BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G17460.1
Length=1057
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481664 jgi|Araly1|481664|fgenesh2_kg.4__724__AT2G17460.1 499 1e-140
Ahg473700 jgi|Araly1|473700|fgenesh2_kg.1__3654__AT1G32505.1 459 2e-128
Ahg479985 jgi|Araly1|479985|fgenesh2_kg.3__2686__AT2G17460.1 455 3e-127
Ahg473336 jgi|Araly1|473336|fgenesh2_kg.1__3290__AT2G17460.1 455 3e-127
Ahg497174 jgi|Araly1|497174|fgenesh2_kg.26__9__AT2G17460.1 444 7e-124
Ahg481538 jgi|Araly1|481538|fgenesh2_kg.4__598__AT2G17460.1 444 7e-124
Ahg484914 jgi|Araly1|484914|fgenesh2_kg.5__906__AT2G17460.1 433 2e-120
> Ahg481664 jgi|Araly1|481664|fgenesh2_kg.4__724__AT2G17460.1
Length=909
Score = 499 bits (270), Expect = 1e-140
Identities = 435/509 (85%), Gaps = 33/509 (6%)
Strand=Plus/Minus
Query 172 CAATCCCATAATTAGTTACTGGAT-ACGGGAGAGATGTTAGTGATGATAGATACTAAACG 230
|||||| ||||||||||||||||| ||||| |||||| |||||||||||| | ||||||
Sbjct 909 CAATCCAATAATTAGTTACTGGATGCCGGGAAAGATGTCAGTGATGATAGAAAGTAAACG 850
Query 231 CCCTCCTGTCTACATTGACAGTCAAGTGAGGGTGGGATACGAttttttttATTCGTGGTG 290
||||||||| |||||||||| |||| | | | | | ||||| ||||||||||
Sbjct 849 CCCTCCTGTATACATTGACAATCAA---A---T--G--A-G---TTTTTGATTCGTGGTG 804
Query 291 GGTATCCTTCTCTCAACTTGTTTGTCTCTTTCATTACAACCGTCAAGACACTCGGGAATA 350
|| ||||| | ||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 803 GGGATCCTAGTGTCACCTTGTTTGTCTCTTTCATTACAACCGTCAAGGCACTCGGGAATA 744
Query 351 ATGTCTCTAGGACTC-ATGGTGACGATGCTGAAAGTGACCGTGTGTGTGATAGTGTTTTA 409
|||| ||||||| | ||||||| || | | | |||||||||||| ||||||| |
Sbjct 743 CTGTCCCTAGGAC-CGATGGTGA-GA-G-T-----T-ACCGTGTGTGTGGGAGTGTTTCA 694
Query 410 AATGTTGATGAAAATAATGAGGCCATAGATTAGTAAGACGA-GATTGAAGACGATAAAAC 468
||||| |||| |||||||||||| ||||| || ||||||| | ||||||||||||||||
Sbjct 693 AATGTAGATGGAAATAATGAGGCTGTAGATGAGCAAGACGACG-TTGAAGACGATAAAAC 635
Query 469 AGATGAGGATGAAGATG-GG-GG-G-ACAACGAAGATGGTGATGGGTATGATGATTATCA 524
||||||||||||||| | || || | ||||||||||||||| ||||||||||||||||||
Sbjct 634 AGATGAGGATGAAGAAGAGGAGGAGGACAACGAAGATGGTGCTGGGTATGATGATTATCA 575
Query 525 GGGTGACGATGGATCTATGGGGG-AAGTACCATCGATCCTACTATTGATGGTAGTGAAAG 583
|||||| |||||||||||||||| ||||||| ||||||||||||| || ||||||||| |
Sbjct 574 GGGTGATGATGGATCTATGGGGGGAAGTACCCTCGATCCTACTATAGACGGTAGTGAAGG 515
Query 584 TAGTGGCGAAGATTATGATTACAACAAGTGGAACGATGAAATTGTAGAAGAATATGGAAT 643
|||||||||||||| ||||||||||||||||||||| |||| | ||||||||||||||
Sbjct 514 CAGTGGCGAAGATTACGATTACAACAAGTGGAACGATTTAATTATTGAAGAATATGGAAT 455
Query 644 AGGGAATGTTGAGGAGAACGTCATTCTCA 672
||| |||||||||||| ||||||||||||
Sbjct 454 AGGAAATGTTGAGGAGGACGTCATTCTCA 426
Score = 460 bits (249), Expect = 7e-129
Identities = 282/298 (95%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 748 CTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGCTGTGACTCCAAGAAGTA 807
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||
Sbjct 297 CTGGCGGAGATAACATTTCTCATTCGGGTGACCGTACACCAACGGTGACTCCAAGACGTA 238
Query 808 TGTGTCAACATGGTTTGTACCAATGTACGTACACTATAGATTGGAGAGTGTTTTTAAGAA 867
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 237 CGTGTCAACATGGTTTGTACCAATGTACGTACACTATAGATTGGAGAGTGTTTTTAAGAA 178
Query 868 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAAT-CTTTTTGCTACA 926
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 177 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAATGCTTTT-GCTACA 119
Query 927 AGCAACCTAGGTCATATCCTACAAGATTGGTGATGGTATGCGTTGATGATACTTGTCCAT 986
|||||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 118 AGCAACGTAGGTCATGTCCTACAAGATTGGAGATGGTCTGCGTTGATGATACTTGTCCAT 59
Query 987 GACATTTGACTGCTCAAGTCGTCAAGAATTCAGAATATTTCAAAATCACATCGTATGA 1044
| |||||||| |||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct 58 GGCATTTGACAGCTCAAGTTGTCAAGAATTCAGAATGTTTCAAAATCACATCGTATGA 1
Score = 84.2 bits (45), Expect = 2e-15
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 785 ACCAGCTGTGACTCCAAGAAGTATGTGTCAACATGGTTTGTACCAATGTACGTACAC 841
|||| | |||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 425 ACCAACGGTGACTCCAAGACGTACGTGTCAACATGGTTTGTACCAATGTACGTACAC 369
> Ahg473700 jgi|Araly1|473700|fgenesh2_kg.1__3654__AT1G32505.1
Length=450
Score = 459 bits (248), Expect = 2e-128
Identities = 337/380 (89%), Gaps = 6/380 (2%)
Strand=Plus/Minus
Query 333 TCAAGACACTCGGGAATAATGTCTCTAGGACTCATGGTGACGATGCTGAAAGTGACCGTG 392
||||| ||||| ||||||||| | |||||||| |||||||||||||||||||||||||||
Sbjct 450 TCAAGGCACTCTGGAATAATGACCCTAGGACTGATGGTGACGATGCTGAAAGTGACCGTG 391
Query 393 TGTGTGATAGTGTTTTAAATGTTGATGAAAATAATGAGGCCATAGATTAGTAAGACGA-G 451
|||||| |||| || |||||| |||| ||||||||||||| ||||| | || |||| |
Sbjct 390 TGTGTGGGAGTGCTTCAAATGTGGATGCAAATAATGAGGCCGTAGATGAACAACACGACG 331
Query 452 ATTGAAGACGATAAAACAGATGAGGATGAAGATGG-GG-GGACAACGAAGATGGTGATGG 509
| |||| ||||||||||||||||||||| | || || ||||| |||||||||||||||
Sbjct 330 -TACAAGATGATAAAACAGATGAGGATGAA-AAGGAGGAGGACACCGAAGATGGTGATGG 273
Query 510 GTATGATGATTATCAGGGTGACGATGGATCTATGGGG-GAAGTACCATCGATCCTACTAT 568
||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||
Sbjct 272 GTATGATGATTATCAGGGTGACGATGGATCTATGGGGAGAAGTACCCTCGATCATACTAT 213
Query 569 TGATGGTAGTGAAAGTAGTGGCGAAGATTATGATTACAACAAGTGGAACGATGAAATTGT 628
|| | ||||||| |||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 212 AGACGATAGTGAATGTAGTGGCGAAGATTACGATTACAACAAGTGGAACGATGTAATTGT 153
Query 629 AGAAGAATATGGAATAGGGAATGTTGAGGAGAACGTCATTCTCACACAGCTGATTGTTCA 688
||||||||||||||||||||||||||||||| ||||||||||||| || | | |||||
Sbjct 152 AGAAGAATATGGAATAGGGAATGTTGAGGAGGACGTCATTCTCACTCAACAAACGGTTCA 93
Query 689 ACATCCAAGGGAATTCAGTC 708
||||||| ||||||||||||
Sbjct 92 ACATCCAGGGGAATTCAGTC 73
> Ahg479985 jgi|Araly1|479985|fgenesh2_kg.3__2686__AT2G17460.1
Length=904
Score = 455 bits (246), Expect = 3e-127
Identities = 281/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 748 CTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGCTGTGACTCCAAGAAGTA 807
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||
Sbjct 297 CTGGCGGAGATAACATTTCTCATTCGGGTGACCGTACACCAACGGTGACTCCAAGACGTA 238
Query 808 TGTGTCAACATGGTTTGTACCAATGTACGTACACTATAGATTGGAGAGTGTTTTTAAGAA 867
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 237 CGTGTCAACATGGTTTGTACCAATGTACGTACACTACAGATTGGAGAGTGTTTTTAAGAA 178
Query 868 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAAT-CTTTTTGCTACA 926
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 177 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAATGCTTTT-GCTACA 119
Query 927 AGCAACCTAGGTCATATCCTACAAGATTGGTGATGGTATGCGTTGATGATACTTGTCCAT 986
|||||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 118 AGCAACGTAGGTCATGTCCTACAAGATTGGAGATGGTCTGCGTTGATGATACTTGTCCAT 59
Query 987 GACATTTGACTGCTCAAGTCGTCAAGAATTCAGAATATTTCAAAATCACATCGTATGA 1044
| |||||||| |||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct 58 GGCATTTGACAGCTCAAGTTGTCAAGAATTCAGAATGTTTCAAAATCACATCGTATGA 1
Score = 278 bits (150), Expect = 7e-74
Identities = 326/402 (81%), Gaps = 47/402 (12%)
Strand=Plus/Minus
Query 172 CAATCCCATAATTAGTTACTGGAT-ACGGGAGAGATGTTAGTGATGATAGATACTAAACG 230
|||||| ||||||||||||||||| ||||| |||||| |||||||||||| | ||||||
Sbjct 904 CAATCCAATAATTAGTTACTGGATGCCGGGAAAGATGTCAGTGATGATAGAAAGTAAACG 845
Query 231 CCCTCCTGTCTACATTGACAGTCAAGTGAGGGTGGGATACGAttttttttATTCGTGGTG 290
||||||||| |||||||||| || | | || || ||||| ||||||||||
Sbjct 844 CCCTCCTGTATACATTGACAATC-A---A-------AT--GA--TTTTTCATTCGTGGTG 800
Query 291 GGTATCCTTCTCTCAACTTGTTTGTCTCTTTCATTACAACCGTCAAGACACTCGGGAATA 350
|| ||||| | ||| |||||||||||| | || | | ||| ||||||||||||
Sbjct 799 GGGATCCTAGTGTCACCTTGTTTGTCTC--T--TT-C-A-----AAG-CACTCGGGAATA 752
Query 351 ATGTCTCTAGGACTC-ATGGTGACGATGCTGAAAGTGACCGTGTGTGTGATAGTGTTTTA 409
|||| ||||||| | ||||||| || | | | |||||||||||| |||| || |
Sbjct 751 CTGTCCCTAGGAC-CGATGGTGA-GA-G-T-----T-ACCGTGTGTGTGGGAGTGCTTCA 702
Query 410 AATGTTGATGAAAATAATGAGGCCATAGATTAGTAAGACGA-GATTGAAGACGATAAAAC 468
||||| |||| ||||||||||||| ||||| || ||||||| | ||||||||||||||||
Sbjct 701 AATGTAGATGGAAATAATGAGGCCGTAGATGAGCAAGACGACG-TTGAAGACGATAAAAC 643
Query 469 AGATGAGGATGAAGATG-GG-GG-G-ACAACGAAGATGGTGATGGGTATGATGATTATCA 524
||||||||||||||| | || || | ||||||||||||||| ||||||||||||||||||
Sbjct 642 AGATGAGGATGAAGAAGAGGAGGAGGACAACGAAGATGGTGCTGGGTATGATGATTATCA 583
Query 525 GGGTGACGATGGATCTATGGGGG--AAGTACCATCGATCCTA 564
|||||| |||||||||||||||| ||||||| |||||||||
Sbjct 582 GGGTGATGATGGATCTATGGGGGGGAAGTACCCTCGATCCTA 541
Score = 111 bits (60), Expect = 8e-24
Identities = 97/113 (86%), Gaps = 9/113 (8%)
Strand=Plus/Minus
Query 728 GTACACAAGTCAGCGTGTACCTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACC 787
|||||||||||| ||||||||||| |||||| | | || ||| ||||||||||||
Sbjct 473 GTACACAAGTCATCGTGTACCTGGGGGAGAT-A-A---CT----CGGTTGACCGTACACC 423
Query 788 AGCTGTGACTCCAAGAAGTATGTGTCAACATGGTTTGTACCAATGTACGTACA 840
| | |||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 422 AACGGTGACTCCAAGACGTACGTGTCAACATGGTTTGTACCAATGTACGTACA 370
Score = 97.1 bits (52), Expect = 2e-19
Identities = 62/67 (93%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 606 AACAAGTGGAACGATGAAATTGTAGAAGAATATGGAATAGGGAATGTTGAGGAGAACGTC 665
||||||||||||||| |||| | |||||||||||||||||||||||||||||| |||||
Sbjct 540 AACAAGTGGAACGATTTAATTATTGAAGAATATGGAATAGGGAATGTTGAGGAGGACGTC 481
Query 666 ATTCTCA 672
|||||||
Sbjct 480 ATTCTCA 474
> Ahg473336 jgi|Araly1|473336|fgenesh2_kg.1__3290__AT2G17460.1
Length=829
Score = 455 bits (246), Expect = 3e-127
Identities = 281/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 748 CTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGCTGTGACTCCAAGAAGTA 807
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||
Sbjct 297 CTGGCGGAGATAACATTTCTCATTCGGGTGACCGTACACCAACGGTGACTCCAAGACGTA 238
Query 808 TGTGTCAACATGGTTTGTACCAATGTACGTACACTATAGATTGGAGAGTGTTTTTAAGAA 867
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 237 CGTGTCAACATGGTTTGTACCAATGTACGTACACTACAGATTGGAGAGTGTTTTTAAGAA 178
Query 868 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAAT-CTTTTTGCTACA 926
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 177 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAATGCTTTT-GCTACA 119
Query 927 AGCAACCTAGGTCATATCCTACAAGATTGGTGATGGTATGCGTTGATGATACTTGTCCAT 986
|||||| |||||||| ||||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 118 AGCAACGTAGGTCATGTCCTAAAAGATTGGAGATGGTCTGCGTTGATGATACTTGTCCAT 59
Query 987 GACATTTGACTGCTCAAGTCGTCAAGAATTCAGAATATTTCAAAATCACATCGTATGA 1044
| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 58 GGCATTTGACAGCTCAAGTTGTCAAGAATTCAGAATATTTCAAAATCACATCGTATGA 1
Score = 102 bits (55), Expect = 5e-21
Identities = 94/111 (85%), Gaps = 9/111 (8%)
Strand=Plus/Minus
Query 731 CACAAGTCAGCGTGTACCTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGC 790
||||||||| ||||||| ||| |||||| | | || ||| ||||||||||||| |
Sbjct 470 CACAAGTCATCGTGTACGTGGGGGAGAT-A-A---CT----CGGTTGACCGTACACCAAC 420
Query 791 TGTGACTCCAAGAAGTATGTGTCAACATGGTTTGTACCAATGTACGTACAC 841
|||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 419 GGTGACTCCAAGACGTACGTGTCAACATGGTTTGTACCAATGTACGTACAC 369
> Ahg497174 jgi|Araly1|497174|fgenesh2_kg.26__9__AT2G17460.1
Length=842
Score = 444 bits (240), Expect = 7e-124
Identities = 279/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 748 CTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGCTGTGACTCCAAGAAGTA 807
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||
Sbjct 297 CTGGCGGAGATAACATTTCTCATTCGGGTGACCGTACACCAACGGTGACTCCAAGACGTA 238
Query 808 TGTGTCAACATGGTTTGTACCAATGTACGTACACTATAGATTGGAGAGTGTTTTTAAGAA 867
||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 237 CGTGTCAACATGGTTTGTACCAATGTACATACACTACAGATTGGAGAGTGTTTTTAAGAA 178
Query 868 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAAT-CTTTTTGCTACA 926
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 177 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAATGCTTTT-GCTACA 119
Query 927 AGCAACCTAGGTCATATCCTACAAGATTGGTGATGGTATGCGTTGATGATACTTGTCCAT 986
|||||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 118 AGCAACATAGGTCATGTCCTACAAGATTGGAGATGGTCTGCGTTGATGATACTTGTCCAT 59
Query 987 GACATTTGACTGCTCAAGTCGTCAAGAATTCAGAATATTTCAAAATCACATCGTATGA 1044
| |||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||
Sbjct 58 GGCATTTGACAGCTCAAGTTGTCAACAATTCAGAATGTTTCAAAATCACATCGTATGA 1
Score = 350 bits (189), Expect = 2e-95
Identities = 334/398 (84%), Gaps = 33/398 (8%)
Strand=Plus/Minus
Query 172 CAATCCCATAATTAGTTACTGGAT-ACGGGAGAGATGTTAGTGATGATAGATACTAAACG 230
|||||| ||||||||||||||||| ||||| |||||| |||||||||||| | |||| |
Sbjct 842 CAATCCAATAATTAGTTACTGGATGCCGGGAAAGATGTCAGTGATGATAGAAAGTAAATG 783
Query 231 CCCTCCTGTCTACATTGACAGTCAAGTGAGGGTGGGATACGAttttttttATTCGTGGTG 290
||||||||| |||||||||| |||| | | | | | ||||| ||||||||||
Sbjct 782 CCCTCCTGTATACATTGACAATCAA---A---T--G--A-G---TTTTTGATTCGTGGTG 737
Query 291 GGTATCCTTCTCTCAACTTGTTTGTCTCTTTCATTACAACCGTCAAGACACTCGGGAATA 350
|| ||||| | ||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 736 GGGATCCTAGTGTCACCTTGTTTGTCTCTTTCATTACAACCGTCAAGGCACTCGGGAATA 677
Query 351 ATGTCTCTAGGACTC-ATGGTGACGATGCTGAAAGTGACCGTGTGTGTGATAGTGTTTTA 409
|||| ||||||| | ||||||| || | | | |||||||||||| |||| || |
Sbjct 676 CTGTCCCTAGGAC-CGATGGTGA-GA-G-T-----T-ACCGTGTGTGTGGGAGTGCTTCA 627
Query 410 AATGTTGATGAAAATAATGAGGCCATAGATTAGTAAGACGA-GATTGAAGACGATAAAAC 468
||||| |||| ||||||||||||| ||||| || ||||||| | ||||||||||||||||
Sbjct 626 AATGTAGATGGAAATAATGAGGCCGTAGATGAGCAAGACGACG-TTGAAGACGATAAAAC 568
Query 469 AGATGAGGATGAAGATG-GG-GG-G-ACAACGAAGATGGTGATGGGTATGATGATTATCA 524
||||||||||||||| | || || | ||||||||||||||| ||||||||||||||||||
Sbjct 567 AGATGAGGATGAAGAAGAGGAGGAGGACAACGAAGATGGTGCTGGGTATGATGATTATCA 508
Query 525 GGGTGACGATGGATCTATGGGGG-AAGTACCATCGATC 561
|||||| |||||||||||||||| ||||||| ||||||
Sbjct 507 GGGTGATGATGGATCTATGGGGGGAAGTACCCTCGATC 470
Score = 100 bits (54), Expect = 2e-20
Identities = 93/110 (85%), Gaps = 9/110 (8%)
Strand=Plus/Minus
Query 731 CACAAGTCAGCGTGTACCTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGC 790
||||||||| ||||||| ||| |||||| | | || ||| ||||||||||||| |
Sbjct 470 CACAAGTCATCGTGTACGTGGGGGAGAT-A-A---CT----CGGTTGACCGTACACCAAC 420
Query 791 TGTGACTCCAAGAAGTATGTGTCAACATGGTTTGTACCAATGTACGTACA 840
|||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 419 GGTGACTCCAAGACGTACGTGTCAACATGGTTTGTACCAATGTACGTACA 370
> Ahg481538 jgi|Araly1|481538|fgenesh2_kg.4__598__AT2G17460.1
Length=829
Score = 444 bits (240), Expect = 7e-124
Identities = 279/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 748 CTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGCTGTGACTCCAAGAAGTA 807
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||
Sbjct 297 CTGGCGGAGATAACATTTCTCATTCGGGTGACCGTACACCAACGGTGACTCCAAGACGTA 238
Query 808 TGTGTCAACATGGTTTGTACCAATGTACGTACACTATAGATTGGAGAGTGTTTTTAAGAA 867
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 237 CGTGTCAACATGGTTTGTACCAATGTACGTACACTACAGATTGGAGAGTGTTTTTAAGAA 178
Query 868 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAAT-CTTTTTGCTACA 926
|||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||
Sbjct 177 CAGAAAAGTCATACAACAAATAATGTCTTATCTCGCAATCAAACAATGCTTTT-GCTACA 119
Query 927 AGCAACCTAGGTCATATCCTACAAGATTGGTGATGGTATGCGTTGATGATACTTGTCCAT 986
|||||| |||||||| ||||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 118 AGCAACGTAGGTCATGTCCTAAAAGATTGGAGATGGTCTGCGTTGATGATACTTGTCCAT 59
Query 987 GACATTTGACTGCTCAAGTCGTCAAGAATTCAGAATATTTCAAAATCACATCGTATGA 1044
| |||||||| |||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct 58 GGCATTTGACAGCTCAAGTTGTCAAGAATTCAGAATGTTTCAAAATCACATCGTATGA 1
Score = 272 bits (147), Expect = 3e-72
Identities = 322/398 (81%), Gaps = 46/398 (12%)
Strand=Plus/Minus
Query 172 CAATCCCATAATTAGTTACTGGAT-ACGGGAGAGATGTTAGTGATGATAGATACTAAACG 230
|||||| ||||||||||||||||| ||||| |||||| |||||||||||| | ||||||
Sbjct 829 CAATCCAATAATTAGTTACTGGATGCCGGGAAAGATGTCAGTGATGATAGAAAGTAAACG 770
Query 231 CCCTCCTGTCTACATTGACAGTCAAGTGAGGGTGGGATACGAttttttttATTCGTGGTG 290
||||||||| |||||||||| || | | || || ||||| ||||||||||
Sbjct 769 CCCTCCTGTATACATTGACAATC-A---A-------AT--GA--TTTTTGATTCGTGGTG 725
Query 291 GGTATCCTTCTCTCAACTTGTTTGTCTCTTTCATTACAACCGTCAAGACACTCGGGAATA 350
|| ||||| | ||| |||||||||||| | || ||| | | ||||||||||||
Sbjct 724 GGGATCCTAGTGTCACCTTGTTTGTCTC--T--TT-CAA--G----G-CACTCGGGAATA 677
Query 351 ATGTCTCTAGGACTC-ATGGTGACGATGCTGAAAGTGACCGTGTGTGTGATAGTGTTTTA 409
|||| ||||||| | ||||||| || | | | |||||||||||| |||| || |
Sbjct 676 CTGTCCCTAGGAC-CGATGGTGA-GA-G-T-----T-ACCGTGTGTGTGGGAGTGCTTCA 627
Query 410 AATGTTGATGAAAATAATGAGGCCATAGATTAGTAAGACGA-GATTGAAGACGATAAAAC 468
||||| |||| ||||||||||||| ||||| || ||||||| | ||||||||||||||||
Sbjct 626 AATGTAGATGGAAATAATGAGGCCGTAGATGAGCAAGACGACG-TTGAAGACGATAAAAC 568
Query 469 AGATGAGGATGAAGATG-GG-GG-G-ACAACGAAGATGGTGATGGGTATGATGATTATCA 524
||||||||||||||| | || || | | ||||||||||||| ||||||||||||||||||
Sbjct 567 AGATGAGGATGAAGAAGAGGAGGAGGAAAACGAAGATGGTGCTGGGTATGATGATTATCA 508
Query 525 GGGTGACGATGGATCTATGGGGG-AAGTACCATCGATC 561
|||||| |||||||||||||||| ||||||| ||||||
Sbjct 507 GGGTGATGATGGATCTATGGGGGGAAGTACCCTCGATC 470
Score = 102 bits (55), Expect = 5e-21
Identities = 94/111 (85%), Gaps = 9/111 (8%)
Strand=Plus/Minus
Query 731 CACAAGTCAGCGTGTACCTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGC 790
||||||||| ||||||| ||| |||||| | | || ||| ||||||||||||| |
Sbjct 470 CACAAGTCATCGTGTACGTGGGGGAGAT-A-A---CT----CGGTTGACCGTACACCAAC 420
Query 791 TGTGACTCCAAGAAGTATGTGTCAACATGGTTTGTACCAATGTACGTACAC 841
|||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 419 GGTGACTCCAAGACGTACGTGTCAACATGGTTTGTACCAATGTACGTACAC 369
> Ahg484914 jgi|Araly1|484914|fgenesh2_kg.5__906__AT2G17460.1
Length=878
Score = 433 bits (234), Expect = 2e-120
Identities = 277/298 (93%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 748 CTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGCTGTGACTCCAAGAAGTA 807
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||
Sbjct 297 CTGGCGGAGATAACATTTCTCATTCGGGTGACCGTACACCAACCGTGACTCCAAGACGTA 238
Query 808 TGTGTCAACATGGTTTGTACCAATGTACGTACACTATAGATTGGAGAGTGTTTTTAAGAA 867
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 237 CGTGTCAACATGGTTTGTACCAATGTACGTACACTACAGATTGGAGAGTGTTTTTAAGAG 178
Query 868 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAAT-CTTTTTGCTACA 926
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 177 CAGAAAAGTCATACAACAAACAATGTCTTATCTCGCAATCAAACAATGCTTTT-GCTACA 119
Query 927 AGCAACCTAGGTCATATCCTACAAGATTGGTGATGGTATGCGTTGATGATACTTGTCCAT 986
|||||| |||||||| |||||||||||||| |||||| ||||||||||||| || |||||
Sbjct 118 AGCAACGTAGGTCATGTCCTACAAGATTGGAGATGGTCTGCGTTGATGATATTTTTCCAT 59
Query 987 GACATTTGACTGCTCAAGTCGTCAAGAATTCAGAATATTTCAAAATCACATCGTATGA 1044
| |||||||| |||||||| |||||||||||| ||| |||||||||||||||||||||
Sbjct 58 GGCATTTGACAGCTCAAGTTGTCAAGAATTCATAATGTTTCAAAATCACATCGTATGA 1
Score = 355 bits (192), Expect = 3e-97
Identities = 336/399 (84%), Gaps = 35/399 (9%)
Strand=Plus/Minus
Query 172 CAATCCCATAATTAGTTACTGGAT-ACGGGAGAGATGTTAGTGATGATAGATACTAAACG 230
|||||| ||||||||||||||||| ||||| |||||| |||||||||||| | ||||||
Sbjct 878 CAATCCAATAATTAGTTACTGGATGCCGGGAAAGATGTCAGTGATGATAGAAAGTAAACG 819
Query 231 CCCTCCTGTCTACATTGACAGTCAAGTGAGGGTGGGATACGAttttttttATTCGTGGTG 290
|||||||||||||||||||| |||| | | | | | ||||| ||||||||||
Sbjct 818 CCCTCCTGTCTACATTGACAATCAA---A---T--G--A-G---TTTTTGATTCGTGGTG 773
Query 291 GGTATCCTTCTCTCAACTTGTTTGTCTCTTTCATTACAACCGTCAAGACACTCGGGAATA 350
|| ||||| | ||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 772 GGGATCCTAGTGTCACCTTGTTTGTCTCTTTCATTACAACCGTCAAGGCACTCGGGAATA 713
Query 351 ATGTCTCTAGGACTC-ATGGTGACGATGCTGAAAGTGACCGTGTGTG-TGATAGTGTTTT 408
|||| ||||||| | ||||||| || | | | |||||||||| || |||| ||
Sbjct 712 CTGTCCCTAGGAC-CGATGGTGA-GA-G-T-----T-ACCGTGTGTGTTG-GAGTGCTTC 664
Query 409 AAATGTTGATGAAAATAATGAGGCCATAGATTAGTAAGACGA-GATTGAAGACGATAAAA 467
|||||| |||| ||||||||||||| ||||| || ||||||| | |||||||||||||||
Sbjct 663 AAATGTAGATGGAAATAATGAGGCCGTAGATGAGCAAGACGACG-TTGAAGACGATAAAA 605
Query 468 CAGATGAGGATGAAGATG-GG-GG-G-ACAACGAAGATGGTGATGGGTATGATGATTATC 523
|||||||||||||||| | || || | ||||||||||||||| |||||||||||||||||
Sbjct 604 CAGATGAGGATGAAGAAGAGGAGGAGGACAACGAAGATGGTGCTGGGTATGATGATTATC 545
Query 524 AGGGTGACGATGGATCTATGGGGG-AAGTACCATCGATC 561
||||||| |||||||||||||||| ||||||| ||||||
Sbjct 544 AGGGTGATGATGGATCTATGGGGGGAAGTACCCTCGATC 506
Score = 102 bits (55), Expect = 5e-21
Identities = 94/111 (85%), Gaps = 9/111 (8%)
Strand=Plus/Minus
Query 731 CACAAGTCAGCGTGTACCTGGCGGAGATAACATTTCTCACCCGGGTGACCGTACACCAGC 790
||||||||| ||||||| ||| |||||| | | || ||| ||||||||||||| |
Sbjct 506 CACAAGTCATCGTGTACGTGGGGGAGAT-A-A---CT----CGGTTGACCGTACACCAAC 456
Query 791 TGTGACTCCAAGAAGTATGTGTCAACATGGTTTGTACCAATGTACGTACAC 841
|||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 455 GGTGACTCCAAGACGTACGTGTCAACATGGTTTGTACCAATGTACGTACAC 405
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 39342850344
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5