || | | |||||| ||||||
Sbjct 705 CGAGCCAACGTTTCTTGACTATCGGCT-C--CT-TGATAATGATGAGCCAAAGCCGTGGT 760
Query 795 GTGTTGGGCCACTGTGTTTGACAGATCCTCCTAAACAGGGGAGTGCTAAACCGGCTTGGA 854
|||||||||| |||||||| | |||||||||||| || ||||| |||||||| |||||
Sbjct 761 GTGTTGGGCCTTTGTGTTTGGTAAATCCTCCTAAACCGGAGAGTGATAAACCGGATTGGA 820
Query 855 TTCATTGGTTGGATCAGAAGCGAGAGGAAGGGCGTCCGGTTTTGTACGTGGCGTTTGGAA 914
||||||||||||| | ||| | ||||||| | |||||||| |||||||||||||||| |
Sbjct 821 TTCATTGGTTGGACCGGAAACTAGAGGAAAGATGTCCGGTTATGTACGTGGCGTTTGGTA 880
Query 915 CGCAGGCAGAGATATCGAACAAGCAGCTTATGGAACTAGCTTTCGGCTTGGAAGATTCAA 974
||||||| |||||||| ||| | ||||| | ||| | || || || ||||||||||| |
Sbjct 881 CGCAGGCTGAGATATCAAACGATCAGCTCAAAGAAATTGCATTAGGGTTGGAAGATTCCA 940
Query 975 AGGTGAACTTTCT-GTGGGTCACAAGAAAAGA-TGTGGAGGAGATTAT-TGGAG-A--AG 1028
|||| || ||||| ||||||||| ||||| || | |||| || | || ||||| | ||
Sbjct 941 AGGTAAA-TTTCTTGTGGGTCACGAGAAAGGACT-TGGAAGA-AGTAACTGGAGGATTAG 997
Query 1029 GATTC-AACGATAGAAT-AAGAGAG-AGTGGGATGATAGTGAGAGATTGGGTGGACCAAT 1085
| ||| || | ||| | || |||| | ||||||||| |||||||||||||| |||||||
Sbjct 998 GGTTCGAAA-AGAGAGTGAA-AGAGCA-TGGGATGATTGTGAGAGATTGGGTAGACCAAT 1054
Query 1086 GGGAGATATTGTCACATGAAAGTGTCAAAGGATTTTTGAGCCATTGTGGGTGGAACTCAG 1145
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct 1055 GGGAGATATTGTCACATGAAAGTGTCAAAGGATTTTTGAGTCATTGTGGATGGAACTCGG 1114
Query 1146 CACAAGAGAGCATATGTGTCGGGG-TCCCATTGTTGGCTTGGCCGATGATGGCCGAGCAA 1204
| ||||||||||| || | | || | || | | |||||||| |||||||| |||||
Sbjct 1115 CGCAAGAGAGCATTTGCG-CTGGAATTCCGCTACTCGCTTGGCCAATGATGGCAGAGCAG 1173
Query 1205 CCGCTCAATGCGAAGATGGTTGTGGAGGAGATAAAGGTGGGAGTAAGAGTTGAAACGGAA 1264
|| |||||||||||| |||| ||||||||| ||||| | ||||||||| | ||||| |||
Sbjct 1174 CCACTCAATGCGAAGTTGGTAGTGGAGGAGCTAAAGATTGGAGTAAGAATCGAAACAGAA 1233
Query 1265 GATGGGAGTGTAAAAGGTTTTGTGACAAGAGAAGAACTAAGTGGAAAGATTAAAGAACTG 1324
||||| ||||| ||||| || ||||||||||||||||| ||| ||||| ||||| || ||
Sbjct 1234 GATGGAAGTGTGAAAGGATTCGTGACAAGAGAAGAACTTAGTCGAAAGGTTAAACAATTG 1293
Query 1325 ATGGAAGGAGAAACGGGGAAAACCGCAA-GAAAGAATGTAAAAGAATATTCGAAAATGGC 1383
||||||||||| | |||||| || || ||| |||||| ||||| ||| || |||| ||
Sbjct 1294 ATGGAAGGAGATATGGGGAAGACTATAATGAA-GAATGTGAAAGAGTATGCGGAAATAGC 1352
Query 1384 GAAAGCGGCTTTGG-TCGAAGGGACTGGTTCGTCATGGAAGAATTTAGATATGA-TTCTT 1441
|||| ||||||| || ||||||| ||||| || ||||||||||| ||| | | |||||
Sbjct 1353 GAAAAAAGCTTTGGCTC-AAGGGACCGGTTCTTCTTGGAAGAATTTGGAT-TCACTTCTT 1410
Query 1442 -AAGGAGTTATGTAAGAGTAGAGATTCAAAC 1471
||| ||| |||||||||| ||| |||||
Sbjct 1411 GAAGC-GTTTTGTAAGAGTATAGAGCCAAAC 1440
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61668106655
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5