BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G18720.1
Length=1465
Score E
Sequences producing significant alignments: (Bits) Value
Ahg343503 jgi|Araly1|343503|fgenesh1_pg.C_scaffold_3003266 2156 0.0
Ahg493034 jgi|Araly1|493034|fgenesh2_kg.7__2467__AT4G18330.2 1435 0.0
Ahg924959 jgi|Araly1|924959|scaffold_200520.1 1360 0.0
Ahg919093 jgi|Araly1|919093|scaffold_100374.1 1024 0.0
Ahg925067 jgi|Araly1|925067|scaffold_200628.1 782 0.0
> Ahg343503 jgi|Araly1|343503|fgenesh1_pg.C_scaffold_3003266
Length=1398
Score = 2156 bits (1167), Expect = 0.0
Identities = 1321/1398 (94%), Gaps = 0/1398 (0%)
Strand=Plus/Plus
Query 68 ATGTCGAAGAACAAGGGCTTAGCTGAACAAGATCTAAGTAAACTTGATGTAGCTCAGCTG 127
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTCGAAGAACAAGGGCTTAGCTGAACAAGATCTAAGTAAACTTGATGTAGCTCAGCTA 60
Query 128 CATCCTCTCTCTCCTGAGGTCATCTCTCGTCAAGCCACCATTAACATAGGAACCATTGGC 187
||||||||||||||||||||||||||||| |||||||| ||||| ||||| || ||||||
Sbjct 61 CATCCTCTCTCTCCTGAGGTCATCTCTCGACAAGCCACAATTAATATAGGGACTATTGGC 120
Query 188 CATGTCGCTCACGGGAAATCGACAATCGTGAAAGCCGTTTCCGGTGTGCACACTGTCAAA 247
||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||
Sbjct 121 CATGTTGCTCACGGGAAATCGACAATCGTGAAAGCTATTTCCGGTGTGCATACTGTTAAA 180
Query 248 TTCAAGAGTGAATTGGAGCGTAACATTACCATTAAACTTGGTTACGCAAACGCAAAGATT 307
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 181 TTTAAGAGTGAATTGGAGCGTAACATTACCATTAAACTTGGTTATGCAAACGCAAAGATT 240
Query 308 TACAAATGTGAAAAATGCCCTAGACCAGTAGCCTACAAGTCTTTCGGGAGTGGCAAAGAA 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TACAAATGTGAAAAATGCCCTAGACCAGTAGCCTACAAGTCTTTCGGGAGTGGCAAAGAA 300
Query 368 GACAACCCAAGTTGTGATGTCTCTGGACATGAGAAGTACAAGATGAAACTACTAAGACAT 427
||||| |||| ||||||||||||||||||||||| || ||||||||||||||| ||||||
Sbjct 301 GACAATCCAACTTGTGATGTCTCTGGACATGAGATGTGCAAGATGAAACTACTGAGACAT 360
Query 428 GTCTCATTTGTTGATTGCCCGGGACACGATATCCTAATGGCGACAATGCTGAATGGAGCA 487
||||||||||| ||||| |||||||||||||| || |||||||||||| |||||||||||
Sbjct 361 GTCTCATTTGTCGATTGTCCGGGACACGATATTCTGATGGCGACAATGTTGAATGGAGCA 420
Query 488 GCGATTATGGATGGTGCTTTACTAATCATTGCTGCGAATGAGACATGTCCACAACCACAA 547
|||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||
Sbjct 421 GCGATTATGGATGGTGCTCTACTAATCATTGCTGCAAATGAGACATGTCCGCAACCACAA 480
Query 548 ACAGCTGAACATCTTGCTTCTGTTGATATGATGCATCTTAAAGATATCATAATCATTCAG 607
|| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 481 ACTGCAGAACATCTTGCTTCTGTTGATATGATGCACCTTAAAGATATCATAATCATTCAG 540
Query 608 AACAAGATTGATCTCATCCAAGAAAACGAGGCTATTAAACAGCACGAGGACATCCAGAGA 667
|||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||
Sbjct 541 AACAAGATTGATCTCATCCAAGAAAACGAGGCTAGGAGACAGCACGAGGACATTCAGAGA 600
Query 668 TTTATAACGAACACGAATGCGGAAGGTGCTCCTATAGTTCCTGTCTCAGCGCAACTGAAA 727
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 601 TTTATAACGAACACAAATGCGGAAGGTGCTCCTATAGTTCCTGTCTCAGCACAACTGAAA 660
Query 728 TACAACATCGATGTTTTGTGTGAGTACATTGTCAAGAAGATTCCACTCCCTGTGAGGGAT 787
||||||||||||||| |||| |||||||| ||||||||||||||| |||||| |||||||
Sbjct 661 TACAACATCGATGTTGTGTGCGAGTACATAGTCAAGAAGATTCCAATCCCTGAGAGGGAT 720
Query 788 TTTGTGTCACCTCCAAGAATGATTGTGATTCGTTCTTTTGATGTCAATAAACCTGGCTCT 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 TTTGTGTCACCTCCAAGAATGATTGTGATTCGTTCTTTTGATGTCAATAAACCTGGCTCT 780
Query 848 GATTATGATGGTATGAAAGGTGGAGTTGCAGGTGGGAGTATCCTTCAGGGTGTTTTGAAG 907
|| ||| ||| ||||||||||||||| |||||||| |||||||| ||||||||||||||
Sbjct 781 GACTATAATGATATGAAAGGTGGAGTCGCAGGTGGAAGTATCCTCCAGGGTGTTTTGAAA 840
Query 908 GTGGGGCATATAATAGAGATAAGACCTGGAATCACTAGAAAAGATGAGAATGGAGACACT 967
|||||||||||||||||||| |||||||||| ||| | ||||||||| |||||||||||
Sbjct 841 GTGGGGCATATAATAGAGATTCGACCTGGAATTACTGGCAAAGATGAGCATGGAGACACT 900
Query 968 AAATGCACTCCCATTTACACGCGTATAACTTCATTGTACGCGGAACAGAACGAGCTTCAG 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 AAATGCACTCCCATTTACACGCGTATAACTTCATTGTACGCGGAACAGAACGAGCTTCAG 960
Query 1028 TTTGCTGTCCCGGGAGGTTTGATTGGAATTGGGACAAGCATGGATCCTACGCTTACGCGT 1087
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 961 TTTGCTGTCCCGGGAGGTTTAATTGGGATTGGGACAAGCATGGATCCTACGCTTACGCGT 1020
Query 1088 GGTGATAGGTTAGTTGGTCAAGTCCTTGGTGAAATAGGTACTCTCCCTGATGTCTATGTT 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 GGTGATAGGTTAGTTGGTCAAGTCCTTGGTGAAATAGGTACTCTCCCTGATGTCTATGTT 1080
Query 1148 GAACTTGAAGTGAGTTTCCAGCTTCTGACACGTCTCATTGGAGTGAAGACAAAGGAAACA 1207
|| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1081 GAGCTTGAAGTAAGTTTCCAGCTTCTGACACGTCTCATTGGAGTAAAGACAAAGGAAACA 1140
Query 1208 GAGAGGCAAATGAGAGTGTCAAAGCTAGTCAAGGGAGAGATACTGATGTTGAATATCGGA 1267
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1141 GAGAGGCAAATGAGAGTGTCAAAGCTAATCAAGGGAGAGGTACTGATGTTGAATATCGGA 1200
Query 1268 TCGATGTCTACGGGAGCTATGGTTATTGGAGTAAAGAAAGATATGGTGAAAGTTAATCTG 1327
|| ||||| |||||||||||||||||||||||||||||||||||| ||||||| || |||
Sbjct 1201 TCAATGTCGACGGGAGCTATGGTTATTGGAGTAAAGAAAGATATGATGAAAGTGAAACTG 1260
Query 1328 ACACTCCCTGTGTGCACCAGCATTGGAGAGAAAGTGGCTATAAGTCGCCGTGTGGATAGG 1387
|| |||||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1261 ACGCTCCCTGTATGCACCAACATAGGAGAGAAAGTGGCTATAAGTCGCCGTGTTGATAGG 1320
Query 1388 CATTGGCGTTTGATCGGTCGCGGTCAGATTGAGGCTGGAACCACCATTTTTATCCCTTCT 1447
|||||||||||||||||||||||||||||||||||||||||||||||| || ||| |
Sbjct 1321 CATTGGCGTTTGATCGGTCGCGGTCAGATTGAGGCTGGAACCACCATTCCCATACCTGAT 1380
Query 1448 CCTCCTTCTTTGGCATGA 1465
|||||||||||| |||||
Sbjct 1381 CCTCCTTCTTTGCCATGA 1398
> Ahg493034 jgi|Araly1|493034|fgenesh2_kg.7__2467__AT4G18330.2
Length=1624
Score = 1435 bits (777), Expect = 0.0
Identities = 1217/1425 (85%), Gaps = 48/1425 (3%)
Strand=Plus/Plus
Query 57 AATCTGTCG-TAATGTCGAAG-AACAAGGGCTTAGCTGAACAAGATCTAAGTAAACTTGA 114
||||||| | |||| ||| | |||||||| || ||||| ||||||||||||||||||||
Sbjct 105 AATCTGT-GTTAATTTCG-CGTAACAAGGGTTTGGCTGAGCAAGATCTAAGTAAACTTGA 162
Query 115 TGTAGCTCAGCTGCATCCTCTCTCTCCTGAGGTCATCTCTCGTCAAGCCACCATTAACAT 174
|||| | || | |||||||| ||||| |||||||| ||||| ||||| ||||| || ||
Sbjct 163 TGTAACAAAGTTACATCCTCTGTCTCCCGAGGTCATTTCTCGCCAAGCGACCATAAATAT 222
Query 175 AGGAACCATTGGCCATGTCGCTCACGGGAAATCGACAATCGTGAAAGCCGTTTCCGGTGT 234
||||||||||||||||||||| ||||| |||||||| || |||||||| | || |||||
Sbjct 223 AGGAACCATTGGCCATGTCGCACACGGTAAATCGACTATTGTGAAAGCTATCTCTGGTGT 282
Query 235 GCACACTGT-CAAATTCAAGAGTGAATTGGAGCGTAACATTACCATTAAACTTGGTTACG 293
|| ||||| | || |||| |||| ||||||||||||||||||||||||||||||| |
Sbjct 283 TCAGACTGTGC-GTTTTAAGAATGAACTGGAGCGTAACATTACCATTAAACTTGGTTATG 341
Query 294 CAAACGCAAAGATTTACAAATGTGA--A--A-AA-TGCCCTAGACC-A-GTAGCCTACAA 345
|||| |||||||||||||||||||| | | || ||||||||||| | || | |||||
Sbjct 342 CAAATGCAAAGATTTACAAATGTGAGGATGACAAGTGCCCTAGACCAATGT-G-TTACAA 399
Query 346 GTCTT-TCGGGAGTGGCAAAGAAGACAACCC-AAGTTGTGATGTCTCTGGACATGAGAAG 403
||||| | |||||||| |||||||||||||| || |||||||||| ||||| ||||||
Sbjct 400 GTCTTAT-GGGAGTGGAAAAGAAGACAACCCGAA-TTGTGATGTCCCTGGATTTGAGAAA 457
Query 404 TACAAGATGAAACTACTAAGACATGTCTCATTTGTTGATTGCCCGGGACACGATATCCTA 463
| ||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| ||
Sbjct 458 TGCAAGATGAAACTACTGAGACATGTCTCATTTGTCGATTGTCCGGGACATGATATTCTT 517
Query 464 ATGGCGACAATGCTGAATGGAGCAGCGATTATGGATGGTGCTTTACTAATCATTGCTGCG 523
|||||||||||||| ||||||||||| || ||||||||||||||||| | ||||||||
Sbjct 518 ATGGCGACAATGCTCAATGGAGCAGCAATCATGGATGGTGCTTTACTTCTAATTGCTGCT 577
Query 524 AATGAGACATGTCCACAACCACAAACAGCTGAACATCTTGCTTCTGTTGATATGATGCAT 583
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 578 AATGAGACTTGTCCACAACCACAAACTGCTGAACATCTTGCTTCTGTTGATATGATGCGT 637
Query 584 CTTAAAG-ATATCATAATCATTCAGAACAAGATTGATCTCATCCAA-GA-AAACGAGGCT 640
||||| | ||||||||||| |||||||||||||||||||||| || || ||| | ||
Sbjct 638 CTTAA-GCATATCATAATCCTTCAGAACAAGATTGATCTCATT-AATGAGAAA-GCCGCC 694
Query 641 ATTAAACAGCACGAGGAC-ATCCAGAGATTTATAACGAACACGAATGCGGAAGG-TGCTC 698
| | |||||||||||| | || |||| ||||||||||||||| ||||| || || ||| |
Sbjct 695 ACTGAACAGCACGAGG-CGATTCAGAAATTTATAACGAACACAAATGCCGA-GGATGCAC 752
Query 699 CTATAGTTCCTGTCTCAGCGCAACTGAAATACAACATCGATGTTTTGTGTGAGTACATTG 758
||||||||||||||||||| ||||| ||||||||||| |||||| || |||| |||||||
Sbjct 753 CTATAGTTCCTGTCTCAGCACAACTTAAATACAACATTGATGTTGTGAGTGAATACATTG 812
Query 759 TCAAGAAGATTCCACTCCCTGTGAGGGATTTTGTGTCACCTCCAA-GAATGATTGTGATT 817
|||||||||| ||| |||||||||| || ||||||||||| |||| || |||||||||||
Sbjct 813 TCAAGAAGATACCAATCCCTGTGAGAGACTTTGTGTCACCGCCAAAGA-TGATTGTGATT 871
Query 818 CGTTCTTTTGATGTCAATAAACCTGGCTCTGATTATGATGGTATGAAAGGTGGAGTTGCA 877
|||||||| |||||||||||||||||||||| | | ||| |||||||||||||||||
Sbjct 872 CGTTCTTTCGATGTCAATAAACCTGGCTCTGCTGGTCATGAAATGAAAGGTGGAGTTGCT 931
Query 878 GGTGGGAGTATCCTTCAGGGTGTTTTGAAGGTGGGGCATA-TAATAGAGATAAGACCTGG 936
||||| |||||||| ||||| |||||||| ||| || | | || || || ||||||||
Sbjct 932 GGTGGAAGTATCCTCCAGGGAGTTTTGAAAGTGAACCA-ACTGATTGAAATTAGACCTGG 990
Query 937 AATCACTAGAAAAGATGAGAAT-GGAGACACTAAATGCACTCCCATTTACACGCGTATAA 995
|||||| | |||||||| | | ||| || | ||||||||||| |||||| | |||||||
Sbjct 991 TATCACTGGCAAAGATGA-ACTTGGAAACTCAAAATGCACTCCAATTTACTCCCGTATAA 1049
Query 996 CTTCA-TTGTACGCGGAACAGAACGAGCTTCAGTTTGCTGTCCCGGGAGGTTTGATTGGA 1054
||||| || |||||||||||||||||||||||||| ||||||||||||||| | ||||||
Sbjct 1050 CTTCACTT-TACGCGGAACAGAACGAGCTTCAGTTCGCTGTCCCGGGAGGTCTAATTGGA 1108
Query 1055 ATTGGGACAAGCATGGATCCTACGCTTACGCGTGGTGATAGGTTAGTTGGTCAAGTCCTT 1114
|||| |||| |||||| |||||||||||||||| ||||||||| |||||||||||||||
Sbjct 1109 GTTGGAACAACCATGGACCCTACGCTTACGCGTGCTGATAGGTTGGTTGGTCAAGTCCTT 1168
Query 1115 GGTGAAATAGGTACTCTCCCTGATGTCTATGTTGAACTTGAAGTGAGTTTCCAGCTTCTG 1174
|||||||| || |||||||||||||||| |||||| |||||||| |||||||||||||||
Sbjct 1169 GGTGAAATGGGAACTCTCCCTGATGTCTTTGTTGAGCTTGAAGTAAGTTTCCAGCTTCTG 1228
Query 1175 ACACGTCTCATTGGAGTGAAGACAAAGGAAACAGAGAGGCAAATGAGAGTGTCAAAGCTA 1234
|| |||||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||
Sbjct 1229 ACTCGTCTCATTGGAGTGAGGACAAAGGAAAAAGAGAAGCAAATGAAAGTGTCAAAGCTA 1288
Query 1235 GTCAAGGGAGAGATACTGATG-TTGAATATCGGATCGATGTCTACGGGAGCTATGGTTAT 1293
||| | ||||||||| ||| || || ||||| || |||||||| ||||||| ||||||
Sbjct 1289 ACCAAAGAAGAGATACTAATGGTT-AACATCGGGTCCATGTCTACAGGAGCTAAGGTTAT 1347
Query 1294 TGGAGTAAAGAAAGATATGGTGAAAGTT-AATCTGACA-CTCCCTGTGTGCACCAGCATT 1351
|||||| |||||||||||||||||| || || ||||| |||| ||||| |||| |||
Sbjct 1348 TGGAGTGAAGAAAGATATGGTGAAACTTCAA-CTGACGTCTCCG-GTGTGTACCACCATA 1405
Query 1352 GGAGAGAAAGTGGCTATAAGTCGCCGTGTGGATAGGCATTGGCGT-TTGATCGGTC-GCG 1409
|||||||| |||||| |||| |||||||| ||||||||||||||| || || ||| | |
Sbjct 1406 GGAGAGAAGGTGGCTTTAAGCCGCCGTGTCGATAGGCATTGGCGTCTT-ATTGGTAAG-G 1463
Query 1410 GTCAGATTGAGGCTGGAACCACCATTTTTATCCCTTCTCCTCCTT 1454
|||||||| |||||||||||||| | | ||| |||||||||
Sbjct 1464 GTCAGATTCTTGCTGGAACCACCATCGATGTTCCTCCTCCTCCTT 1508
> Ahg924959 jgi|Araly1|924959|scaffold_200520.1
Length=1441
Score = 1360 bits (736), Expect = 0.0
Identities = 1185/1399 (85%), Gaps = 42/1399 (3%)
Strand=Plus/Plus
Query 79 CAAGGGCTTAGCTGAACAAGATCTAAGTAAACTTGATGTAGCTCAGCTGCATCCTCTCTC 138
|||||| ||||||||||||||||||||||| ||||||||| | |||| |||||||| ||
Sbjct 32 CAAGGGTTTAGCTGAACAAGATCTAAGTAAGCTTGATGTAAATGAGCTACATCCTCTGTC 91
Query 139 TCCTGAGGTCATCTCTCGTCAAGCCACCATTAACATAGGAACCATTGGCCATGTCGCTCA 198
||| |||||||| ||||| || || ||||| ||||||||||||||||| ||||| || ||
Sbjct 92 TCCCGAGGTCATATCTCGCCAGGCAACCATAAACATAGGAACCATTGGACATGTTGCACA 151
Query 199 CGGGAAA-TCGACAATCGTGAAAGCCGTTTCCGGTGTGCACACTGTCAAATTCAAGAGTG 257
| ||||| || || | |||||||| |||| |||||||| |||||| || |||| ||
Sbjct 152 C-GGAAAGTCTACGGTTGTGAAAGCTATTTCTGGTGTGCAGACTGTCCGTTTTAAGAATG 210
Query 258 AATTGGAGCGTAACATTACCATTAAACTTGGTTACGCAAACGCAAAGATTTACAAATGTG 317
||||||||||||||||||||||||||||||| || ||||| || ||||||||| ||||||
Sbjct 211 AATTGGAGCGTAACATTACCATTAAACTTGGATATGCAAATGCCAAGATTTACCAATGTG 270
Query 318 A--A-AA-A--TGCCCTAGACCA--GTAGCCTACAAGTCTT-TCGGGAGTGGCAAAGAAG 368
| | || | |||||||||||| || || |||||||||| | |||||||| |||||||
Sbjct 271 AGGATAACAAGTGCCCTAGACCAATGT-GC-TACAAGTCTTAT-GGGAGTGGGAAAGAAG 327
Query 369 ACAACCCAAGTTGTGATGTCTCTGGACATGAGAAGTACAAGATGAAACTACTAAGACATG 428
||||||||| ||| ||||| ||||| |||||| | ||||||||| ||||| || ||||
Sbjct 328 ACAACCCAAATTGCCATGTCCCTGGATTTGAGAACTGCAAGATGAAGCTACTGAGGCATG 387
Query 429 TCTCATTTGTTGATTGCCCGGGACACGATATCCTAATGGCGACAATGCTGAATGGAGCAG 488
|||| ||||| |||||||||||||| ||||| || ||||| |||||||| ||||| || |
Sbjct 388 TCTCCTTTGTGGATTGCCCGGGACATGATATTCTCATGGCCACAATGCTCAATGGGGCCG 447
Query 489 CGATTATGGATGGTGCTTTACTAATCATTGCTGCGAATGAGA-CATGTCCACAACCACAA 547
| || |||||||||||| |||| | ||||||||||||||| | ||||| ||||||||
Sbjct 448 CCATCATGGATGGTGCTCTACTTTTAATTGCTGCGAATGAGGTC-TGTCCTCAACCACAG 506
Query 548 ACAGCTGAACATCTTGCTTCTGTTGATATGATGCATCTTAAAG-ATATCATAATCATTCA 606
|||||||||||||||||||| || ||||||||||| ||||| | |||| |||||| ||||
Sbjct 507 ACAGCTGAACATCTTGCTTCCGTCGATATGATGCACCTTAA-GCATATTATAATCCTTCA 565
Query 607 GAACAAGATTGATCTCATCCAAGAAAACGAGGCTATTAAACAGCACGA-GGACA-TCCAG 664
|||||||||||||||||| |||||||| | || || |||||||| | || || | |||
Sbjct 566 GAACAAGATTGATCTCATTCAAGAAAAAGCCGCCATCGAACAGCAC-ACGG-CAATTCAG 623
Query 665 AGATTTATAACGAACACGAATGCGGAAGGTGCTCCTATAGTTCCTGTCTCAGCGCAACTG 724
||||||||||||||||| ||||| || ||||| |||||||||||||||||||| ||||||
Sbjct 624 AGATTTATAACGAACACAAATGCCGAGGGTGCCCCTATAGTTCCTGTCTCAGCACAACTG 683
Query 725 AAATACAACATCGATGTTTTGTGTGAGTACATTGTCAAGAAGATTCCACTCCCTGTGAGG 784
||||||||||| |||| | |||| |||||||||||||||||||||||| ||||| |||
Sbjct 684 AAATACAACATTGATGCTGTGTGCGAGTACATTGTCAAGAAGATTCCAATCCCTAAAAGG 743
Query 785 GATTTTGTGTCACCTCCAA-GAATGATTGTGATTCGTTCTTTTGATGTCAATAAACCTGG 843
|||||||||||||| |||| || |||| | |||||||||||||||||||||||||||||
Sbjct 744 GATTTTGTGTCACCGCCAAAGA-TGATAATCATTCGTTCTTTTGATGTCAATAAACCTGG 802
Query 844 CTCTGA--TTA-TGATGGTATGAAAGGTGGAGTTGCAGGTGGGAGTATCCTTCAGGG-TG 899
|| ||| ||| |||| | | ||||||||||| |||||||| |||||| ||| ||| ||
Sbjct 803 CTATGAGGTTACTGATA-T-T-AAAGGTGGAGTGGCAGGTGGAAGTATC-TTCCGGGGTG 858
Query 900 TTTTGAAGGTGGGGCATATA-ATAGAGATAAGACCTGGAATCACTAGAAAAGATGAGAAT 958
||||||| || || || || ||||| ||||||| ||| ||| ||||||||| |
Sbjct 859 TTTTGAAAGTAAACCA-ATTGATTGAGATCCGACCTGGTATCGTTAGCAAAGATGAGCTT 917
Query 959 GGAGACACTAA-ATGCACTCCCATTTACACGCGTATAACTTCATTGTACGCGGAACAGAA 1017
||| || | || |||| ||||||||||| | ||||| |||||||||||||| ||||||||
Sbjct 918 GGAAACCC-AAGATGCTCTCCCATTTACTCCCGTATCACTTCATTGTACGCAGAACAGAA 976
Query 1018 CGAGCTTCAGTTTGCTGTCCCGGGAGGTTTGATTGGAATTGGGACAA-GCATGGATCCTA 1076
|||||||||||||||||| ||||||||| |||| ||| ||||||||| | ||||| ||||
Sbjct 977 CGAGCTTCAGTTTGCTGTGCCGGGAGGTCTGATCGGAGTTGGGACAACG-ATGGACCCTA 1035
Query 1077 CGCTTACGCGTGGTGATAGGTTAGTTGGTCAAGTCCTTGGTGAAATAGGTACTCTCCCTG 1136
|||| ||||||| ||||||||| ||||||||||| ||||||||||| ||| |||||||||
Sbjct 1036 CGCTCACGCGTGCTGATAGGTTGGTTGGTCAAGTGCTTGGTGAAATGGGTTCTCTCCCTG 1095
Query 1137 ATGTCTATGTTGAACTTGAAGTGAGTTTCCAGCTTCTGACACGTCTCATTGGAGTGAAGA 1196
||||||||||||| ||||| |||||||||||||||||||| ||||| ||||| |||| ||
Sbjct 1096 ATGTCTATGTTGAGCTTGAGGTGAGTTTCCAGCTTCTGACCCGTCTTATTGGGGTGAGGA 1155
Query 1197 CAAAGGAAACAGAGAGGCAAATGAGAGTGTCAAAGCTA-GTCAAGGGAGAGATACTGATG 1255
||||||||| ||||| ||| |||| |||| |||||||| | |||||||||||||||||||
Sbjct 1156 CAAAGGAAAAAGAGAAGCAGATGAAAGTGGCAAAGCTAAG-CAAGGGAGAGATACTGATG 1214
Query 1256 TTGAATATCGGATCGATGTCTACGGGAGCTATGGTTATTGGAGTAAAGAAAGATATGGTG 1315
|||| ||||| |||||||| ||||||||| |||| | ||||| |||||||||||| ||
Sbjct 1215 GTGAACATCGGGTCGATGTCGGCGGGAGCTAAGGTTCTAGGAGTGAAGAAAGATATGATG 1274
Query 1316 AAAGTT-AATCTGACACTCCCTGTGTGCACCAGCATTGGAGAGAAAGTGGCTATAAGTCG 1374
||||| || |||||| | ||||| ||||||| ||| |||||||| |||||| |||| ||
Sbjct 1275 AAAGTGCAA-CTGACAGTGCCTGTCTGCACCAACATAGGAGAGAAGGTGGCTCTAAGCCG 1333
Query 1375 CCGTGTGGATAGGCATTGGCGTTTGATCGGTCGCGGTCAGATTGAGGCTGGAACCACCAT 1434
|||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||| |
Sbjct 1334 CCGTGTCGACAGGCATTGGCGTTTGATTGGTCGTGGTCAGATTGAGGCTGGAACCACCGT 1393
Query 1435 TTTTATCCCTTCTCCTCCT 1453
| ||||| ||||||||
Sbjct 1394 TCCCGTCCCTCCTCCTCCT 1412
> Ahg919093 jgi|Araly1|919093|scaffold_100374.1
Length=1442
Score = 1024 bits (554), Expect = 0.0
Identities = 1131/1404 (81%), Gaps = 62/1404 (4%)
Strand=Plus/Plus
Query 66 TAATGTCGAAGAACAAGGGCTTAGCTGAACAAGATC-TAAGTAAACTT-GATGTAGCTCA 123
||||||||| |||||| || || ||||| ||||||| ||| ||| || |||||| ||
Sbjct 23 TAATGTCGAGGAACAAAGGTTTGGCTGAGCAAGATCTTAA--AAAATTGGATGTAACTGT 80
Query 124 GCTGCATCCTCTCTCTCCTGAGGTCATCTCTCGTCAAGCCACCATTAACATAGGAACCAT 183
||| |||||| | || ||||||||||| ||||| || ||||| ||||| |||||||||||
Sbjct 81 GCTACATCCTTTGTCCCCTGAGGTCATTTCTCGCCAGGCCACTATTAATATAGGAACCAT 140
Query 184 TGGCCATGTCGCTCACGGGAAA-TCGACAATCGTGAAAGCCGTTTCCGGTGTGCACACTG 242
||||||||||||||| ||||| || || | |||||||| |||| ||||| || ||||
Sbjct 141 TGGCCATGTCGCTCA-TGGAAAGTCCACTGTTGTGAAAGCTATTTCTGGTGTCCAGACTG 199
Query 243 TCAAATTCAAGAGTGAATTGGAGCGTAACATTACCATTAAACTTGGTTACGCAAACGCAA 302
|| || |||| ||||||||||||||||||||||||||| ||||| || ||||| || |
Sbjct 200 TCCGTTTTAAGAATGAATTGGAGCGTAACATTACCATTAAGCTTGGATATGCAAATGCTA 259
Query 303 AGATTTACAAATGT---GA--A-AAATGCCCTAGACC-A-GTAGCCTACAAGTCTTTCGG 354
|||||||||||||| || | |||||||||||||| | || | ||||||| | | |||
Sbjct 260 AGATTTACAAATGTGAGGATGAGAAATGCCCTAGACCAATGT-G-CTACAAGGCCTACGG 317
Query 355 GAGTGGCAAAGAAGACAAC-CCAAGTTGTGATGTCTCTGGACATGAGAAGTACAAGATGA 413
||||| ||||||||| || |||| |||||||||| | ||| ||| || | ||||||||
Sbjct 318 AAGTGGAAAAGAAGAC-ACTCCAAATTGTGATGTCCCCGGATTTGAAAACTCCAAGATGA 376
Query 414 AACTACTAAGACATGTCTCATTTGTTGATTGCCCGGGACACGATATCCTAATGGCGACAA 473
||||| | || ||||| ||||| || |||||||||||||||||||| || ||||| ||||
Sbjct 377 AACTATTGAGGCATGTGTCATTCGTGGATTGCCCGGGACACGATATTCTCATGGCAACAA 436
Query 474 TGCTGAATGGAGCAGCGATTATGGATGGTGCTTTACTAATCATTGCTGCGAATGAGACAT 533
|||| || |||||||| || ||||||||||| |||| | || ||||| |||||||| |
Sbjct 437 TGCTTAACGGAGCAGCCATCATGGATGGTGCACTACTCTTAATCGCTGCAAATGAGACGT 496
Query 534 GTCCACAACCACAAACAG-CTGAACATCTTGCTTCTGTTGATATGATGCATCTTAAAG-A 591
|||| ||||||||||| | |||||||||||||| | || || || ||||| || ||| |
Sbjct 497 GTCCGCAACCACAAAC-GTCTGAACATCTTGCTGCCGTCGAGATTATGCA-ATTGAAGCA 554
Query 592 TATCATAATCATTCAGAACAAGATTGATCTCATCCAAGAAAACGAGGCTATTAAACAGCA 651
|||||| ||| ||||||||||||||||||| || ||||| |||| || ||||| |||||
Sbjct 555 TATCATCATCCTTCAGAACAAGATTGATCTTATTCAAGAGAACGTTGCCATTAATCAGCA 614
Query 652 CGAGGAC-ATCCAGAGATTTATAACGAACAC-GAATGCGGAAGGTGCTCCTATAGTTCCT 709
||||| | || |||| |||||||| |||||| | |||||| | |||||| || || ||
Sbjct 615 CGAGG-CAATTCAGAAATTTATAATGAACACTG-TTGCGGATGCTGCTCCAATCGTCCCC 672
Query 710 GTCTCAGCGCAACTGAAATACAACATCGATGTTTTGTGTGAGTACATTGTCAAGAAGATT 769
|||||||| |||||||||||||||||||||||| |||| |||||||| |||||||||||
Sbjct 673 GTCTCAGCACAACTGAAATACAACATCGATGTTGTGTGCGAGTACATAGTCAAGAAGATC 732
Query 770 CCACTCCCTGTGAGGGATTTTGTGTCACCTCCAAGA-ATGATTGTGATTCGTTCTTTTGA 828
||| |||||| |||| ||||||||||||| |||| | ||||| |||||||| ||||||||
Sbjct 733 CCAATCCCTGAGAGGAATTTTGTGTCACCCCCAA-ATATGATAGTGATTCGATCTTTTGA 791
Query 829 TGTCAATAAACCTGGCTCTGA-TTATGATG-GTATGAAAGGTGGAGTTGCAGGTGGGAGT 886
|||||| |||||||| | ||| | ||||| | || |||||||||||||||||||| |||
Sbjct 792 TGTCAACAAACCTGGTTATGAGGT-TGATGAG-ATTAAAGGTGGAGTTGCAGGTGGAAGT 849
Query 887 ATCCTTCAGGGTGTTTTGAAGGTGGGGC-ATATAATAGAGATAAGACCTGGAATCACTAG 945
||||| | |||||||||||| || | || |||| || || ||||||| ||| ||
Sbjct 850 ATCCTCCGGGGTGTTTTGAAAGTCAACCAAT-TAATTGAAATCCGACCTGGTATCGTTAC 908
Query 946 AAAAGATGAGAATGG-AGACACTAAATGCACTCCCATTTACACGCGTATAACT-TCATTG 1003
|||||| ||| ||| | || | ||||||||||| |||||| | || |||| | ||| |
Sbjct 909 AAAAGACGAGCGTGGCA-ACTCAAAATGCACTCCAATTTACTCTCGCATAA-TCTCACTC 966
Query 1004 TACGCGGAACAGAACGAGCTTCAGTTTGCTGTCCC-GGGAGGTTTGATTGGAATTGGGAC 1062
|||||||||||||||||||||||||||||||| || ||| ||| | || ||| |||||||
Sbjct 967 TACGCGGAACAGAACGAGCTTCAGTTTGCTGTTCCTGGG-GGTCTAATAGGAGTTGGGAC 1025
Query 1063 AAGCA-TGGATCCTACGCTTACGCGTGGTGATAGGTTAGTTGGTCAAGTCCTTGGTGAAA 1121
|| || |||| || || ||||| |||| ||| | |||||||||||||||||||||||||
Sbjct 1026 AA-CAATGGACCCAACTCTTACTCGTGCAGATCGATTAGTTGGTCAAGTCCTTGGTGAAA 1084
Query 1122 TAGGTACTCTCCCTGATGTCTATGTTGAACTTGAAGTGAGTTTCCAGCTTCTGAC-ACGT 1180
| ||| | || |||||||||| ||||||||| || || | ||| ||||| || ||||
Sbjct 1085 TCGGTTCACTTCCTGATGTCTTTGTTGAACTCGAGGTTAACTTCTTTCTTCT-ACGACGT 1143
Query 1181 CTCATTGG-AGTGAAGA-CAAAGGAAACAGAGAGGCAAATGAGAG-TGTCAAAGCTAGTC 1237
| |||| ||||| || |||||| | |||||| ||| || || ||||||||||| |
Sbjct 1144 TTG-TTGGGAGTGA-GAACAAAGGGATCAGAGAAACAAGGGA-AGGTGTCAAAGCTAA-C 1199
Query 1238 -AAGGGAGAGATACTGATGTTGAATATCGGATCGATGTCTACGGGAGCTATGGTTATTGG 1296
||||||||||| |||||| | || || || || ||||| || ||||| | ||| | ||
Sbjct 1200 GAAGGGAGAGATTCTGATGCTCAACATTGGTTCTATGTCCACTGGAGCCAAAGTTGTGGG 1259
Query 1297 AGT-AAAGAAAGATATGG-TGAAAGTT-AATCTGACA-CTCCCTGTGTGCACCAGCATTG 1352
||| |||| ||| ||| | ||| | || |||||| | || || || ||||||| |
Sbjct 1260 AGTTAAAGTC-GATCTGGCT-AAACTGCAA-CTGACAGCGCCG-GTTTGTACCAGCAAAG 1315
Query 1353 GAGAGAAAGTGGCTATAAGTC-GCCGTGTGGATAGGCATTGGCGTTTGATCGGTCGCGGT 1411
|||||||||||||| |||| | | |||||||| | ||||||||||||||| ||| | |||
Sbjct 1316 GAGAGAAAGTGGCTCTAAG-CAGGCGTGTGGAAAAGCATTGGCGTTTGATTGGTTGGGGT 1374
Query 1412 CAGATTGAGGCTGGAACCACCATT 1435
|||||| | |||||||||||||||
Sbjct 1375 CAGATTCAAGCTGGAACCACCATT 1398
> Ahg925067 jgi|Araly1|925067|scaffold_200628.1
Length=1399
Score = 782 bits (423), Expect = 0.0
Identities = 670/788 (85%), Gaps = 22/788 (3%)
Strand=Plus/Plus
Query 76 GAACAAGGGCTTAGCTGAACAAGATCTAAGTAAACTTGATGTAGCTCAGCTGCATCCTCT 135
||||||||| ||||||||||||||||||||||| ||||||||| | |||| ||||||||
Sbjct 29 GAACAAGGGTTTAGCTGAACAAGATCTAAGTAAGCTTGATGTAAATGAGCTACATCCTCT 88
Query 136 CTCTCCTGAGGTCATCTCTCGTCAAGCCACCATTAACATAGGAACCATTGGCCATGTCGC 195
||||| |||||||| ||||| || || ||||| ||||||||||||||||| ||||| ||
Sbjct 89 GTCTCCCGAGGTCATATCTCGCCAGGCAACCATAAACATAGGAACCATTGGACATGTTGC 148
Query 196 TCACGGGAAA-TCGACAATCGTGAAAGCCGTTTCCGGTGTGCACACTGTCAAATTCAAGA 254
||| ||||| || || | |||||||| |||| |||||||| |||||| || ||||
Sbjct 149 ACAC-GGAAAGTCTACGGTTGTGAAAGCTATTTCTGGTGTGCAGACTGTCCGTTTTAAGA 207
Query 255 GTGAATTGGAGCGTAACATTACCATTAAACTTGGTTACGCAAACGCAAAGATTTACAAAT 314
||||||||||||||||||||||||||||||||| || ||||| || ||||||||| |||
Sbjct 208 ATGAATTGGAGCGTAACATTACCATTAAACTTGGATATGCAAATGCCAAGATTTACCAAT 267
Query 315 GTGA--A-AA-A--TGCCCTAGACCA--GTAGCCTACAAGTCTT-TCGGGAGTGGCAAAG 365
|||| | || | |||||||||||| || || |||||||||| | |||||||| ||||
Sbjct 268 GTGAGGATAACAAGTGCCCTAGACCAATGT-GC-TACAAGTCTTAT-GGGAGTGGGAAAG 324
Query 366 AAGACAACCCAAGTTGTGATGTCTCTGGACATGAGAAGTACAAGATGAAACTACTAAGAC 425
|||||||||||| ||| |||||| ||||| |||||| | ||||||||| ||||| || |
Sbjct 325 AAGACAACCCAAATTGCGATGTCCCTGGATTTGAGAACTGCAAGATGAAGCTACTGAGGC 384
Query 426 ATGTCTCATTTGTTGATTGCCCGGGACACGATATCCTAATGGCGACAATGCTGAATGGAG 485
||||||| ||||| |||||||||||||| ||||| || ||||| |||||||| ||||| |
Sbjct 385 ATGTCTCCTTTGTGGATTGCCCGGGACATGATATTCTCATGGCCACAATGCTCAATGGGG 444
Query 486 CAGCGATTATGGATGGTGCTTTACTAATCATTGCTGCGAATGAGA-CATGTCCACAACCA 544
| || || |||||||||||| |||| | ||||||||||||||| | ||||| ||||||
Sbjct 445 CCGCCATCATGGATGGTGCTCTACTTTTAATTGCTGCGAATGAGGTC-TGTCCTCAACCA 503
Query 545 CAAACAGCTGAACATCTTGCTTCTGTTGATATGATGCATCTTAAAG-ATATCATAATCAT 603
|| |||||||||||||||||||| || ||||||||||| ||||| | |||| |||||| |
Sbjct 504 CAGACAGCTGAACATCTTGCTTCCGTCGATATGATGCACCTTAA-GCATATTATAATCCT 562
Query 604 TCAGAACAAGATTGATCTCATCCAAGAAAACGAGGCTATTAAACAGCACG-AGGACATCC 662
||||||||||||||||||||| |||||||| | || || |||||||| || | || |
Sbjct 563 TCAGAACAAGATTGATCTCATTCAAGAAAAAGCCGCCATCGAACAGCACACAGCA-ATTC 621
Query 663 AGAGATTTATAACGAACACGAATGCGGAAGGTGCTCCTATAGTTCCTGTCTCAGCGCAAC 722
||||||||||||||||||| ||||| || ||||| |||||||||||||||||||| ||||
Sbjct 622 AGAGATTTATAACGAACACAAATGCCGAGGGTGCCCCTATAGTTCCTGTCTCAGCACAAC 681
Query 723 TGAAATACAACATCGATGTTTTGTGTGAGTACATTGTCAAGAAGATTCCACTCCCTGTGA 782
||||||||||||| |||| | |||| |||||||||||||||||||||||| ||||| |
Sbjct 682 TGAAATACAACATTGATGCTGTGTGCGAGTACATTGTCAAGAAGATTCCAATCCCTAAAA 741
Query 783 GGGATTTTGTGTCACCTCCAA-GAATGATTGTGATTCGTTCTTTTGATGTCAATAAACCT 841
|||||||||||||||| |||| || |||| | |||||||||||||||||||||||||||
Sbjct 742 GGGATTTTGTGTCACCGCCAAAGA-TGATAATCATTCGTTCTTTTGATGTCAATAAACCT 800
Query 842 GGCTCTGA 849
|||| |||
Sbjct 801 GGCTATGA 808
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54811862555
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5