BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G19090.1
Length=2445
Score E
Sequences producing significant alignments: (Bits) Value
Ahg480823 jgi|Araly1|480823|fgenesh2_kg.3__3524__AT2G19090.1 3701 0.0
Ahg491740 jgi|Araly1|491740|fgenesh2_kg.7__1173__AT4G30130.1 852 0.0
Ahg942134 jgi|Araly1|942134|scaffold_602678.1 54.7 3e-06
> Ahg480823 jgi|Araly1|480823|fgenesh2_kg.3__3524__AT2G19090.1
Length=2421
Score = 3701 bits (2004), Expect = 0.0
Identities = 2314/2457 (94%), Gaps = 48/2457 (2%)
Strand=Plus/Plus
Query 1 ATGGGATGTTCTCATTCCAAGTTAGATGATGAAGAAGCAGTTCAGATCTGTAAAGACAGG 60
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1 ATGGGATGTTCTCATTCAAAGTTAGATGATGAAGAAGCAGTTCAGATCTGTAAAGATAGG 60
Query 61 AAACGTTTCATCAAACAAGCTATTGAACATAGAACTAAGTTTGCTTCTGGTCACATTGCT 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 61 AAACGTTTCATCAAACAAGCTATAGAACATAGAACTAAGTTTGCTTCTGGTCACATTGCT 120
Query 121 TATATTCACTCTCTTAGAAAAGTCTCTGATGCTCTCCATGACTTTATCCTCCAAGGAGAC 180
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 121 TATATTCACTCTCTTAGAAATGTCTCTGATGCTCTCCATGACTTTATTATCCAAGGAGAC 180
Query 181 AACAACAATGAGTTTGTTCCTACTCTCTGTCAAGACTCATTCGTCACTCCGGTCAAGAGA 240
||||||||||||||||||| | | | |||||||||||||||||||||| || ||||||
Sbjct 181 AACAACAATGAGTTTGTTCTTCCGATGAGTCAAGACTCATTCGTCACTCCTGTTAAGAGA 240
Query 241 ATGCCACAGAGACGTCGTCGAAGCAGCCGTAGTAATAGCGGTGAGTTCATCTCCATTTCG 300
|| | | || |||||||||||||||||||||||||| ||||||
Sbjct 241 AT---------A------C----CA--CGTAGTAATAGCGGTGAGTTCATCTCGATTTCG 279
Query 301 CCTTCTTCGATTCCTCCGAAAATGATTCAAG-GTAGGCCAAGATCGAATGTGAAAGCGAA 359
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 280 CCTTCTTCGATTCCTCCGAAAATGATTC-AGAGTAGGCCAAGATCGAATGTGAAAGCGAA 338
Query 360 TTATTTGATGGCTAATAGAAGTAGACCGGTTAGAGTCGAACAGAGATCTCCTGAAACGTT 419
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 339 TTACTTGATGGCTAATAGAAGTAGACCGGTTAGAGTAGAACAGAGATCTCCTGAAACGTT 398
Query 420 TAGAGTTGAGACATTTTCTCCACCTAGTAGTAGTAACCAATATGGTGAATCAGATGGTTT 479
|||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct 399 TAGAGTCGAGACATTTTCACCACC------TAGTAACCAATATGGTGAAGCAGATGGTTT 452
Query 480 CTTT-G---G-A-ATGAATATGAATATGAATACTTCTGCGTCTACTTCATCTTCGTTTTG 533
|||| | | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 453 CTTTGGAATGAATATGAATATGAATATGAATACTTCTGCGTCTACTTCATCTTCGTTTTG 512
Query 534 GAATCCGTTGAGCTCTCCTGAGCAAAGGTTAAGTAGTCATAACATTCCTCCTCCTTCACC 593
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 GAATCCGTTGAGTTCTCCTGAGCAAAGGTTAAGTAGTCATAACATTCCTCCTCCTTCACC 572
Query 594 GCAGAATTCGCAGTGGGATTTCTTCTGGAATCCGTTTTCTTCGTTGGATTATTATGGATA 653
|||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||
Sbjct 573 GCAGAATTCGCAGTGGGATTTCTTTTGGAATCCGTTTTCGTCATTGGATTATTATGGATA 632
Query 654 CAATAGTTATGACCGAGGAAGTGTTGATAGTAGGAGTGGTATAGATGATGAGATTAGAGG 713
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 633 TAATAGTTATGATAGAGGAAGTGTTGATAATAGGAGTGGTATAGATGATGAGATTAGAGG 692
Query 714 ATTGAGACGTGTTAGAGAGGAAGAAGGGATTCCTGATTTGGAAGAAGATGATGAACCTCA 773
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 693 GTTGAGACGTGTTAGAGAGGAAGAAGGGATTCCGGATTTGGAAGAAGATGATGAACCTAA 752
Query 774 TAAACCTGAACCTGTCGTCAATGTGCGGTTTCAGAATCATAATCCGAATCCGAAAGCAAC 833
| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 753 TGAACCTGAACCTGT-G--AATGTGCGGTTTCAGAATCATAATCCGAATCCGAAAGCAAC 809
Query 834 GGAAGAGAATAGAGGTAAAGTTGATAAGAGTTGTTGCAATGAGGAAGTTAAAGTtgaaga 893
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 810 GGAAGAGAGTAGAGGTAAAGTTGATAAGAGTTGTTGCAATGAGGAAGTTAAAGTTGAAGA 869
Query 894 tgttgatgaggatgaagacgaggatgga-gatg-ag--gatgatgatgagTTTACGGATA 949
|||||||||||| || || ||||| || |||| || || |||||||||||||||||||
Sbjct 870 TGTTGATGAGGACGAGGATGAGGA-CGAGGATGAAGATGAGGATGATGAGTTTACGGATA 928
Query 950 GCGGGTGTGAGA-CTGAGAATGAGGGAGACGAGAAATGCGTTGCTCCTCCAACGCAAGAA 1008
|||||||||| | |||||||||||||||| ||||||||||||| || ||||||||||||
Sbjct 929 GCGGGTGTGA-ATCTGAGAATGAGGGAGATGAGAAATGCGTTG--CC-CCAACGCAAGAA 984
Query 1009 CAGCGAAAAGCTGAGGTGTGTAGAGGAGGAGAAGCTACAGGGAATGTTGTTGGAGTAGGT 1068
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 985 CAGCGAAAAGCTGAGGTGTCTAGAGGAGGAGAAACTACAGGGAATGTTGTTGGAGTAGGT 1044
Query 1069 AAGGTTCAAGAGATGAAGAATGTTGTTGGTGTTAGAGATGATGCAAAGACGACGGGGTTC 1128
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 1045 AAGGTTCAAGAGATGAAGAATGTTGTTGGTGTTAGAGATGATGCAAAGATGACGGGTTTC 1104
Query 1129 ACGGTATATGTGAACCGGAGACCAACTAGCATGGCTGAAGTAATCAAAGATCTTGAAGAT 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 ACGGTATATGTGAACCGGAGACCAACTAGCATGGCTGAAGTAATCAAAGATCTTGAAGAT 1164
Query 1189 CAGTTCACAACAATTTGTGATGCGGCTAAGGAAGTCTCGGGGCTATTGGAAGCTGGTAGA 1248
|||||| |||| ||||||||||||||||||||||| || ||||||||||||||| |||||
Sbjct 1165 CAGTTCGCAACCATTTGTGATGCGGCTAAGGAAGTTTCAGGGCTATTGGAAGCTAGTAGA 1224
Query 1249 GCTCAATACACATCATCCTTTAATGACCATAGTGCCAGGAAAATGCTGAATCCAGTAGCG 1308
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1225 GCTCAATACACATCATCCTCCAATGACCATAGTGCCAGGAAAATGCTGAATCCAGTAGCG 1284
Query 1309 TTGTTCCGCTCGGGTTCATCAAGATCTTCCTCGTCAAGATTCTTGATCACTTCTTCTGGT 1368
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1285 TTGTTCCGCTCGGGTTCATCAAGATCTTCCTCTTCAAGATTCTTGATCACTTCTTCTGGT 1344
Query 1369 GGTTCAAGAGAGAGCGGGTCTGAAAGCAGAAGCGATGTTTCAGATGAATCTTGCATGATT 1428
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1345 GGTTCGAGAGAGAGCGGGTCTGAAAGCAGAAGCGATGTTTCAGATGAATCTTGTATGATT 1404
Query 1429 TCAGGTAGCCACCAAACAACATTGGACAGACTTTTCGCGTGGGAGAAGAAACTCTATGAT 1488
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1405 TCTGGTAGCCACCAAACAACATTGGACAGACTTTTCGCGTGGGAGAAGAAACTCTACGAT 1464
Query 1489 GAAGTTAGGTCTGGAGAACGTGTTCGAAGAGCATATGAAAAGAAATGTATGCAGCTGAGG 1548
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1465 GAAGTTAGGTCTGGAGAACGTGTTCGAAGAGCATATGAGAAGAAATGTATGCAACTGAGG 1524
Query 1549 AATCAGGACGTGAAAGGAGATGATCCGCTTGCGGTTGATAAAACTAGGGCTACTATCAGA 1608
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1525 AATCAGGACGTGAAAGGAGATGATCCGCTTGCGGTTGATAAAACTAGGGCTACGATCAGA 1584
Query 1609 GATCTAGATACACAGATCAAGGTGTCAATACACTCCATTGAATCCATCTCCAAAAGAATC 1668
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1585 GATCTAGACACACAGATCAAGGTGTCAATACACTCCATTGAATCCATCTCCAAAAGAATC 1644
Query 1669 GAGACTCTTCGTGACCAAGAACTGTTGCCTCAGCTTCTTGAGCTCGTTGAAGGATTAACA 1728
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1645 GAGACTCTTCGTGACCAAGAACTATTGCCTCAGCTTCTTGAGCTCGTTGAAGGATTAACA 1704
Query 1729 AGGATGTGGAAAGTAATGGCGGAAAGTCACCAGATACAGAAACGAACACTAGACGAAGCC 1788
|||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 1705 AGGATGTGGAAAGTGATGGCAGAAAGTCACCAGATACAGAAACGAACACTAGATGAAGCC 1764
Query 1789 AAACTGTTACTTGCAGGCACACCGGTTTCAAAGCGTCACAAGAAGAGACAACCTCCAATA 1848
||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1765 AAACTGTTACTTGCAGGGACACCAGTTTCAAAACGTCACAAGAAGAGACAACCTCCAATA 1824
Query 1849 ATGCCAGAGGCTATTAACTCTCAAAGATTAGCTCAATCTGCTTTGAATCTTGAAGCTCAG 1908
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1825 TTGCCAGAGGCTATTAACTCTCAAAGATTAGCTCAATCTGCTTTGAATCTTGAAGCTCAG 1884
Query 1909 CTTCGAAACTGGAGAACCTGTTTTGAATTCTGGATCACCTCTCAGAGATCCTACATGAAA 1968
||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1885 CTTCGAAACTGGAGAGCCTGTTTTGAATTCTGGATCACCTCTCAGAGATCCTATATGAAA 1944
Query 1969 GCATTATCTGGTTGGCTTCTAAGATGTTTCAGATGTGATCCTGACCCCGAAAAAGTTAGA 2028
|||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct 1945 GCATTATCCGGTTGGCTTCTCAGATGTTTCAGATGCGATCCTGACCCCGAGAAAGTTAGA 2004
Query 2029 TTATCCTCATGTCTTCACCCGATATACCGAGTCTGCATTCAATGGTCAAGGTTGCTTAAC 2088
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2005 TTATCCTCATGTCCTCACCCGATATACCGAGTCTGCATTCAATGGGCAAGGTTGCTTAAC 2064
Query 2089 AGCTTGAATGAAAAACCAGTTTTGGACAAACTTGAGTTCTTTGCCTCAGGGATGGGTTCA 2148
|||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2065 AGCTTGAACGAGAAACCGGTTTTGGACAAACTTGAGTTCTTTGCCTCAGGGATGGGTTCA 2124
Query 2149 ATATATGCAAGGCAAGTTAGGGAAGATCCAAACTGGAGTGGAAGCGGGTCAAGGAGATAC 2208
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 2125 ATATATGCAAGGCAAGTTAGAGAAGATCCAAATTGGAGTGGAAGCGGGTCAAGGAGATAT 2184
Query 2209 TCCGGGTCAGAAAGCATGGAGCTTGTAGTGGCTGATAAGGGAGAAGAAGATGTTGTGATG 2268
|||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||
Sbjct 2185 TCCGGGTCAGAAAGCATGGACCTTGTGGTGGCTGATAAGCTAGAAGAAGATGTTGTGATG 2244
Query 2269 ACTGCTGAGAAACTTGCAGAGGTTGCTGTGAAGGTTCTCTGCCATGGAATGTCTGTTGCA 2328
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2245 ACTGCTGAGAAACTTGCAGAGGTTGCAGTGAAGGTTCTCTGCCATGGAATGTCTGTTGCA 2304
Query 2329 GTTAGTTCACTAGCTGAGTTTTCCATCAACTCGGCCGATGAACACTCGAAGCTTGTTAGC 2388
|| |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||| |
Sbjct 2305 GTGAGTTCACTCGCTGAGTTTTCCATCAACTCGGCTGATGAACACTCAAAGCTTGTTAAC 2364
Query 2389 CAACCAGCAGACGATGCGTCGGAGCAGCAGCCCCCGGATGTAAATTTCAATTCCTAG 2445
|||||||| |||||| | ||||||||||||||| |||||||||||||||||||||||
Sbjct 2365 CAACCAGCGGACGATACATCGGAGCAGCAGCCCGCGGATGTAAATTTCAATTCCTAG 2421
> Ahg491740 jgi|Araly1|491740|fgenesh2_kg.7__1173__AT4G30130.1
Length=2363
Score = 852 bits (461), Expect = 0.0
Identities = 1031/1300 (79%), Gaps = 63/1300 (5%)
Strand=Plus/Plus
Query 1126 TTCACGGTATA-TGTGAACCGGAGACCAACTAGCATGGCTGAAGTAATCAAAGATCTTGA 1184
||||| || || | |||| || || || || || ||||| ||||| || |||| ||||||
Sbjct 1033 TTCACTGTGTACT-TGAATCGAAGGCCGACGAGTATGGCAGAAGTTATTAAAGGTCTTGA 1091
Query 1185 AGATCAGTTCAC-AACAATTTGTGA-TGC-GGCTAAGGAAGTCTCGGGGCTATTGGAAGC 1241
||||||||| | | | || ||| | || || ||| ||||||||||| || ||||||||
Sbjct 1092 AGATCAGTTTGCGATC-ATATGT-ACCGCTGG-TAAAGAAGTCTCGGGTCTGTTGGAAGC 1148
Query 1242 TGGTAGAGCTCAATACACATCATCCTTTAATGACCAT-AGTGCCAGGAAAATGCTGAATC 1300
| || ||| ||||| ||| |||||| |||||| | | ||||||| |||||||||||| |
Sbjct 1149 TAGTCGAGTTCAAT--ACA-CATCCTCTAATGAAC-TCAGTGCCATGAAAATGCTGAACC 1204
Query 1301 CAGTAGCGTTGTTCCGCTC--G-GGTTCATCAAGA---TCTTCCTCGTCAAGATTCTTGA 1354
| ||||| ||||||||||| | || ||||||||| |||||||| ||||||||||| |
Sbjct 1205 CGGTAGCTTTGTTCCGCTCAGGCGGCTCATCAAGATCTTCTTCCTCATCAAGATTCTTAA 1264
Query 1355 TCA-CTTCTTCTGGTGGTTCAAGAGAGAGCGGGTCTGAAAGCAGAAGCG-ATGTTTCAGA 1412
||| | |||||||| ||||| || | ||| | |||||||| || |||| || |||| ||
Sbjct 1265 TCAGC-TCTTCTGGAGGTTCCAGGGCGAGTGAATCTGAAAGAAGCAGCGAAT-TTTCGGA 1322
Query 1413 TGAATCTTGCATGATTTCAGGTAGCCACCAAACAACATTGGACAGACTTTTCGCGTGGGA 1472
|||||||| ||| ||||||||||||| ||| ||||||||||| |||| | |||||||||
Sbjct 1323 AGAATCTTGTATGCTTTCAGGTAGCCATCAATCAACATTGGACCGACTATACGCGTGGGA 1382
Query 1473 GAAGAAACTCTATGATGAAGTTAGGTCTGGAGAACGTGTTCGAAGAGCATATGAAAAGAA 1532
||||||||||||||||||||| | ||||||||| || | || | ||||||||||||||
Sbjct 1383 GAAGAAACTCTATGATGAAGTCAAGTCTGGAGATCGAATACGGATCGCATATGAAAAGAA 1442
Query 1533 ATGTATGCAGCTGAGGAATCAGGACGTGAAAGGAGATGA-TCCGCTTGCGGTTGATAAAA 1591
|||| || ||||||||||||||| |||||||||| ||| || || || ||||||||||
Sbjct 1443 ATGTTTGGTGCTGAGGAATCAGGATGTGAAAGGAGTTGACTCTTCT-GCAGTTGATAAAA 1501
Query 1592 CTAGGGCTACTATCAGAGATCTAGATACACAGATCAAGGTGTCAATACACTCCATTGAAT 1651
|||| ||||| || ||||||||| |||| ||||||||||| || |||||||| || || |
Sbjct 1502 CTAGAGCTACAATTAGAGATCTACATACTCAGATCAAGGTCTCCATACACTCAATAGAGT 1561
Query 1652 CCATCTCCAAAAGAATCGAGACTCTTCGTGACCAAGAACTG-TTGCCTCAGCTTCTTGAG 1710
| ||||| |||| |||||||||||||| |||||||||||| || || ||||||||||||
Sbjct 1562 CTATCTCTGAAAGGATCGAGACTCTTCGCGACCAAGAACTGCTT-CCGCAGCTTCTTGAG 1620
Query 1711 CT-CGTTGAAGGATTAACA-AGGATGTGGAAAGTAATGGCGGAAAGTCACCAGATACAGA 1768
|| | || |||||||| | || ||||||||||| ||||| || |||||||||||||||
Sbjct 1621 CTTC-TTCAAGGATTAGCTCAG-ATGTGGAAAGTGATGGCAGAGTGTCACCAGATACAGA 1678
Query 1769 AACGAACACTAGACGAAGCCAAACTGTTACTTGCAGGCACACCGGTTTCAAAGCGTCACA 1828
| |||||| | ||||||||||| || ||||||||| |||||| || | || |||||||
Sbjct 1679 AGCGAACATTGGACGAAGCCAAGCTATTACTTGCAACCACACC--TT-CTAACCGTCACA 1735
Query 1829 AGAAG-AGACAACCTCCAA-TAATGCCAGAGGCTATTAACTCTCAAAGATTAGCTCAATC 1886
||||| | ||||| | | | | || ||| || ||||||||||||||||||| |||
Sbjct 1736 AGAAGCA-ACAACATACTTCTC-TACCGGAG---ATCAACTCTCAAAGATTAGCTCGATC 1790
Query 1887 TGCTTTGAATCTTGAAGCTCAGCTTCGAAACTGGAGAACCTGTTTTGAATTC-TGGATCA 1945
|| ||| |||| | ||||||||||||||||||||| ||| || || | |||||||
Sbjct 1791 AGCATTGCATCTCGTGGCTCAGCTTCGAAACTGGAGAGCCTCCTTCCAAG-CATGGATCA 1849
Query 1946 CCTCTCAGAGATCCTACATGAAAGCATTATCTGGTTGGCTT-CTAAGATGTTTCAGATGT 2004
| || || ||||||||| || | ||| | || ||| || || ||||| |||||||||
Sbjct 1850 CATCCCAAAGATCCTACGTGCTTTCTTTAACCGGGTGG-TTACTCAGATGCTTCAGATGT 1908
Query 2005 GATCCTGACCCCGAAAAAGTTAGATTATCCTCATGTCTTCACCCGATATACCGA-GTCTG 2063
|| |||||||| || ||||| ||| || | || |||| |||||| || || || |||||
Sbjct 1909 GACCCTGACCCAGAGAAAGTCAGACTAACGTCTTGTCCTCACCCAATCTAT-GAAGTCTG 1967
Query 2064 CATTCAATGGTCAAGGTTGCTTAACAGCTTGAATGAAAAACCAGTTTTGGACAAACTTGA 2123
||| |||||||||||||| || ||| | ||||| || || ||||| | |||||||| ||
Sbjct 1968 CATCCAATGGTCAAGGTTACTCAACGGGTTGAACGAGAAGCCAGTACTAGACAAACTCGA 2027
Query 2124 GTTCTTTGCCTCAGGGATGGGTTCAATATATGCAAGGCAAG-TTAGGGAAGATCCAAA-C 2181
||||||||||| ||||||||| |||| ||||| | || | |||| ||||| || |
Sbjct 2028 TTTCTTTGCCTCTGGGATGGGTGCAATCTATGCTCGTCA-GCTTAGAGAAGACCCGTTTC 2086
Query 2182 TGGAGTGGA-AGCGGGT-CAAGGA-GATACTCCGGGTCA-GAAAGCATGGAGCTTGTAGT 2237
|| | | || ||| | |||| | ||||| || || || |||||||||||||| |
Sbjct 2087 CGG--TA-ACAGATGGTTCGAGGAAG-TACTCAGGA-CAAGAGAGCATGGAGCTTGTTGA 2141
Query 2238 GGCTGATAAGG-GAGAAGAAGATGTTG-TGATGACTGCTGAGAAACTTGCAGAGGTTGCT 2295
||||| || | | ||||| || | | |||||| ||| |||||||| || ||| ||||
Sbjct 2142 AGCTGAAAAAGTG-GAAGAGGA-GAAGATGATGAGTGCAGAGAAACTGGCTGAGATTGCA 2199
Query 2296 GTGAAGGTTCTCTGCCATGGAATGTCTGTTGCAGTTAGTTCACTAGCTGAGTTTTCCATC 2355
|| || || ||||||||||||||||| |||||||| || |||||||| |||||||||||
Sbjct 2200 GTTAAAGTACTCTGCCATGGAATGTCAGTTGCAGTGAGCTCACTAGCCGAGTTTTCCATT 2259
Query 2356 AACTCGGCCGATGAACACTCGAAGCTTGTTAGCCAACCAG 2395
| ||| || ||||||||||||||||| |||| ||| ||||
Sbjct 2260 AGCTCAGCTGATGAACACTCGAAGCTCGTTACCCATCCAG 2299
> Ahg942134 jgi|Araly1|942134|scaffold_602678.1
Length=2344
Score = 54.7 bits (29), Expect = 3e-06
Identities = 29/29 (100%), Gaps = 0/29 (0%)
Strand=Plus/Plus
Query 1465 GCGTGGGAGAAGAAACTCTATGATGAAGT 1493
|||||||||||||||||||||||||||||
Sbjct 1248 GCGTGGGAGAAGAAACTCTATGATGAAGT 1276
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92140302655
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5