BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G18100.1
Length=2377
Score E
Sequences producing significant alignments: (Bits) Value
Ahg480715 jgi|Araly1|480715|fgenesh2_kg.3__3416__AT2G18100.1 3186 0.0
Ahg944253 jgi|Araly1|944253|scaffold_700482.1 1371 0.0
> Ahg480715 jgi|Araly1|480715|fgenesh2_kg.3__3416__AT2G18100.1
Length=2307
Score = 3186 bits (1725), Expect = 0.0
Identities = 1959/2073 (95%), Gaps = 12/2073 (1%)
Strand=Plus/Plus
Query 227 TACCGGAGAGCCAATCAGCAGCGACAGTGATCCTATCTCCGATGAGGCGGATCTCTGGGT 286
|||| |||||||||||||||||||| ||||||||||||||||||| |||||||| |||||
Sbjct 211 TACCAGAGAGCCAATCAGCAGCGACGGTGATCCTATCTCCGATGACGCGGATCTTTGGGT 270
Query 287 CCACGAAGTTTCCGGCCTCCTCCGTCCTGTTCTCAGATGTCTTCAGATTGATTCATCAGC 346
||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||
Sbjct 271 CCACGAAGTTTCCGGCCTCATCCGACCTGTTTTCAGATGTCTTCAGATTGATTCCTCAGC 330
Query 347 TTGGCATGGCCTTGAAGAGATAGCTGCTTCTACTCAGGCTAAGGATCACATCGGTGCGTT 406
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 331 TTGGCATGGCCTTGAGGAGATATCTGCTTCTACTCAGGCTAAGGATCACATCGGTGCGTT 390
Query 407 TATCAAGTTACTCTCAGAGGATGTGAGTGATGATGATGATGATTCTAGTGAAATGGTGGA 466
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 391 CATCAAGTTACTCTCAGAGGATGTGAGTGATGATGATGATAATTCTAGTGAAATGGTGGA 450
Query 467 GAAAGAGACCGCCTTAGCTAAAGCTGCTGATGCTATGGATCAAAACATTCGAAGCAGCTC 526
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct 451 GAAAGAGACCGCCTTAGCTAAAGCTGCTGAAGCTATGGTTCAAAACATTCGAAGCAGCTC 510
Query 527 TCTATCTGTGGAATCTAAGATGGAGAAACATGTGGAATTCGAAAACGAATGCCGCGACAA 586
| ||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 511 TGTATCTGTGGAAGCTAAGATGGAGAAACATGTGGAATTCGAAAACGAATGCCGTGAGAA 570
Query 587 GTATTCTGTTCCCGAGGCACAGTCTGGTGCTGAGGTTAAGGAAACGGAGAGCCACGGGGA 646
||||| ||||||||||| ||||||||||||||||||||||||| ||||||||| ||| |
Sbjct 571 GTATTATGTTCCCGAGGTACAGTCTGGTGCTGAGGTTAAGGAAGTGGAGAGCCATGGGCA 630
Query 647 GGGTGAAATTAGAGATGGAGGCCACAATCTTGGGATTGTTGAACATGAGAAACCTGTTGG 706
| ||||| ||| ||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct 631 GAGTGAAGTTAAAGATGGAGGTCATAATCCTGGGATTGTTGAACATGAGAAACCTGTTGG 690
Query 707 GGAAGTAGCATTGCTTAGCCATGAGAGAAAGATAAATGTTCTTTACGAGCTACTATCTGC 766
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 691 GGAAGTAGCATTGCTTAGCCATGAGAGGAAGATAAATGTTCTTTACGAGCTACTTTCTGC 750
Query 767 TTGCTTGGCAGATAAACATGAGGAGAATGAGATATGTACACGGCGTAGGAAAGGCTATGA 826
|||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||
Sbjct 751 TTGCTTGGCAGATAAACATGAGGAAAACGAGAAATGTACACGGCGTAGGAAAGGCTATGA 810
Query 827 TGCGCGTCACCATGTTGCTCTGCGGTTACTTGCTACTTGGTTTGACTTTCAGTGGATTAA 886
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 811 TGCGCGTCACCATGTTGCTCTGCGGTTACTTGCTACGTGGTTTGACTTTCAGTGGATTAA 870
Query 887 AATGGAAGCAGTTGAGACAATGTCTGCATGCTCTGCCATGGCATTGCAAAAGTCAAGTGG 946
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 871 AATGGAAGCAGTTGAAACGATGTCTGCATGCTCTGCCATGGCATTGCAAAAGTCAAGTGG 930
Query 947 AAATAAGGAAGAAGAGTCTTTGTCACCAAATAGTGAATGGGCTAAGTGGAAACGTGGAGG 1006
| ||||||||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||
Sbjct 931 ATATAAGGAAGAAGAGTCTCTGTCACCAACTAGTGAATGGGCTAAATGGAAGCGTGGAGG 990
Query 1007 CATAGTTGGAGCGGCTGCTTTAACAGGGGGTACATTGATGGCCATCACTGGTGGATTGGC 1066
||| |||||||||||||||||||||||||| || ||||||||||||||||| ||||||||
Sbjct 991 CATCGTTGGAGCGGCTGCTTTAACAGGGGGCACTTTGATGGCCATCACTGGGGGATTGGC 1050
Query 1067 TGCTCCAGCAATAGCTGCAGGGTTCGGTGCATTGGCTCCAACTCTAGGCACAATAGTTCC 1126
|||||||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct 1051 TGCTCCAGCAATCGCTGCAGGGTTCGGTGCATTGGCACCAACACTAGGCACGATGGTTCC 1110
Query 1127 GGTAATTGGAGCCAGTGGGTTTGCTGCAGCTGCTGAGGCTGCCGGAACTGTTGCTGGTTC 1186
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1111 GGTAATTGGAGCCAGTGGGTTTGCTGCAGCTGCTGAGGCTGCGGGAACTGTTGCTGGTTC 1170
Query 1187 TGTTGCTGTTGCAGCATCTTTTGGAGCTGCTGGAGCTGGGCTCACTGGGACGAAGATGGC 1246
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1171 TGTTGCTGTTGCAGCATCTTTTGGAGCTGCTGGAGCTGGGCTCACAGGGACTAAGATGGC 1230
Query 1247 TAGGAGAACTGGTGACATTGAAGAGTTTGAATTCAAAGCTATTGGAGAAAATCATAATCA 1306
|||||||||||| |||||||| ||||||||||| ||||| |||||||||||||| |||||
Sbjct 1231 TAGGAGAACTGGGGACATTGAGGAGTTTGAATTTAAAGCCATTGGAGAAAATCACAATCA 1290
Query 1307 AGGACGATTAGCGGTGGAGATCTTAGTTGCTGGCTTTGTTTTAAAGGAAGAAGACTTTGT 1366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1291 AGGACGATTAGCGGTGGAGATCTTAGTTGCTGGCTTTGTTTTAAAGGAAGAAGACTTTGT 1350
Query 1367 AAAACCCTGGGAAGGGTTAACTAGCAACCTAGAAAGGTACACGGTGCAATGGGAATCCGA 1426
|||||||||||| ||||||||||||||| | |||||||| |||||||| ||||||||| |
Sbjct 1351 AAAACCCTGGGAGGGGTTAACTAGCAACTTGGAAAGGTATACGGTGCATTGGGAATCCAA 1410
Query 1427 GAATATTATTGCAGTGAGCACTGCAATTCAGGATTGGCTTACTTCAAGAGTTGCTATGGA 1486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1411 GAATATTATTGCAGTGAGCACTGCAATTCAGGATTGGCTTACTTCAAGAGTTGCTATGGA 1470
Query 1487 GTTGATGAGACAAGGTGCAATGCGCACCGTACTAAACTCGCTTTTAGCAGCAATGGTTTG 1546
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1471 GTTGATGAGACAAGGTGCAATGCACACCGTACTAAACTCGCTTTTAGCAGCAATGGCATG 1530
Query 1547 GCCGGCAACAATCCTTGTAGCTGCTGATTTTATAGATAGTAGATGGAGTATTGCTATTGA 1606
|||||| ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||
Sbjct 1531 GCCGGCTACAATCCTTGTAGCTGCTGATTTCATAGATAGTAAATGGAGTATCGCTATTGA 1590
Query 1607 CAGGTCAGACAAAGCAGGGAAGCTTCTTGCTGAAGCGCTTCGAAAAGGGTTGCAAGGAAA 1666
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1591 CAGGTCAGACAAAGCAGGAAAACTTCTTGCTGAAGCGCTTCGAAAAGGGTTGCAAGGAAA 1650
Query 1667 TAGACCTGTGACTCTGGTTGGTTTTTCGCTTGGTGCACGTGTTGTCTTTAAGTGCCTCCA 1726
||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1651 TAGACCTGTGACTCTCGTTGGTTTTTCGCTTGGTGCGCGTGTCGTCTTTAAGTGCCTCCA 1710
Query 1727 GACTCTGG-CAGAGACTGAAAAGAATGCTGAAATTGTGGAAAGAGTTGTTCTTCTTGGAG 1785
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1711 GACTCTGGTC-GAGACTGAAAAGAATGCTGAAATTGTGGAAAGAGTTGTTCTTCTTGGAG 1769
Query 1786 CACCAATTTCAATCAAGAATGAGAATTGGCGAGACGTAAGAAAGATGGTGGCTGGAAGAT 1845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1770 CACCAATTTCAATCAAGAATGAGAATTGGCGAGACGTAAGAAAGATGGTGGCTGGAAGAT 1829
Query 1846 TCATTAATGTTTACGCCACAAATGACTGGACCCTCGGAGTTGCATTTCGTGCAAGTCTGT 1905
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 1830 TCATTAATGTTTACGCCACAAATGATTGGACCCTTGGAGTTGCATTTCGTGCAAGTCTGT 1889
Query 1906 TGTCCCAAGGATTAGCTGGAATCCAACCGGTCTGTATACCGGGGATTGAAGATGTAGATG 1965
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 1890 TGTCCCAAGGATTAGCTGGAATCCAACCGGTCTGTATACCGGGGATCGAAGATGTGGATG 1949
Query 1966 TAACGGATATGGTGGAAGGTCACTCATCTTACCTATGGAAAACTCAACAAATCCTGGAAA 2025
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1950 TAACCGATATGGTGGAAGGTCACTCATCTTACCTATGGAAAACTCAACATATCCTGGAAA 2009
Query 2026 GACTCGAACTCGACAATTCTTACCCTGTTTTTCGAAACACTCTCTAACTAAACCCAACAT 2085
|||||||||||| ||| |||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 2010 GACTCGAACTCGTCAACTCTTACCCCGTTTTTCGAGACACTCTCTAACTAAACCCAACAT 2069
Query 2086 TTATTACTAGGACCATATCCCATTTTCACCCAGT-TTCATAGACTAGAT-T-A--ACC-C 2139
|||||| ||||| ||||||||||||||| ||| | |||||| ||||||| | | | | |
Sbjct 2070 TTATTATTAGGATCATATCCCATTTTCATCCA-TATTCATACACTAGATCTGATTAACAC 2128
Query 2140 TCATGACTGCTGAATCAGGTAAAACGAAACATCATTGCCCTTCTTCTCTCATTTTCTCCT 2199
||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||
Sbjct 2129 TCATGACTGCTGAATCAGGCAACACGAAACATCATTTCCCTTCTTCTCTCATTTTCTCCT 2188
Query 2200 CATGTGCGTATATATTATACACT-TCCACATTCCCACAATTGTTTACATGAAAACTTCCC 2258
|| ||||||| | |||||||||| || |||||||||||||| |||||||||||| |||||
Sbjct 2189 CAGGTGCGTACAAATTATACACTATC-ACATTCCCACAATTCTTTACATGAAAAGTTCCC 2247
Query 2259 TCATTTT-GAAACCCTACATGTTCTAATTTTTT 2290
||||||| |||||||||||||||||| ||||||
Sbjct 2248 TCATTTTTGAAACCCTACATGTTCTAGTTTTTT 2280
> Ahg944253 jgi|Araly1|944253|scaffold_700482.1
Length=1693
Score = 1371 bits (742), Expect = 0.0
Identities = 1214/1440 (84%), Gaps = 40/1440 (3%)
Strand=Plus/Plus
Query 654 ATTAGAGATGGAGGCCACAATCTTGGGA-TTGTTGAACATGAGAAACCTGTTGGGGAAGT 712
|||| ||||||| ||||||| | | | | || ||||| |||||||| |||||| ||||||
Sbjct 255 ATTATAGATGGAAGCCACAAGCCT-GAAGTTCTTGAAAATGAGAAATCTGTTGAGGAAGT 313
Query 713 AGCATTGCTTAGCCATGAGAGAAAGATAAATGTTCTTTACGAGCTACTATCTGCTTGCTT 772
| |||||||||||||| |||| ||||||||||||||||| |||||||| |||||||||||
Sbjct 314 AACATTGCTTAGCCATCAGAGGAAGATAAATGTTCTTTATGAGCTACTTTCTGCTTGCTT 373
Query 773 GGCAGATAAACATGAGGAGAATGAGATATGTACACGGCGTAGGAAAGGCTATGATGCGCG 832
| |||| |||||| | ||| || | | ||||| ||||||||| |||||||||||||||||
Sbjct 374 GTCAGACAAACATCAAGAGGATAATAAATGTAAACGGCGTAGAAAAGGCTATGATGCGCG 433
Query 833 TCACCATGTTGCTCTGCGGTTACTTGCTACTTGGTTTGACTTTCAGTGGATTAAAATGGA 892
||||| ||||||||| || |||||||| || |||||| || || ||||||||||| ||||
Sbjct 434 TCACCGTGTTGCTCTCCGTTTACTTGCGACCTGGTTTAACATTGAGTGGATTAAAGTGGA 493
Query 893 AGCAGTTGAGACAAT-GTCTGCATGCTCTGCCATGGC-ATTGCAAAAGTCAAG-TGGAAA 949
|||| |||||||||| ||| ||||||||||||||||| ||| || ||||| | | ||||
Sbjct 494 AGCAATTGAGACAATGGTC-GCATGCTCTGCCATGGCTATT-CAGAAGTC-TGCT-GAAA 549
Query 950 T-AAGGAAGAAGAGT-CTTTGTC-ACCAAATAGTGAATGGGCTAAGTGGAAACGTGGAGG 1006
| |||| ||||| | || |||| || | | | | ||||||||||||||| ||||||||
Sbjct 550 TGAAGGGTGAAGA-TGCTCTGTCTACTACA-ACTTCATGGGCTAAGTGGAAGCGTGGAGG 607
Query 1007 CAT-AGTTGGAGCGGCTGCT-TTAACAGGGGGTACATTGATGGCCATCACTGGTGGATTG 1064
||| | |||| || |||||| || |||||||| || ||||||||||||||||||||||||
Sbjct 608 CATCA-TTGGTGCCGCTGCTATT-ACAGGGGGCACTTTGATGGCCATCACTGGTGGATTG 665
Query 1065 GCTGCTCCAGCAATAGCTGCAGGGTTCGGTGCATTGGCTCCAACTCTAGGCACAAT-AGT 1123
||||||||||| || ||||||||||| ||||||||||| ||||| || |||||| | | |
Sbjct 666 GCTGCTCCAGCTATTGCTGCAGGGTTTGGTGCATTGGCACCAACACTGGGCACACTTA-T 724
Query 1124 TCCGGTAATTGGAGCCAGTGGGTTTGCTGCAGCTGCTGAG-GCTGCCGGAACTGTTGCTG 1182
||||| |||||||| ||||||||||||| || ||| || || || |||||||||||||
Sbjct 725 ACCGGTGATTGGAGCTGGTGGGTTTGCTGCTGCAGCT-AGTGCCGCTGGAACTGTTGCTG 783
Query 1183 GTTCTGTTGCTGTTGCAGCATCTTTTGGAGCTGCTGGAGCTGGGCTCACTGGGACGAAGA 1242
| || ||||| ||||||||||| |||||||||||||||||||| ||||| ||||| ||||
Sbjct 784 GCTCCGTTGCGGTTGCAGCATCGTTTGGAGCTGCTGGAGCTGGTCTCACAGGGACTAAGA 843
Query 1243 TGGCTAGGAGAACTGGTGACATTGAAGAGTTTGAATTCAAAGCTATTGGAGAAAATCATA 1302
|||| ||||||| ||| ||| |||| ||||| ||||| ||||||||||| ||||||||||
Sbjct 844 TGGCAAGGAGAATTGGGGACCTTGATGAGTTCGAATTTAAAGCTATTGGCGAAAATCATA 903
Query 1303 ATCAAGGACGATTAGCGGTGGA-GATCTTAGTTGCTGGCT-TTGTTTTA-AAGGAAGAAG 1359
|||||||||| ||||| ||||| | |||| |||||||| | ||||||| ||| ||||||
Sbjct 904 ATCAAGGACGGTTAGCAGTGGAAG-TCTTGGTTGCTGG-TGTTGTTTTTGAAG-AAGAAG 960
Query 1360 ACTTTGTAAAACCCTGGGAAGGGTTAACTAGCAACCTAGAAAGGTACACGGTGCAATGGG 1419
| ||||| ||||| ||||||||||||||||| || || || ||||||||| |||||||||
Sbjct 961 ATTTTGTGAAACCATGGGAAGGGTTAACTAGTAATCTGGAGAGGTACACGCTGCAATGGG 1020
Query 1420 AATCCGAGAATATTAT-TGCAGTGAGCACTGCAATTCAGGATTGGCTTACTTCAAGAGTT 1478
| ||| ||||| |||| | ||||||||| ||||||||||||||||||||||||||| ||
Sbjct 1021 AGTCCAAGAATCTTATCTT-AGTGAGCACAGCAATTCAGGATTGGCTTACTTCAAGACTT 1079
Query 1479 GCTATGGAGTTGATGAGACAAGGTGCAATGCGCACCGTACTAAACTCGCTTTTAGCAGCA 1538
|| ||||| ||||||| ||| || ||||||| ||| || | ||| |||||| |||
Sbjct 1080 GCCATGGAATTGATGAAACAGGGAGCAATGCACACTGTGTTGGCCTCTCTTTTAATGGCA 1139
Query 1539 ATGGTTTGGCCGGCAACAATCCTT-GTAGCTGCTGATTTTATAGATAGTAGATGGAGTAT 1597
| | ||||| || || ||| || ||||| |||||||| |||||||| | |||||||||
Sbjct 1140 TTAGCATGGCCAGCGACTATC-TTAGTAGCCGCTGATTTCATAGATAGCAAATGGAGTAT 1198
Query 1598 TGCTATTGACAGGTCAGACAAAGCAGGGAAG-CTTCTTGCTGAAGCGCTTCGAAAAGGGT 1656
||||||||| ||||| ||||||||||| ||| ||||| ||||||| || | |||||| |
Sbjct 1199 TGCTATTGATAGGTCGGACAAAGCAGG-AAGACTTCTAGCTGAAGTACTACAAAAAGGCT 1257
Query 1657 TGCAAGGAAATAGACCTGTGACTCTGGTTGGTTTTTCGCTTGGTGCACGTGTTGTCTTTA 1716
|||||||||||||||| | ||||| || |||||||| |||||||| ||||| |||| |
Sbjct 1258 TGCAAGGAAATAGACCCATCACTCTCGTAGGTTTTTCACTTGGTGCTCGTGTCATCTTCA 1317
Query 1717 AGTGCCTCCA-GACTCTGGCAGAGACTGAA-AAGAATGCTGAAATTGTGGAAAGAGTTGT 1774
| |||||||| | ||||||| ||||| ||| || || |||||| ||||||||||||||||
Sbjct 1318 AATGCCTCCAAG-CTCTGGCCGAGACAGAACAA-AACGCTGAACTTGTGGAAAGAGTTGT 1375
Query 1775 TCTTCTTGGAGCACCAATTTCAATCAAGAATGAGAATTGGCGAGACGTAAGAAAGATGGT 1834
||||||||||||||| ||||||||||| ||||| || |||||||||||||| ||||||||
Sbjct 1376 TCTTCTTGGAGCACCCATTTCAATCAATAATGAAAACTGGCGAGACGTAAGGAAGATGGT 1435
Query 1835 GGCTGGAAGATTCATTAATGTTTACGCCACAAATGACTGGACCCTCGG-AGTTGCATTTC 1893
|||||||||||||| |||||||| ||||||||||| |||||||| || | | |||||||
Sbjct 1436 AGCTGGAAGATTCATCAATGTTTATGCCACAAATGATTGGACCCTTGGTA-TCGCATTTC 1494
Query 1894 GTGCAAGTCTGTTGTCCCAAGGATTAGCTGGAATCCAACCGGTCTGTATACCGGGGATTG 1953
| || ||| | || |||||||||||||| ||||||||||| | ||||| || ||||| |
Sbjct 1495 GGGCTAGTTTATTCTCCCAAGGATTAGCGGGAATCCAACCAATTTGTATCCCTGGGATCG 1554
Query 1954 AAGATGTAGATGTAACGGATATGGTGGAAGGTCACTCATCTTACCTATGGAAAACTCAAC 2013
|| |||| |||||||| |||||||||||||||||||| || || |||||||||||||| |
Sbjct 1555 AAAATGTGGATGTAACCGATATGGTGGAAGGTCACTCTTCATATCTATGGAAAACTCAGC 1614
Query 2014 AAATCCTGGAAAGACTCGAACTCGACAATTCTTACCCTGTTTTTCGAAACACTCTCTAAC 2073
| || || || ||||||||| |||||| || ||||||||||||| || ||||||||||||
Sbjct 1615 AGATTCTAGACAGACTCGAAATCGACACTTATTACCCTGTTTTTAGAGACACTCTCTAAC 1674
Score = 100 bits (54), Expect = 4e-20
Identities = 131/166 (79%), Gaps = 13/166 (8%)
Strand=Plus/Plus
Query 443 TGATGATTCTAGT-GAAATGGTGGAGAAAGAGACCGCCTTAGCTAAAGCTGCTGATGCTA 501
||||| |||| || || ||||||||| |||||| |||||||||||||||||||||||||
Sbjct 5 TGATGCTTCT-GTCGAGATGGTGGAGCAAGAGATGGCCTTAGCTAAAGCTGCTGATGCTA 63
Query 502 TGGAT-CAAAACATTCGAAGCAGCTCTCTATCT-GTGGAAT-CTAAGATGGAGAAACATG 558
||| | || | || | || |||||| ||||| | | | | |||||| |||||| |||
Sbjct 64 TGG-TGCATAGTATCC-AA--AGCTCTGTATCTAGAG-A-TGCTAAGAAGGAGAAGCATC 117
Query 559 TGGAAT-TCGAAAACGAATGCCGCGACAAGTATTCTGTTCCCGAGG 603
||||| | ||||| |||||||| || || ||| | ||||| ||||
Sbjct 118 AGGAATAT-GAAAATGAATGCCGTGAGAAATATGCGGTTCCTGAGG 162
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89550165995
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5