BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G19390.1
Length=4414
Score E
Sequences producing significant alignments: (Bits) Value
Ahg480532 jgi|Araly1|480532|fgenesh2_kg.3__3233__AT2G19390.1 6863 0.0
Ahg491781 jgi|Araly1|491781|fgenesh2_kg.7__1214__AT4G29790.1 2691 0.0
> Ahg480532 jgi|Araly1|480532|fgenesh2_kg.3__3233__AT2G19390.1
Length=4416
Score = 6863 bits (3716), Expect = 0.0
Identities = 4212/4445 (95%), Gaps = 60/4445 (1%)
Strand=Plus/Plus
Query 1 AGTACTAGTTTCATCGCCGATCAAAAACTAGCAACGAACCAATGCACCTTCGATCCCGTC 60
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1 AGTCCTAGTTTCATCGCCGATCAAAAACTAGCAACGAACCAATGCGCCTTCGATCCCGTC 60
Query 61 CTCTCATGGCCACGTTGCTTGATTTCGATTTCGAGCTTCTTATTTTTTATTTTCTTCACG 120
||||||||| |||||||||||||||||||||||| | | |||||| |||| ||||||
Sbjct 61 ATCTCATGGCAACGTTGCTTGATTTCGATTTCGAG---C-T-TTTTTT-TTTT-TTCACG 113
Query 121 AAACTCGTTGAAACGATCTAATCTTCAACATCTTTGATTTTTGGTGTTGGGGTTTGTTGT 180
|||||| ||||||||||||||| |||| | |||||||||||||| ||||| |||||||
Sbjct 114 -AACTCGCTGAAACGATCTAATCCTCAAAAGCTTTGATTTTTGGTATTGGGTTTTGTTG- 171
Query 181 TATCTGCGG-AATTTTTGTTTCCTTTGCCGCGGTTTTTGATTCAGAGGGTTTAATTATAG 239
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 172 TATCTGCGGAAATTTTTGTTTCCTTTGCCGCGGTTTGTGATTCAGAGGGTTTAATTATAG 231
Query 240 CTGTCTAA-T-TG--TGTCCGGTGTTCAAC--A--AACTAAGTGGAAGTGAATTTTGGAG 291
|||||||| | || ||||||||| ||||| | |||||||||||||||||| ||||||
Sbjct 232 CTGTCTAATTGTGTCTGTCCGGTGCTCAACGAACGAACTAAGTGGAAGTGAATATTGGAG 291
Query 292 GACTTTCTTAACACATATCA-CTT-GGATTCTC-TGTGCATTTTAAATCAATTATTTGAG 348
|| | | ||| ||| | | || || | | |||||| ||||||||||||||||||
Sbjct 292 GAATAT-TTATCACCT-GGATTTTCTGA-TAGCAGGTGCATCTTAAATCAATTATTTGAG 348
Query 349 TCTGAGAAATCAGCATTTATGTGCTACAGCTTGTCATGCTCCAGTGTGTATTCAGTGTTT 408
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 349 ACTGAGAAATCAGCATTTATGTGCTACAGCTTGTCATGCTCCAGTGTGTGTTTAGTGTTT 408
Query 409 ATTATAAAATATAAGACTTTCGAGAGCTGAGGGAATGTCAGCACCTGGGAAGTTTGATTA 468
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 409 ATTATAAAACATAAGACTTTCGTGAGCTGAGGGAATGTCAGCACCTGGGAAGTTTGATTA 468
Query 469 TTCTTCTGGTGGGCTAGATAGGCCTCTATACAGATCTAACTTTGCCGCACAGATGGAAAG 528
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 469 TTCTTCTGGTGGGCTAGATAGGCCTCTCTACAGATCTAACTTTGCCGCACAGATGGAAAG 528
Query 529 ATCGAGTAGCTTTCGCGAGTCCATGGAACATCCTGTCCCATCTCATCCAATCATGTTGAG 588
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct 529 ATCGAGTAGCTTTCGCGAGTCCATCGAACATTCTGTCCCATCTCATCCAATCATGTTGAG 588
Query 589 GACCACTTCACCAATAGCACAAACTGATGTAACAAATTTCTTTCAGTGTTTGCGTTTTGA 648
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 589 GACCACTTCACCAATAGCACAAACCGATGTAACAAATTTCTTTCAGTGTTTGCGTTTTGA 648
Query 649 TCCTAAGGTGGTTGCCGCGGATCACAAGTCTATTCGTCAAGGTGACTTTAAGCGGCATGT 708
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 649 TCCTAAGGTGGTTGCCGCGGATCACAAGTCTATTCGTCAAGGTGACTTTAAGCGACATGT 708
Query 709 GAGTATTGCTCTTGGAATACTAGGCGATGAGTCTCCTAGTGGATCTTTAAAAGGGAAGTT 768
||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| |||||
Sbjct 709 TAGTATTGCTCTTGGAATACAAGGAGATGAGTCTCCTAGTGGATCTTTGAAAGGAAAGTT 768
Query 769 TATTCCATCTCCTATTCCAGAAGAGATCAAAAGATTTAAGGCTGGTCTGCGCGAAAACAA 828
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 769 TATTCCATCGCCTATACCAGAAGAGATCAAAAGATTTAAGGCTGGTCTGCGCGAAAACAA 828
Query 829 TGTGAAGGCCAGGGAGCGTGTAAAAATTTTCAACGAAGCTTCTTCTGTATTTAACAAGTT 888
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 829 TGTGAAGGCCAGGGAGCGCGTAAAAATTTTCAACGAAGCTTCTTCTGTATTTAACAAGTT 888
Query 889 TTTCCCAAGTGTACCTACAAAGAAAAGGTCTCGACCTGAAGGGTTTTCTGGTGACCGCTC 948
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 889 TTTCCCAAGTGTACCTACAAAGAAAAGGTCTCGACCTGAAGGGTTTTCTGGTGA----TC 944
Query 949 TGGTGATCGCTTGGTATCAGGACCAGGCCTAGGTAAAATGGGAATTCAGGGTCAGACCCT 1008
| | |||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 945 ----G---G-TTGGTATCAGGACCAGGCCTTGGTAAAATGGGAATTCAGAGTCAGACCCT 996
Query 1009 GGCTGGTGGTTTTGAGCTTGACCAGCAAAAGTTGGATGAACGACCTAAAAGTGGTGTTCC 1068
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 997 GGCTGGTGGTTTTGAGCTTGACCAGCAAAAGTTTGATGAACGACCTAAAAGTGGTGTTCC 1056
Query 1069 AAATAAGCGAACACGTACTTCCATGATGGATGTTCGAAACAACTGTATTGTTCGACAGTC 1128
||||||| ||||||||||||| |||||||||||||||| ||| | |||||||||||||||
Sbjct 1057 AAATAAGAGAACACGTACTTCTATGATGGATGTTCGAAGCAATTCTATTGTTCGACAGTC 1116
Query 1129 AGCGGCTGTAGACAAAGATAAAGAAATAATGCGGGTGGGAAATCATAATGCAGTTCAGGG 1188
||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 1117 GGCGGCTGTAGACAGAGATAAAGAAATAATGCGGGTAGCAAATCATAATGCAGTTCAGGG 1176
Query 1189 TGAAGATCGAACTTCTACTGGTATTGATGGTTGGGAAACGTCAAAAATGAAGAAAAAACG 1248
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1177 TGAAGATCGAACTTCAATTGGTATTGATGGTTGGGAAACGTCAAAAATGAAGAAAAAACG 1236
Query 1249 CTCCTCTATTAATGCGGACTGTCATCCTAACTTGGCTTCAAATAAAGTGGTTGATGGTTA 1308
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1237 CTCCTCTATTAATGCGGACTGCCATCCTAACTTGGCTTCAAATAAAGTGGTTGATGGTTA 1296
Query 1309 CCGAGACTTGAAGCAGGGCATACAACAGAAACCAACAGGCGATTCCCGGTCAAGAGTGAA 1368
||||||||||||||||||||||||||||||| |||||||||| |||||||| ||| ||||
Sbjct 1297 CCGAGACTTGAAGCAGGGCATACAACAGAAATCAACAGGCGACTCCCGGTCGAGATTGAA 1356
Query 1369 TGGTGACTCAAACATGTTCAGGCAATCGGCTGGTAATGGAGCTACTGGGTATGGAAGATC 1428
|||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||
Sbjct 1357 TGGTGACTCAAACATGTTAAGGCAATCGACTAGTAATGGAGCTACTGGGTATGGAAGATC 1416
Query 1429 TGATAGCCTCTCTCATCAGACGAGCTTGGCTGGGCATTCTCCACTGGCGAGGGTTGATTC 1488
||||| | |||| || ||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 1417 TGATAACATCTCCCACCAGACGAGCCTGGCTGGGCATTCTCCACTGCCGAGGGTTGATTC 1476
Query 1489 TGACCATAACTCTTTGTACAGTGAGAAGAGAGAACGCTCCATTGTCTCAGATAAGGAAAG 1548
||| ||||| |||||||||| |||||||||||||||||| |||| |||||||||||||||
Sbjct 1477 TGATCATAATTCTTTGTACAATGAGAAGAGAGAACGCTCGATTGGCTCAGATAAGGAAAG 1536
Query 1549 GGTGAATCTCAGGGGCGTCAACAAGTCAAATATTCATGATGAATTCAATTCTTCAAGTCT 1608
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1537 GGTGAATCTCAGGGGAGTCAACAAGTCAAATATTCATGATGAATTCAATTCTTCAAGTCT 1596
Query 1609 GGTTTCAAACACAAAAACAAATGCTTCAGTTCGTGGACCTAGATCAGGATCGGGGTTACC 1668
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1597 GGTTTCAAACACAAAAACAAATGCTTCAGTTCGTGGACCTAGATCAGGATCGGGGCTACC 1656
Query 1669 ACCAAAACTGTCTCCAGGACTCCATAACACTCCGTCCCCGATTGAATGGGATATCTCTGG 1728
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1657 ACCAAAACTGTCTCCAGGACTCCATAACACTCCGTCCCCAATTGAATGGGATATCTCTGG 1716
Query 1729 CTGTACGAATAAGCCTCCAACATTGTCAGGAGTTACACAACGCAAGCGTATGACATCAAA 1788
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1717 CTGTACGAATAAGCCTCCAACATTGTCAGGAGTTACACATCGCAAGCGTATGACATCAAA 1776
Query 1789 TCGTTCTTCATCACCACCTGTCACTCAGTGGGCCAGTCAAAGACCACAAAAGATATCCCG 1848
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TCGGTCTTCATCACCACCTGTCACTCAGTGGGCCAGTCAAAGACCACAAAAGATATCCCG 1836
Query 1849 GATAGCAAGAAGGACAAATTTAGTGCCCATTGTTTCTAGTCAGGACGAAGTTCCCTACTC 1908
||||||||| ||||||| |||||||||||||||||||||| | |||||||||||||||||
Sbjct 1837 GATAGCAAGGAGGACAACTTTAGTGCCCATTGTTTCTAGTAACGACGAAGTTCCCTACTC 1896
Query 1909 TGATAATATATCAGATGTTGGTTGTAGTGAAACTGGGTTTGGATTTCATAAACGTTCACC 1968
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1897 TGATAATATATCAGATGCTGGTTGTAGTGAAACTGGGTTTGGATTTCATAAACGTTCGCC 1956
Query 1969 AGCTGCTTCTCCTCAATTGAAACTAAAAGGTGAAAGCAGCTTCTCCACTGCAGCCTTATC 2028
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1957 AGCTGCTTCTCCTCAATTGAAGCTAAAAGGTGAAAGCAGCTTCTCCACTGCAGCCTTATC 2016
Query 2029 AGAAAGTGAAGAATCTGGCCACCCTGAGATCAAATCTAAAGACAAAGGTAAACAGTCTGA 2088
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 2017 AGAAAGTGAAGAATCTGGCCCCCCTGAGATCAAATCTAAAGACAAGGGTAAACAGTCTGA 2076
Query 2089 TGAGGTTGATGGGAAAGCTGCACAGAATATTCCTAGAGTGTCCATCCCTGCTTTACAATC 2148
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2077 TGAGGTTGATGGGAAAGCTGCACAAAATATTCCTAGAGTGTCCATCCCTGCTTTACAATC 2136
Query 2149 AAGAAAAAGTAATAAGCCTGCAGCTGGTGAAGAGATTGGAGATGGTGTGAGAAGGCAAGG 2208
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2137 AAGAAAAAGTAACAAGCCTGCAGCTGGTGAAGAGATTGGGGATGGTGTGAGAAGGCAAGG 2196
Query 2209 AAGGACAGGCCGTGGCTTTTCTTCCACGAGGTCTCTTAACCCAAATGGAGTAAATAAGCT 2268
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct 2197 AAGGACAGGCCGTGGCTTTTCTTCCACGAGGTCTCTTAACCCAAATGGAGTAGATAAACT 2256
Query 2269 TAAGAATGTTGGAACAGCAAAACATCTTCGCAGTGCAAGACCTATTTTTGACAAGAATGA 2328
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 2257 TAAGAATGTTGGAACAGCTAAACATCTTCGCAGTGCAAGACCTATTTTTGACAAGAGTGA 2316
Query 2329 AAGTAAGGTGGGTCGTCCACCCACTAGGAAACTATCTGATCGTAAGGCCTACAAACGTCA 2388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2317 AAGTAAGGTGGGTCGTCCACCCACTAGGAAACTATCTGATCGTAAGGCCTACAAACGTCA 2376
Query 2389 GAGAGCTACGGCAACAAATGCTCCAACACTAGATTTTCATGTTGGTTCAAATGATGGTCG 2448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2377 GAGAGCTACGGCAACAAATGCTCCAACACTAGATTTTCATGTTGGTTCAAATGATGGCCG 2436
Query 2449 TGAGGAGCTACTGGCAGCTGTCAACTCAGCTATAAATATTGCTCAGAATTTTCCCAACTC 2508
||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||
Sbjct 2437 TGAGGAGCTACTGGCAGCTGTCAACTCAGCTGTAAATTTTGGTCAGAATTTTCCCAACTC 2496
Query 2509 TTTCTGGAAGCAAATGGAGCGCTACTTCGGCTATATATCTGATGATCATATCAATTTCTT 2568
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 2497 TTTCTGGAAGCAAATGGAGCGCTACTTTTGCTATATATCTGATGATCATATCAATTTCAT 2556
Query 2569 GAAACAACAGGGAGAACTCTCCTCCATGGGTCCGACGCCCGTTTTGACATCTTCTGAGTT 2628
||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||
Sbjct 2557 GAAACAACAGGGAGAACTCTCCTCCATGGGTCCTACGCCCATTTTGACATCCTCTGAGTT 2616
Query 2629 TGATAGCCCTGTGTTTCCTGAGGAACTTGCAACTAGCAGGGCGGATTCCAAGGCTTCTCC 2688
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2617 TGATAGCCGTGTGTTTCCCGAGGAACTTGCAACTAGCAGGGCGGATTCCAAGGCTTCTCC 2676
Query 2689 ACTGTACCAGAGATTGCTATCAGCCTTGATATCTGAGGACTCAATGGGTGTAAATGAAGA 2748
|||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||
Sbjct 2677 ACTGTACCAGAGATTGCTATCAGCTTTGATTTCTGAGGACTCGATGGGTGTAAATGAAGA 2736
Query 2749 TTTACAAGTTGAT----------CT-TG-A---CGATGACTCAGAATTCAGTGTTCTGAA 2793
||||||||||||| || || | |||||||||||||||||||||||||||
Sbjct 2737 TTTACAAGTTGATGGATTTGGGGCTATGCATGACGATGACTCAGAATTCAGTGTTCTGAA 2796
Query 2794 TAATATGGAGTTCAATGGGTTTAGGAACAATGAAAGGCTGGAACTTGATGAATCAGAAAA 2853
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 2797 TAATATGGAGTTCAATGGGTTTAGAAACAATGAAAGGCTGGAACTTGATGAATCAGAAGA 2856
Query 2854 TGATGGGTCTGCAATTTTGTTCAAGGGTGTTGATAAGTCAGCCCACCACTGCAATGGCAA 2913
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2857 TGATGGGTCTGCGATTTTGTTCAAGGGTGTTAATAAGTCAGCCCACCACTGCAATGGCAA 2916
Query 2914 ATTTCCAGATAATTCACCCATTGACTTCGTAGATATTCAATATGATAAATTGGGGATAGA 2973
||||||||||| |||||||||||||||| | || ||||||||||||||||||||||||||
Sbjct 2917 ATTTCCAGATACTTCACCCATTGACTTCTTGGACATTCAATATGATAAATTGGGGATAGA 2976
Query 2974 TGAAAAGATTTATCTGGAAGCCCAGTCTCTTGGAATATCCATAGA-CCTAATGCCTAGTA 3032
|||||||||||||||||||| ||||||||||||||||||| |||| || |||||||||||
Sbjct 2977 TGAAAAGATTTATCTGGAAGTCCAGTCTCTTGGAATATCCTTAGAACC-AATGCCTAGTA 3035
Query 3033 TCTCAAACGTGGAGGATGAAGGTATTGCTGACGAAATTAAAAAGTTGGAGGAGGCTATCT 3092
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 3036 TCTCAAACGTGGAGGATGAAGGAATTGCGGACGAAATTAAAAAGTTGGAGGAGGCTATCT 3095
Query 3093 GCAACGAGGGTTCTAAGAAGAAAGAGATTGTGGATAGGCTACTAAAGCCTGCCATCGAGA 3152
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3096 GCAACGAGGGTTCCAAGAAGAAAGAGATTGTGGATAGGCTACTAAAGCCTGCCATAGAGA 3155
Query 3153 TGAAAGAACTTCAGGAGAAGGAGCTTGATCAACTTGGTTATGAAAAGCTCATCGAGATGG 3212
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3156 TGAAAGAATTTCAGGAGAAGGAGCTTGATCAACTTGGTTATGAAAAGCTCATCGAGATGG 3215
Query 3213 CATATGAAAAAAGCAAGGCAAGTCGGCGTCATCACAACGCTGGTGGAAAGAATTCCAACA 3272
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3216 CATATGAAAAGAGCAAGGCAAGTCGGCGTCATCACAACGCTGGTGGAAAGAATTCCAATA 3275
Query 3273 ACAAGATTTCAAAGCAGGCTGCATTGGCTTTTGTTAGAAGGACGCTTGAACGATGCCATC 3332
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3276 ACAAGATTTCAAAGCAGGCTGCATTGGCTTTTGTTAGAGGGACGCTTGAACGATGCCATC 3335
Query 3333 AATTCGAAAAGACGGGCAA-AAGCTGCTTTAGTGAGCCTGAAATTAAGGATATGTTCATT 3391
|||||||||||||||| || ||||||||| |||||||||||| |||||||||||||||||
Sbjct 3336 AATTCGAAAAGACGGG-AAGAAGCTGCTTCAGTGAGCCTGAATTTAAGGATATGTTCATT 3394
Query 3392 GCGGGGTTGGCAACAGCTGAAGATACTCTCATGGACAAGGAGTATAATACGTCAACTTCA 3451
|| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 3395 GCCGGGTTGGCAACAGCCGAAGATACTCTCATGGACAAGGAGTATAATCCGTCAACTTCA 3454
Query 3452 ACGCCCATGGGCTCACAGCCAAGCTCTTCGCTGGCACT-CATTGGGCAGAACTCGGAGAA 3510
|| ||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||
Sbjct 3455 ACACCCATGGGCTCACAGCCAAGCTCTTCGTTGGCA-TGCATTGGGCAGAACTCGGAGAA 3513
Query 3511 CTATGCCAAATCTTCTGATGTTCTACCATCTGAAAATGCTTTACTAGAACAAACGACGGG 3570
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3514 CTATGCCAGTTCTTCTGATGTTCTACCATCTGAAAATGCTTTACTAGAACAAACGATGGG 3573
Query 3571 GAAAGAAGATACAGCATGGTCCAATAGGGTCAAGAAGAGAGAGTTGCTGCTCGATGATGT 3630
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3574 GAAAGAAGATACAGCATGGTCCAATAGGGTCAAGAAGAGAGAGTTGCTGCTTGATGATGT 3633
Query 3631 TGGTATTGGGACACAACTCTCAAGTAATACAAAGGGGAAGAGAAGCGACAGGGACAGAGA 3690
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3634 TGGTATTGGGGCACAACTCTCAAGTAATACAAAGGGGAAGAGAAGTGACAGGGACAGAGA 3693
Query 3691 TGGGAAAGGGCAGGCTTCATCTAGAGGCGGAACTAATAAGATCGGCCGGCCTTCCCTGTC 3750
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3694 TGGGAAAGGGCAGGCTTCATCTAGAGGCGGAACCAATAAGATCGGCCGGCCTTCCCTGTC 3753
Query 3751 CAATGCTAAGGGTGAAAGAAAAACAAAAGCAAAACCGAAGCAGAAAACAACTCAGATATC 3810
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3754 CAATGCTAAGGGTGAAAGAAAAACGAAAGCAAAACCGAAGCAGAAAACAACTCAGATATC 3813
Query 3811 TCCATCTGTTAGGGTTCCGGAGCAACCCAAACCATCGTTACCAAAACCGAATGAAGCAAA 3870
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3814 TCCATCTGTTAGGGTCCCGGAGCAACCCAAACCATTGTTACCAAAACCGAATGAAGCAAA 3873
Query 3871 CAGCGAGTATAATAACTTGGAGGCACTGGAGGAGACAGAGCCAATTCTCGATTTATCTCA 3930
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 3874 CAGCGAGTATAATAACTTGGAAGCACTGGAGGAGACTGAGCCAATTCTCGATTTATCTCA 3933
Query 3931 GTTACAAATACCAGATGGCTTAGGAGATTTTGATGCGCAACCAGGTGATATTAATTCATG 3990
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct 3934 GTTACAAATACCAGATGGCTTAGGAGATTTTGATACGCAACCAGGTGATATTAGTTCATG 3993
Query 3991 GTTTAACATGGACGACGAAGAAGATTTCGATATGACGGAGCTTGGAATACCAACGGATGA 4050
||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||
Sbjct 3994 GTTTAACATGGACGACGAAGAAGATTTCGATATCACGGAGCTTGGGATACCAATGGATGA 4053
Query 4051 TATCTCAGAGCTGAACATAAAGTTATGAGGTCACCACTCCATCTCACTCTATCTATA-TC 4109
| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 4054 TCTCTCAGGGCTGAACATAAAGTTATGAGGTCACCACTCCCTCTCACTCTATCTATAGT- 4112
Query 4110 TGTATAGTCTTGTTGGTTATACTAGTTGACAAAAAGAGAGTAAGGGAAAAGAAAAGTTTT 4169
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||
Sbjct 4113 TGTATAGTCTTGTTGGTTATACTAGTTGACAAAAAGAGCGTAAGGTAAAAGAAAATTTTT 4172
Query 4170 GCTTCCTTGGGCGAATAACCAATACAGGAAATGGGTTATTCGGATGTTAGCTCCAGAAAA 4229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4173 GCTTCCTTGGGCGAATAACCAATACAGGAAATGGGTTATTCGGATGTTAGCTCCAGAAAA 4232
Query 4230 TTAGGTCATATAGAttcttttctacatcttcttcttcttcttcttcttaggcttcttttt 4289
||||||||| ||||||||||||| |||| |||||| |||||||||||||||||||||||
Sbjct 4233 TTAGGTCATTTAGATTCTTTTCTTCATCATCTTCTCCTTCTTCTTCTTAGGCTTCTTTTC 4292
Query 4290 tcgtctttttATAACTCCGATTTCTTGGGTGAATCTCTTTGTACTTTTGTGATGGATGCT 4349
|||||| ||||||||||||||||| |||||||||||||| |||||| ||||||||||||
Sbjct 4293 -CGTCTTCTTATAACTCCGATTTCTCGGGTGAATCTCTTTTTACTTTGGTGATGGATGCT 4351
Query 4350 GGATTTGGATCCGCTGGGTAAGCTAGGTTGATAGTTAACTTCCGGCTGTAAGAAGCTGTT 4409
||||||||||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct 4352 GGATTTGGATCCGGTGGGTAAACTAGGTTGATAGTTAACTTCCGGCTCTAACAAGCTGTT 4411
Query 4410 GTGGC 4414
|||||
Sbjct 4412 GTGGC 4416
> Ahg491781 jgi|Araly1|491781|fgenesh2_kg.7__1214__AT4G29790.1
Length=4402
Score = 2691 bits (1457), Expect = 0.0
Identities = 3255/4081 (80%), Gaps = 292/4081 (7%)
Strand=Plus/Plus
Query 376 AGCTTGTCATGCT-CCA--GTGTGTATTCAGTGTTTAT-TATAAAATA-TAAGACTTTCG 430
||||||||||| | ||| ||||||| | | ||||||| |||||| | | ||| ||
Sbjct 244 AGCTTGTCATG-TACCACTGTGTGTA-T-ATTGTTTATAAATAAAACAGT-GGAC-TT-- 296
Query 431 AGAGCTGAGGGAATGTCAGCACCTGGGAAGTTTGATTATTCTTCTGGTGGGCTAGATAGG 490
| || | ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 297 AAAGTTAAGGGAATGTCAGCACCTGGGAAGTTTGATTATTCTTCTGGTGGGCCAGATAGG 356
Query 491 CC-TCTATACAGATCTAACTTTGCCGCACAGATGGAAAGATCGAGTAGCTTTCGCGAGTC 549
|| | ||||||| || ||||| || ||||| ||||||||||| ||||||||||||||| |
Sbjct 357 CCGT-TATACAGGTCCAACTTAGCTGCACAAATGGAAAGATCTAGTAGCTTTCGCGAGAC 415
Query 550 CATGGAACATCCTGTCCCATCT-C--ATCCAATCATGTTGAGGACCACTTCACCAATAGC 606
||||||||||||||| ||||| | | || | |||||| |||| |||||||||||||||
Sbjct 416 GATGGAACATCCTGTCTCATCTTCTCACCCGAGCATGTTAAGGAGCACTTCACCAATAGC 475
Query 607 ACAAACTGATGTAACAAATTTCTTTCAGTGTTTGCGTTTTGATCCTAAGGTGGTTGCCGC 666
|||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 476 ACAAACCGATGTTACAAATTTTTTTCAGTGTTTGCGTTTTGATCCTAACGTGGTTGCCGC 535
Query 667 GGATCACAAGTCTATTCGTCAAGGTGACTTTAAGCGGCATGTGAGTATTGCTCTTGGAAT 726
||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||
Sbjct 536 AGATCACAAGTCTATTCGTCAAGGTGACTTTAAGCGTCATGTGAATATCGCTCTTGGGAT 595
Query 727 ACTAGGCGATGAGTCTCCTAGTGGATCTTTAAAAGGGAAGTTTATTCCATCTCCTATTCC 786
| ||| ||||| ||||| || | | | ||||||||||| ||| |||||||||| ||
Sbjct 596 TCAAGGAGATGAATCTCCAAGCACACCCCTGAAAGGGAAGTTAATTTCATCTCCTATACC 655
Query 787 AGAAGAGATCAAAAGATTTAAGGCTGGTCTGCGCGAAAACAATGTGAAGGCCAGGGAGCG 846
||||||||||| || | |||||||||||||||||||||||||||||||||||||||||
Sbjct 656 CGAAGAGATCAAGAGGCTAAAGGCTGGTCTGCGCGAAAACAATGTGAAGGCCAGGGAGCG 715
Query 847 TGTAAAAATTTTCAACGAAGCTTCTTCTGTATTTAACAAGTTTTTCCCAAGTGTACCTAC 906
| | ||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 716 TTTGAAAATTTTCAACGAAGCTTCTTCTGTATTTAACAAGTTTTTTCCTAGTGTACCTAC 775
Query 907 AAAGAAAAGGTCTCGACCTGAAGGGTTTTCTGGTGACCGCTCTGGTGATCGCTTGG-TAT 965
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||| | |
Sbjct 776 AAAGAAAAGGTCTCGACCAGAAGGGTTTTCTAATGACCGCTCTGGTGATCGCTTGGCTTT 835
Query 966 CAGGACCAGGCCTAGGTAAAATGGGAATTCAGGGTCAGACCCTGGCTGGTGGTTTTGAGC 1025
||| ||||| | ||||||||||||||||| |||||||| ||| ||||| |||||||||
Sbjct 836 -AGGGCCAGGTATGGGTAAAATGGGAATTCAAGGTCAGACTCTGCCTGGTTGTTTTGAGC 894
Query 1026 TTGACCAGCAAAAGTTGGATGAACGACCTAAAAGTGGTG--TTCCAAATAAGCGAACACG 1083
|||||||||||||| |||| ||||||||||||||||||| || ||||||||| |||||
Sbjct 895 TTGACCAGCAAAAGCTGGACGAACGACCTAAAAGTGGTGCATT--AAATAAGCGGACACG 952
Query 1084 TACTTCCATGATGGATGTTCGAAACAACTG-TATTGTTCGACAGTCAGC-GGCTGTAGAC 1141
||||||||||||||||||||||| || || |||||||||||| |||| || |||||||
Sbjct 953 TACTTCCATGATGGATGTTCGAAGTAA-TGCTATTGTTCGACAACCAGCTGG-TGTAGAC 1010
Query 1142 AAAGATAAAGAAATAATGCGGGTGGGAAATCATAATGCAGTTCAGGGTGAAGATCGAACT 1201
| || ||||| | |||| || ||| ||||||||| ||||||||||||||||||||| ||
Sbjct 1011 AGGGAGAAAGACACAATGAGGCTGGCAAATCATAACGCAGTTCAGGGTGAAGATCGATCT 1070
Query 1202 TCTACT-GGTATTGATGGTTGGGAAACGTCAAAAATGAAGAAAAAACGCTCCT--CTATT 1258
| || | ||||||||||||||||||| ||| ||||||||||||||||| || | | ||
Sbjct 1071 T-TAATTGGTATTGATGGTTGGGAAAAGTCGAAAATGAAGAAAAAACGATC-TGGC-ATC 1127
Query 1259 AATGCGGACTG-TCATCCTAACTTGGCTTCAAATAAAG-TGGTTGATGGTTACCGAGACT 1316
|| | || || || | ||| |||||||||||||||| || |||||||||| | ||||
Sbjct 1128 AAAACAGA-TGGTCCTTCTAGTTTGGCTTCAAATAAAGCTG-TTGATGGTTATAGGGACT 1185
Query 1317 TGAAGCAGGGCATACAACAGAAACCAACAGGCGATTCCCGGTCAAGAGTGAATGGTGACT 1376
|||| |||||||||| || ||| || | || |||||||| || ||| ||||||||||||
Sbjct 1186 TGAAACAGGGCATAC--CA-AAATCAGCTGGTGATTCCCGCTCGAGATTGAATGGTGACT 1242
Query 1377 CAAACATGTTCAGGCAATCGG-CTG-GTAATGGAGCTACTGGGTATGGAAGATCTGATAG 1434
|||||||||| ||||| | || | | | ||||| ||| | ||||| ||||||||||
Sbjct 1243 CAAACATGTTAAGGCA-TGGGGCAGTG-AATGGTGCTGTTCCATATGGGAGATCTGATAA 1300
Query 1435 CCTCTCTCATCAGACGAG-CTTGGCTGGGCATTC-TC-CACTGGCGAGGGTTGATTCTGA 1491
||| ||||| ||||| || |||||| | || ||| | | || | |||| |||| ||
Sbjct 1301 CCTTTCTCAGCAGAC-AGGCTTGGCAGCGCGTTCCTTGCTCTC-C-AGGG---ATTCCGA 1354
Query 1492 CCATAACTCTTTGTACAGTGAGAAGAGAGAACGCTCCATTG-TCTCAGATAAGGAAAGGG 1550
|| | || ||||||| ||||||||||||||| | | || | ||||||||||||||||
Sbjct 1355 TCACAGTTCGTTGTACAATGAGAAGAGAGAACGAGCTACTGGT-TCAGATAAGGAAAGGG 1413
Query 1551 TGAATCTCAGGGGC-GTCAACAAGTCAAATATTCATGATGAATTCAATTCTTCAAGTCTG 1609
|||||||||||| | |||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1414 TGAATCTCAGGG-CTGTCAACAAGTCAAATATTCATGATGAATCCAATTCTTCAAGTCCG 1472
Query 1610 GTTTCAAA-CACAAAAACAAATGCTTCAGTTCGTGGACCTAGATCAGGATCGGGGTTACC 1668
|||||| | |||||| || ||||||||||||||| || ||||| ||||| ||| | ||
Sbjct 1473 ACTTCAAATC-CAAAAATAAGTGCTTCAGTTCGTGGTCCAAGATCGGGATCAGGGCTGCC 1531
Query 1669 ACCAAAACTGTCTCCAGGAC-TCCATAACACTCCGTCCCCGATTGAATGGGATATCTCT- 1726
|| ||||| ||||| || ||||||||||||| || || | ||| |||||||| | |
Sbjct 1532 GCCGAAACTTTCTCC-GGTTGTCCATAACACTCCCTCTCCAAGTGATTGGGATAT-TGTT 1589
Query 1727 GGCTGTACGAATAAGCCTCCAACATTGTCAGGAGTTACACAA-CGCAAGCGTATGACATC 1785
|||||||| || || |||||| ||||| || ||| | ||| |||||||| ||||||||
Sbjct 1590 GGCTGTACAAACAAACCTCCATTGTTGTCTGGGGTTCC-CAATCGCAAGCGCATGACATC 1648
Query 1786 AAATCGTTCTTCATCACCACCTGTCACTCAGTGGGCCAGTCAAAGACCACAAAAGATATC 1845
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1649 AAATCGGTCTTCATCACCACCTGTCACTCAATGGGCCAGTCAAAGACCACAAAAGATATC 1708
Query 1846 CCG-GATAGCAAGAAGGACAAATTTAGTGCCCATTGTTTCTA-GTCAG-GACGA-AGTTC 1901
|| | | ||||| || || || || || |||| ||||| || | || || || | |||
Sbjct 1709 TCGTGTT-GCAAGGAGAACGAACTTGGTCCCCACTGTTT-TAAG-CAATGATGACA-TTC 1764
Query 1902 CCT-ACTCTGATAATATATCAGATGTTGGTTGTAGTGAAACTGGGTTTGGATTTCATAAA 1960
| | | || ||||| || ||||||||||||||||||||||| | ||||||||| ||| |
Sbjct 1765 CGTCA-TCAGATAACATGTCAGATGTTGGTTGTAGTGAAACAAGTTTTGGATTTTATAGA 1823
Query 1961 CGTTCACCAGCTGCTTCTCCTCAATTGAAACTAAAAGGTGAAAGCAGCTTCTCCACTGCA 2020
|| || || || |||||||| ||| ||||| |||||||||||| ||||| || ||| ||
Sbjct 1824 CGCTCGCCTGCAGCTTCTCCACAAATGAAATTAAAAGGTGAAAATAGCTTGTCTACTACA 1883
Query 2021 GCCTTATCAGAAAGTGAAGAAT-CTGGCCACCCTGAGATCAAATCTAAAGACAAAGGTAA 2079
|| ||||||| ||||||||||| | | || |||||||||||||||||||||||| || ||
Sbjct 1884 GCTTTATCAGGAAGTGAAGAATTCAGCCC-CCCTGAGATCAAATCTAAAGACAAGGGAAA 1942
Query 2080 ACAGTCTGATGAGGTTGATGGGAAAGCTGCACAGAATATTCCTAGAGTGTCCATCCCTGC 2139
||| ||||||||||| |||||||| || | |||||| |||||| ||| ||||||||||
Sbjct 1943 ACAATCTGATGAGGTCAATGGGAAAACTTCTCAGAATGTTCCTAAAGTCTCCATCCCTGG 2002
Query 2140 TTTACAATCAAGAAAAAGTAATAAGCCTG-CAGCTGGTGAAGAGATTGGAGATGGTGTGA 2198
||| ||||| ||||||| | |||| || | |||| |||||| |||| ||||||||||
Sbjct 2003 TTTGCAATCGAGAAAAA--AC-AAGCTTGTCT-CTGGAGAAGAGCTTGGGGATGGTGTGA 2058
Query 2199 GAAGGCAAGGAAGGACAGGCCGTGGCTTTTCTTCCACGAGGTCTCTTAACCCAAATGG-A 2257
| || |||||||||||||||||||| ||| |||| || |||||| | |||||| ||| |
Sbjct 2059 GGAGACAAGGAAGGACAGGCCGTGGGTTTGCTTCAACAAGGTCTGTCAACCCAC-TGGGA 2117
Query 2258 GTAAATAAGCTTAAGAATGTTGGAACAGCAAAACATCTTCGCAGTGCAAGACCTATTTTT 2317
|||| | | || | || | |||||||||||| ||||||||||||||| || || |
Sbjct 2118 GTAA-TGA----AACA-TG--G-AACAGCAAAACAACTTCGCAGTGCAAGAAATAGTTCT 2168
Query 2318 GACAAGAATGAAAGTAAGGTGGGTCGTCCACCCACTAGGAAACTATCTGATCGTAAGGCC 2377
||||||| |||||| | || ||||||||||||||||||||||| ||||| || |||||
Sbjct 2169 GACAAGAGTGAAAGCAGGGCAGGTCGTCCACCCACTAGGAAACTCTCTGACCGCAAGGCT 2228
Query 2378 TACAAACGTCAGAGAGCTACGGCAACAAATGCTCCAACACTAGATTTTCATGTTGGTTCA 2437
||||||||||||| | ||| || ||||||||| ||||||||||||||| | | | |
Sbjct 2229 TACAAACGTCAGAAAAATACAGCGACAAATGCTACAACACTAGATTTTC-T-T-G----A 2281
Query 2438 AATGATGGTCGTGAGGAGCTACTGGCAGCTGTCAACTCAGCTATAAA-TATTGCTCAGAA 2496
|||||| | ||| |||||||| || ||||| ||||| |||||||| | ||||||||||
Sbjct 2282 --TGATGGGCATGAAGAGCTACTAGCTGCTGTTAACTCGGCTATAAACT-TTGCTCAGAA 2338
Query 2497 TTTTCCCAACTCTTTCTGGAAGCAAATGGAGCGCTACTTCGGCTATATATCTGATG-ATC 2555
|||||| | ||| |||||||||||||||||||||||||| ||| ||||||||||| | |
Sbjct 2339 TTTTCCTAGCTCGTTCTGGAAGCAAATGGAGCGCTACTTTTGCTTTATATCTGATGCA-C 2397
Query 2556 ATATCAATTTCTTGAAACAACAGGGAGAACTCTCCTCCATGGGTCCG-ACGCCCGTTTTG 2614
||||||| ||| ||||||| |||||||||||||||||||||||| | || || | | |
Sbjct 2398 ATATCAACTTCGTGAAACAGCAGGGAGAACTCTCCTCCATGGGTA-GTACACCTGGTGGG 2456
Query 2615 ACATCTTCTGAGTTTGATAGCCCTG---TGTTTCCTGAGGAACTTGCAACTAGCAGGGCG 2671
|||||||| || |||||||| | || | ||||| ||||||||||||| ||||| | |
Sbjct 2457 ACATCTTCAGACTTTGATAGTCATGAAATATTTCCCGAGGAACTTGCAAGTAGCAAAGTG 2516
Query 2672 GATTCCAAGGCTTCTCCACTGTACCAGAGATTGCTATCAGC-CTTGATATCTGAGGACTC 2730
||||| || ||| | || || || ||||||||||||||||| || || || ||||||||
Sbjct 2517 GATTCTAAAGCTGCGCCTCTTTATCAGAGATTGCTATCAGCTCTA-ATTTCAGAGGACTC 2575
Query 2731 AATGGGTGTAAATGAAGATTTACAAGTTGATC--TT-G-A-C-GATG---ACTCAGAATT 2781
|| |||| ||||||||||||||| ||||| || | | | |||| | ||||||||
Sbjct 2576 AACCAGTGTGAATGAAGATTTACAATTTGATGGATTTGGAGCCGATGTTGAGTCAGAATT 2635
Query 2782 CAGTGTTCTGAATAATATGG---AGTTCAATGGGTTTAGGAACAATGAAAGGCTGGAACT 2838
||||||| ||||| |||||| |||||||||| | ||||| ||| || |||||| |
Sbjct 2636 CAGTGTTTTGAATCATATGGTGGAGTTCAATGGCTATAGGAG---TGATAGACTGGAATT 2692
Query 2839 TGATGAA-TCAGAAAATGATGGGTCTGCAATTTTGTTCAAGGGTGTTGATAAG-TCAGCC 2896
|||||| | |||| |||||| ||||| || | ||||||||||| ||| | ||||||
Sbjct 2693 TGATGAGCT-AGAAGATGATGTGTCTGTTATCCCGCTCAAGGGTGTTAATA-GCTCAGCC 2750
Query 2897 CACCACTG-CAATGGCAA-ATTTCCAGATAAT-TCACCCATTGACTTCGT-AGATATTCA 2952
||||| || |||||| || |||| ||||| || | | |||| |||||| | ||| |||||
Sbjct 2751 CACCA-TGTCAATGG-AAGATTTTCAGATCATAT-ATCCATCGACTTC-TCAGACATTCA 2806
Query 2953 ATATGATAAATT-GGGGATAGATGAAAAGATTTATCTGGAAGCCCAGTCTCTTGGAATAT 3011
||||| || || |||||||||||| ||||||||| ||||||| || ||| ||||||| |
Sbjct 2807 GTATGA-AACTTTGGGGATAGATGAGAAGATTTATATGGAAGCTCAATCTATTGGAATCT 2865
Query 3012 CCATAGA-CCTAATGCCTAGTATCTCAAACGTGGAGGATGAAGGTATTGCTGAC-GAAAT 3069
| | || || | |||||||||| ||||||||||| |||||||| |||| || | || ||
Sbjct 2866 GCTTGGAACCCA-TGCCTAGTATTTCAAACGTGGAAGATGAAGGAATTGTTG-CTGACAT 2923
Query 3070 TAAAAAGTTGGAGGAGGCTATCTGCAACGAGGGTTCTAAGAAGAAAGAGATTGTGGA-TA 3128
|||| ||| ||||||||||| || | | |||||| |||||||||||||| || || ||
Sbjct 2924 CAAAACGTTAGAGGAGGCTATTTGTGAGGTGGGTTCCAAGAAGAAAGAGAT-GTTGAATA 2982
Query 3129 GGCTACTAAAGCCTGCCATCGAGATGAAAGAACTTCAGGAGAAGGAGCTTGA-TCAACTT 3187
||||||||||||||||| | || |||||||||| ||||||||||||| |||| | ||
Sbjct 2983 GGCTACTAAAGCCTGCCCTAGAAATGAAAGAACGTCAGGAGAAGGAGTTTGAGTGG-CTC 3041
Query 3188 GGTTATGAAAAGCTCATCGAGATGGCATATGAAAAAAGCAAGGCAAGTCGGCGTCATCAC 3247
||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 3042 GGTTATGAAAAACTCATCGAAATGGCATATGAAAAGAGCAAGGCAAGTCGGCGTCATCAC 3101
Query 3248 AAC-GCTGGTGGAAAGAATTCCAAC-AACAAGATTTCAAAGCAGGCTGCATTGGCTTTTG 3305
| || ||||||||| ||| | |||||||| ||||||||||| ||||| |||||||
Sbjct 3102 T-CTGCAAGTGGAAAGAGTTCGG-CTAACAAGATATCAAAGCAGGCCGCATTTGCTTTTG 3159
Query 3306 TTAGAAGGACGCTTGAACGATGCCATCAATTCGAA-AAGACGGGCAAAAGCTGCTTTAGT 3364
| | ||||||||||||| |||| | |||||||||| || || |||||||| |||||||||
Sbjct 3160 TGAAAAGGACGCTTGAAAGATGTCGTCAATTCGAAGAA-ACAGGCAAAAGTTGCTTTAGT 3218
Query 3365 GAG-CCTGAAATT-AAGGATATGTTCATTGCGGGGTTGGCAACAGCT-GAAGATACTCTC 3421
||| || | ||| ||| |||| ||||||| |||||| || || | ||||||| || |
Sbjct 3219 GAGTCC--ACATTTAAGAATATCATCATTGCCGGGTTGACA-CAAATTGAAGATAATCCC 3275
Query 3422 ATGGACAAGGA-GT-ATAATACGTCAACTTCAACGCCCATGGGCTCACAGCCAAGCTCTT 3479
| ||||||||| | || || ||| ||||||| |||||||| ||||| || ||||| |
Sbjct 3276 ACGGACAAGGAAGACATTCTA--TCAGCTTCAACACCCATGGGATCACAACCGAGCTCAT 3333
Query 3480 CGCTGGCACT-C-ATTGGG-CAGAACTCGGAGAA-CTATGCCAAATCTTCTGATGTTCTA 3535
| ||||| | | | || |||| | |||| || | ||||||| | | || | ||
Sbjct 3334 CATTGGCATTGCCAATGACACAGAGCACGGAAAATC-ATGCCAA-T-T-CT--T---CT- 3383
Query 3536 CCATCTGAAAATGCTTTACTAGAA--CAAACGACGGGGAAAGAAGATACAGCATGGTCCA 3593
||||||||||||| ||| |||| || | ||| ||| | ||||| |
Sbjct 3384 ------GAAAATGCTTTACGGGAAGGCAAA-GATG---AAAC--GAT---G--TGGTCAA 3426
Query 3594 ATAGGGTCAAGAAGAGAGAGTTGCTGCTCGATGATGTTGGTATTGGGACACAACTCTCAA 3653
|||| | ||||||||||| |||||||| |||||||| ||| ||| ||| ||| ||||
Sbjct 3427 ATAGAATGAAGAAGAGAGAATTGCTGCTTGATGATGTGGGTG--GGG-CACCACTTTCAA 3483
Query 3654 GTAATAC-AAAGGGGAAGAGAAGCGACAGGGACAGAGATGGGAAAGGGCAGGCTTCATC- 3711
| | ||| ||||| |||||||| || |||||||||||||| ||||| |||||||| ||
Sbjct 3484 GCAGTACGAAAGGA-AAGAGAAGTGAGAGGGACAGAGATGGAAAAGGACAGGCTTCTTCG 3542
Query 3712 T-A-GAGGCGGA---ACTAATAAGATCGGCCGGCCTTCCCT-GTCCAATGCTAAGGGTGA 3765
| | |||||||| ||||| |||||||| |||||| | || || ||||| ||||||||
Sbjct 3543 TCAAGAGGCGGAGGCACTAACAAGATCGGTCGGCCTGCGCTTGTA-AATGCCAAGGGTGA 3601
Query 3766 AAGAAAAACAAAAGCAAAACCGAAGCAGAAAACAACTCAGATATCT-C--CATCTG-TTA 3821
| | ||| ||||| ||||||||| |||||||||||||| ||| | | | | ||| ||
Sbjct 3602 ACGGAAATCAAAAACAAAACCGAGGCAGAAAACAACTCCGATGTTTTCTTCTTCTTCTTC 3661
Query 3822 GGG---T-TCC-GGAGCAACCCA-AACCATCGTTA-CCAAAACCGAA-TGA-AGCAA-A- 3870
| | || ||||||| ||| ||| ||| || ||||||| || | | ||||| |
Sbjct 3662 TGTCAATATCTTGGAGCAAACCAGAAC-ATCATTGTCCAAAAC--AACTAACAGCAACAA 3718
Query 3871 CAGCGAGTATAATAACTTGGAGGCACTGGAGGAGACAGAGCCAATTCTCGATTTATCTCA 3930
||||||||||| |||||||||| ||||||| ||| ||||||| | || || |||||||
Sbjct 3719 CAGCGAGTATAGTAACTTGGAGACACTGGATGAGTCAGAGCC--T-CTTGACCTATCTCA 3775
Query 3931 GTTACAAATACCAGATGGCTTAGG------AGAT--TTT-GATGCGCAACCAGGTGATAT 3981
| || |||||||| || ||||| |||| ||| ||| | ||| |||| ||| |
Sbjct 3776 CCTGCAGATACCAGACGGTTTAGGTGGTCCAGATGATTTCGATACACAAGCAGGAGATCT 3835
Query 3982 TAAT-TCATGGTTTAACATGGACGACGAAG-A--A---GATT-TCGAT-ATGAC---GGA 4029
|| |||||||| ||||| || ||||| | | | ||| | ||| || | |||
Sbjct 3836 -AAGCTCATGGTTGAACATCGATGACGATGCATTACCAGATACT-GATGATCTCCTTGGA 3893
Query 4030 GCTTGGAATACCAACGGATGATATCTCAGAGCTGAA-CATAAAGTTATGAGGTCACCACT 4088
||| |||||| | ||||||| | ||||| || || ||| | | ||| || || |
Sbjct 3894 -CTTCAAATACCCATGGATGATCTTTCAGA-CTTAAACATGATGGTATAAGCTCT----T 3947
Query 4089 CCATCTCACTCTATCTATATCTGTATAGTCTTGTTGGTTATACTAGTT-GACAAAAAGAG 4147
|||| ||| | ||| |||||||||||| ||| ||||||| | || | | | | ||
Sbjct 3948 ---TCTC--TCT-T-TATTTCTGTATAGTCTCGTTTGTTATACCA-TTAG-CGATGA-AG 3997
Query 4148 AGTAAGGGAAAAGAAAAGTTTTGCTTC-CTTGGGCGAATAACCAAT-AC-AGGAAATGGG 4204
| ||| ||| | || |||||| | | || | ||||||||| | || || || | ||
Sbjct 3998 A--AAGATAAAGGCAA-GTTTTGGTCCACT-GAAAGAATAACCAGTCACCAG-AA-TCGG 4051
Query 4205 TTATTCGGATGTTAGCTCCAGAAAATTAGGTC-ATATAGAttctt-ttctacatcttctt 4262
|||||||| ||| ||||||| || |||| | ||||||||||| || || |||||||
Sbjct 4052 TTATTCGG--GTTGGCTCCAGCAACCTAGGGCGATATAGATTCTGATTATATTTCTTCTT 4109
Query 4263 cttcttcttcttcttaggcttcttt-tttcgtcttt-ttATA-ACTCCGATTTCTTGGGT 4319
|||| || |||| ||||| |||||| |||| ||||| ||||| | | |||| | |||||
Sbjct 4110 CTTCATCATCTT-TTAGGGTTCTTTATTTC-TCTTTCTTATATAGTTGGATTACGTGGGT 4167
Query 4320 G 4320
|
Sbjct 4168 G 4168
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 166958572751
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5