BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G18450.1
Length=2020
Score E
Sequences producing significant alignments: (Bits) Value
Ahg480752 jgi|Araly1|480752|fgenesh2_kg.3__3453__AT2G18450.1 3070 0.0
Ahg496924 jgi|Araly1|496924|fgenesh2_kg.8__2740__AT5G66760.1 1515 0.0
> Ahg480752 jgi|Araly1|480752|fgenesh2_kg.3__3453__AT2G18450.1
Length=1907
Score = 3070 bits (1662), Expect = 0.0
Identities = 1830/1912 (96%), Gaps = 7/1912 (0%)
Strand=Plus/Plus
Query 1 GAGATGTGGCGGTGCCTTCGAGTTGCGTCGTCGTCGAGGAGATCGGAATCTAATGGCGCT 60
|||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||
Sbjct 1 GAGATGTGGCGGTGCCTTCGAGTTGCATCGT-G--GAGGAGATCGGAATCTAATGGCGCT 57
Query 61 TTCATCACTTCTCAACTCTCCAGATTCTTCTCAGCTCCTCCTTCGGCAGGGGATAAATCA 120
||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||
Sbjct 58 TTCATCACTACTCGACTCTCCAGATTCTTCTCAGCTCCTTCTTCGACAGGGGATAGATCA 117
Query 121 TCGTATACGATCGTAGATCATACATATGATGCGGTTGTTGTAGGAGCTGGTGGTGCTGGG 180
|||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 118 TCGTATACAATCGTAGATCACACGTATGATGCGGTTGTTGTAGGAGCTGGTGGTGCTGGG 177
Query 181 CTAAGAGCAGCAATAGGATTATCAGAGCATGGTTTTAACACGGCTTGTATCACTAAGCTT 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 178 CTAAGAGCAGCAATAGGATTATCAGAACATGGTTTTAACACGGCTTGTATCACTAAGCTT 237
Query 241 TTTCCAACTCGTTCCCATACTGTTGCAGCTCAGGGAGGTATAAATGCTGCGTTGGGTAAT 300
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 238 TTTCCAACTCGTTCCCATACAGTTGCTGCTCAGGGAGGTATAAATGCTGCGTTGGGTAAT 297
Query 301 ATGAGTGTAGATGACTGGAGATGGCATATGTATGATACTGTCAAAGGAAGTGATTGGTTA 360
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 298 ATGAGTGAAGATGACTGGAGATGGCATATGTATGATACTGTCAAGGGAAGTGATTGGTTA 357
Query 361 GGTGATCAAGATGCAATTCAGTATATGTGCAGGGAAGCACCAAAAGCTGTGATAGAGCTT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 358 GGTGATCAAGATGCAATTCAGTATATGTGCAGGGAAGCACCAAAAGCTGTGATTGAGCTT 417
Query 421 GAGAATTACGGATTGCCATTTTCTAGAACAGAAGATGGAAAAATATATCAACGAGCTTTC 480
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 418 GAGAATTACGGATTGCCATTTTCTCGAACAGAAGAGGGAAAAATATATCAACGAGCTTTT 477
Query 481 GGTGGCCAGAGTCTCGAGTTTGGAATAGGTGGTCAAGCATATCGTTGCGCATGTGCTGCT 540
|||||||||||||| || ||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 478 GGTGGCCAGAGTCTTGATTTTGGAAAAGGTGGTCAAGCATACCGTTGCGCATGTGCTGCT 537
Query 541 GACCGCACTGGGCATGCTCTGTTACATACTCTGTATGGCCAAGCAATGAAACACAACACT 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 538 GACCGCACTGGGCATGCTCTGTTACATACTCTGTATGGCCAAGCAATGAAACACAACACT 597
Query 601 CAATTCTTTGTTGAATACTTTGCCTTGGATTTGATAATGAACAGTGATGGAACCTGTCAA 660
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 CAATTCTTTGTGGAATACTTTGCCTTGGATTTGATAATGAACAGTGATGGAACCTGTCAA 657
Query 661 GGAGTCATTGCACTGAACATGGAAGATGGAACTTTACATCGTTTCCATGCGGGTTCCACG 720
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||
Sbjct 658 GGAGTCATTGCACTGAACATGGAAGATGGTACTTTACATCGTTTCCATGCTGGTTCTACG 717
Query 721 ATATTGGCTACCGGGGGCTATGGAAGAGCTTATTTCTCTGCAACTTCAGCACATACATGC 780
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 718 ATATTGGCTACCGGGGGCTATGGGAGAGCTTATTTTTCTGCAACTTCAGCACATACGTGC 777
Query 781 ACAGGAGATGGAAATGCTATGGTTGCACGAGCCGGGCTACCGCTTCAAGATTTGGAGTTT 840
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 778 ACAGGAGATGGAAATGCTATGGTTGCACGAGCCGGGCTACCGCTGCAGGATTTGGAGTTT 837
Query 841 GTTCAGTTTCATCCTACTGGTATATATGGAGCTGGATGTCTCATCACTGAAGGAGCTAGA 900
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 838 GTTCAGTTTCATCCTACTGGTATATATGGAGCCGGATGTCTCATCACTGAAGGAGCTAGA 897
Query 901 GGTGAAGGAGGAATTCTCAGAAACAGTGAAGGTGAGAAATTCATGGATCGATATGCTCCC 960
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 898 GGTGAAGGAGGAATTCTCAGAAACAGTGAAGGTGAGAAATTCATGGACCGGTATGCTCCC 957
Query 961 ACGGCTAGAGATCTGGCTTCAAGAGATGTTGTTTCAAGATCAATGACTATGGAAATCCGA 1020
|||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 958 ACGGCTAGAGATCTTGCTTCAAGAGATGTCGTTTCAAGATCGATGACTATGGAAATCCGA 1017
Query 1021 CAAGGACGTGGTGCAGGACCAATGAAGGATTATC-TATACCTTTACTTAAACCATCTACC 1079
||||||||||||||||||| ||||||||| | | |||||||| ||||||||||||||||
Sbjct 1018 GAAGGACGTGGTGCAGGACCTATGAAGGATCA-CATATACCTTCACTTAAACCATCTACC 1076
Query 1080 ACCAGAAGTGCTTAAAGAGAGGCTACCCGGTATATCTGAGACCGCAGCTATATTCGCTGG 1139
|||||||||||||||||||||||| || ||||||||||| || || ||||| ||||| ||
Sbjct 1077 ACCAGAAGTGCTTAAAGAGAGGCTTCCTGGTATATCTGAAACTGCGGCTATTTTCGCGGG 1136
Query 1140 TGTCGATGTTACAAGAGAGCCAATTCCTGTATTGCCTACTGTGCATTATAATATGGGTGG 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 TGTCGATGTTACAAGAGAGCCAATTCCTGTATTGCCTACTGTGCATTATAATATGGGTGG 1196
Query 1200 TATTCCCACAAACTACCATGGAGAGGTGATTACTCTTAGAGGTGATGATCCAGATGCTGT 1259
||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| |
Sbjct 1197 TATTCCCACAAACTACCATGGAGAGGTAATTACTGTTAGAGGTGATGATCCAAATGCTAT 1256
Query 1260 AGTTCCTGGACTAATGGCTGCAGGAGAAGCAGCTTGCGCATCGGTTCATGGCGCTAATAG 1319
|||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct 1257 AGTTCCGGGACTAATGGCTGCAGGAGAAGCAGCTTGTGCATCTGTTCATGGTGCTAATAG 1316
Query 1320 ACTTGGTGCAAATTCACTTCTTGACATTGTTGTTTTTGGAAGAGCTTGTGCAAACAGAGT 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317 ACTTGGTGCAAATTCACTTCTTGACATTGTTGTTTTTGGAAGAGCTTGTGCAAACAGAGT 1376
Query 1380 TGCAGAGATTCAAAAACCTGGTGAGAAACTGAAACCTCTAGAGAAGGATGCGGGTGAGAA 1439
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1377 TGCAGAGATTCAAAAACCAGGCGAGAAACTGAAACCTCTAGAGAAGGATGCGGGTGAGAA 1436
Query 1440 GAGTATCGAATGGTTGGACCGAATAAGAAACTCAAACGGGTCACTTCCAACTTCTAAAAT 1499
|||||| ||||||||||||||||||||||||||||||||||| || || |||||||||||
Sbjct 1437 GAGTATTGAATGGTTGGACCGAATAAGAAACTCAAACGGGTCGCTACCGACTTCTAAAAT 1496
Query 1500 CCGCTTAAACATGCAAAGAGTAATGCAAAACAATGCTGCTGT-TTTCCGTACACAAGAAA 1558
|||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||
Sbjct 1497 CCGCTTAAACATGCAAAGAGTAATGCAAAACAATGCTGCTGTCTTTC-GTACGCAAGAAA 1555
Query 1559 CACTAGAGGAAGGTTGTGATTTGATTGATAAGACGTGGGACAGTTTTGGTGATGTCAAAG 1618
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1556 CTCTAGAGGAAGGTTGTGATTTGATTGATAAGACGTGGGACAGTTTTGGTGATGTCAAAG 1615
Query 1619 TGACTGATCGGAGTATGATATGGAACTCGGATTTGATAGAAACTATGGAGCTAGAGAATC 1678
| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1616 TAACGGATCGGAGTATGATATGGAACTCGGATTTGATAGAAACTATGGAGTTAGAGAATC 1675
Query 1679 TTTTGGTTAATGCATGCATAACAATGCATTCTGCTGAGGCTAGGAAGGAGAGTCGAGGAG 1738
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1676 TTTTGGTTAATGCGTGCATAACAATGCATTCTGCTGAGGCTAGGAAGGAAAGTCGAGGAG 1735
Query 1739 CACATGCTCGTGAGGATTTCACGAAACGGGACGATGCAAATTGGATGAAGCACACATTGG 1798
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1736 CACATGCTCGTGAGGATTTCACGAAACGAGACGATGCAAATTGGATGAAGCACACATTGG 1795
Query 1799 GGTATTGGGAAGAAGGGAATGTGAAATTGGAGTATAGACCAGTCCACATGAAGACCTTGG 1858
||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||
Sbjct 1796 GGTATTGGGAAGAAGGGAATGTGAAATTGGAGTATAGACCAGTGCATATGAATACATTGG 1855
Query 1859 ATGATGAGGTTGACACTTTTCCTCCTAAACCTCGTGTTTATTGACATTTCTT 1910
|||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1856 ATGATGAGGTTGACACTTTTCCTCCTAAACCTCGTGTTTATTGAGATTTCTT 1907
> Ahg496924 jgi|Araly1|496924|fgenesh2_kg.8__2740__AT5G66760.1
Length=2268
Score = 1515 bits (820), Expect = 0.0
Identities = 1488/1810 (82%), Gaps = 48/1810 (3%)
Strand=Plus/Plus
Query 117 ATCATCGTATACGATCGTAGATCATACATATGATGCGGTTGTTGTAGGAGCTGGTGGTGC 176
||| || |||||||| || ||||| || |||||||||||||| || ||||||||||||||
Sbjct 242 ATCCTCTTATACGATAGTGGATCACACCTATGATGCGGTTGTGGTGGGAGCTGGTGGTGC 301
Query 177 TGGGCTAAGAGCAGCAATAGGATTATCAGAGCATGGTTTTAACACGGCTTGTATCACTAA 236
||| || || || || || || ||||| ||||||||||||||||| ||||| || |||||
Sbjct 302 TGGACTTAGGGCGGCGATTGGGTTATCGGAGCATGGTTTTAACACCGCTTGCATTACTAA 361
Query 237 GCTTTTTCCAACTCGTTCCCATACTGTTGCAGCTCAGGGAGGTATAAATGCTGCGTTGGG 296
|||||| || || | || ||||||||||| |||||||| ||||| |||||||| ||||
Sbjct 362 GCTTTTCCCCACAAGGTCACATACTGTTGCTGCTCAGGGTGGTATTAATGCTGCACTGGG 421
Query 297 TAATATGAGTGTAGATGACTGGAGATGGCATATGTATGATACTGTCAAAGGAAGTGATTG 356
|||||| | |||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct 422 AAATATGTCCGAAGATGACTGGAGATGGCACATGTATGACACTGTCAAAGGAAGTGACTG 481
Query 357 GTTAGGTGATCAAGATGCAATTCAGTATATGTGCAGGGAAGCACCAAAAGCTGTGATAGA 416
| |||||||||||||||| || ||||||||||| || || ||||||||||| || || ||
Sbjct 482 GCTAGGTGATCAAGATGCTATCCAGTATATGTGTAGAGAGGCACCAAAAGCGGTCATCGA 541
Query 417 GCTTGAGAATTACGGATTGCCATTT-TCTAGAACAGAAGATGGAAAAATATATCAACGAG 475
||||||||||| || |||| ||| ||| | || ||||| || ||||| || || || |
Sbjct 542 ACTTGAGAATTATGGGCTGCC-TTTCTCTCGTACTGAAGAAGGGAAAATTTACCAGCGTG 600
Query 476 C-TTTCGGTGGCCAGAGTCTCGAGTTTGGAATAGGTGGTCAAGCATATCGTTGCGCATGT 534
| ||| ||||| || ||||| || ||||||| ||||||||| || |||||||| || |||
Sbjct 601 CATTT-GGTGGTCAAAGTCTTGACTTTGGAAAAGGTGGTCAGGCCTATCGTTGTGCTTGT 659
Query 535 GCTGCTGACCGCACTGGGCATGCTCTGTTACATACTCTGTATGGCCAAGCAATGAAACAC 594
||||| || || ||||||||||||||||| |||||||| ||||| ||||| ||||| |||
Sbjct 660 GCTGCGGATCGGACTGGGCATGCTCTGTTGCATACTCTCTATGGACAAGCTATGAAGCAC 719
Query 595 AACACTCAATTCTTTGTTGAATACTTTGCCTTGGATTTGATAATGAAC-AGTGATGGAAC 653
||||| || ||||||||||||||||| |||||||||||| | ||| | |||||||| |
Sbjct 720 AACACACAGTTCTTTGTTGAATACTTCGCCTTGGATTTGCTTATG-GCTAGTGATGGCAG 778
Query 654 CTGTCAAGGAGTCATTGCACTGAACATGGAAGATGGAACTTTACATCGTTTCCATGCGGG 713
|| || || || |||||||| ||||||||||||||||| || |||||||||| ||
Sbjct 779 TTGCCAGGGTGTAATTGCACTAAACATGGAAGATGGAACATTGCATCGTTTCC--GC-TC 835
Query 714 TTC-C--ACGATATTGGCTACCGGGGGCTATGGAAGAGCTTATTTCTCTGCAACTTCAGC 770
||| | || || ||||| || ||||| || || ||||| || ||||||||||| |||||
Sbjct 836 TTCACAAACAATTTTGGCAACTGGGGGGTACGGCAGAGCATACTTCTCTGCAACCTCAGC 895
Query 771 ACATACATGCACAGGAGATGGAAATGCTATGGTTGCACGAGCCGGGCTACCGCTT-CAAG 829
||||||||||||||||||||||||||| ||||||||||| ||||| || || || || |
Sbjct 896 ACATACATGCACAGGAGATGGAAATGCCATGGTTGCACGGGCCGGTCTTCCA-TTGCAGG 954
Query 830 ATTTGGAGTTTGTTCAGTTTCATCCTACTGGTATATATGGAGCTGGATGTCTCATCACTG 889
| || ||||||||||| || ||||| |||||||||||||| |||||||||||||||||||
Sbjct 955 ACTTAGAGTTTGTTCAATTCCATCCAACTGGTATATATGGGGCTGGATGTCTCATCACTG 1014
Query 890 AAGGAGCTAGAGGTGAAGGAGGAATTCTCAGAAACAGTGAAGGTGAGAAATTC-ATGGAT 948
||||| || ||||||||||||| || || ||||||||||||||||| | || |||||
Sbjct 1015 AAGGATCTCGAGGTGAAGGAGGTATCCTTAGAAACAGTGAAGGTGA-ACGTTTTATGGAG 1073
Query 949 CGATATGCTCCCACGGCTAGAG-ATCTGGCTTCAAGAGATGTTGTTTCAAGATCAATGAC 1007
||||||||||| || || | || |||| || |||||||||||||| || ||||| |||||
Sbjct 1074 CGATATGCTCCTACAGCCA-AGGATCTTGCATCAAGAGATGTTGTCTCCAGATCCATGAC 1132
Query 1008 TATGGAAATCCGACAAGGACGTGGTGCAGGACCA-ATGAAGGAT--TATCTATA-CCTTT 1063
|||||||||| | |||| ||||||| |||||| || |||||| ||||||| || |
Sbjct 1133 TATGGAAATCAGGGAAGGTCGTGGTGTAGGACCGCAT-AAGGATCATATCTATCTCCAT- 1190
Query 1064 ACTTAAACCATCTACCACCAGAAGTGCTTAAAGAGAGGCTACCCGGTATATCTGAGACCG 1123
|| || | |||| || |||||||| || ||||| ||||| || || || ||||||||||
Sbjct 1191 -CTGAATC-ATCTTCCTCCAGAAGTTCTGAAAGAAAGGCTTCCTGGAATCTCTGAGACCG 1248
Query 1124 CAGCTATATTCGCTGGTGTCGATGTTAC-AAGAGAGCCAATTCCTGTATTGCCTACTGTG 1182
| || || || |||||||| |||||||| || |||||||||||| || || || || ||
Sbjct 1249 CTGCCATCTTTGCTGGTGTTGATGTTACCAA-AGAGCCAATTCCCGTCTTACCCACGGTT 1307
Query 1183 CATTATAATATGGGTGGTATTCCCA-CAAACTACCATGGAGAGGT-GATTACTCTT-AGA 1239
|||||||| ||||||||||| |||| ||||||||||||| ||||| | |||| | | | |
Sbjct 1308 CATTATAACATGGGTGGTAT-CCCAACAAACTACCATGGCGAGGTAG-TTAC-CATCAAA 1364
Query 1240 GGTGATGATCCAGATGCTGTAGTTCCTGGACTAATGGCTGCAGGAGAAGCAGCTTGCGCA 1299
|| ||| |||||||||| || || ||||| ||||||||||| ||||| |||||||| |||
Sbjct 1365 GGCGATAATCCAGATGCAGTGGTACCTGGGCTAATGGCTGCTGGAGAGGCAGCTTGTGCA 1424
Query 1300 TCGGTTCATGGCGCTAATAGACTTGGTGCAAATTCACTTCTTGACATTGTTGTTTTTGGA 1359
|| |||||||| || || || ||||||||||||||||| || |||||||| || |||||
Sbjct 1425 TCTGTTCATGGTGCCAACAGGCTTGGTGCAAATTCACTGCTCGACATTGTCGTCTTTGGT 1484
Query 1360 AGAGCTTGTGCAAACAGAGTTGCAGAGATTCAA--AAACCTGGTGAGAAACTGAAACCTC 1417
| ||||||||||| || ||||| ||||| || ||||| || ||||||| ||||||||
Sbjct 1485 CGTGCTTGTGCAAATAGGGTTGCGGAGAT--AAGCAAACCAGGGGAGAAACAGAAACCTC 1542
Query 1418 TAGAGAAGGATGCGGGTGAGAAGAGTATCGAATGGTTGGACCGAATAAGAAACTCAAACG 1477
| |||||||||||||||||||||| ||| | |||| ||||| | | ||||||||||| |
Sbjct 1543 TTGAGAAGGATGCGGGTGAGAAGACTATTGCATGGCTGGACAGGTTGAGAAACTCAAATG 1602
Query 1478 GGTCACTTCCAACTTCTAAA-ATCCGCTTAAACATGCAAAGAGTAATGCAAAACAATGCT 1536
|||| ||||| ||||| || ||| | || |||||||| ||||| ||||| ||||| ||
Sbjct 1603 GGTCGCTTCCTACTTC-AAGTATCAGATTGAACATGCAGAGAGTTATGCAGAACAACGCA 1661
Query 1537 GCTGTTTTCCGTACACAAGAAACACTAGAGGAAGGTTGTGATTTGATTGATAAGACGTGG 1596
||||| ||||| || ||||||||| | || ||||||||| | |||||||| ||| | |||
Sbjct 1662 GCTGTGTTCCGCACGCAAGAAACATTGGAAGAAGGTTGTCAGTTGATTGACAAGGCCTGG 1721
Query 1597 GACAGTTTTGGTGATGTCAAAGTGACTGATCGGAGTATGATATGGAACTCGGATTTGATA 1656
|| |||||||| |||||| | |||| ||||||||||||||||||||||| |||||||||
Sbjct 1722 GAAAGTTTTGGGGATGTCCAGGTGAAAGATCGGAGTATGATATGGAACTCTGATTTGATA 1781
Query 1657 GAAACTAT-GGAGCTAGAGAATCTTTTGGTTAATGCATGCATAACAATGCATTCTGCTGA 1715
|| || || ||| || ||||| |||||| | || || | ||||||||||||||| || ||
Sbjct 1782 GAGAC-ATTGGAACTGGAGAACCTTTTGATAAACGCTTCCATAACAATGCATTCAGCGGA 1840
Query 1716 GGCTAGGAA-GGAGAGTCGAGGAGCACATGCTCGTGAGGATTTCACGAAACGGGACGATG 1774
|| | ||| ||| ||| |||||||||||||||| || || ||||||||| | || ||||
Sbjct 1841 AGC-ACGAAAGGAAAGTAGAGGAGCACATGCTCGGGAAGACTTCACGAAAAGAGAGGATG 1899
Query 1775 CA-AATTGGATGAAGCACACATTGGGGTATTGGGAAGAAGGGAATGTGAAATTGGAGTAT 1833
| ||| |||||||||| |||||||| ||||||||||| | ||| |||| ||||||||||
Sbjct 1900 GAGAAT-GGATGAAGCATACATTGGGATATTGGGAAGATGAGAAAGTGAGATTGGAGTAT 1958
Query 1834 AGACCAGTCCACATGAAGAC-CTTGGATGATGAGGTTGACACTTTTCCTCCTAAACCTCG 1892
|| || || |||||| | || || | | |||||| |||||||||| ||||| ||| ||||
Sbjct 1959 AGGCCTGTTCACATGGACACTCTCG-ACGATGAGATTGACACTTTCCCTCCCAAAGCTCG 2017
Query 1893 TGTTTATTGA 1902
||| ||||||
Sbjct 2018 TGTCTATTGA 2027
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75951948530
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5