BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G19910.1 Length=2979 Score E Sequences producing significant alignments: (Bits) Value Ahg480480 jgi|Araly1|480480|fgenesh2_kg.3__3181__AT2G19930.1 2158 0.0 Ahg931400 jgi|Araly1|931400|scaffold_303857.1 1615 0.0 Ahg319567 jgi|Araly1|319567|fgenesh1_pm.C_scaffold_3002583 1365 0.0 > Ahg480480 jgi|Araly1|480480|fgenesh2_kg.3__3181__AT2G19930.1 Length=3107 Score = 2158 bits (1168), Expect = 0.0 Identities = 2221/2712 (82%), Gaps = 141/2712 (5%) Strand=Plus/Plus Query 322 TGCAGGGCTTC-TCAAG-A-TG-TGTCTCTTGATT-TGGAAACTCCCTCTCCTAAGTTC- 375 ||||||| ||| ||||| | | ||||| |||||| | || |||| ||||||||| || Sbjct 322 TGCAGGG-TTCTTCAAGAAGAGATGTCTGTTGATTCT-GATGCTCCTTCTCCTAAG-TCT 378 Query 376 ATGAAAAGAGAAGAAAATGGTGGATCTAAGTACATTCCTCCGCTTTTAGCTTTGGGTGAA 435 ||||||| ||||||||||| |||||| | ||||||| | ||| |||||||||||||| Sbjct 379 TTGAAAAGTGAAGAAAATGGAGGATCTCTGCACATTCCACAGCTGGTAGCTTTGGGTGAA 438 Query 436 CTTGAATTCAAGAAGGCGTTTCTGTTGCTTAGCTATATTGGAGGGGAATC-CCTTGTTGA 494 |||||||| |||||||||||| |||| |||||||||||| |||| || | | || | Sbjct 439 CTTGAATTTAAGAAGGCGTTTTTGTTACTTAGCTATATTCCAGGGCAA-CAAC-TG--G- 493 Query 495 G-GAGGTTATATCTGGTGATCAGA-TCAGAAAATGGAAGGATTTGCCAATGGTTTCATAT 552 | |||||| | ||| |||| ||| || || |||||| ||||||||||||||| ||||| Sbjct 494 GCCAGGTTACAACTGCTGATGAGATTC-GACTATGGAAAGATTTGCCAATGGTTGCATAT 552 Query 553 GAAGCAGCGGTTTGGAACCGGTTGGGACAGCGTTATTGTTCCCCCA-A-GGAGCGAAGAA 610 |||||||| |||||| |||| ||||| | || |||||| | || || | || ||||| | Sbjct 553 GAAGCAGCCGTTTGGGACCGTTTGGGCCGGCATTATTG-T-CCTCAGACAGACCGAAG-A 609 Query 611 GGCCACTTG-AAGGGGATAGTGGGATGACCCATTACTATCAATGTCATGTTGCTACCGAT 669 | ||| || |||||||||| | ||||||||||||||| |||||||||||| ||||| Sbjct 610 -G--TGTTGCAATGGGATAGTGGCAAGACCCATTACTATCAGTGTCATGTTGCTCCCGAT 666 Query 670 GGTAGTTACAAATTCAAGGGTCATCTTCTGGAGA-ACACTGGAACACACCTGCACAAGGT 728 ||||| |||| ||||||||| | ||||| || | |||||||||||||| |||||||||| Sbjct 667 GGTAGCTACACATTCAAGGGCCCCCTTCTTGA-ACACACTGGAACACACTTGCACAAGGT 725 Query 729 TTTGGGTGATGATAACGTTCTAACTGTCAAATTTGATAAAGT---GTTAGGCGTGGA--A 783 ||||||||||| || ||| ||||||||||||| | | || | | | | | | Sbjct 726 CTTGGGTGATGAAAATGTTTTAACTGTCAAATTCGCGGATGTCCCGAAAAAC-T-CATCA 783 Query 784 ACCTATTGTAATGACCTTTACTCTACATACAAAGGGATTGCTAAGAATGGTATCATGGTT 843 || ||| | ||||||| ||| | ||||||||||| ||||| ||||| ||||||||| || Sbjct 784 ACATATAGCAATGACCGTTATTTTACATACAAAGAAATTGCCAAGAACGGTATCATGATT 843 Query 844 GGGTTACGCCGTTATCGA-TTTTTTGTTTTCAAAGATGGAGGGAAAGAAGAGAAGAAGAA 902 || ||||| ||||||| | ||||||||||||||||||||||| ||||| || |||||||| Sbjct 844 GGTTTACGTCGTTATC-AGTTTTTTGTTTTCAAAGATGGAGGAAAAGAGGAAAAGAAGAA 902 Query 903 AGATGTTTCTACAAAGGGAGTTAAATGCTACTTTATACGCACAGACTCGACAGCTTCAAT 962 |||| ||||||||||| ||| |||||||||||||||||||| | ||| |||||||| | Sbjct 903 AGATCTTTCTACAAAGAAAGTGAAATGCTACTTTATACGCACGGGCTCTACAGCTTC-TT 961 Query 963 -TGATATGCAAAATCCCTATATCTTCGCCGGAAAGTCAATGCATGAAGCACGTATGCATT 1021 ||||||| ||||||||||||| || | ||||||||||| || ||||| |||||||||| Sbjct 962 GTGATATGGAAAATCCCTATATTTTTACTGGAAAGTCAATTCACGAAGCTCGTATGCATT 1021 Query 1022 TTATGCATGTGAATACTTTG--TCATCTTTGCCCAACTATATGTCAAGGTTTTCTTTAAT 1079 ||||||| ||| || | | || ||||| | || |||||| |||||||||| ||||| Sbjct 1022 TTATGCACGTGCAT-C-GAGCACCAACTTTGGCGAATTATATGGCAAGGTTTTCCTTAAT 1079 Query 1080 TCTGTCAAAGACTAAAACGCTCGAAGTTGACATGACTGGAATTACCTTTGAGCAAATCGA 1139 ||| ||||||||||||||||| ||||||||||||||||| ||||||||||| | ||| || Sbjct 1080 TCTCTCAAAGACTAAAACGCTTGAAGTTGACATGACTGGGATTACCTTTGATCCAATTGA 1139 Query 1140 TGATATACACTGCCATGATCAAGATGATAAGGATGTTCTTGACAAGAATGGGAAACCTTG 1199 |||||||||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct 1140 TGATATACACTGCCATGATCAAGATGGGAAAGATGTTCTTGACAAGAACAAAAAACCTTG 1199 Query 1200 TATACATTCAGATGGAACTGGCTACATCTCTGAGGACCTTGCTCGGATGTGTCCAGTTAA 1259 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 1200 TATACATTCAGATGGAACTGGCTACATCTCTGAGGACCTTGCTCGGATGTGTCCCCTAAA 1259 Query 1260 TATTTTTAAAGGGAAATCTATGAGAAGTAACAATATTCAGAGTAAGAATTTAAATTTTGA 1319 ||| ||||||||| || || || | || || ||| | |||| || Sbjct 1260 TATATTTAAAGGG-AA---AT-----GT--C-----TC--AG-AAG--TGAAAATATT-C 1297 Query 1320 AGGACAGGGACCATGTGGCCAAGAGCCGCCTCTGCTGATCCAGTTTCGGATTTTTTATAA 1379 |||| | | | ||| |||||| |||||||| |||||||||||||||| |||||| | Sbjct 1298 AGGA-A--G--CTTGTAACCAAGACCCGCCTCTTTTGATCCAGTTTCGGATGTTTTATGA 1352 Query 1380 TGGCTATGCTGTTAAGGGAACTTTTCTCACAAACAAGAAACTTCCTCCTCGGACTGTCCA 1439 |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1353 TGGCTATGCTGTTAAGGGAACTTTTCTCTTAAACAAGAAACTTTGTCCTCGGACTGTCCA 1412 Query 1440 GGTTCGACCTTCTATGATCAAGGTGTATGAAGATCGAACCTTGTCAAATCTTAGTACCTT 1499 |||||||||||| ||||||||||||| | |||||| | ||||||||| |||| ||||| Sbjct 1413 GGTTCGACCTTCGATGATCAAGGTGTCTAAAGATCCCTCATTGTCAAATTTTAGCACCTT 1472 Query 1500 TAACTCCTTGGAGGTAGTCACTACAAGTAATCCACCAAGAAAG-GCGAGGCTATCAAGAA 1558 |||| | ||||||||||| |||||||||||||||||||| ||| | | |||||||| || Sbjct 1473 TAACGCTTTGGAGGTAGTAACTACAAGTAATCCACCAAG-AAGAACAAAGCTATCAAAAA 1531 Query 1559 ATTTGGTGGCGCTACTTAGTTATGGAGGAGTCCCTAATGACTTCTTTTTGAATATATTGC 1618 ||||||| ||||| ||||| ||||||||| |||||||||| ||||||||| ||||||||| Sbjct 1532 ATTTGGTTGCGCTGCTTAGCTATGGAGGAATCCCTAATGAATTCTTTTTGGATATATTGC 1591 Query 1619 GCAACACGCTGGAAGAGTCCAAAACCATATTCTACAGTGAACGTGCTGCGTTTAAAGCTG 1678 |||||||||||||||||| |||| ||||||||||| ||| ||||||| |||| | || Sbjct 1592 TCAACACGCTGGAAGAGTCTAAAAGCATATTCTACAACAAACATGCTGCGCTTAATGTTG 1651 Query 1679 C-CATTAATTAT--GG----GGACGACCAGTACACTGCAGATATGATCTTGGTTGGTATC 1731 | | |||||||| || |||||||||| || | ||| | ||||| |||||||||||| Sbjct 1652 CTC-TTAATTATGGGGAAATGGACGACCAGAACGCCGCACAGATGATATTGGTTGGTATC 1710 Query 1732 CCTCTTGATGAACCATACTTGAAGGATCGTCTTTCTTA-TC-TCTTAAAGACAGAGAGGA 1789 || ||||| |||||| |||||||| ||| ||| || || || || |||||||||||| | Sbjct 1711 CCCCTTGACGAACCACACTTGAAGAATCATCTGTC-TATTCTTC-TAAAGACAGAGAAAA 1768 Query 1790 ATGCTCTCAAAGCAGGAAGGTTTCCTATTGA-CGAATCATACTATATCATGGGCACAGTG 1848 ||| ||||||||||||||| ||||| ||| ||||||||||||| ||||||| |||||| Sbjct 1769 ATGATCTCAAAGCAGGAAGACTTCCT-GTGACCGAATCATACTATCTCATGGGGACAGTG 1827 Query 1849 GATCCCACCGGGGAGCTTAAGGAAAATGAAATCTGTGTCATCCTCCATTCTGGCCAAATT 1908 |||||||| || ||||| |||||| ||||| ||||||| ||||| | ||||| |||||| Sbjct 1828 GATCCCACTGGAGAGCTAAAGGAAGATGAAGTCTGTGTAATCCTTGAGTCTGGGCAAATT 1887 Query 1909 TCCGGG-GATGTGTTAGTTTACAGAAATCCTGGATTACATTTTGGAGACATACATGTACT 1967 | |||| || ||||||||||| ||||||||||||||||||||||||||||||||| | || Sbjct 1888 T-CGGGAGAAGTGTTAGTTTATAGAAATCCTGGATTACATTTTGGAGACATACATATTCT 1946 Query 1968 TAAGGCTACCTATGTTAAGGCCTTAGAAGACTATGTTGGAAATGCCAAGTTTGCTGTGTT 2027 |||||||| |||||||||||||| ||||| |||||||||||| |||||| ||||||||| Sbjct 1947 CAAGGCTACATATGTTAAGGCCTTGGAAGAGTATGTTGGAAATTCCAAGTATGCTGTGTT 2006 Query 2028 CTTCCCTCAGAAAGGTCCAAGATCCTTGGGCGATGAGATTGCTGGTGGTGACTTTGATGG 2087 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 2007 CTTCCCTCAGAAAGGTCCAAGATCCTTGGGCGACGAGATTGCAGGTGGTGACTTTGATGG 2066 Query 2088 CGATATGTATTTCATATCCAGAAATCCCA-AGCTACTGGAACACTTCAAGCCAAGTGAAC 2146 ||||||||||||||||| ||||| ||| |||| || ||||||||||| |||||||||| Sbjct 2067 TGATATGTATTTCATATCAAGAAA-CCCTGAGCTGCTTGAACACTTCAAACCAAGTGAAC 2125 Query 2147 CATGGGTGAGTTCTT-CTAAACCTAGTAAAATTTACTGTGGAAGAAAGCCAAGTGAACTA 2205 | |||||||||| | || || ||||||| | ||| ||| ||| |||||| | || Sbjct 2126 CGTGGGTGAGTT-TGACTCCTCCCAGTAAAAGTAACTCTGGTAGAGCGCCAAGCCAGCTT 2184 Query 2206 TCAGAAGAAGAGTTGGAAGAAGAGCTATTCAAAATGTTCTTAAAAGCAAGATTT--TGTA 2263 ||| |||||||||||||||||| || ||| |||||||| | || ||| ||||| || Sbjct 2185 TCACCAGAAGAGTTGGAAGAAGAACTTTTCGAAATGTTCCTGAAGGCAGGATTTCATGCC 2244 Query 2264 AGAGAGACGTTATAGGGATGGCTGCAGATTGCTGGCTAGGAATAATGGACC-CTTTCCTC 2322 || | | ||||||||||| ||||||||| ||||| || ||||||||||| ||| ||| Sbjct 2245 AGC-A-ATGTTATAGGGATAGCTGCAGATAGCTGGTTAACAATAATGGACCGCTT-CCTA 2301 Query 2323 AC-CTTAGGAGATGAGAGTGCTAAGGAAAAATATGAAAGGAAGAAGAATATTCTTAAGTT 2381 | || |||||||||||| ||| |||||||| ||||| ||||||||| || || ||| | Sbjct 2302 ATACT-AGGAGATGAGAGAGCTGAGGAAAAAGCTGAAATGAAGAAGAAAATGCTAAAGCT 2360 Query 2382 GATTGATATATACTATGATGCTCTTGATGCACCAAA-AAAGGGGGCTAAGGT-TGATCTC 2439 |||||||||||||||||||||||||||||||||||| ||||||| |||||| | |||| Sbjct 2361 GATTGATATATACTATGATGCTCTTGATGCACCAAAGAAAGGGGA-TAAGGTCT-ATCTT 2418 Query 2440 CCGCCCGATCTAGAGATCAAAAAT-TTTCCACATTACATGGAGCGTGACCCTAAGAGAGA 2498 || ||| || ||| | | || |||||||||||||||||||| || || | || Sbjct 2419 CCAAACGAGCT-GAGGCCCGACATCTTTCCACATTACATGGAGCGGGAGA--AA-A-AG- 2472 Query 2499 TTTCAGGTCCACTTCTATTCTTGGATTAATCTTTGACACTGTGGATTCTCATA-ATGCAG 2557 || || |||||||||||||||||||||||||| |||| ||| | || || | | ||| Sbjct 2473 TT-CAAGTCCACTTCTATTCTTGGATTAATCTATGACTTTGTTAAATCACAGACAA-CAG 2530 Query 2558 AGGAACCCCCACCATC-T--GAAATCAGTAAACTCTGGTATTTTGAAGATGAACCGGTCC 2614 |||||||| ||||||| | || |||||||||||| | ||| |||||||| |||||| Sbjct 2531 AGGAACCCACACCATCATCTGAGATCAGTAAACTCCCCTGTTTCGAAGATGAGCCGGTCT 2590 Query 2615 CTA-AGTCTCACATGGATAAATTTACATCC-TGGTACGAGAATTACCGAAGTGAAATGTC 2672 | | ||| ||| ||||| |||| || | | ||||| || |||||| ||| ||| ||| | Sbjct 2591 C-AGAGTTTCATATGGAGAAATGTAGA-CGGTGGTATGATAATTACAGAACTGAGATGAC 2648 Query 2673 CCAAGCGATGATGGAAACTGATAAGGTTAAGAGGAATCAATTAACCAATGAAGTTATCCA 2732 ||| ||||||| |||||||||||| | || | ||| ||||||||||||| || Sbjct 2649 CCAGGCGATGA---AAACTGATAAGGAT--GA--A-TCAG----CCAATGAAGTTATTCA 2696 Query 2733 GAGGTACAAGCAGGATTTCTATGGCGCTGCAGGGTTTGAAGACAGCAATAAAAGTCTGGA 2792 ||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 2697 GAGATACAAGCAGGAGTTCTATGGTGCTGCAGGGTTTGAAGACAGCAAGAAAAGTCTGGA 2756 Query 2793 AGAACTCTACCCCCAAGCCTTGGCACTCTACAACG-TCGTTTACGATTATGCCATTCAGG 2851 ||||||||| || |||||| | ||||| ||||| | |||||||||||||||||||||| | Sbjct 2757 AGAACTCTATCCGCAAGCCCTCGCACTGTACAA-GATCGTTTACGATTATGCCATTCATG 2815 Query 2852 AAGGTGTTGCGAAATGTACATTTGCCTGGAATGTTGCAGGACCGGTCCTGTGCAAATTTT 2911 ||||||| |||||||| |||| |||||| || ||||||||||| ||||||| ||| | Sbjct 2816 CAGGTGTTTCGAAATGTGGGTTTGTCTGGAAGGTAGCAGGACCGGTACTGTGCAGATTCT 2875 Query 2912 ACCT--T-AAGAAAACGAAGGATAAATCAGTAGTG-GCTTCAACGTCTGTGCTTAAAAAG 2967 | || | ||||||| | |||| ||||| ||||| | | || | |||||||||||| || Sbjct 2876 ATCTAATGAAGAAAATGCAGGAGAAATCTTTAGTGTG-TGCACCATCTGTGCTTAAAGAG 2934 Query 2968 CTTTTGGGTTGA 2979 |||| ||||||| Sbjct 2935 CTTTGGGGTTGA 2946 > Ahg931400 jgi|Araly1|931400|scaffold_303857.1 Length=2845 Score = 1615 bits (874), Expect = 0.0 Identities = 998/1059 (94%), Gaps = 4/1059 (0%) Strand=Plus/Plus Query 1923 AGTTTACAGAAATCCTGGATTACATTTTGGAGACATACATGTACTTAAGGCTACCTATGT 1982 ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||| Sbjct 1769 AGTTTACAGGAATCCTGGATTACATTTTGGAGATATACATGTGCTTAAGGCTACATATGT 1828 Query 1983 TAAGGCCTTAGAAGACTATGTTGGAAATGCCAAGTTTGCTGTGTTCTTCCCTCAGAAAGG 2042 ||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| Sbjct 1829 TAAGGCCTTAGAAGACTATGTCGGAAATTCCAAGTATGCTGTGTTCTTCCCTCAGAAAGG 1888 Query 2043 TCCAAGATCCTTGGGCGATGAGATTGCTGGTGGTGACTTTGATGGCGATATGTATTTCAT 2102 ||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1889 TCCGAGATCCTTGGGTGATGAGATTGCAGGTGGTGACTTTGATGGCGATATGTATTTCAT 1948 Query 2103 ATCCAGAAATCCCAAGCTACTGGAACACTTCAAGCCAAGTGAACCATGGGTGAGTTCTTC 2162 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1949 ATCCAGAAATCCCAAGCTACTGGAATACTTCAAGCCAAGTGAACCATGGGTGAGTTCTTC 2008 Query 2163 TAAACCTAGTAAAATTTACTGTGGAAGAAAGCCAAGTGAACTATCAGAAGAAGAGTTGGA 2222 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2009 TAAACCTAGTAAAATTTACTCTGGAAGAAAGCCAAGTGAACTATCAGAAGAAGAGTTGGA 2068 Query 2223 AGAAGAGCTATTCAAAATGTTCTTAAAAGCAAGATTTTGTAAGAGAGACGTTATAGGGAT 2282 ||||||||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct 2069 AGAAGAGCTTTTCAAAATGTTCTTAAATGCAAGATTTCGTCCGAGCGACGTTATAGGGAT 2128 Query 2283 GGCTGCAGATTGCTGGCTAGGAATAATGGACCCTTTCCTCACCTTAGGAGATGAGAGTGC 2342 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 2129 GGCTGCAGATTGCTGGCTAGGAATAATGGACCCTCTCCTCACCTTAGGAGCTGAGAGTGC 2188 Query 2343 TAAGGAAAAATATGAAAGGAAGAAGAATATTCTTAAGTTGATTGATATATACTATGATGC 2402 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 2189 GAAGGAAAAATATGAAAGGAACAAGAATATTCTTAAGTTGATTGATATATATTATGATGC 2248 Query 2403 TCTTGATGCACCAAAAAAGGGGGCTAAGGTTGATCTCCCGCCCGATCTAGAGATCAAAAA 2462 |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| Sbjct 2249 TCTTGATGCACCAAAAAAGGGGGCTAAGGTCGATCTCCCACCCGACCTAGAGATCAAAAA 2308 Query 2463 TTTTCCACATTACATGGAGCGTGACCCTAAGAGAGATTTCAGGTCCACTTCTATTCTTGG 2522 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2309 TTTTCCACATTACATGGAGCGTGACCCTAAGAGAGATTTCAGGTCGACTTCTATTCTTGG 2368 Query 2523 ATTAATCTTTGACACTGTGGATTCTCATAATGCAGAGGAACCCCCACCATCTGAAATCAG 2582 |||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct 2369 ATTAATCTTTGACACTGTAGATTCCCAGAATGCAGAGGAACCCCCACCATCTGAAATCAG 2428 Query 2583 TAAACTCTGGTATTTTGAAGATGAACCGGTCCCTAAGTCTCACATGGATAAATTTACATC 2642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2429 TAAACTCTGGTATTTTGAAGATGAACCGGTCCCTAAGTCTCACATGGATAAATTTACATC 2488 Query 2643 CTGGTACGAGAATTACCGAAG-TGAAATGTCCCAAGCGATG-ATGGAAACTGATAAGGTT 2700 |||||||||||||||| || | ||||||||||||||||||| | |||||||||||||||| Sbjct 2489 CTGGTACGAGAATTACAGA-GCTGAAATGTCCCAAGCGATGGA-GGAAACTGATAAGGTT 2546 Query 2701 AAGAGGAATCAATTAACCAATGAAGTTATCCAGAGGTACAAGCAGGATTTCTATGGCGCT 2760 |||| ||| |||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2547 AAGAAGAAGCAATTAGCCAATGAAGTTATCCAGAGATACAAGCAGGATTTCTATGGCGCT 2606 Query 2761 GCAGGGTTTGAAGACAGCAATAAAAGTCTGGAAGAACTCTACCCCCAAGCCTTGGCACTC 2820 ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2607 GCAAGGTTTGAAGACAGCAACAAAAGTCTGGAAGAACTCTACCCCCAAGCCTTGGCACTC 2666 Query 2821 TACAACGTCGTTTACGATTATGCCATTCAGGAAGGTGTTGCGAAATGTACATTTGCCTGG 2880 |||||| ||||||| |||| |||| ||| ||||||||| ||||||| | |||| |||| Sbjct 2667 TACAACATCGTTTATGATTTTGCCTTTCCCGAAGGTGTTTCGAAATGCGCGTTTGTCTGG 2726 Query 2881 AATGTTGCAGGACCGGTCCTGTGCAAATTTTACCTTAAGAAAACGAAGGATAAATCAGTA 2940 || ||||||||||||||||| |||| ||||||||||||||||||| |||| |||| |||| Sbjct 2727 AAGGTTGCAGGACCGGTCCTATGCAGATTTTACCTTAAGAAAACGCAGGAGAAATTAGTA 2786 Query 2941 GTGGCTTCAACGTCTGTGCTTAAAAAGCTTTTGGGTTGA 2979 ||||||||||| ||||||||||||||| ||| ||||||| Sbjct 2787 GTGGCTTCAACCTCTGTGCTTAAAAAGATTTGGGGTTGA 2825 Score = 1288 bits (697), Expect = 0.0 Identities = 772/809 (95%), Gaps = 2/809 (0%) Strand=Plus/Plus Query 868 GTTTTCAAAGATGGAGGGAAAGAAGAGAAGAAGAAAGATGTTTCTACAAAGGGAGTTAAA 927 |||||||||||||||||||||||||||||||||||||| | | ||||||||||||| ||| Sbjct 963 GTTTTCAAAGATGGAGGGAAAGAAGAGAAGAAGAAAGACGCTGCTACAAAGGGAGTGAAA 1022 Query 928 TGCTACTTTATACGCACAGACTCGACAGCTTCAATTGATATGCAAAATCCCTATATCTTC 987 |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| Sbjct 1023 TGCTACTTTATACGCACAGACTCGACAGCTTCAAATGATATGCGAAACCCCTATATCTTC 1082 Query 988 GCCGGAAAGTCAATGCATGAAGCACGTATGCATTTTATGCATGTGAATACTTTGTCATCT 1047 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1083 TCCGGAAAGTCAATGCATGAAGCGCGTATGCATTTTATGCATGTGAATACTTTGTCATCT 1142 Query 1048 TTGCCCAACTATATGTCAAGGTTTTCTTTAATTCTGTCAAAGACTAAAACGCTCGAAGTT 1107 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1143 TTGCCCAACTATATGGCAAGGTTTTCTTTAATTCTGTCAAAGACTAAAACGCTCGAAGTT 1202 Query 1108 GACATGACTGGAATTACCTTTGAGCAAATCGATGATATACACTGCCATGATCAAGATGAT 1167 ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||| || Sbjct 1203 GACATGACTGGGATTACCTTCGAGCAAATTGATGATATACACTGCCATGATCAAGATAAT 1262 Query 1168 AAGGATGTTCTTGACAAGAATGGGAAACCTTGTATACATTCAGATGGAACTGGCTACATC 1227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1263 AAGGATGTTCTTGACAAGAATGGGAAACCTTGTATACATTCAGATGGAACTGGCTACATC 1322 Query 1228 TCTGAGGACCTTGCTCGGATGTGTCCAGTTAATATTTTTAAAGGGAAATCTATGAGAAGT 1287 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1323 TCTGAGGACCTTGCTCGAATGTGTCCAGTTAATATTTTTAAAGGGAAATCTATGAGAAGT 1382 Query 1288 AACAATATTCAGAGTAAGAATTT-AAATTTTGAAGGACAGGGACCATGTGGCCAAGAGCC 1346 ||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 1383 AACAATATTCAGAGTAAGA-TTCCAAATATTGAAGGACAGGGACCATGTGGCCAAGAGCC 1441 Query 1347 GCCTCTGCTGATCCAGTTTCGGATTTTTTATAATGGCTATGCTGTTAAGGGAACTTTTCT 1406 |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 1442 GCCTCTGCTGATCCAGTTTCGGATGTTTCATAATGGCTATGCTGTTAAGGGAACTTTTCT 1501 Query 1407 CACAAACAAGAAACTTCCTCCTCGGACTGTCCAGGTTCGACCTTCTATGATCAAGGTGTA 1466 |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| | Sbjct 1502 CACAAACAAGAAACTTCCTCCTTGGACTGTCCAGGTTCGGCCTTCTATGATCAAGGTGAA 1561 Query 1467 TGAAGATCGAACCTTGTCAAATCTTAGTACCTTTAACTCCTTGGAGGTAGTCACTACAAG 1526 |||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 1562 TGAAGATCAAACCATGTCAAATTTTAGTACCTTTAACTCCCTGGAGGTAGTCACTACAAG 1621 Query 1527 TAATCCACCAAGAAAGGCGAGGCTATCAAGAAATTTGGTGGCGCTACTTAGTTATGGAGG 1586 ||||||||||||||| ||||||||||||||||||||||| || || |||||||||||||| Sbjct 1622 TAATCCACCAAGAAATGCGAGGCTATCAAGAAATTTGGTCGCTCTGCTTAGTTATGGAGG 1681 Query 1587 AGTCCCTAATGACTTCTTTTTGAATATATTGCGCAACACGCTGGAAGAGTCCAAAACCAT 1646 |||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct 1682 AGTCCCTAATGACTTCTTTTTGAATATACTGCGGAACACATTGGAAGAGTCCAAAACCAT 1741 Query 1647 ATTCTACAGTGAACGTGCTGCGTTTAAAG 1675 ||||||||| ||||||||||||||||||| Sbjct 1742 ATTCTACAGCGAACGTGCTGCGTTTAAAG 1770 Score = 1101 bits (596), Expect = 0.0 Identities = 788/875 (90%), Gaps = 35/875 (4%) Strand=Plus/Plus Query 1 ATGATGAACAATGGCTGCGATGAAGTCTCTCCGCGGTCAGAGATCGCTCTTCTGGGTAGT 60 |||||||| | ||| |||||||||| ||||||||| ||||||||||||||||||||||| Sbjct 21 ATGATGAATTACGGCAGCGATGAAGTTTCTCCGCGGACAGAGATCGCTCTTCTGGGTAGT 80 Query 61 GTTGAAACAATGTTGGAGAAAATCTACGAGAAACACAATCATCGTCTTCCGATAAGTGTG 120 |||||||| ||||||||||||||||||||||||||||| || | || |||||||| ||| Sbjct 81 GTTGAAACCATGTTGGAGAAAATCTACGAGAAACACAAGCAGCATCGTCCGATAAAAGTG 140 Query 121 GAGACAAGGCGAAAACTTTCTTCGATTTCTGAGGAATTGGCTCTGGAAACACTTAGGAAA 180 ||||||||||| | |||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 141 GAGACAAGGCGGAGACTTTCTTCGATTTCTGAGGAATTGGCTTTGGAAACACTCAGGAAA 200 Query 181 GTTTTCAATAAGCCGTATTTGAAGACCCTCGATGGGTTAATCATGTATTTTGTTAA-AGG 239 |||||||| | ||||||| ||||||||||||||||| ||||||||||||||||||| | Sbjct 201 GTTTTCAACATGCCGTATGTGAAGACCCTCGATGGGATAATCATGTATTTTGTTAACAAT 260 Query 240 GACAGTCACTGTTGATGGCTCTCCACGCCTGAGTCCCGGCGAGTCTCCAGTACAGTCTCC 299 | | | |||||||||||| || || | || || | |||| | ||| Sbjct 261 G-CGGCCACTGTTGATGG--CT------CT---T-----CG-GT-T-CAGT---G--TCC 295 Query 300 TAGAACTCCTGCCaaaaaaaGTTGCAGGGC-TTCTCAAGATGTGTCTCTTGATTTGGAAA 358 ||||||||||| ||||||||||||| ||| || ||||||||||||| |||||||||||| Sbjct 296 TAGAACTCCTGGGAAAAAAAGTTGCA-GGCTTTTTCAAGATGTGTCTATTGATTTGGAAA 354 Query 359 CTCCCTCTCCTAAGTTCATGAAAAGAGAAGAAAATGGTGG---ATCTAAGTACATTCCTC 415 |||| |||||||||||| ||| ||||||||||||||| || ||||||| ||||||||| Sbjct 355 CTCCATCTCCTAAGTTCTTGAGAAGAGAAGAAAATGGAGGATCATCTAAGCACATTCCTC 414 Query 416 CGCTTTTAGCT-TTGGGTGAACTTGAATTCAAGAAGGCGTTTCTGTTGCTTAGCTATATT 474 |||| |||||| || ||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 415 CGCTATTAGCTCTT-GGTGAACTTGAATTCAACAAGGCTTTTCTGTTGCTTAGCTATATT 473 Query 475 GGAGGGGAATCCCTTGTTGAGGAGGTTATATCTGGTGATCAGATCAGAAAATGGAAGGAT 534 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct 474 GGAGGGGAATCCCTGGTTGAGGAGGTTATATCTGGTGATGAGATCAGAAAATGGAAGGAT 533 Query 535 TTGCCAATGGTTTCATATGAAGCAGCGGTTTGGAACCGGTTGGGACAGCGTTATTGTTCC 594 |||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct 534 TTGCCAATGGTTGAATATGAAGCAGAGGTTTGGAACCGGTTGGGACAGCGTTATTG-TCC 592 Query 595 CCC-AAGGAGCGAAGAAGGCCACTTGAAGGGGATAGTGGGATGACCCATTACTATCAATG 653 ||| ||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||| Sbjct 593 CCCAAAGGAGCGAAGAAGGTCACTTGAAGGGGATAGTGGGAAGACTCATTACTATCAATG 652 Query 654 TCATGTTGCTACCGATGGTAGTTACAAATTCAAGGGTCATCTTCTGGAGAACACTGGAAC 713 |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 653 TCATGTTGCTCCCGATGGTAGTTACAAATTCAAGGGTTATCTTCTGGAGGACACTGGAAC 712 Query 714 ACACCTGCACAAGGTTTTGGGTGATGATAACGTTCTAACTGTCAAATTTGATAAAGTGTT 773 |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| Sbjct 713 ACACCTGCACAAGGTTTTGGGTGATGATAACGTTTTAACCGTCAAATTCGATAAAGTGTT 772 Query 774 AGGCGTGGAAACCTATTGTAATGACCTTTACTCTACATACAAAGGGATTGCTAAGAATGG 833 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 773 AGGCGAGGAAACCTATTGTAATGACCTTTACTCTACATACAAAGGGATTGCTAAGAATGG 832 Query 834 TATCATGGTTGGGTTACGCCGTTATCGATTTTTTG 868 ||||||||||||||||||||||||||||||||||| Sbjct 833 TATCATGGTTGGGTTACGCCGTTATCGATTTTTTG 867 > Ahg319567 jgi|Araly1|319567|fgenesh1_pm.C_scaffold_3002583 Length=2682 Score = 1365 bits (739), Expect = 0.0 Identities = 1378/1671 (82%), Gaps = 106/1671 (6%) Strand=Plus/Plus Query 13 GGCTGCGATGAAGTCTCTCCGCGGTCAGAGATCGCTCTTCTGGGTAGTGTTGAAACAATG 72 ||| |||||||||| | | |||||||||| |||| ||||||||||||||||||||| ||| Sbjct 16 GGCGGCGATGAAGTTTTTTCGCGGTCAGAAATCGTTCTTCTGGGTAGTGTTGAAACCATG 75 Query 73 TTGGAGAAAATCTACGAGAAACACAATCATCGTCTTCCGATAAGTGTGGAGACAAGGCGA 132 |||||||||||||||| |||||||||||||| || |||||||| ||||||||||| || Sbjct 76 TTGGAGAAAATCTACGGGAAACACAATCATCATCCTCCGATAAAAGTGGAGACAAGACGG 135 Query 133 AAACTTTCTTCGATTTCTGAGGAATTGGCTCTGGAAACACTTAGGAAAGTTTTCAATAAG 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||| | Sbjct 136 AAACTTTCTTCGATTTCTGAGGAATTGGCTTTGGAAACACTCAGGAAAGTTCTCAATATG 195 Query 193 CCGTATTTGAAGACCCTCGATGGGTTAATCATGTATTTTGTTAA-AGGGACAGTCACTGT 251 |||| ||||||| ||||||||| ||||||||||||| ||||| | | | | |||||| Sbjct 196 GAGTATGTGAAGACTCTCGATGGGATAATCATGTATTTCGTTAACAATG-CGGCCACTGT 254 Query 252 TGATGGCTCTCCACGCCTGAGTCCCGGCGAGTCTCCAG-TACAGTCTCCTAGAACTCCTG 310 ||||||||||||||| |||||| |||| |||||||| | | |||||||||| |||||||| Sbjct 255 TGATGGCTCTCCACGGCTGAGTTCCGGTGAGTCTCC-GCTTCAGTCTCCTACAACTCCTG 313 Query 311 CCaaaaaaaGTTGCAGGGCTTCTCAAGATGTGTCTCTTGATTTG-GAA-ACTCCCTCTCC 368 ||||| | | || ||||||||||| | | ||| | ||| ||||| Sbjct 314 --GGAAAAA-----A--G-------AG--GTGTCTCTTGA-TGGTGAAGA-TCCGTCTCC 353 Query 369 TAAGTTCATGAAAAGAGAAGAAAATGGTGGATCTAAGT-ACATTCCTCCGCTTTTAGCTT 427 ||||||| ||| |||||| |||| ||| || |||| | ||||||||||||| |||||| Sbjct 354 TAAGTTCTTGAGAAGAGATGAAACTGGAAGAACTAA-TCACATTCCTCCGCTAGTAGCTT 412 Query 428 TGGGTGAACTTGAATTCAAGAAGGCGTTTCTGTTGCTTAGCTATATTGGAGGGGAATC-- 485 |||||||||||||||| |||||||||||||||||||||| |||| | ||||| | ||| Sbjct 413 TGGGTGAACTTGAATTTAAGAAGGCGTTTCTGTTGCTTACCTATCTCGGAGGTG-ATCGT 471 Query 486 CCTTGTT----G--A-------G-GAGGTTATATCTGGTGATCAGATCAGAAAATGGAAG 531 ||||| | | | |||||||||||||||||| |||||||| |||||||| Sbjct 472 TTTTGTTACAGGAAATCCCTGGGTGAGGTTATATCTGGTGATGAGATCAGACAATGGAAG 531 Query 532 GATTTGCCAATGGTTTCATATG-AAGCAGCGGTTTGGAACCGGTTGGGACAGCGTTATTG 590 ||||||||||||||| |||||| ||| || | | | |||| || | ||| Sbjct 532 GATTTGCCAATGGTTGCATATGAAAG-TGCAG--T-G---TGGTT----CA-AG---TTG 576 Query 591 TTCCCCCAAGGAGCGAAGAAGGC-CACTTGAAGGGGATAGTGGGATGACCCATTACTATC 649 || || |||| ||||| | | |||||| |||||| |||| ||| |||||||||| Sbjct 577 -GGCCAAAACGAGCAAAGAA-TCTCGCTTGAATCGGATAGCGGGAAGACTCATTACTATC 634 Query 650 AATGTCATGTTGCTACCGATGGTAGTTACAAATTCAAGGGTCATCTTCTGGAGAACACTG 709 ||||||||||| || ||||||||||||||| ||| |||||| |||| ||||||||||||| Sbjct 635 AATGTCATGTTACTCCCGATGGTAGTTACAGATTTAAGGGTTATCTACTGGAGAACACTG 694 Query 710 GAACACACCTGCACAAGGTTTTGGGTGATGATAACGTTCTAACTGTCAAATTTGATAAAG 769 |||||||||||||||||||||||||||||||||| ||| | || |||||||||||| || Sbjct 695 GAACACACCTGCACAAGGTTTTGGGTGATGATAATGTTTTGACCGTCAAATTTGATCAAT 754 Query 770 T--GTTAGGCGTGGAAACCTATTGTAATGACCTTTACTCTACATACAAAGGGATTGCTAA 827 | ||| || |||||| ||||| |||| |||||||| | |||||||||||||||| Sbjct 755 TACCAAAGGAGT--CAACCTACTGTAACGACCCTTACTCTAAACACAAAGGGATTGCTAA 812 Query 828 GAATGGTATCATGGTTGGGTTACGCCGTTATCGATTTTTTGTTTTCAAAGATGGAGGGAA 887 |||||||||||||||||| ||||| ||||||| | ||||||||||||||||||||||||| Sbjct 813 GAATGGTATCATGGTTGGTTTACGTCGTTATCAAATTTTTGTTTTCAAAGATGGAGGGAA 872 Query 888 AGAAGAGAAGAAGAA-AGATGTTTCTACAAAGGGAGTTAAATGCTACTTTATACGCACAG 946 || |||||| ||||| ||| || |||||||| ||| ||||| ||||||||||||| | Sbjct 873 AGCAGAGAAAAAGAAGAGAAATT-CTACAAAGCAAGTGAAATGTTACTTTATACGCATGG 931 Query 947 ACTCGACAGCTTCAATTGATATGCAAAATCCCTATATC-TTCGCCGGAAAGTCAATGCAT 1005 |||| ||||| || | ||||||| |||||||||||||| || ||||| | ||| || ||| Sbjct 932 ACTCTACAGCGTCTAGTGATATGGAAAATCCCTATATCCTT-GCCGGGATGTCTATTCAT 990 Query 1006 GAAGCACGTATGCATTTTATGCATGTGAATACTTTGTCATCTTTGCCCAACTATATGTCA 1065 ||||| || |||||||||||||||||| |||| ||| | ||| | ||||||||||| || Sbjct 991 GAAGCTCGGATGCATTTTATGCATGTGCATACATTGCCTTCTCCGGCCAACTATATGGCA 1050 Query 1066 AGGTTTTCTTTAATTCTGTCAAAGACTAAAACGCTCGAAGTTGACATGACTGGAATTACC 1125 ||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| Sbjct 1051 CGGTTTTCTTTAATTCTGTCAAAGACAAAAAAGCTTGAAGTTGACATGACTGGGATTACC 1110 Query 1126 TTTGAGCAAATCGATGATATACACTGCCATGATCAA-GATGATAAGGATGTTCTTGACAA 1184 | |||||||||||||||||||||||||||||||| | | |||| ||||||||||| || Sbjct 1111 GTCAAGCAAATCGATGATATACACTGCCATGATCAAAG-TAATAATGATGTTCTTGATAA 1169 Query 1185 GAATGGGAAACCTTGTATACATTCAGATGGAACTGGCTACATCTCTGAGGACCTTGCTCG 1244 ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 1170 GAATGGGAAACCTCGTATACACTCAGATGGAACTGGATACATCTCTGAGGACCTTGCTCG 1229 Query 1245 GATGTGTCCAGTTAATATTTTTAAAGGGAAAT-CTATGAGAAGTAACAATATTCAGAGTA 1303 |||||||||||| ||||||| |||||||||| | || | |||| ||| ||||||| | Sbjct 1230 GATGTGTCCAGTAAATATTTATAAAGGGAAAAAC-ATCAAAAGTGACATTATTCAG-G-- 1285 Query 1304 AGAATTTAAATTTTGAAGGACAGGGACCATGTGGCCAAGAGCCGCCTCTGCTGATCCAGT 1363 ||| ||| | | ||||||||||||||||||||||||||||| Sbjct 1286 -GAA---AAA----------C-----C--TGTGGCCAAGAGCCGCCTCTGCTGATCCAAA 1324 Query 1364 TTCGGATTTTTTATAATGGCTATGCTGTTAAGGGAACTTTTCTCAC-AAACAAGAAACTT 1422 ||||||| ||| || |||||| |||||||||||||| |||||| | ||||||||| ||| Sbjct 1325 TTCGGATGTTTAATGATGGCTCTGCTGTTAAGGGAATTTTTCT-ATTAAACAAGAACCTT 1383 Query 1423 CCTCCTCGGACTGTCCAGGTTCGACCTTCTATGATCAAGGTGTATGAAGATCGAACCTTG 1482 ||||| ||||| ||||||||||||||||||||||||||||||||| ||||| || ||| Sbjct 1384 CCTCCACGGACCGTCCAGGTTCGACCTTCTATGATCAAGGTGTATAAAGATAAAAATTTG 1443 Query 1483 TCAAATCTTAGTACCTTTAACTCCTTGGAGGTAGTCACTACAAGTAATCCACCAAGAAAG 1542 |||||| |||| || ||||||||| |||||||||||||||||||||||||||||| |||| Sbjct 1444 TCAAATTTTAGCACTTTTAACTCCCTGGAGGTAGTCACTACAAGTAATCCACCAA-AAAG 1502 Query 1543 -GCGAGGCTATC-AAGAAATTTGGTGGCGCTACTTAGTTATGGAGGAGTCCCTAATGACT 1600 |||| |||||| ||||| |||||| ||||| || || ||||||||||| || ||||| | Sbjct 1503 AGCGAAGCTATCGAAGAA-TTTGGTCGCGCTGCTGAGCTATGGAGGAGTGCCAAATGATT 1561 Query 1601 TCTTTTTGAATATATTGCGCAACACGCTGGAAGAGTCCAAAACCATATTCT 1651 | |||||| ||||||||| ||||||| ||||| || || ||| |||||| Sbjct 1562 TTTTTTTGGATATATTGCTCAACACGTTGGAAAAGAAGAATACCGTATTCT 1612 Score = 139 bits (75), Expect = 1e-31 Identities = 144/176 (82%), Gaps = 10/176 (6%) Strand=Plus/Plus Query 2400 TGCTCTTGATGCACCAAAAAAGGGGGCTAAGGTTGATCTCCCGCCCGATC-TAGAGATCA 2458 |||| ||||||||||||||| |||| || |||| |||||||| ||| | || || | Sbjct 2322 TGCTATTGATGCACCAAAAACGGGGACTGAGGTCAATCTCCCGTTCGA-CGTAAAGGCCG 2380 Query 2459 AAAATTTTCCACATTACATGGAGCGTGACCCTAAGAGAGATTTCAGGTCCACTTCTATTC 2518 | |||||||||||| |||||| | || ||| | | | |||| ||||| |||||||| Sbjct 2381 ATGTTTTTCCACATTATATGGAGAG-GA--ATAA-A-ATA-TTCAAGTCCATTTCTATTC 2434 Query 2519 TTGGATTAATCTTTGACACTGTGGATTCTCATAATGCAGAGGAACCCC-CACCATC 2573 |||| |||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 2435 TTGGTTTAATCTTTGACACTGTGGATTCTCATAATGCAGAGGA-CCCCACACCATC 2489 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 112480493485 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5