BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G16950.1
Length=3345
Score E
Sequences producing significant alignments: (Bits) Value
Ahg931532 jgi|Araly1|931532|scaffold_303989.1 4453 0.0
Ahg480576 jgi|Araly1|480576|fgenesh2_kg.3__3277__AT2G16960.1 678 0.0
> Ahg931532 jgi|Araly1|931532|scaffold_303989.1
Length=2716
Score = 4453 bits (2411), Expect = 0.0
Identities = 2625/2727 (96%), Gaps = 20/2727 (1%)
Strand=Plus/Plus
Query 73 ACCTTTTTGCCACAACAATCATGGCGGCGACGGCGGTGGTCTGGCAACCCCGAGACGATG 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ACCTTTTTGCCACAACAATCATGGCGGCGACGGCGGTGGTCTGGCAACCCCGAGACGATG 60
Query 133 GTCTCGCTGAGATCTGTTCTCTTCTCGAACAACAGATTTCTCCTTCCTCCGTCGTTGACA 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GTCTCGCTGAGATCTGTTCTCTTCTCGAACAACAGATTTCTCCTTCCTCCGTCGTTGACA 120
Query 193 AGTCTCAGATTTGGAAGCAGCTTCAACACTTCTCTCAGTTTCCTGATTTCAACAACTATC 252
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 121 AGTCTCAGATTTGGAAGCAGCTTCAACACTTCTCTCAGTTCCCTGATTTCAACAACTATC 180
Query 253 TCGTCTTCATCCTCGTTCGCGCTGAGGGAAAGTCTGTTGAGGTTCGTCAAGCTGCTGGAT 312
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 181 TCGTCTTCATCCTCGTTCGCGCTGAGGGAAAGTCCGTAGAGGTTCGTCAAGCTGCTGGAT 240
Query 313 TGCTTTTGAAAAATAATTTGAGGGGTGCTTATCCATCCATGACTCAAGAAAACCAAAAAT 372
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 241 TGCTTCTGAAAAATAATTTGAGGGGTGCTTATCCATCCATGGCTCAAGAAAACCAAAAAT 300
Query 373 ATATCAAGTCAGAGTTACTGCCTTGTCTGGGAGCAGCGGACAGGAATATACGGACTACAG 432
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 301 ATATCAAGTCGGAGTTGCTGCCTTGTCTTGGAGCAGCGGACAGGAATATACGGACTACAG 360
Query 433 TTGGAACTATCATCAGTGTTATTGTTAATATTGAGGGAGTTTCTGGATGGCATGAGCTTT 492
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 361 TTGGAACTATTATCAGTGTTATTGTTAATATAGAGGGAGTTTCTGGATGGCATGAGCTTT 420
Query 493 TGCCAGCTCTTGTTACTTGTTTAGACAGTAATGACCTTAATCACATGGATGGTGCTATGG 552
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 421 TGCCAGCTCTTGTTACTTGTTTAGACAGTAATGACCTCAATCACATGGATGGTGCTATGG 480
Query 553 ATGCATTGTCAAAGATTTGTGAGGATATTCCGCATGTCTTGGATACAGAAGTGCCTGGCT 612
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 481 ATGCATTGTCAAAGATTTGTGAGGATATCCCGCATGTCTTGGATACAGAAGTGCCTGGCT 540
Query 613 TAGCAGAACGCCCTATCAACATTTTCCTGCCTAGGCTATTACAGTTTTTTCAGTCACCCC 672
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 541 TAGCAGAACGCCCTATTAACATTTTCCTGCCTAGGCTATTTCAGTTTTTTCAGTCACCCC 600
Query 673 ATGCTTCACTGAGGAAGCTTGCCCTGGGTTCTGTGAACCAGTATATCATTATAATGCCTG 732
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct 601 ATGCTTCACTGAGGAAGCTTGCCCTGGGTTCTGTGAACCAATATATCATAATCATGCCTG 660
Query 733 CTGTAATTTGGCAGGCTTTGTACAATT-CATTGGATAAGTACCTTCAGGGGTTGTTTGTC 791
| | ||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 661 C----------C--GCTTTGTACAATTCCA-TGGATAAGTACCTTCAGGGGTTGTTTGTC 707
Query 792 CTAGCCAATGATCCTGTACCAGAAGTCAGAAAATTGGTCTGCGCAGCATTTGTGCATCTC 851
|| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 708 CTCGCAAATGATCCTGTAGCAGAAGTCAGAAAATTGGTCTGCGCAGCATTTGTGCATCTC 767
Query 852 ACGGAAGTACTCCCCTCATCTATAGAGCCGCATCTCAGGAATGTCATGGAATACATGTTA 911
|| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 768 ACAGAAGTACTCCCCTCATCCATAGAGCCGTATCTCAGGAATGTCATGGAATACATGTTA 827
Query 912 CAAGTTAATAGA-GACCCTGACGAAGAAGTGTCG-CTCGAAGCATGTGAATTTTGGTCTG 969
|||||||| | | ||||||||||||||||||| | || ||||||||||||||||||||||
Sbjct 828 CAAGTTAACA-ATGACCCTGACGAAGAAGTGT-GTCTTGAAGCATGTGAATTTTGGTCTG 885
Query 970 CATACTGTGATGCTCAGCTACCTCCAGAGAACTTGAAAGAGTTTCTGCCACGCCTAATTC 1029
|||||||||| || ||||| |||||||||||| ||||||||||||||||| |||||||||
Sbjct 886 CATACTGTGACGCCCAGCTGCCTCCAGAGAACCTGAAAGAGTTTCTGCCAGGCCTAATTC 945
Query 1030 CAGTGTTGCTCGAAAACATGGCTTATGCAGATGACGACGAGTCACTTTTGGATGCAGAGG 1089
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 946 CAGTGTTGCTCGCAAACATGGCTTATGCAGATGACGACGAGTCACTTTTGGATGCAGAGG 1005
Query 1090 AAGATGAGTCTCAACCAGACAGAGATCAGGATTTAAAACCTCGTTTTCACACATCAAGAC 1149
|||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 1006 AAGATGAGTCGCAACCAGACAGAGATCAGGATTTGAAACCTCGTTTTCATACATCAAGAC 1065
Query 1150 TTCATGGATCAGAAGATTTtgatgatgatgatgatgaCTCGTTTAATGTGTGGAATTTAA 1209
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1066 TTCATGGATCAGAAGATTTTGATGATGATGATGATGACTCGTTTAACGTGTGGAATTTAA 1125
Query 1210 GAAAGTGTAGTGCAGCAGCTATTGACGTTCTCTCTAATGTTTTTGGAGATGAAATCCTTC 1269
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 1126 GAAAGTGTAGTGCAGCAGCTATTGACATTCTCTCTAATGTATTTGGAGATGAAATCCTTC 1185
Query 1270 CAGCACTCATGCCCCTAATTCAGAAAAATTTATCAGCTTCTGGTGATGAGGCCTGGAAAC 1329
||||| |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||
Sbjct 1186 CAGCAATCATGCCCCTAATTCAGACAAATTTATCAGCCTCTGGTGATGACGCCTGGAAAC 1245
Query 1330 AAAGGGAAGCTGCTGTTTTGGCTCTCGGCGCTATTGCTGAAGGCTGCATGAATGGTCTTT 1389
||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||
Sbjct 1246 AAAGGGAAGCTGCTGTTTTGGCTCTTGGGGCTATTTCTGAAGGCTGCATGAATGGTCTTT 1305
Query 1390 ACCCTCACTTGTCTGAGATCGTGGCATTTCTTCTTCCTCTTTTAGATGATAAATTCCCGC 1449
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1306 ACCCTCATTTGTCTGAGATCGTGGCATTTCTTCTTCCTCTTTTAGATGATAAATTCCCGC 1365
Query 1450 TCATACGGAGCATATCTTGCTGGACGCTTTCTCGATTTGGCAAGTATCTTATCCAGGAAA 1509
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1366 TGATACGAAGCATATCTTGCTGGACGCTTTCTCGATTTGGCAAGTATCTTATCCAGGAAA 1425
Query 1510 GTGGCAATCCGAAGGGTTATGAACAATTTGAGAAAGTTCTTATGGGTCTTCTCCGCAGAC 1569
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1426 GTGGCAATCCGAAGGGTTATGAACAATTTGAGAGAGTTCTTATGGGTCTTCTCCGCAGAC 1485
Query 1570 TCTTGGATACGAACAAGCGGGTTCAGGAGGCTGCCTGTTCAGCTTTTGCAACTGTTGAAG 1629
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1486 TCTTGGATACGAACAAGCGGGTCCAGGAGGCTGCCTGTTCAGCTTTTGCAACTGTTGAAG 1545
Query 1630 AGGATGCTGCTGAAGAGTTAGTGCCACACCTGGGTGTAATACTGCAGCATCTGATGTGCG 1689
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1546 AGGATGCTGCCGAAGAGTTAGTGCCACACCTGGGGGTAATACTGCAGCATCTGATGTGCG 1605
Query 1690 CTTTTGGAAAGTATCAGAGACGGAATTTAAGAATTGTTTATGATGCTATTGGAACACTGG 1749
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1606 CTTTTGGAAAGTATCAGAGACGGAACTTAAGAATTGTTTATGATGCTATTGGAACACTGG 1665
Query 1750 CAGATTCAGTTAGAGAAGAGTTGAACAAGCCTGCTTATCTTGAGATTCTGATGCCTCCAC 1809
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1666 CAGATTCAGTTAGAGGAGAGTTGAACAAGCCTGCTTATCTTGATATTCTGATGCCCCCAC 1725
Query 1810 TGGTTGCAAAGTGGCAACAACTTTCAAATTCAGATAAAGATCTATTTCCATTGCTAGAGT 1869
||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||
Sbjct 1726 TGGTTGCAAAGTGGCAACAGCTTTCCAATTCAGATAAAGATCTATTTCCACTGCTAGAGT 1785
Query 1870 GCTTTACATCCATTTCTCAGGCTTTAGGTGTAGGATTCGCTCCATTTGCTCAGCCTGTTT 1929
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1786 GCTTCACATCCATTTCTCAGGCTTTAGGTGTAGGATTTGCTCCATTTGCTCAGCCTGTTT 1845
Query 1930 TCCAGAGATGCATGGATATCATCCAATTGCAGCAGCTGGCTAAGGTTAATCCTGCTTCTG 1989
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 1846 TCCAGAGATGCATGGATATCATCCAATTGCAGCAGCTGGCTAAGGTTGATCCTTCTTCTG 1905
Query 1990 CTGGGGCTCAGTATGACAGAGAATTTATTGTTTGTTCTCTTGATTTGCTTTCTGGACTTG 2049
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1906 CTGGGGCTCAGTATGATAGAGAATTCATTGTTTGTTCTCTTGATTTGCTTTCTGGACTTG 1965
Query 2050 CTGAAGGGCTTGGCAGTGGGATAGAGTCTCTGG-TTCAACAAAGTAACCTAAGGGATCTG 2108
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 1966 CTGAAGGGCTTGGCAGTGGGATAGAGTCTCTGGTTTC-ACAAAGTAACCTAAGGGATCTG 2024
Query 2109 CTTCTCAATTGTTGCATTGATGAAGCTGCTGATGTCAGACAAAGTGCTTTTGCCTTGATG 2168
||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||
Sbjct 2025 CTTCTCAATTGTTGCATTGATGAAGCTCCTGATGTCAGACAAAGTGCTTTTGCCCTAATG 2084
Query 2169 GGTGATCTAGCAAGAGTTTTCCCAGTCTATCTACAACCCCGCCTGCTTGATTTCCTTGAA 2228
|||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2085 GGTGATCTCGCAAGAGTATTCCCGGTCTATCTACAACCCCGCCTGCTTGATTTCCTTGAA 2144
Query 2229 ATTGCAAGCCAGCAACTGAGTGCAAACCTTAATAGAGAAAACCTTTCTGTCGCAAATAAT 2288
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 2145 ATTGCAAGCCAGCAACTGAGTGCAAACCTCAATAGAGAAAACCTTTCTGTAGCAAATAAT 2204
Query 2289 GCTTGTTGGGCCATTGGAGAATTAGCGGTCAAGGTTCGTCAAGAAGTCTCACCAATTGTG 2348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2205 GCTTGTTGGGCCATTGGAGAATTAGCGGTCAAGGTTCGTCAAGAAGTCTCACCAATTGTG 2264
Query 2349 GCCAAAGTTGTCTCTTCCCTAGGCCTGATTCTTCAACATGGAGAGGGTGTCAATAAGGCA 2408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2265 GCCAAAGTTGTCTCTTCCCTAGGCCTGATTCTTCAACATGGAGAGGGTGTCAATAAGGCA 2324
Query 2409 CTAGTTGAGAACAGTGCAATAACCCTTGGGAGACTAGCATGGATTCGTCCAGACCTCGTT 2468
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 2325 CTAGTTGAGAACAGTGCAATTACCCTTGGGAGACTAGCATGGATACGTCCAGACCTCGTT 2384
Query 2469 GCACCACACATGGACCACTTTATGAAGCCATGGTGCATGGCATTGTCAATGGTACGTGAT 2528
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2385 GCACCACACATGGAGCACTTTATGAAGCCATGGTGCATGGCATTGTCAATGGTACGTGAT 2444
Query 2529 GACATTGAGAAAGAAGATGCGTTTAGAGGATTATGTGCAGTGGTTAAAGTGAATCCATCA 2588
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2445 GACATTGAGAAAGAAGATGCATTTAGAGGATTATGTGCAGTGGTTAAAGTGAATCCATCA 2504
Query 2589 GGAGGTGTCAGCTCACTTGTTTTCATATGCCAAGCCATTGCGAGTTGGCATGAAATAAGA 2648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2505 GGAGGTGTCAGCTCACTTGTTTTCATATGCCAAGCCATTGCGAGTTGGCATGAAATAAGA 2564
Query 2649 AGCGAGGATGTCCAGACCGAAGTCTCCCAAGTACTGAACGGTTATAAACATATGCTGGGA 2708
|||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2565 AGCGAGGACGTCCAGAACGAAGTCTCCCAAGTACTGAACGGTTATAAACACATGCTGGGA 2624
Query 2709 AACTCATGGGCGGAATGTTTATCTGCTTTGGATCCTCCTGTAAAGGAAAGGCTTGCGAGA 2768
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 2625 AACTCATGGGCGGAATGTTTGTCTGCTTTGGATCCTCCAGTAAAGGAAAGGCTTGCGAGA 2684
Query 2769 TATCAAGTGTAACATTGATCATACACC 2795
|||||||||||||||||||| ||||||
Sbjct 2685 TATCAAGTGTAACATTGATCGTACACC 2711
> Ahg480576 jgi|Araly1|480576|fgenesh2_kg.3__3277__AT2G16960.1
Length=1659
Score = 678 bits (367), Expect = 0.0
Identities = 801/1005 (80%), Gaps = 51/1005 (5%)
Strand=Plus/Plus
Query 1199 GTGGAATTTAAGA-AAGTGTAGTGCAGCAGCTATTGACGTTCTCTCTAATGTTTTTGGAG 1257
||||||||||||| | || |||||| | ||||| | ||||| ||||||| |||||||
Sbjct 60 GTGGAATTTAAGAGCA-TGCAGTGCAAAATTTATTGGCATTCTCGCTAATGTATTTGGAG 118
Query 1258 ATGAAATCCTTCCAGCACTCATGCCCCTAATTCA-GAAAAATTTATC-AGCTTCTGGTGA 1315
|||||||||||| | |||||||||| || ||| | | |||| |||| || | || |||
Sbjct 119 ATGAAATCCTTCTAACACTCATGCCTCTTATTAAGGCAAAA-CTATCAAG-ATATGATGA 176
Query 1316 TGAGGCCTGGAAACAAAGGGAAGCTGCTGTTT-TGGCTCTCGGCGCTATTGCTGAAGGCT 1374
|||| | |||||| ||||||||| |||||||| | ||||| || |||||||||||||| |
Sbjct 177 TGAGACTTGGAAAGAAAGGGAAGTTGCTGTTTAT-GCTCTTGGAGCTATTGCTGAAGGAT 235
Query 1375 GC-ATGAATGGTCTT-TACCCTCAC-TTGTC-TG----AGATCGTGGCATTTCTTCTTCC 1426
|| || || | || ||||||||| ||| | || |||| || || | |||| ||
Sbjct 236 GCAAT-AA-AATTTTCTACCCTCACTTTGCCTTGTTACAGATTGTAACAATCCTTCGTCG 293
Query 1427 TCTTTTAGATGATAAATTCCCGCTCATACGGAGCATATCTTGCTGGACGCTTTCTCGATT 1486
||||||| ||||| |||| || ||| |||| || ||| | |||||||| |||| || |||
Sbjct 294 TCTTTTAAATGATCAATTTCCTCTCGTACGAAGAATAACGTGCTGGACACTTTATCAATT 353
Query 1487 TGGCA-AGTATCTTATCCAGGAAAGTGGCAATCCGAAG-GGTTA-TGAACAATTTGAG-A 1542
||||| | ||| || | |||||| | ||| || | | || ||||| ||| || |
Sbjct 354 TGGCACA-TATGTTTTTGAGGAAAAT---AATTCG--GTGAATAGTGAACTCTTT-AGAA 406
Query 1543 AAGTTCTTATGGGTCTTCTCCGCAGACTCTTGGATACGAACAAGCGGGTTCAGGAGGCTG 1602
||||||||| ||||||||| | || | | ||||||||||||| | || ||||| ||||
Sbjct 407 AAGTTCTTAAGGGTCTTCTTCTCAAAGTTTTGGATACGAACACTTGTGTCCAGGAAGCTG 466
Query 1603 CCTGTTCAGCTTTTG-CAACTGTTGAAGAGGATGCTGCTGAAGAGTTAGTGCCACACCTG 1661
| |||| ||| |||| ||||| ||||||||||||||| |||| | ||||| ||||||||
Sbjct 467 CATGTTTAGC-TTTGACAACTCTTGAAGAGGATGCTGGTGAAAACTTAGTACCACACCT- 524
Query 1662 GGTGTA-ATACT-GCAGCATCTGATGTGCGCTTTTGGAAAGTATCAGAGACGGAATTTAA 1719
| | ||| | || || || ||| |||||||||||||||||||||||||||| ||||
Sbjct 525 GAAAAAGATATTAACA-CAGCTAATGCGCGCTTTTGGAAAGTATCAGAGACGGAACTTAA 583
Query 1720 GAA-TTGTTTATGATGCTATTGGAACACTGGCAGATTCAGTTAGAGAA--GAGT-TGAAC 1775
|| || ||| |||||||||| || |||| |||||||||||| | ||| || | ||||
Sbjct 584 -AAGTTCTTTTTGATGCTATTAGAGCACTAGCAGATTCAGTT-G-GAATTGA-TCTGAAT 639
Query 1776 AAGCCTGCTTATCTTGAGATTCTGATGCCTCCACTGGTTGCAAAGT-GGCAACAACTTTC 1834
|||||| |||||||| ||||| |||| || ||||||||| | | || || ||||| ||||
Sbjct 640 AAGCCTTCTTATCTTAAGATTTTGATTCCCCCACTGGTTTCGACGTCGG-AACAAATTTC 698
Query 1835 AAATTCAGATAAAGATCTATTTCCATTGCTAGAGTGCTTTACATCCATTTCTCAGGCTTT 1894
| |||||||||||||| || ||||||||||| | ||||| |||||||||||| |||||||
Sbjct 699 AGATTCAGATAAAGATGTAATTCCATTGCTAAAATGCTTCACATCCATTTCTAAGGCTTT 758
Query 1895 AGGTGTAGGATTCGCTCCATTTGCTCAGCCTGTTTTCCAGAGATGCATGGATATCATCCA 1954
|| |||||||||||||||||| || | |||||| |||| |||||||||||| ||||
Sbjct 759 AGAAGTAGGATTCGCTCCATTTTCTTTGTATGTTTTTGAGAGGTGCATGGATATCCTCCA 818
Query 1955 ATTGCAGCAGCTGGCTAAGGTTAATCCTGCTTCTGCTGGGGCTCAGTATGACAGAGAATT 2014
| | || ||||| ||||||||| ||| || || ||||| || | | || ||| | || |
Sbjct 819 ACTACAACAGCTAGCTAAGGTTGATCATGATTTTGCTGAGGTTGAATACGACCCAAAAAT 878
Query 2015 TATTGTTTGTTCTCTTG-ATTTGCTTTCTGGACTTGCTGAAGGGCTTGGCAGTGGGATAG 2073
||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||
Sbjct 879 CGTTGTTTGTTCTCTTGAATTTG-TTTCTGGAGTTGCTGAAGGGCTTGGCAGTGGGATAG 937
Query 2074 AGTCTCTGGTT-CAACAAAGTAACCTAAGGGATCTGCTTCTCAATTGTTGCATTGATGAA 2132
|||||||| || || |||||||| ||||||||| |||||||||| |||||||| ||||||
Sbjct 938 AGTCTCTGCTTTCA-CAAAGTAATCTAAGGGATATGCTTCTCAAGTGTTGCATGGATGAA 996
Query 2133 GCTGCTGATGTCAGACAAAGTGCTTTTGCC-TTGATGGGTGATCT 2176
|| ||||||| ||| |||||||||||||| || || |||||||
Sbjct 997 ACTCCTGATGTTAGAGAAAGTGCTTTTGCCCTT-ATTTGTGATCT 1040
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 126275027214
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5