BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G17150.1 Length=3183 Score E Sequences producing significant alignments: (Bits) Value Ahg906541 jgi|Araly1|906541|Al_scaffold_0003_3669 4279 0.0 Ahg491122 jgi|Araly1|491122|fgenesh2_kg.7__555__AT4G35270.1 826 0.0 > Ahg906541 jgi|Araly1|906541|Al_scaffold_0003_3669 Length=2745 Score = 4279 bits (2317), Expect = 0.0 Identities = 2613/2753 (95%), Gaps = 31/2753 (1%) Strand=Plus/Plus Query 246 ATGGAAGATGATGGTGGTAGTGATGGAGGCGAAGGAAATGGTGGGTTTTCACCTAATTCT 305 |||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct 1 ATGGAAGATGATGGTGGTGGCGATGGAGGCGAAGGAAATGGTGGGTTTTCGCCTAATTCT 60 Query 306 AGCTTTGGGGCATTCGCTGACACTGCCATGGATTTGGATTTCATGGATGAACTCTTGTTT 365 ||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 61 AGCTTTGGGGCATTCTCTGACACGGCCATGGATTTGGATTTCATGGATGAGCTCTTGTTT 120 Query 366 GATGGATGTTGGCTAGAGACAACAGATAGTAAGAGCTTGAAGCAGACAGAACAATCTCCT 425 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct 121 GATGGATGTTGGCTAGAGACAACAGATAGTAAGAGCTTGAACCAGACAGAACAATCTGCT 180 Query 426 TCAGCTTCTACCGCCATGAATGACAATAGCCCTTTCCTCTGCTTTGGTGAGAATCCATCT 485 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 181 TCAGCTTCTACCGCCATGAATGACAATAGCCCTTTCCTCTGCTTTGGTGAGAACCCATCT 240 Query 486 CAAGATAATTTCTCTAATGAAGAAACAGAGAGAATG-----T--TT--CC---T---CAG 530 |||||||||||||||||||||||||||||||||||| | || || | ||| Sbjct 241 CAAGATAATTTCTCTAATGAAGAAACAGAGAGAATGCTTCCTCATTCACCTAGTAACCAG 300 Query 531 GCTGAAAAGTTTCTCCTAGAAGAAGCTGAGGTGGGAAAAAGTTGGTGGATTGCTCCAAGT 590 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 301 GCTGAAAAGTTTCTCCTCGAAGAAGCTGAGGTGGGAAAAAGTTGGTGGATTGCCCCAAGA 360 Query 591 GCAAGTGAAGGCCCGTCTTCATCTGTGAAGGAGAGGCTACTACAAGCTATTAGTGGTCTT 650 ||||||||||| || |||||||||||||||||||| ||| ||| |||||||||||||||| Sbjct 361 GCAAGTGAAGGACCTTCTTCATCTGTGAAGGAGAGACTATTACGAGCTATTAGTGGTCTT 420 Query 651 AACGAGGCGGTGCAAGATAAGGACTTCTTGGTTCAGATATGGGTGCCAATTCAGCAGGAA 710 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 AACGAGGCGGTGCAAGATAAGGACTTCTTGGTTCAGATATGGGTGCCAATTCAGCAGGAA 480 Query 711 GGGAAGAGCTTTCTTACTACTTGGGCTCAGCCACATTTATTCAACCAAGAATACTCCAGC 770 |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| Sbjct 481 GGGAAGAGCTTTCTGACCACTTGGGCTCAGCCACATTTATTTAACCAAGAATACTCCAGC 540 Query 771 CTTGCAGAATACAGACATGTTTCAGAGACTTATAATTTCCCGGCTGATGAGGGTATGAAA 830 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 CTTGCAGAATACAGACATGTTTCAGAGACTTATAATTTCCCGGCTGATGAGGGTATGAAA 600 Query 831 GATTTTGTGGGTCTTCCCGGTCGTGTTTTCTTGCAGAAGTTTCCTGAGTGGACTCCTGAT 890 || |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 601 GAATTTGTGGGTCTTCCTGGTCGTGTTTTCTTGCAGAAGTTGCCTGAGTGGACTCCTGAT 660 Query 891 GTGCGTTTCTTTAGAAGAGATGAATATCCACGCATCAAAGAAGCACAAAAGTGTGATGTT 950 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 GTGCGGTTCTTTAGAAGAGATGAATATCCACGCATCAAAGAAGCACAAAAGTGTGATGTT 720 Query 951 CGTGGTTCACTTGCCCTTCCTGTTTTCGAAAGAGGTAGTGGGACTTGTTTGGGTGTTGTT 1010 ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 721 CGTGGGTCACTTGCCCTTCCTGTTTTCGAAAGAGGTAGTGGGATTTGTTTGGGTGTTGTT 780 Query 1011 GAGATCGTCACAACAACTCAGAAGATGAATTACCGGCAAGAACTTGAGAAGATGTGTAAA 1070 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 GAGATCGTCACAACAACTCAGAAGATGAATTACCGGCAAGAACTTGAGAAGATGTGTAAA 840 Query 1071 GCTCTTGAGGCCGTCGATCTAAGGAGTTCAAGTAACTTGAACACTCCAAGCTCTGAGTTT 1130 ||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| Sbjct 841 GCTCTTGAGGCCGTCAATCTAAGGAGTTCAAGTAACTTGAACCCACCAAGCTCTGAGTTT 900 Query 1131 CTGCAGGTCTATAGTGATTTCTACTGTGCTGCATTACCTGAAATAAAAGATTTCCTGGCC 1190 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 901 CTGCAGGTCTATAGTGATTTCTACTGTGCTGCATTACCTGAAATAAAAGATTTCTTGGCC 960 Query 1191 ACAATCTGCAGATCATATGATTTTCCTCTAGCTTTGTCATGGGCGCCGTGTGCTCGGCAA 1250 ||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 961 ACAGTCTGCAGATCATATGATTTGCCTCTAGCTTTGTCATGGGCTCCGTGTGCTCGGCAA 1020 Query 1251 GGGAAAGTTGGTTCCCGACATTCTGATGAGAACTTCTCTGAGTGTGTTTCAACAATCGAT 1310 ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1021 GGGAAAGTTGGCTCCCGACATTCTGATGAGAACTTCTCTCAGTGTGTTTCAACAATCGAT 1080 Query 1311 TCTGCTTGTTCTGTCCCCGACGAACAGAGCAAAAGTTTTTGGGAGGCATGCTCTGAACAC 1370 |||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 1081 TCTGCTTGCTCTGTCCCTGACGAACAGAGCAAAATTTTTTGGGAGGCATGCTCTGAACAC 1140 Query 1371 CATCTGCTCCAGGGGGAAGGCATTGTTGGGAAAGCATTTGAA-GCCACCAAACTCTTTTT 1429 ||| |||||||||||||||||||||| ||||||||| || || ||||| ||||| ||||| Sbjct 1141 CATTTGCTCCAGGGGGAAGGCATTGTAGGGAAAGCA-TTCAAGGCCACTAAACTGTTTTT 1199 Query 1430 TGTGCCCGAAGTGGCCACATTTAGCAAGACTAACTACCCCCTTGCACACCACGCCAAGAT 1489 ||||||||||||| ||||||||||||||| ||||| || |||||||||||||||||||| Sbjct 1200 TGTGCCCGAAGTGATCACATTTAGCAAGACCAACTATCCTCTTGCACACCACGCCAAGAT 1259 Query 1490 ATCTGGACTACATGCTGCTTTAGCAGTTCCATTAAAGAGCAAATCTGGTTTGGTTGAGTT 1549 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 1260 ATCTGGACTACATGCTGCTTTAGCAGTCCCATTAAAAAGCAAATCTGGTTTGGTTGAGTT 1319 Query 1550 TGTGTTGGAATTTTTCTTTCCGAAAGCATGCCTTGACACTGAAGCGCAACAGGAAATGCT 1609 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1320 TGTGTTGGAATTTTTCTTTCCAAAAGCATGCCTTGACACTGAAGCGCAACAGGAAATGCT 1379 Query 1610 CAAGTCACTATGTGTGACACTGCAGCAAGATTTCAGGAGTTCAAATCTTTTCA-T--CAA 1666 ||||||||||| |||||| |||||||||||||||||||||||||||||| ||| | ||| Sbjct 1380 CAAGTCACTATCTGTGACGCTGCAGCAAGATTTCAGGAGTTCAAATCTTGTCATTGACAA 1439 Query 1667 AGACCTAG-AGTTAGAAGTCGTATTACCTGTAAGAGAGACAATGCTCTTCTCAGAAAACC 1725 |||||| | |||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 1440 AGACCT-GAAGTTAGAAGTCGTATTGCCTGTTAGAGAGACAATGCTCTTCTCAGAAAACC 1498 Query 1726 TGCTATGTGGAGCAGAAACCGTAGAGTCGTTGACAGAAATTCAAATGCAAGAATCCTCAT 1785 |||| ||||||||||||||| |||||| |||||||||||| |||||||||||||||||| Sbjct 1499 CGCTAAGTGGAGCAGAAACCGCAGAGTCTTTGACAGAAATTGAAATGCAAGAATCCTCAT 1558 Query 1786 GGATCGCCCACATGATAAAGGCAAACGAGAAGGGTAAAGATGTATCACTTTCTTGGGAGT 1845 ||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1559 GGATCTCCCACATGCTAATGGCAAACGAGAAGGGTAAAGATGTATCACTTTCTTGGGAGT 1618 Query 1846 ACCAGAAAGAAGATCCTAAAGAGCTCTCATCTGGCCGGGAGAACAGTCAGCTTGATCCAG 1905 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 1619 ACCAGAAAGAAGATCCTAAAGAGCTCTCATCTGGCCGGGAAAACACTCAGCTTGATCCAG 1678 Query 1906 TCCCCAATAATGTTCCTTTAGAAGCTGAGCAATTACAGCAAGCATCAACTCCAGGACTCA 1965 |||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 1679 TCCCAAATAATGTTCCTTTAGAAGCTGAGCAATTTCAGCAAGCATCAACTTCAGGACTCA 1738 Query 1966 GAGTCGACATC-GGTCCAAGCACAGAATCAGCTTCGACTGGTGGGGGAAATATGTTAAGC 2024 |||||||| | ||||||||||| |||||| |||||| ||||||||||||||||||| || Sbjct 1739 AAGTCGACA-CAGGTCCAAGCACTGAATCATCTTCGATTGGTGGGGGAAATATGTTAGGC 1797 Query 2025 AGTAGGAGACCAGGGGAGaaa-aaaaGAGCAAAAACAGAAAAGACCATTGGCTTGGAGGT 2083 ||||||| ||||||||| ||| | |||| ||||||||||||||||||||||||||||||| Sbjct 1798 AGTAGGAAACCAGGGGA-AAAGAGAAGAACAAAAACAGAAAAGACCATTGGCTTGGAGGT 1856 Query 2084 TCTTCGACAATACTTTGCTGGAAGCCTCAAGGATGCAGCCAAGAGCATTGGTGTTTGTCC 2143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1857 TCTTCGACAATACTTTGCTGGAAGCCTCAAGGATGCAGCCAAGAGCATTGGTGTTTGTCC 1916 Query 2144 AACTACCTTGAAAAGGATATGCAGGCAACATGGAATAATGCGATGGCCCTCCCGAAAAAT 2203 ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 1917 AACTACCTTGAAAAGGATATGTAGGCAACATGGGATAATGCGATGGCCCTCCCGAAAAAT 1976 Query 2204 CAAGAAGGTTGGGCATTCGTTGAAGAAACTCCAACTAGTTATGGACTCTGTCCAAGGTGC 2263 ||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| Sbjct 1977 CAAGAAGGTTGGGCATTCGTTAAAGAAACTCCAACTTGTTATGGACTCTGTTCAAGGTGC 2036 Query 2264 GCAGGGCTCTATCCAACTCGATTCATTCTATACAAGCTTCCCAGAGTTGAACTCCCCAAA 2323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2037 GCAGGGCTCTATCCAACTCGATTCATTCTATACAAGCTTCCCAGAGTTGAACTCCCCAAA 2096 Query 2324 TATGTCTAGCAATGGCCCTTCCTTGAAGAGTAATGAACAGCCAAGTCATTTGAATGCTCA 2383 ||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct 2097 TATGTCTAGTAATGGCCCTTCCTTGAAGAATAATGAACAGTCAAGTCATTTGAATGCTCA 2156 Query 2384 AACCGATAATGGTATTATGGCAGAGGAAAACCCCAGGTCACCATCATCTTCTTGCAGCAA 2443 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2157 AACCGATAATGGTATTATGGCAGAGGA---CCCCAGGTCACCATCATCTTCTTGCAGCAA 2213 Query 2444 GAGCTCTGGTTCAAGCAACAATAATGAGAATACTGGAAACATTCTAGTTGCTGAGGATGC 2503 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct 2214 GAGCTCTGGTTCAAGCAACAATAATGAGAATACTGCAAACATTCTAGTTGCTGAGGAAGC 2273 Query 2504 TGATGCGGTGTTAAAGAGAGCTCATAGCGAAGCACAACTGCATAATGTGAATCAGGAGGA 2563 |||||| |||||||||||||||||| | ||||| |||||||||||||||||||||||||| Sbjct 2274 TGATGCAGTGTTAAAGAGAGCTCATTGTGAAGCGCAACTGCATAATGTGAATCAGGAGGA 2333 Query 2564 AACAAAATGTCTTGCAAGAACCCAGAGCCATAAAACATTCAAGGAGCCTCTTGTTCTTGA 2623 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2334 AACAAAATGTCTTGCAAGAACCCAGAGCCATAAAACATTCAAGGAGCCTCCTGTTCTTGA 2393 Query 2624 TAATTCATCTCCATTAACAGGTAGTAGCAACACGAGTTTAAGAGCTAGAGGTGCCATCAA 2683 ||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||| Sbjct 2394 AAATTCATCTCCATTACCAGGTAGTAGCAACAAGAGCTTAAGAGCTGGAGGTGCCATCAA 2453 Query 2684 AGTGAAAGCGACATTTGGTGAGGCCAGAATACGGTTTACCTTACTCCCGAGTTGGGGCTT 2743 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 2454 AGTGAAAGCGACATTTGGTGAGGCCAGAATACGGTTTACCTTGCTCCCGAGTTGTGGCTT 2513 Query 2744 C-GCAGAGCTGAAGCAAGAGATTGCTAGGCGTTTCAACATAGATGACATTTCCTGGTTTG 2802 | | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2514 CAG-AGAGCTGCAGCAAGAGATTGCTAGGCGTTTCAACATAGATGACATTTCCTGGTTTG 2572 Query 2803 ACCTTAAGTACCTGGATGATGATAAGGAGTGGGTTCTTCTGACATGTGAAGCGGATCTCG 2862 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 2573 ATCTTAAGTACCTGGATGATGATAAGGAGTGGGTTCTTCTGACATGTGAAGCAGATCTTG 2632 Query 2863 TGGAATGCATTGACATATATAGATTAACACAGACCCACACAATTAAAATAAGTCTGAACG 2922 |||||||||| ||||||| ||||||||||||||| |||||||| |||||||||||||||| Sbjct 2633 TGGAATGCATCGACATATTTAGATTAACACAGACTCACACAATCAAAATAAGTCTGAACG 2692 Query 2923 AAGCTTCTCAAGTCAAGCTAAGTGGTTCTTTTGGCAACACTGGTCTTTCCTGA 2975 |||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct 2693 AAGCTTCTCAAGTCAAGCTAAGTGGTTCTTTTGGTAGCACTGGTCTTTCCTGA 2745 > Ahg491122 jgi|Araly1|491122|fgenesh2_kg.7__555__AT4G35270.1 Length=3255 Score = 826 bits (447), Expect = 0.0 Identities = 970/1213 (80%), Gaps = 74/1213 (6%) Strand=Plus/Plus Query 1195 TCTGCAGATCATATGATTTTCCTCTAGCTTTGTCATGGGCGCCGTGTGCTCGGCAAGGGA 1254 ||||||||| |||||| | ||||| ||||| | ||||| ||||||||||||||||| | Sbjct 1070 TCTGCAGATTATATGACCTGCCTCTGGCTTTAACGTGGGCACCGTGTGCTCGGCAAGGCA 1129 Query 1255 AAGTTGGTTCCCGACATTCTGATGAGAACTTCTCTGAGTGTGTTTCAACAATCGATTCTG 1314 ||||||| ||||| |||||||||||||||||| |||||||||||||||| | ||| || Sbjct 1130 AAGTTGGATCCCGCCATTCTGATGAGAACTTCGCTGAGTGTGTTTCAACTGTTGATGATG 1189 Query 1315 CTTG-TTCTGTCCCCGA-CGAACAGAG-CAAAAGTTT-TTGGGAGGCATGCTCTGAACAC 1370 |||| | |||||| || | | ||||| | | ||| | |||||||| ||||||||| Sbjct 1190 CTTGCAT-TGTCCCTGATC-ATCAGAGTCGTCA-TTTCCT-AGAGGCATGTTCTGAACAC 1245 Query 1371 CATCTGCTCCAGGGGGAAGGCATTGTTGGG-AAAGCATTTGAAGCCACCAAACTCTTTTT 1429 |||||||| || ||||||||||||| |||| |||||||| |||| |||||||| ||||| Sbjct 1246 CATCTGCTTCAAGGGGAAGGCATTG-TGGGAAAAGCATTCAAAGCAACCAAACTGTTTTT 1304 Query 1430 TGTGCCCGAAGTGGCCACATTTAGCAAGACTAACTACCCCCTTGCACACCACGCCAAGAT 1489 ||||||||||| |||| ||||||||||| |||||||| ||||||||||| || ||||| Sbjct 1305 CGTGCCCGAAGTAACCACTTTTAGCAAGACCAACTACCCTCTTGCACACCATGCTAAGAT 1364 Query 1490 ATCTGGACTACATGCTGCTTTAGCAGTTCCATT-AAAGAGCAAA-TC--TGGTTTGGTTG 1545 || || |||||||||||| ||||||| || || ||| | |||| || | ||| ||||| Sbjct 1365 CTCAGGTCTACATGCTGCTCTAGCAGTCCCGTTGAAA-AACAAATTCAATAGTTCGGTTG 1423 Query 1546 AGTTTGTGTTGGAATTTTTCTTTCCGAAAGCATGCCTTGACACTGAAGCGCAACAGGAAA 1605 |||||||||| || ||||||||||| ||||| ||||||||||| ||||||||||| |||| Sbjct 1424 AGTTTGTGTTCGAGTTTTTCTTTCCAAAAGCTTGCCTTGACACCGAAGCGCAACAAGAAA 1483 Query 1606 TGCTCAAGTCACTATGTGTGACACTGCAGCAAGATTTCAGGAG-TTCAAATCTTTTCA-T 1663 ||||||||||||| | || ||| || ||||| ||||||||||| || ||||||||||| | Sbjct 1484 TGCTCAAGTCACTGTCTGCGACCCTTCAGCAGGATTTCAGGAGCTT-AAATCTTTTCATT 1542 Query 1664 --CAAAGACCTAGAGTTAGAAGTCGTATTACCTGTAAGAGA-GACAAT-GCTCTTCT-CA 1718 ||||| || ||| ||||||| ||||| || || ||||| || | | | | || | || Sbjct 1543 GATAAAGAGCTTGAGCTAGAAGTTGTATTTCCCGTTAGAGAGGA-AGTAG-T-TTTTGCA 1599 Query 1719 GAAAACCTGCTATGTGGA-GCAGAAACCGTAGAG----T-----C---G---TT-GACAG 1761 || |||| || | | | |||| ||||| |||| | | | || || || Sbjct 1600 GAGAACCCACT-TCTTAACGCAGGAACCGGAGAGAATATGAAACCTTTGCCTTTGGA-AG 1657 Query 1762 AAAT-TCAAATGCAAGAATCCTCATGGATCGCCCACATGATAAAGGCAAACGAGAAGGGT 1820 | || || | | |||| || ||||||||| | ||||||||||||||||| ||||| ||| Sbjct 1658 ATATGTCTCA-GGAAGATTCTTCATGGATCTCACACATGATAAAGGCAAATGAGAAAGGT 1716 Query 1821 AAAGATGTATCACTTTCTTGGGAGTACCAGAAAGAAGATCC--TA-AAGAG---CT-C-T 1872 |||| || ||||||||||||||||| || |||||||| || | ||||| | | | Sbjct 1717 AAAGGCGTGTCACTTTCTTGGGAGTATCAAAAAGAAGAGCCAAAAGAAGAGTTTATGCTT 1776 Query 1873 -CATCTGGCCGGGAGAACAGTCAGCTT-GATCCAGTCCCCAATAATGTTCCTTT-AGAAG 1929 ||||||| |||| |||| |||| || | || || | |||||| || |||| ||||| Sbjct 1777 ACATCTGGATGGGATAACAATCAGATTGGTTCTGGT-CACAATAA-CTTTCTTTCAGAAG 1834 Query 1930 CTGAGCAATTACAGCAA-GCATCAACTCCAGGACTCAGAGTCGACATCGG-TCCAAGCAC 1987 ||||||| || ||| || | |||| | ||||||||||| ||||||| || |||||| Sbjct 1835 CTGAGCAGTTTCAG-AAGGTGTCAAATTCAGGACTCAGAATCGACAT-GGTTCCAAGTTT 1892 Query 1988 AGAATCAGCTTCGACT-G-G-TG-GGGG-A-A-ATATGTTAAGCAGTAGGAGACCAGGGG 2040 ||||||||||| | | | || |||| | | || | || ||||||| |||||||| | Sbjct 1893 TGAATCAGCTTCCTTTGGTGTTGTGGGGCAGACAT-TACTAGGCAGTAGAAGACCAGGTG 1951 Query 2041 AGaaaaaaaGAGCAAAAACAGAAAAGACCATTGGCTTGGAGGTTCTTCGACAATACTTTG 2100 |||| | |||| |||||||||||||||| ||||| || || ||||||||||||||||||| Sbjct 1952 AGAAGAGAAGAACAAAAACAGAAAAGACAATTGGTTTAGAAGTTCTTCGACAATACTTTG 2011 Query 2101 CTGGAAGCCTCAAGGATGCAGCCAAGAGCATTGGTGTTTGTCCAACTACCTTGAAAAGGA 2160 | ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 2012 CAGGAAGCCTCAAAGATGCAGCTAAGAGCATTGGTGTTTGTCCAACTACCTTGAAAAGAA 2071 Query 2161 TATGCAGGCAACATGGAATAATGCGATGGCCCTCCCGAAAAATCAAGAAGGTTGGGCATT 2220 ||||||| ||||| || |||| || ||||| || || || |||||||| || ||||||| Sbjct 2072 TATGCAGACAACACGGGATAACACGGTGGCCTTCTCGGAAGATCAAGAAAGTGGGGCATT 2131 Query 2221 CGTTGAAGAAACTCCAACTAGTTATGGACTCTGTCCAAGGTGCGCAGGGCTCTATCCAAC 2280 | || |||||||||||||| ||||| |||||||| ||||||| || |||||||| |||| Sbjct 2132 CATTAAAGAAACTCCAACTTGTTATAGACTCTGTTCAAGGTGTTCAAGGCTCTATTCAAC 2191 Query 2281 TCGATTCATTCTATACAAGCTTCCCAGAGTTGAA-CTCCCCAAATATGTCTAGCAATGGC 2339 | ||||||||||||||||| |||||||| || || ||||||| |||||||| | | |||| Sbjct 2192 TTGATTCATTCTATACAAGTTTCCCAGAATT-AAGCTCCCCACATATGTCTGGTACTGGC 2250 Query 2340 CCTTCCTTGAAGA 2352 ||||||| |||| Sbjct 2251 ACTTCCTTCAAGA 2263 Score = 333 bits (180), Expect = 5e-90 Identities = 375/466 (80%), Gaps = 26/466 (6%) Strand=Plus/Plus Query 2517 AAGAGAGCTCATAGCGAAGCACA-ACTGCATAATGTGAATCAGGAGGAAACAAAATGT-C 2574 |||||||||| ||||| || | |||||||| |||||||||| ||||| ||| || | Sbjct 2461 AAGAGAGCTCGTAGCG-AGGTGAGACTGCATACCATGAATCAGGATGAAAC-AAA-GTCC 2517 Query 2575 TTG-CAAGAACCCAGAGCCATAAAACATTCAAG-GAGCCTCTTGTTCTT-GATAATTCAT 2631 || | ||||||| |||||| ||||||||| || || | || | || || || ||| || Sbjct 2518 CTGTCTAGAACCCTGAGCCACAAAACATTC-AGTGAACATCCTCTT-TTCGAAAATCCAC 2575 Query 2632 CTCCATTAACAGG-TAGTAGCAACACG-AGTTTAAGAGCTAGAGGTGCCATC-AAAGTGA 2688 ||| || || || ||||| | || | |||| || |||| |||| ||| || ||||||| Sbjct 2576 CTCGGTT-ACCGGAGAGTAGTAGCAGGAAGTTGAA-AGCTGGAGGGGCC-TCAAAAGTGA 2632 Query 2689 AAGCGACATTTGGTGAGGCCAGAA-TACGGTTTACCTTACTCCCGAGTTGGGGCTTC-GC 2746 |||| |||||||||||||||| || |||||||||| || ||||| | ||||||||| | Sbjct 2633 AAGCCACATTTGGTGAGGCCA-AAGTACGGTTTACTTTGCTCCCTACATGGGGCTTCAG- 2690 Query 2747 AGAGCTGAAGCAAGAGATTGCTAGGCGTTTCAACATAGATGACATTTC-CTGGTTTGACC 2805 |||| || |||| ||||||||||||||||| ||||||||| | ||| | | ||||| | Sbjct 2691 AGAGTTGCAGCATGAGATTGCTAGGCGTTTTAACATAGATAATATTGCAC-CCTTTGATC 2749 Query 2806 TTAAGTACCTGGATGATGATAAGGAGTGGGTTCTTCTGACATGTGAAGCGGATCTCGTGG 2865 ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| || Sbjct 2750 TTAAGTACCTGGATGATGACAAGGAATGGGTTCTTCTGACATGTGAAGCGGATCTCGAGG 2809 Query 2866 AATGCATTGACATATATAGATTAACACAGACCCACACAATTAAAATAAGTC-TGAACGAA 2924 |||| || ||||| ||||||| | |||||| || ||| || || ||||| | | | ||| Sbjct 2810 AATGTATCGACATTTATAGATCATCACAGAGCCGCACGATCAAGATAAG-CGTTCATGAA 2868 Query 2925 GCTTCTCAAGTCAAGCTAAGTGGTTCTTTTGGCAACA-CTGGTCTT 2969 |||||||||||||||||| | ||||||||||| | || | |||||| Sbjct 2869 GCTTCTCAAGTCAAGCTAGGAGGTTCTTTTGGTAGCATC-GGTCTT 2913 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 120250903465 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5