BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G19920.1
Length=2784
Score E
Sequences producing significant alignments: (Bits) Value
Ahg319567 jgi|Araly1|319567|fgenesh1_pm.C_scaffold_3002583 2200 0.0
Ahg480480 jgi|Araly1|480480|fgenesh2_kg.3__3181__AT2G19930.1 1977 0.0
Ahg931400 jgi|Araly1|931400|scaffold_303857.1 756 0.0
> Ahg319567 jgi|Araly1|319567|fgenesh1_pm.C_scaffold_3002583
Length=2682
Score = 2200 bits (1191), Expect = 0.0
Identities = 1501/1643 (91%), Gaps = 52/1643 (3%)
Strand=Plus/Plus
Query 32 GCGATCAAGGTTTTTCGTGGTCAGAAATTGCTCTTCTGGGTAGTGTTGAAACAATGTTGG 91
||||| ||| ||||||| |||||||||| | ||||||||||||||||||||| |||||||
Sbjct 20 GCGATGAAGTTTTTTCGCGGTCAGAAATCGTTCTTCTGGGTAGTGTTGAAACCATGTTGG 79
Query 92 AGAAAGTCTACGGGAAACACAATCATCATCCTCCGATAAAAGTGGAGACAAGACGGAGAC 151
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 80 AGAAAATCTACGGGAAACACAATCATCATCCTCCGATAAAAGTGGAGACAAGACGGAAAC 139
Query 152 TTTCTTCGATTTCTGAGGAATTGGCTTTGGAAACACTCAGGAAAGTTCTCAATATGCCGA 211
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 140 TTTCTTCGATTTCTGAGGAATTGGCTTTGGAAACACTCAGGAAAGTTCTCAATATGGAGT 199
Query 212 ATGTGAAGACCCTCGATGGGATAATCATATATTTTC-TTAACGATGCGGTCACCGTTGAT 270
|||||||||| ||||||||||||||||| || |||| ||||| |||||| ||| ||||||
Sbjct 200 ATGTGAAGACTCTCGATGGGATAATCATGTA-TTTCGTTAACAATGCGGCCACTGTTGAT 258
Query 271 GGCTCTCCTCGCCTGTGGTCTGGCGAGTCTCCAG-TACAGTTTCCTAGAACTCCCGGGaa 329
|||||||| || ||| | || || |||||||| | | |||| ||||| |||||| |||
Sbjct 259 GGCTCTCCACGGCTGAGTTCCGGTGAGTCTCC-GCTTCAGTCTCCTACAACTCCTGGG-- 315
Query 330 aaaaaGTTGCAGGGCTTCTCAAGCAGAGGTGTCTCTTGATCGTGAAGATCCGTCTCCTAA 389
|| | || |||||||||||||||| |||||||||||||||||||
Sbjct 316 ---AA-----A---------AA--AGAGGTGTCTCTTGATGGTGAAGATCCGTCTCCTAA 356
Query 390 GTTCTTGAGAGGAGATGAAAATGG-AGAATCTAAGCACATTTCTCTTCTATTAGCTTTGG 448
|||||||||| ||||||||| ||| |||| |||| |||||| ||| ||| |||||||||
Sbjct 357 GTTCTTGAGAAGAGATGAAACTGGAAGAA-CTAATCACATTCCTCCGCTAGTAGCTTTGG 415
Query 449 GTGAACTTGAATTCAAGAAGGCGTTTTTGTTGCTTACCTA--TC-----T--T-G----- 493
||||||||||||| |||||||||||| ||||||||||||| || | | |
Sbjct 416 GTGAACTTGAATTTAAGAAGGCGTTTCTGTTGCTTACCTATCTCGGAGGTGATCGTTTTT 475
Query 494 G--A-GGGAAATCTCTGGGTGAGGTTATATCTGGTGATGAGATCAGACAATGGAAGGATT 550
| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 476 GTTACAGGAAATCCCTGGGTGAGGTTATATCTGGTGATGAGATCAGACAATGGAAGGATT 535
Query 551 TGCCAATGGTTGCATATGAAAGAGCAGTGTGGTTCAAGTTGGGCCAAAACGAGGAAAGAA 610
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct 536 TGCCAATGGTTGCATATGAAAGTGCAGTGTGGTTCAAGTTGGGCCAAAACGAGCAAAGAA 595
Query 611 TGC-AGCTTGAATCGGATAGCGGGAAGACTCATTACTATCAATGTCATGTTGCTCCCGAT 669
| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 596 T-CTCGCTTGAATCGGATAGCGGGAAGACTCATTACTATCAATGTCATGTTACTCCCGAT 654
Query 670 GGTAGCTACAGATTAAAGGGTTATTTTCTGGAGAACACTGGAACACACCTGCACAAGGTT 729
||||| |||||||| ||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 655 GGTAGTTACAGATTTAAGGGTTATCTACTGGAGAACACTGGAACACACCTGCACAAGGTT 714
Query 730 TTGGGTGATGATAATGTTTTAACCGTTAGATTCGATCAATTACCAAAGGAGTCAACATAC 789
|||||||||||||||||||| ||||| | ||| ||||||||||||||||||||||| |||
Sbjct 715 TTGGGTGATGATAATGTTTTGACCGTCAAATTTGATCAATTACCAAAGGAGTCAACCTAC 774
Query 790 TGTGACAACCCTTACTCTAAATACAAAGAGATTGCTAAGAATGGTATCATGGTTGGTTTA 849
||| || |||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 775 TGTAACGACCCTTACTCTAAACACAAAGGGATTGCTAAGAATGGTATCATGGTTGGTTTA 834
Query 850 CGTCGTTATCAATTTTTTGTCTTCAAAGATGGAGGGAAAGCAGAGAAAAAGAAGAGAAAT 909
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 835 CGTCGTTATCAAATTTTTGTTTTCAAAGATGGAGGGAAAGCAGAGAAAAAGAAGAGAAAT 894
Query 910 TCTACAAAGCAAGTGAAATGCTACTTCATACGCACGGGTTCTACAGCATCCAGTGATATG 969
|||||||||||||||||||| ||||| ||||||| || |||||||| || |||||||||
Sbjct 895 TCTACAAAGCAAGTGAAATGTTACTTTATACGCATGGACTCTACAGCGTCTAGTGATATG 954
Query 970 GAGAATCCTTATATCCTTTCCGGGATGTCAATTCATGAAGCTCGTATGCATTTTATGCAT 1029
|| ||||| ||||||||| |||||||||| |||||||||||||| |||||||||||||||
Sbjct 955 GAAAATCCCTATATCCTTGCCGGGATGTCTATTCATGAAGCTCGGATGCATTTTATGCAT 1014
Query 1030 GTGCATACATTGCCTTCTCCCGCCAACTATATGGCAAGGTTTTCTTTAATTCTGTCAAAG 1089
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 1015 GTGCATACATTGCCTTCTCCGGCCAACTATATGGCACGGTTTTCTTTAATTCTGTCAAAG 1074
Query 1090 ACAAAAAAGCTTGAAGTTGACATGACTGAGATTACCGTCATGCAAATCGATGATATACAC 1149
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1075 ACAAAAAAGCTTGAAGTTGACATGACTGGGATTACCGTCAAGCAAATCGATGATATACAC 1134
Query 1150 TGCCATGATCAAAGTAATAATGATGTTCTTGATAAGAATGGGAAACCTCGTATACACTCA 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1135 TGCCATGATCAAAGTAATAATGATGTTCTTGATAAGAATGGGAAACCTCGTATACACTCA 1194
Query 1210 GATGGAACTGGATACATCTCTGAGGACCTTGCTCGGATGTGTCCATTAAATATTTTTAAA 1269
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 1195 GATGGAACTGGATACATCTCTGAGGACCTTGCTCGGATGTGTCCAGTAAATATTTATAAA 1254
Query 1270 GGGAAAT-CTATGAGAAGTAACAATATTCAGGGAA---CCTGTGTCCAAGAGCCGCCTCT 1325
|||||| | || | |||| ||| ||||||||||| |||||| |||||||||||||||
Sbjct 1255 GGGAAAAAC-ATCAAAAGTGACATTATTCAGGGAAAAACCTGTGGCCAAGAGCCGCCTCT 1313
Query 1326 GCTGATCCAAATTCGGATGTTTAATGATGGCTCTGCTGTTAAGGGAATTTTCCTATTAAA 1385
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1314 GCTGATCCAAATTCGGATGTTTAATGATGGCTCTGCTGTTAAGGGAATTTTTCTATTAAA 1373
Query 1386 CAAGAACCTTCCTCCACAGACCGTCCAGGTTCGACCTTCTATGATCAAGGTGTATAAAGA 1445
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374 CAAGAACCTTCCTCCACGGACCGTCCAGGTTCGACCTTCTATGATCAAGGTGTATAAAGA 1433
Query 1446 TAAAAATTTGTCAAATTTTAGCACGTTTAACTCCCTGGAGGTAGTCACTACAAGTAATCC 1505
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1434 TAAAAATTTGTCAAATTTTAGCACTTTTAACTCCCTGGAGGTAGTCACTACAAGTAATCC 1493
Query 1506 ACCAAAAAGAGCGAAGCTATCGAAGAATTTAGTCGCGCTGCTGAGCTATGGAGGAGTGCC 1565
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1494 ACCAAAAAGAGCGAAGCTATCGAAGAATTTGGTCGCGCTGCTGAGCTATGGAGGAGTGCC 1553
Query 1566 AAATGATTTCTTTTTGGATATATTGCTCAACACGTTGGAAAAGAAGAAAACCATATTCTT 1625
||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 1554 AAATGATTTTTTTTTGGATATATTGCTCAACACGTTGGAAAAGAAGAATACCGTATTCTT 1613
Query 1626 CAAAGTACGTGCAGCGGGTAAAG 1648
|||| |||| |||||||||||||
Sbjct 1614 CAAAATACGCGCAGCGGGTAAAG 1636
Score = 837 bits (453), Expect = 0.0
Identities = 597/661 (90%), Gaps = 32/661 (5%)
Strand=Plus/Plus
Query 1647 AGCTGCACTTCATTATGGGAATATGGACGATAAGAACGCTTTACAAATGATCATGGCTGG 1706
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1690 AGCTGCACTTCGTTA-CGGAATATGGACGATAAGAACGCTTTACAAATGATCATGGCTGG 1748
Query 1707 TATCCCCCTTGATGAGCCATATTTGAAGCATTATCTGTCTAAACTCTTAAAGTTAGAGAA 1766
||||||||||||||||||||||||||||||| |||| ||| ||||||||| || ||||
Sbjct 1749 TATCCCCCTTGATGAGCCATATTTGAAGCATCATCTATCTCTTCTCTTAAAGATAAAGAA 1808
Query 1767 AGATGATCTCAAAGCAGGAAAACTTCCTATTGACGAATCATACTATCTCATGGGGACAGT 1826
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1809 AGATGATCTCAAAGCAGGAAGACTTCCTATTGACGAATCATACTATCTCATGGGGACAGT 1868
Query 1827 GGATCCCACCGGAGAGCTAAAGGAAGATGAAGTCTCGGGTCTGGCCAAATCTCAGGATGT 1886
|||||||||||||||||| | ||| ||| | | | || ||| | |||
Sbjct 1869 GGATCCCACCGGAGAGCT--A--AAG--GAA-------G-AT-G--AAGTCT---G-TGT 1907
Query 1887 GCTAGTTTACAGGAATCCTGGACTACATTTTGGAGACATACATATTCTAAAGGCTACATA 1946
| | | | ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1908 -C-A---T-CCTGAATCCTGGACTACATTTTGGAGACATACATATTCTACAGGCTACATA 1961
Query 1947 TGTTAAATCCTTGGAACAGTATGTTGGAAATTCCAAGTATGGTGTGTTCTTCCCTCAAAA 2006
||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct 1962 TGTTAAAACCTTGGAACAGTATGTCGGAAATTCCAAGTATGCTGTGTTCTTCCCTCAAAA 2021
Query 2007 AGGTCCAAGATCTTTGGGAGACGAAATTGCAGGTGGTGACTTTGATGGCGATATGTATTT 2066
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 2022 AGGTCCAAGATCTTTGGGCGACGAAATTGCAGGTGGTGATTTTGATGGCGATATGTATTT 2081
Query 2067 CATATCCAGAAATCCCAAGCTACTTGAGCACTACAAGCCAAGTGAACCGTGGGTGAGTTC 2126
| |||||||||||||||||||||| || |||| |||||||||| ||||||||||||||||
Sbjct 2082 CGTATCCAGAAATCCCAAGCTACTCGAACACTTCAAGCCAAGTCAACCGTGGGTGAGTTC 2141
Query 2127 TTCTCCACGTAGTAAAATTTACACTGGTAGACAA-CCAAGTGAACTTTCACCCGAACAGT 2185
|||||||| ||||||||||||| |||||||| || |||||||||||||||||||||||||
Sbjct 2142 TTCTCCACCTAGTAAAATTTACTCTGGTAGA-AAGCCAAGTGAACTTTCACCCGAACAGT 2200
Query 2186 TGGAAGAAGAGCTTTTCAAAATCTTCTTAAAGACAGGATTTAGTCCCAGCTCA-GTTATA 2244
||||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||
Sbjct 2201 TGGAAGAAGAGCTTTTCAACATGTTCTTAAAGACAGGATTTAGTCCCAGCA-ATGTTATA 2259
Query 2245 GGACAGGCTGCAGATAGCTGGCTAGCAATAATGGACCGGTTCCTCACCTTAGGAGATGAG 2304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 2260 GGACAGGCTGCAGATAGCTGGCTAGCAATAATGGACCGCTTCCTCACCTTAGGAGCTGAG 2319
Query 2305 A 2305
|
Sbjct 2320 A 2320
Score = 422 bits (228), Expect = 9e-117
Identities = 311/347 (90%), Gaps = 21/347 (6%)
Strand=Plus/Plus
Query 2367 TGCTATTGATGCACCAAAAACGGGGACTGAGGTCAATCTCCCGTTAGACGTAAAGGTCGA 2426
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 2322 TGCTATTGATGCACCAAAAACGGGGACTGAGGTCAATCTCCCGTTCGACGTAAAGGCCGA 2381
Query 2427 TCTTTTTCCACATTATATGGAGAGGAATAAAACATTCAAGTCCACTTCTATTCTTGGATT 2486
| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||
Sbjct 2382 TGTTTTTCCACATTATATGGAGAGGAATAAAATATTCAAGTCCATTTCTATTCTTGGTTT 2441
Query 2487 AATCTTTGACACTGTGGATTTTCATAATGCAGAGGACACCACACCATC---T--GG---A 2538
|||||||||||||||||||| |||||||||||||||| |||||||||| | || |
Sbjct 2442 AATCTTTGACACTGTGGATTCTCATAATGCAGAGGACCCCACACCATCCGCTCTGGGTTA 2501
Query 2539 ------A----TCAGTAAACTTCAGTGTTTTGAAGATGAGCCGGTCTCTGAGTTTGACAT 2588
| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2502 CCTTTCAGAAATCAGTAAACTCCAGTGTTTTGAAGATGAGCCGGTCTCTGAGTTTGACAT 2561
Query 2589 GGAGAAATGTAAACTCTGGCACAAGGATTACAGAAAGGAGATGTGTCAAGCGATGAACTC 2648
||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2562 GGAGAAATGTAAAAGCTGGCACAAGGATTACAGAAAGGAGATGTGTCAAGCGATGCACTC 2621
Query 2649 AGATGATGATGATTCCTGTAATGAAGTTATCCAGAAATACAAGCAGG 2695
|||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct 2622 ---TGATGATGATTCCTGTGATGAAGTAATCCAGAAATACAAGAAGG 2665
> Ahg480480 jgi|Araly1|480480|fgenesh2_kg.3__3181__AT2G19930.1
Length=3107
Score = 1977 bits (1070), Expect = 0.0
Identities = 2056/2517 (82%), Gaps = 128/2517 (5%)
Strand=Plus/Plus
Query 337 TGCAGGGCTTC-TCAAGCAGAGGTGTCTCTTGA-TCGTGAAGATCCGTCTCCTAAGTTC- 393
||||||| ||| ||||| |||| ||||| |||| || ||| | ||| ||||||||| ||
Sbjct 322 TGCAGGG-TTCTTCAAGAAGAGATGTCTGTTGATTC-TGATGCTCCTTCTCCTAAG-TCT 378
Query 394 TTGAGAGGAGATGAAAATGGAGAATCTAAGCACATTTCTCTTCTATTAGCTTTGGGTGAA 453
|||| | | || |||||||||| |||| ||||||| | | || ||||||||||||||
Sbjct 379 TTGAAAAGTGAAGAAAATGGAGGATCTCTGCACATTCCACAGCTGGTAGCTTTGGGTGAA 438
Query 454 CTTGAATTCAAGAAGGCGTTTTTGTTGCTTACCTATCTTGGAGGGAAATC-TCTGGGTGA 512
|||||||| ||||||||||||||||| |||| |||| || |||| || | ||||| |
Sbjct 439 CTTGAATTTAAGAAGGCGTTTTTGTTACTTAGCTATATTCCAGGGCAA-CAACTGGGCCA 497
Query 513 GGTTATATCTGGTGATGAGA-TCAGACAATGGAAGGATTTGCCAATGGTTGCATATGAAA 571
||||| | ||| |||||||| || ||| |||||| |||||||||||||||||||||| ||
Sbjct 498 GGTTACAACTGCTGATGAGATTC-GACTATGGAAAGATTTGCCAATGGTTGCATATG-AA 555
Query 572 G-AGCAGTGTGGTTCAAG-TTGGG-C--CA--A-----AAC-GA-GGAAAGAATGCAG-C 616
| ||| || ||| | | ||||| | || | | || || ||| | ||
Sbjct 556 GCAGCCGTTTGGGAC-CGTTTGGGCCGGCATTATTGTCCTCAGACAGACCGAA-G-AGTG 612
Query 617 TTG-AATCGGATAGCGGGAAGACTCATTACTATCAATGTCATGTTGCTCCCGATGGTAGC 675
||| ||| |||||| || ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 613 TTGCAATGGGATAGTGGCAAGACCCATTACTATCAGTGTCATGTTGCTCCCGATGGTAGC 672
Query 676 TACAGATTAAAGGGTTATTTTCTGGAGA-ACACTGGAACACACCTGCACAAGGTTTTGGG 734
|||| ||| ||||| |||| || | |||||||||||||| |||||||||| |||||
Sbjct 673 TACACATTCAAGGGCCCCCTTCTTGA-ACACACTGGAACACACTTGCACAAGGTCTTGGG 731
Query 735 TGATGATAATGTTTTAACCGTTAGATTCGATC-AAT-TACC---AAA-GGAGTCAACATA 788
|||||| ||||||||||| || | ||||| | || | || ||| | ||||||||
Sbjct 732 TGATGAAAATGTTTTAACTGTCAAATTCG--CGGATGTCCCGAAAAACTCA-TCAACATA 788
Query 789 CT-GTGACAACCCTTACTCTAAATACAAAGAGATTGCTAAGAATGGTATCATGGTTGGTT 847
| | | ||| ||| | || ||||||||| ||||| ||||| ||||||||| ||||||
Sbjct 789 -TAGCAATGACCGTTATTTTACATACAAAGAAATTGCCAAGAACGGTATCATGATTGGTT 847
Query 848 TACGTCGTTATCAATTTTTTGTCTTCAAAGATGGAGGGAAAGCAGAGAAAAAGAAG--AG 905
||||||||||||| |||||||| |||||||||||| ||||| |||| |||||||| ||
Sbjct 848 TACGTCGTTATCAGTTTTTTGTTTTCAAAGATGGA-GGAAA--AGAGGAAAAGAAGAAAG 904
Query 906 A-AATTCTACAAAGCAAGTGAAATGCTACTTCATACGCACGGGTTCTACAGCATCCAGTG 964
| |||||||||| |||||||||||||||| ||||||||||| |||||||| || |||
Sbjct 905 ATCTTTCTACAAAGAAAGTGAAATGCTACTTTATACGCACGGGCTCTACAGCTTCTTGTG 964
Query 965 ATATGGAGAATCCTTATATCCTTT-CCGGGATGTCAATTCATGAAGCTCGTATGCATTTT 1023
||||||| ||||| ||||| ||| | || | ||||||||| ||||||||||||||||||
Sbjct 965 ATATGGAAAATCCCTATAT-TTTTACTGGAAAGTCAATTCACGAAGCTCGTATGCATTTT 1023
Query 1024 ATGCATGTGCATAC-ATTGCCTTCTCCCGCCAACTATATGGCAAGGTTTTCTTTAATTCT 1082
||||| |||||| | | || || || || ||||||||||||||||| ||||||||
Sbjct 1024 ATGCACGTGCAT-CGAGCACCAACTTTGGCGAATTATATGGCAAGGTTTTCCTTAATTCT 1082
Query 1083 GTCAAAGACAAAAAAGCTTGAAGTTGACATGACTGAGATTACC-GTCATGCAAATCGATG 1141
|||||||| |||| |||||||||||||||||||| ||||||| | || | ||| ||||
Sbjct 1083 CTCAAAGACTAAAACGCTTGAAGTTGACATGACTGGGATTACCTTTGAT-CCAATTGATG 1141
Query 1142 ATATACACTGCCATGATCAAAG-TAATAATGATGTTCTTGATAAGAATGGGAAACCTCGT 1200
|||||||||||||||||| ||| | || ||||||||||| ||||| |||||| ||
Sbjct 1142 ATATACACTGCCATGATC-AAGATGGGAAAGATGTTCTTGACAAGAACAAAAAACCTTGT 1200
Query 1201 ATACACTCAGATGGAACTGGATACATCTCTGAGGACCTTGCTCGGATGTGTCCATTAAAT 1260
||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1201 ATACATTCAGATGGAACTGGCTACATCTCTGAGGACCTTGCTCGGATGTGTCCCCTAAAT 1260
Query 1261 ATTTTTAAAGGGAAATCTATGAGAAGT-AACAATATTCAGGGAA-CCTGTGTCCAAGAGC 1318
|| ||||||||||||| | | |||||| || |||||||| |||| | ||| |||||| |
Sbjct 1261 ATATTTAAAGGGAAATGTCTCAGAAGTGAA-AATATTCA-GGAAGCTTGTAACCAAGACC 1318
Query 1319 CGCCTCTGCTGATCCAAATTCGGATGTTTAATGATGGCTCTGCTGTTAAGGGAA-TTTTC 1377
||||||| ||||||| ||||||||||| ||||||||| |||||||||||||| ||||
Sbjct 1319 CGCCTCTTTTGATCCAGTTTCGGATGTTTTATGATGGCTATGCTGTTAAGGGAACTTTT- 1377
Query 1378 CTATTAAACAAGAACCTTCCTCCACAGACCGTCCAGGTTCGACCTTCTATGATCAAGGTG 1437
|| ||||||||||| ||| ||| | ||| ||||||||||||||||| ||||||||||||
Sbjct 1378 CTCTTAAACAAGAAACTTTGTCCTCGGACTGTCCAGGTTCGACCTTCGATGATCAAGGTG 1437
Query 1438 TATAAAGAT-AAAAATTTGTCAAATTTTAGCACGTTTAACTCCCTGGAGGTAGTCACTAC 1496
| ||||||| | ||||||||||||||||| |||||| | |||||||||| |||||
Sbjct 1438 TCTAAAGATCCCTCA-TTGTCAAATTTTAGCACCTTTAACGCTTTGGAGGTAGTAACTAC 1496
Query 1497 AAGTAATCCACCAAAAAGAGCGAAGCTATCGAAGAATTTAGTCGCGCTGCTGAGCTATGG 1556
|||||||||||||| |||| | |||||||| || ||||| || |||||||| ||||||||
Sbjct 1497 AAGTAATCCACCAAGAAGAACAAAGCTATCAAAAAATTTGGTTGCGCTGCTTAGCTATGG 1556
Query 1557 AGGAGTGCCAAATGATTTCTTTTTGGATATATTGCTCAACACGTTGGAAAAGAAGAAAAC 1616
|||| | || ||||| ||||||||||||||||||||||||||| ||||| || ||||
Sbjct 1557 AGGAATCCCTAATGAATTCTTTTTGGATATATTGCTCAACACGCTGGAAGAGTCTAAAAG 1616
Query 1617 CATATTCTTCAA-AGTACGTGCAGCGGGTAAAGCTGCACTTCATTAT-GGGAATATGGAC 1674
|||||||| ||| | || ||| ||| ||| | ||| ||| ||||| ||||| ||||||
Sbjct 1617 CATATTCTACAACA-AACATGCTGCGCTTAATGTTGCTCTTAATTATGGGGAA-ATGGAC 1674
Query 1675 GATAAGAACGCTTTACAAATGATCA-TGGCTGGTATCCCCCTTGATGAGCCATATTTGAA 1733
|| ||||||| ||| ||||| | ||| ||||||||||||||| || ||| | |||||
Sbjct 1675 GACCAGAACGCCGCACAGATGAT-ATTGGTTGGTATCCCCCTTGACGAACCACACTTGAA 1733
Query 1734 GCATTATCTGTCTAAAC-TCTTAAAGTTAGAGAAAGATGATCTCAAAGCAGGAAAACTTC 1792
| || ||||||||| | || ||||| ||||||| |||||||||||||||||| |||||
Sbjct 1734 GAATCATCTGTCTATTCTTC-TAAAGACAGAGAAAAATGATCTCAAAGCAGGAAGACTTC 1792
Query 1793 CTATTGA-CGAATCATACTATCTCATGGGGACAGTGGATCCCACCGGAGAGCTAAAGGAA 1851
|| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1793 CT-GTGACCGAATCATACTATCTCATGGGGACAGTGGATCCCACTGGAGAGCTAAAGGAA 1851
Query 1852 GATGAAGTCTC-G--------G-GTCTGGCCAAATCTCAGGAT--GTGCTAGTTTACAGG 1899
|||||||||| | | |||||| ||||| || ||| ||| ||||||| ||
Sbjct 1852 GATGAAGTCTGTGTAATCCTTGAGTCTGGGCAAATTTCGGGAGAAGTGTTAGTTTATAGA 1911
Query 1900 AATCCTGGACTACATTTTGGAGACATACATATTCTAAAGGCTACATATGTTAAATCCTTG 1959
||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 1912 AATCCTGGATTACATTTTGGAGACATACATATTCTCAAGGCTACATATGTTAAGGCCTTG 1971
Query 1960 GAACAGTATGTTGGAAATTCCAAGTATGGTGTGTTCTTCCCTCAAAAAGGTCCAAGATCT 2019
||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct 1972 GAAGAGTATGTTGGAAATTCCAAGTATGCTGTGTTCTTCCCTCAGAAAGGTCCAAGATCC 2031
Query 2020 TTGGGAGACGAAATTGCAGGTGGTGACTTTGATGGCGATATGTATTTCATATCCAGAAAT 2079
||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 2032 TTGGGCGACGAGATTGCAGGTGGTGACTTTGATGGTGATATGTATTTCATATCAAGAAA- 2090
Query 2080 CCCA-AGCTACTTGAGCACTACAAGCCAAGTGAACCGTGGGTGAGTTCTT-CTCCACGTA 2137
||| |||| ||||| |||| ||| |||||||||||||||||||||| | |||| | |
Sbjct 2091 CCCTGAGCTGCTTGAACACTTCAAACCAAGTGAACCGTGGGTGAGTT-TGACTCCTCCCA 2149
Query 2138 GTAAAATTTACACTGGTAGA-CAACCAAGTGAACTTTCACCCGAACAGTTGGAAGAAGAG 2196
|||||| | || |||||||| | ||||| | |||||||| ||| |||||||||||||
Sbjct 2150 GTAAAAGTAACTCTGGTAGAGCG-CCAAGCCAGCTTTCACCAGAAGAGTTGGAAGAAGAA 2208
Query 2197 CTTTTCAAAATCTTCTTAAAGACAGGATTT-AGTCCCAGCTCA-GTTATAGG-ACAGGCT 2253
|||||| |||| ||| | ||| |||||||| | | ||||| | |||||||| | || ||
Sbjct 2209 CTTTTCGAAATGTTCCTGAAGGCAGGATTTCA-TGCCAGCA-ATGTTATAGGGATAG-CT 2265
Query 2254 GCAGATAGCTGGCTAGCAATAATGGACCGGTTCCTCAC-CTTAGGAGATGAGA-ATGTTA 2311
|||||||||||| || ||||||||||||| ||||| | || ||||||||||| | | |
Sbjct 2266 GCAGATAGCTGGTTAACAATAATGGACCGCTTCCTAATACT-AGGAGATGAGAGA-GCTG 2323
Query 2312 AGGAAAAAGCTGAAATGAAGAAGAAAATGCTAAAGTTGACTGATATATACTATGATGCTA 2371
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 2324 AGGAAAAAGCTGAAATGAAGAAGAAAATGCTAAAGCTGATTGATATATACTATGATGCTC 2383
Query 2372 TTGATGCACCAAA-AACGGGGACTGAGGTCAATCTCCCGTTA-GA-CGTAAAGGTC-GAT 2427
||||||||||||| || ||||| | ||||| |||| || | || | | | || | ||
Sbjct 2384 TTGATGCACCAAAGAAAGGGGA-TAAGGTCTATCTTCCAA-ACGAGC-TGA-GGCCCGA- 2438
Query 2428 CTT-TTTCCACATTATATGGAGAGGAATAAAACA-TTCAAGTCCACTTCTATTCTTGGAT 2485
| | ||||||||||| |||||| || | |||| | |||||||||||||||||||||||||
Sbjct 2439 CATCTTTCCACATTACATGGAGCGGGAGAAAA-AGTTCAAGTCCACTTCTATTCTTGGAT 2497
Query 2486 TAATCTTTGACACTGTGGATTTTCATA-ATGCAGAGGACACC-ACACCATC-TG-GA-AT 2540
|||||| |||| ||| | | || | | ||||||| ||| |||||||| | || ||
Sbjct 2498 TAATCTATGACTTTGTTAAATCACAGACAA-CAGAGGA-ACCCACACCATCATCTGAGAT 2555
Query 2541 CAGTAAACTTCAGTGTTTTGAAGATGAGCCGGTCTCTGAGTTTGACATGGAGAAATGTAA 2600
||||||||| | ||||| ||||||||||||||||| |||||| | |||||||||||||
Sbjct 2556 CAGTAAACTCCCCTGTTTCGAAGATGAGCCGGTCTCAGAGTTTCATATGGAGAAATGTAG 2615
Query 2601 ACTCTGGCACAAGGATTACAGAAAGGAGATGTGTCAAGCGATGAACTCAGATGATGATGA 2660
|| ||| | | ||||||||| |||||| || |||||||| | ||| | |||||
Sbjct 2616 ACGGTGGTATGATAATTACAGAACTGAGATGACCCAGGCGATGAAAACTGATAAGGATGA 2675
Query 2661 TTCCTGT-AATGAAGTTATCCAGAAATACAAGCAGGAGTTCTACAGTGCTGCAGGGTTTA 2719
|| | ||||||||||| |||| |||||||||||||||||| ||||||||||||||
Sbjct 2676 ATCA-GCCAATGAAGTTATTCAGAGATACAAGCAGGAGTTCTATGGTGCTGCAGGGTTTG 2734
Query 2720 AAGAAAGCAAGAAAATTCTAGAAGAACTCTA-CC-CAAAGGCCCTTGCACTTTACAA 2774
|||| |||||||||| ||| ||||||||||| || ||| | |||| ||||| |||||
Sbjct 2735 AAGACAGCAAGAAAAGTCTGGAAGAACTCTATCCGCAA-G-CCCTCGCACTGTACAA 2789
> Ahg931400 jgi|Araly1|931400|scaffold_303857.1
Length=2845
Score = 756 bits (409), Expect = 0.0
Identities = 752/914 (82%), Gaps = 38/914 (4%)
Strand=Plus/Plus
Query 1890 AGTTTACAGGAATCCTGGACTACATTTTGGAGACATACATATTCTAAAGGCTACATATGT 1949
||||||||||||||||||| ||||||||||||| |||||| | || ||||||||||||||
Sbjct 1769 AGTTTACAGGAATCCTGGATTACATTTTGGAGATATACATGTGCTTAAGGCTACATATGT 1828
Query 1950 TAAATCCTTGGAACAGTATGTTGGAAATTCCAAGTATGGTGTGTTCTTCCCTCAAAAAGG 2009
||| |||| ||| | ||||| |||||||||||||||| ||||||||||||||| |||||
Sbjct 1829 TAAGGCCTTAGAAGACTATGTCGGAAATTCCAAGTATGCTGTGTTCTTCCCTCAGAAAGG 1888
Query 2010 TCCAAGATCTTTGGGAGACGAAATTGCAGGTGGTGACTTTGATGGCGATATGTATTTCAT 2069
||| ||||| ||||| || || ||||||||||||||||||||||||||||||||||||||
Sbjct 1889 TCCGAGATCCTTGGGTGATGAGATTGCAGGTGGTGACTTTGATGGCGATATGTATTTCAT 1948
Query 2070 ATCCAGAAATCCCAAGCTACTTGAGCACTACAAGCCAAGTGAACCGTGGGTGAGTTCTTC 2129
||||||||||||||||||||| || ||| ||||||||||||||| ||||||||||||||
Sbjct 1949 ATCCAGAAATCCCAAGCTACTGGAATACTTCAAGCCAAGTGAACCATGGGTGAGTTCTTC 2008
Query 2130 TCCACGTAGTAAAATTTACACTGGTAGACAA-CCAAGTGAACTTTCACCCGAACAGTTGG 2188
| || ||||||||||||| |||| ||| || ||||||||||| ||| ||| ||||||
Sbjct 2009 TAAACCTAGTAAAATTTACTCTGGAAGA-AAGCCAAGTGAACTATCAGAAGAAGAGTTGG 2067
Query 2189 AAGAAGAGCTTTTCAAAATCTTCTTAAA-GACAGGATTTAGTCCCAGCT-CAGTTATAGG 2246
||||||||||||||||||| |||||||| | || ||||| |||| ||| | ||||||||
Sbjct 2068 AAGAAGAGCTTTTCAAAATGTTCTTAAATG-CAAGATTTCGTCCGAGCGAC-GTTATAGG 2125
Query 2247 -ACAGGCTGCAGATAGCTGGCTAGCAATAATGGACCGGT-TCCTCACCTTAGGAGATGAG 2304
| |||||||||| ||||||||| ||||||||||| | ||||||||||||||| ||||
Sbjct 2126 GAT-GGCTGCAGATTGCTGGCTAGGAATAATGGACCC-TCTCCTCACCTTAGGAGCTGAG 2183
Query 2305 AATGTTAAGGAAAAAGCTGAAATGAAGAAGAAAATGCTAAAGTTGACTGATATATACTAT 2364
| || ||||||||| ||||| ||| ||||| || || ||||||| ||||||||| |||
Sbjct 2184 AGTGCGAAGGAAAAATATGAAAGGAACAAGAATATTCTTAAGTTGATTGATATATATTAT 2243
Query 2365 GATGCTATTGATGCACCAAAAACGGGGACTGAGGTCAATCTCCCGTTAGACGTAAAGGTC 2424
|||||| ||||||||||||||| |||| || ||||| ||||||| ||| || || ||
Sbjct 2244 GATGCTCTTGATGCACCAAAAAAGGGGGCTAAGGTCGATCTCCCACCCGACCTAGAGATC 2303
Query 2425 GATCTTTTTCCACATTATATGGAGAG-GAA--TAA-A-ACATT-CAAGTCCACTTCTATT 2478
| |||||||||||| |||||| | || ||| | | ||| || ||| |||||||||
Sbjct 2304 AAAAATTTTCCACATTACATGGAGCGTGACCCTAAGAGAGATTTCAGGTCGACTTCTATT 2363
Query 2479 CTTGGATTAATCTTTGACACTGTGGATTTTCATAATGCAGAGGACACCAC-ACCATCTGG 2537
||||||||||||||||||||||| |||| || ||||||||||| ||| | ||||||||
Sbjct 2364 CTTGGATTAATCTTTGACACTGTAGATTCCCAGAATGCAGAGGA-ACCCCCACCATCTGA 2422
Query 2538 AATCAGTAAACTTCAG-TGTTTTGAAGATGAGCCGGTCTCTGAGTTTGACATGGAGAAAT 2596
|||||||||||| | | | |||||||||||| |||||| || ||| | ||||||| ||||
Sbjct 2423 AATCAGTAAACT-CTGGTATTTTGAAGATGAACCGGTCCCTAAGTCTCACATGGATAAAT 2481
Query 2597 GTAAACTC-TGGCACAAGGATTACAGAAAGGAGATGTGTCAAGCGATG-A--ACTCAGAT 2652
|| | || ||| || || |||||||| || |||| ||||||||| | | | |||
Sbjct 2482 TTACA-TCCTGGTACGAGAATTACAGAGCTGAAATGTCCCAAGCGATGGAGGAAACTGAT 2540
Query 2653 GA--T---GATGATTCC-T--GT-AATGAAGTTATCCAGAAATACAAGCAGGAGTTCTAC 2703
| | || || | | | |||||||||||||||| |||||||||||| |||||
Sbjct 2541 AAGGTTAAGAAGAAGCAATTAGCCAATGAAGTTATCCAGAGATACAAGCAGGATTTCTAT 2600
Query 2704 AGTGCTGCAGGGTTTAAAGAAAGCAAGAAAATTCTAGAAGAACTCTACCCA-AAGGCCCT 2762
| |||||| ||||| |||| ||||| |||| ||| |||||||||||||| ||| || |
Sbjct 2601 GGCGCTGCAAGGTTTGAAGACAGCAACAAAAGTCTGGAAGAACTCTACCCCCAAG-CC-T 2658
Query 2763 TG-CACTTTACAAC 2775
|| |||| ||||||
Sbjct 2659 TGGCACTCTACAAC 2672
Score = 737 bits (399), Expect = 0.0
Identities = 724/870 (83%), Gaps = 66/870 (8%)
Strand=Plus/Plus
Query 29 GCAGCGATCAAGGTTT-TTCGTGGTCAGAAATTGCTCTTCTGGGTAGTGTTGAAACAATG 87
|||||||| || |||| | || || |||| || ||||||||||||||||||||||| |||
Sbjct 34 GCAGCGATGAA-GTTTCTCCGCGGACAGAGATCGCTCTTCTGGGTAGTGTTGAAACCATG 92
Query 88 TTGGAGAAAGTCTACGGGAAACACAATCATCATCCTCCGATAAAAGTGGAGACAAGACGG 147
||||||||| |||||| ||||||||| || |||| ||||||||||||||||||||| |||
Sbjct 93 TTGGAGAAAATCTACGAGAAACACAAGCAGCATCGTCCGATAAAAGTGGAGACAAGGCGG 152
Query 148 AGACTTTCTTCGATTTCTGAGGAATTGGCTTTGGAAACACTCAGGAAAGTTCTCAATATG 207
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 153 AGACTTTCTTCGATTTCTGAGGAATTGGCTTTGGAAACACTCAGGAAAGTTTTCAACATG 212
Query 208 CCGAATGTGAAGACCCTCGATGGGATAATCATATATTTTCTTAACGATGCGGTCACCGTT 267
||| |||||||||||||||||||||||||||| |||||| ||||| |||||| ||| |||
Sbjct 213 CCGTATGTGAAGACCCTCGATGGGATAATCATGTATTTTGTTAACAATGCGGCCACTGTT 272
Query 268 GATGGCTCTCCTCGCCTGTGGTCTGGCGAGTCTCCAGTACAGTTTCCTAGAACTCCCGGG 327
||||||||| ||| || || ||| || | | ||||||||| |||
Sbjct 273 GATGGCTCT--TCG---GT--TC-----AGT-----GT-C-----C-TAGAACTCCTGGG 308
Query 328 aaaaaaaGTTGCAGGGCTTCT-CAAGCAGAGGTGTCTCTTGATCGTG-AAGA-TCCGTCT 384
||||||||||||||| ||| | |||| | | ||||| ||||| || || | ||| |||
Sbjct 309 AAAAAAAGTTGCAGG-CTTTTTCAAG-AT-G-TGTCTATTGATT-TGGAA-ACTCCATCT 362
Query 385 CCTAAGTTCTTGAGAGGAGATGAAAATGGAG-A--ATCTAAGCACATTTCTCTTCTATTA 441
||||||||||||||| |||| |||||||||| | ||||||||||||| ||| ||||||
Sbjct 363 CCTAAGTTCTTGAGAAGAGAAGAAAATGGAGGATCATCTAAGCACATTCCTCCGCTATTA 422
Query 442 GCT-TTGGGTGAACTTGAATTCAAGAAGGCGTTTT-TGTTGCTTACCTATCTTGGAGGGA 499
||| |||| ||||||||||||||| ||||| |||| ||||||||| |||| ||||||||
Sbjct 423 GCTCTTGG-TGAACTTGAATTCAACAAGGC-TTTTCTGTTGCTTAGCTATATTGGAGGGG 480
Query 500 AATCTCTGGGTGAGG---TTATATCTGGTGATGAGATCAGACAATGGAAGGATTTGCCAA 556
|||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 481 AATCCCTGGTTGAGGAGGTTATATCTGGTGATGAGATCAGAAAATGGAAGGATTTGCCAA 540
Query 557 TGGTTGCATATGAA--AGAGCAGTGT----GGTTC--A-AG--TTGG-G-CCA--AAACG 601
|||||| ||||||| |||| || |||| | || || | || ||| |
Sbjct 541 TGGTTGAATATGAAGCAGAGGTTTGGAACCGGTTGGGACAGCGTTATTGTCCCCCAAAGG 600
Query 602 AG-GAAAGAATG-CAGCTTGAATCGGATAGCGGGAAGACTCATTACTATCAATGTCATGT 659
|| ||| ||| | || |||||| |||||| |||||||||||||||||||||||||||||
Sbjct 601 AGCGAA-GAAGGTCA-CTTGAAGGGGATAGTGGGAAGACTCATTACTATCAATGTCATGT 658
Query 660 TGCTCCCGATGGTAGCTACAGATTAAAGGGTTATTTTCTGGAGAACACTGGAACACACCT 719
||||||||||||||| |||| ||| ||||||||| |||||||| ||||||||||||||||
Sbjct 659 TGCTCCCGATGGTAGTTACAAATTCAAGGGTTATCTTCTGGAGGACACTGGAACACACCT 718
Query 720 GCACAAGGTTTTGGGTGATGATAATGTTTTAACCGTTAGATTCGATCAATTACCAAAG-G 778
|||||||||||||||||||||||| ||||||||||| | ||||||| || | | | |
Sbjct 719 GCACAAGGTTTTGGGTGATGATAACGTTTTAACCGTCAAATTCGATAAAGTGTTAG-GCG 777
Query 779 AGTCAACATACTGTGACAACCCTTACTCTAAATACAAAGAGATTGCTAAGAATGGTATCA 838
|| ||| || ||| | ||| |||||||| |||||||| ||||||||||||||||||||
Sbjct 778 AGGAAACCTATTGTAATGACCTTTACTCTACATACAAAGGGATTGCTAAGAATGGTATCA 837
Query 839 TGGTTGGTTTACGTCGTTATCAATTTTTTG 868
||||||| ||||| ||||||| ||||||||
Sbjct 838 TGGTTGGGTTACGCCGTTATCGATTTTTTG 867
Score = 719 bits (389), Expect = 0.0
Identities = 682/816 (84%), Gaps = 49/816 (6%)
Strand=Plus/Plus
Query 871 TTCAAAGATGGAGGGAAAGCAGAGAAAAAGAAGAGA-AATTCTACAAAGCAAGTGAAATG 929
||||||||||||||||||| |||||| ||||| ||| | |||||||| |||||||||
Sbjct 966 TTCAAAGATGGAGGGAAAGAAGAGAAGAAGAA-AGACGCTGCTACAAAGGGAGTGAAATG 1024
Query 930 CTACTTCATACGCACGGGTTCTACAGCATCCAGTGATATG-GAGAATCCTTATATCCTT- 987
|||||| |||||||| | || ||||| || | ||||||| || || || ||||| |||
Sbjct 1025 CTACTTTATACGCACAGACTCGACAGCTTCAAATGATATGCGA-AACCCCTATAT-CTTC 1082
Query 988 TCCGGGATGTCAATTCATGAAGCTCGTATGCATTTTATGCATGTGCATACATTGCCTTC- 1046
||||| | |||||| |||||||| ||||||||||||||||||||| |||| ||| | ||
Sbjct 1083 TCCGGAAAGTCAATGCATGAAGCGCGTATGCATTTTATGCATGTGAATACTTTGTCATCT 1142
Query 1047 TCCCGCCAACTATATGGCAAGGTTTTCTTTAATTCTGTCAAAGACAAAAAAGCTTGAAGT 1106
| | |||||||||||||||||||||||||||||||||||||||| |||| ||| |||||
Sbjct 1143 TTGC-CCAACTATATGGCAAGGTTTTCTTTAATTCTGTCAAAGACTAAAACGCTCGAAGT 1201
Query 1107 TGACATGACTGAGATTACCGTC-ATGCAAATCGATGATATACACTGCCATGATCAAAG-T 1164
||||||||||| ||||||| || | |||||| |||||||||||||||||||||| ||| |
Sbjct 1202 TGACATGACTGGGATTACCTTCGA-GCAAATTGATGATATACACTGCCATGATC-AAGAT 1259
Query 1165 AATAATGATGTTCTTGATAAGAATGGGAAACCTCGTATACACTCAGATGGAACTGGATAC 1224
||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||| |||
Sbjct 1260 AATAAGGATGTTCTTGACAAGAATGGGAAACCTTGTATACATTCAGATGGAACTGGCTAC 1319
Query 1225 ATCTCTGAGGACCTTGCTCGGATGTGTCCA-TTAAATATTTTTAAAGGGAAATCTATGAG 1283
|||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct 1320 ATCTCTGAGGACCTTGCTCGAATGTGTCCAGTT-AATATTTTTAAAGGGAAATCTATGAG 1378
Query 1284 AAGT----A-A--CA-A-T---ATT-C----A--G--GG--A---ACC-TGTGTCCAAGA 1316
|||| | | || | | ||| | | | || | ||| |||| ||||||
Sbjct 1379 AAGTAACAATATTCAGAGTAAGATTCCAAATATTGAAGGACAGGGACCATGTGGCCAAGA 1438
Query 1317 GCCGCCTCTGCTGATCCAAATTCGGATGTTTAATGATGGCTCTGCTGTTAAGGGAA-TTT 1375
|||||||||||||||||| ||||||||||| || |||||| |||||||||||||| |||
Sbjct 1439 GCCGCCTCTGCTGATCCAGTTTCGGATGTTTCATAATGGCTATGCTGTTAAGGGAACTTT 1498
Query 1376 TCCT-ATTAAACAAGAACCTTCCTCCACAGACCGTCCAGGTTCGACCTTCTATGATCAAG 1434
| || | ||||||||| |||||||| ||| ||||||||||| |||||||||||||||
Sbjct 1499 T-CTCA-CAAACAAGAAACTTCCTCCTTGGACTGTCCAGGTTCGGCCTTCTATGATCAAG 1556
Query 1435 GTGTATAAAGATAAAAATTTGTCAAATTTTAGCACGTTTAACTCCCTGGAGGTAGTCACT 1494
||| || ||||| ||| ||||||||||||| || ||||||||||||||||||||||||
Sbjct 1557 GTGAATGAAGATCAAACCATGTCAAATTTTAGTACCTTTAACTCCCTGGAGGTAGTCACT 1616
Query 1495 ACAAGTAATCCACCAA-AAAGAGCGAAGCTATCGAAGAA-TTTAGTCGCGCTGCTGAGCT 1552
|||||||||||||||| ||| |||| |||||| ||||| ||| ||||| ||||| || |
Sbjct 1617 ACAAGTAATCCACCAAGAAAT-GCGAGGCTATC-AAGAAATTTGGTCGCTCTGCTTAGTT 1674
Query 1553 ATGGAGGAGTGCCAAATGATTTCTTTTTGGATATATTGCTCAACACGTTGGAAAAGAAGA 1612
|||||||||| || ||||| ||||||||| ||||| ||| ||||| |||||| || |
Sbjct 1675 ATGGAGGAGTCCCTAATGACTTCTTTTTGAATATACTGCGGAACACATTGGAAGAGTCCA 1734
Query 1613 AAACCATATTCTTCAAAGTACGTGCAGCGGGTAAAG 1648
|||||||||||| || | |||||| ||| |||||
Sbjct 1735 AAACCATATTCTACAGCGAACGTGCTGCGTTTAAAG 1770
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105052895710
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5