BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G20650.1
Length=2189
Score E
Sequences producing significant alignments: (Bits) Value
Ahg480900 jgi|Araly1|480900|fgenesh2_kg.3__3601__AT2G20650.1 3384 0.0
Ahg945197 jgi|Araly1|945197|scaffold_701426.1 1598 0.0
> Ahg480900 jgi|Araly1|480900|fgenesh2_kg.3__3601__AT2G20650.1
Length=2159
Score = 3384 bits (1832), Expect = 0.0
Identities = 2012/2098 (96%), Gaps = 16/2098 (1%)
Strand=Plus/Plus
Query 1 TTCCAAGTTTCCACCTTTGTTCTCTCCAAACATATATTATACTAATAGATTAGAGAAGAA 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 1 TTCCAAGTTTCCACCTTTGTTCTCTCCAAACATATATTATACTAATAGACTAGAGAACAA 60
Query 61 CTCTATAAAGTTTTTAACTTTCTCCCCAAAC----GAG---GAATCTCAAAGTCAATTGC 113
| |||||||||||||||||||||| |||| ||| |||||||||||||||||||
Sbjct 61 GGCCATAAAGTTTTTAACTTTCTCCCAAAACGAGAGAGAAAGAATCTCAAAGTCAATTGC 120
Query 114 TGTTCTGTGATTCCAGAGTGTTTGTTTCTCTGTCATAATCTCTTCTAGTTGCGGTTTGTT 173
|||||| ||||| |||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 121 TGTTCTATGATTACAGA--GTTTGTTTCTCTGTCATAATCTCTTCTAGTTGTGGTTTGTT 178
Query 174 GGGCTCTCACTTTCTCTTTCAGCCGATTTGATCTTTCGTTTCTTGTGGTTTGACTTCACT 233
||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||
Sbjct 179 GGGCTCTCACTTTCTCTTTTAGCCGATTTGATC-TTCGTTTCTTGT-GTTTGACTTCACT 236
Query 234 TGAAGCAAGCTCTTTTATTGATCTTATTGTCTCCTTTATGTTCTGATGATTCCGCATTGT 293
| |||||| || ||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct 237 TAAAGCAACCTTTTTTATTGATCTTCTTGTCTCCTTTATGTTCTGATGAATCGGCATTGT 296
Query 294 GAAATCACTA-GAGATTTTGGGGTTGTGATATGAATAATCTGGGGAATTTTGGGGTTTGG 352
|||| ||| | |||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 297 GAAACCAC-ACGAGATTTT-GGGTTGTGATATGAATAATCTGGGGAATTTCGGGGTTTGG 354
Query 353 GGATTCGGGTTCTTCTCCTTATCTATTTGGTTTGCGGTTCTGCAACAAGCTAATGGACTC 412
||||| ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct 355 GGATTAGGGTTCTTCTCCTTAGCGATTTGGTTTGCGGTTTTGCAACAAGCTAATGGACTC 414
Query 413 AGACCCATAAGGGAGACTGCTCGGTCCTGGGGCGATGAGTGGCTCTTTGGCaaaaaagaa 472
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 415 AGACCCATTAGGGAGACTGCTCGATCCTGGGGCGATGAGTGGCTCTTTGGCAAAAAAGAA 474
Query 473 aaaGGTGGAGCAGGACCGTTTTCTGCGTGGAATATAACAGGAACATATAGAGGCACATGG 532
||| | ||||||||||||||||| || ||||| ||||||||||||||||||||| |||||
Sbjct 475 AAAAGCGGAGCAGGACCGTTTTCCGCATGGAACATAACAGGAACATATAGAGGCTCATGG 534
Query 533 AAGTTTCTAGATACTGTAAATAGCTCTTCAAAGTTTCCAGATTTCAGAAAAGAAAGTGGT 592
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 535 AACTTTCTAGATACTGTAAATAGCTCTTCAAAGTTCCCAGATTTCAGAAAAGAAAGTGGT 594
Query 593 AACTCTGTCATTGAGTTAGTGACAAGTCCAACAAAAATTACTGGTGTGCATTATGTTCAG 652
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 595 AACTCTGTCATTGAGTTAGTGACAAGTCCAACAAAAATAACTGGTGTGCATTATGTTCAG 654
Query 653 GGTGCAGTTGTTTTCCATGACGTATTTGACAATGAACACAATGTGGGTGGTGCCCAAATT 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 655 GGTGCAGTTGTTTTCCATGACGTATTTGACAATGAACACAATGTGGGTGGTGCCCAAATT 714
Query 713 AAAGTTGAAGGTGTATATATTTGGCCCTTTAGACAGCTCCGTCTTGTTGCTAACAGCGGA 772
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 715 AAAGTTGAAGGTGTATATATTTGGCCCTTTAGACAGCTCCGTCTTGTTGCTAACAGTGGA 774
Query 773 AAGAAGAGTGATTCAGGACTAGAAGACGATTATCTTCTCTCCAACCCCTATCATCTGCTC 832
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 775 AAGAAGGGTGATTCAGGACTAGAAGACGATTATCTTCTCTCCAACCCCTATCATCTGCTC 834
Query 833 GGTATTTTTTCCTCCCAAGTATTTCAAGAATCTCCAAGAGACAGAATATTGAAACAGAAA 892
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 GGAATTTTTTCCTCCCAAGTATTTCAAGAATCTCCAAGAGACAGAATATTGAAACAGAAA 894
Query 893 ACTTCTCCAATATATGAGATGGAGAAGCACTGCAATATCGAAATAGCTGCCCAAATATCC 952
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 895 ACTTCTCCAATATATGAGATGGAGAAGCACTGCAATATCGAAATAGCAGCCCAAATATCC 954
Query 953 CAAAGCACTTCTAGTGAAAACAATGGGGACAAAGATCGTTATCAAATTGAAGGATTGATG 1012
|||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 955 CAAAGCGCTTCTAGTGAAAACAATGGGGACAAAGATCGTTATCATATCGAAGGATTGATG 1014
Query 1013 GAAAGTCCTGCAGTAGATGATGAAGTAGATTGTTTTTCGCCATTGTCGCTGAATGCAACC 1072
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 1015 GAAAGTCCTGCAGTAGATGATGACGGAGATTGTTTTTCGCCATTGTCGCTGAATGCAACC 1074
Query 1073 TCCATAAACGTCGAAGTCTACTATAACAAGGCTGTGAACTATACATTGATGGTCACTTTT 1132
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1075 TCCATAAACGTTGAAGTCTACTATAACAAAGCTGTGAACTATACATTGATGGTCACTTTT 1134
Query 1133 GTCTCGTTCCTCCAGGTTCTTTTATTGATCCGGCAAATGGAGCACAGTAACACACAATCC 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1135 GTCTCGTTCCTCCAGGTTCTTTTATTGATCCGGCAAATGGAGCACAGTAACACACAATCC 1194
Query 1193 GGTGCCGCAAAGGTCTCTATAGTAATGATCGGGCAACAAGCCATCATGGATTCTTATTTA 1252
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 GGTGCTGCAAAGGTCTCTATAGTAATGATCGGGCAACAAGCCATCATGGATTCTTATTTA 1254
Query 1253 TGCCTTTTACATCTCACAGCTGGGATTTTAGTTGAATCCCTGTTTAACGCTTTTGCAACA 1312
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1255 TGCCTTTTACATCTCACAGCTGGGATTTTAGTTGAATCCCTTTTTAACGCTTTTGCAACA 1314
Query 1313 GCTGCGTTCTTCAAATTTGTAGTGTTTTCGATATTTGAGATGAGATATCTTCTGTCCATA 1372
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1315 GCTGCGTTCTTCAAATTTGTCGTGTTTTCGATATTTGAGATGAGATATCTTCTGTCCATA 1374
Query 1373 TGGAAAGCGACCAGGCCTTCAACCAGCGGTGAGGGCTGGGAAACAATGAGGCGTGAGCTC 1432
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1375 TGGAAAGCAACCCGGCCTTCAACCAGCGGTGAGGGCTGGGAAACAATGAGGCGTGAGCTC 1434
Query 1433 TCCTTTTTGTACAGCCGTTTCTATGGAATCCTTCTTGGAGGCATATT-ATTAATGTACGA 1491
|||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 1435 TCCTTTCTGTACAGCCGTTTCTATGGAATCCTTCTTGGAGGCATATTGAT-AATGTACGA 1493
Query 1492 GTTCCACAACTACATGCGGCCGATCCTCCTACTCATGTACTCATTTTGGATTCCCCAGAT 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1494 GTTCCACAACTACATGCGGCCGATCCTCCTACTCATGTACTCATTTTGGATTCCCCAGAT 1553
Query 1552 AGTTGCAAACGTTGTTCGTGATTCTCGAAAGCCTCTGCACCCATATTATATACTAGGGAT 1611
||||||||||||||||||||||||||||||||||||||| || |||||||| || |||||
Sbjct 1554 AGTTGCAAACGTTGTTCGTGATTCTCGAAAGCCTCTGCATCCTTATTATATCCTGGGGAT 1613
Query 1612 GACTGTTACACGACTTGCTATACCGTTGTATGTTTTTGGTTGCCCGAAGAACTTCATGCG 1671
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1614 GACTGTTACACGACTTGCTATACCATTGTATGTTTTTGGTTGCCCGAAGAACTTCATGCG 1673
Query 1672 TGTAGAGCCCAGCAAGGCCTGGTGTGTAAGCCTGTGTGCATTCATGGGGTTTCAAGCTGG 1731
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1674 TGTAGAGCCCAGCAAGGCCTGGTGTGTAAGCCTGTGCGCATTCATGGGGTTTCAAGCTGC 1733
Query 1732 TGTTCTTCTTCTTCAGCATTATTTCGGGTCTCGTTGCTTTGTCCCTCGAAAGTTGCTACC 1791
||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||
Sbjct 1734 TGTTCTTCTACTTCAGCATTATTTCGGGTCTCGTTGCTTTGTCCCTCGGAAGATGCTCCC 1793
Query 1792 TGAGAAATACAGCTACTACAGAAGACTCGATCATAATGTAAACCGAAGCAGGGACTGCGT 1851
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 1794 TGAGAAATACAGCTACTACAGAAGATTGGATCATAATGTAAACCGAAGCAGGGACTGCGT 1853
Query 1852 AATCTGCATGACCACGATTGATCTCAGACACCGTATTAATGATTGCATGGTAACGCCGTG 1911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1854 AATCTGCATGACCACGATTGATCTCAGACACCGTATTAATGATTGCATGGTAACGCCGTG 1913
Query 1912 TGAGCATATATTCCACTCGGGATGCTTACAGAGATGGATGGATATAAAGATGGAGTGCCC 1971
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1914 TGAGCATATATTCCACTCGGGTTGCTTACAGAGATGGATGGATATAAAGATGGAGTGCCC 1973
Query 1972 AACATGTCGTCGCCCACTTCCTCCAGCTTAACCTTTGGTTCCTTAGGAATCGTCTATTAA 2031
||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||
Sbjct 1974 AACATGTCGTCGCCCACTTCCTCCAGCTTAAGCTTTGGTTCCCTCGGAATCGTCTATTAA 2033
Query 2032 CTGCACTCACATTTTATTGTCTTGGAAAGATATTAGATGAAAACAGAGCATAGATAGA 2089
|||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2034 CTGCACCCACATTTAATTGGCTTGGAAAGATATTAGATGAAAACAGAGCATAGATAGA 2091
> Ahg945197 jgi|Araly1|945197|scaffold_701426.1
Length=1727
Score = 1598 bits (865), Expect = 0.0
Identities = 1396/1653 (84%), Gaps = 34/1653 (2%)
Strand=Plus/Plus
Query 363 TCTTCTCCTTATCTATTTGGTTTGCG-GTTCTGCAACAAGCTAAT-GGACTCAGACCCAT 420
|||||| ||||| |||||||| ||| ||| ||||||||| | ||| | ||||||||
Sbjct 68 TCTTCTGGTTATCGATTTGGTTGGCGATTTC-GCAACAAGC-GCTGGGATTGAGACCCAT 125
Query 421 AAGGGAGACTGCTCGGTCCTGGGGCGATGAGTGGCTCTTTGGCaaaaaagaaaaaGGTGG 480
|||||||| |||| || ||| | || |||||||||||||| | ||| || ||| ||
Sbjct 126 AAGGGAGAAAACTCGATCATGGAGTGACGAGTGGCTCTTTGGTAGGAAACAAGAAGCTGA 185
Query 481 AGCAGGACCGTTTTCTGCGTGGAATATAACAGGAACATATAGAGGCACATGGAAGTTTCT 540
|| ||||||||||||||| ||||||||||||||||| |||||||| || |||||||||||
Sbjct 186 AGTAGGACCGTTTTCTGCATGGAATATAACAGGAACGTATAGAGGAACTTGGAAGTTTCT 245
Query 541 AG-ATACTGTAAATAGCTCTTCAAAGTTTCCAGA-TTTCAGAAAAGAAAGTGGTAACTCT 598
| || | || ||||||||||| ||||||| ||| ||||| |||||||| |||||| |||
Sbjct 246 -GAATTCCGTCAATAGCTCTTCGAAGTTTCAAGACTTTCA-AAAAGAAAATGGTAATTCT 303
Query 599 GTCATTGAGTTAGTGACAAG-TCCAACAAAAATTACTGGTGTGCATTATGTTCAGGGTGC 657
|| ||||||||||| | || ||| ||||| || || ||||||||||||||||||||||
Sbjct 304 GTGGTTGAGTTAGTGGC-AGTTCCTACAAAGATAACCGGTGTGCATTATGTTCAGGGTGT 362
Query 658 AGTTGTTTTCCATGACGTATTTGACAATGAACACAATGTGGGTGGTGCCCAAATTAAAGT 717
||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
Sbjct 363 AGTTGTTTTCCATGACGTATTTGACAATGAACAAAATGTGGGTGGTGCCCAAA-TAAA-T 420
Query 718 -T-GAAGGTGTATATATTTGGCCCTTTAGACAGCTCCGTCTTGTTGCTAACAGCGGAAAG 775
| |||||||||||||| |||||||||||||| ||||| ||||| ||||||||||| |||
Sbjct 421 CTGGAAGGTGTATATATATGGCCCTTTAGACAACTCCGCCTTGTGGCTAACAGCGGCAAG 480
Query 776 AAGAGTGATTCAGGACTAGAAGACGATTATCTTCTCTCCAACCCCTATCATCTGCTCGGT 835
||||||||||||| | ||||||| || |||||||||| || |||||||||||||| ||
Sbjct 481 GAGAGTGATTCAGGGCAAGAAGACAATAATCTTCTCTCAAATCCCTATCATCTGCTTGGA 540
Query 836 ATTTTTTCCTCCCAAGTATTTCAAGAATCTCCAAGAGACAGAATATTGAAACAGAAAAC- 894
||||| ||||| ||||| |||||||||||||||||||||||| || |||||| | ||||
Sbjct 541 ATTTTCTCCTCTCAAGTGTTTCAAGAATCTCCAAGAGACAGATTACTGAAAC-GGAAACT 599
Query 895 TTCTCCAATATATGAGATGGAGAAGCACTGCAATATCGAAATAGCTGCCCAAATATCCCA 954
||||||| || |||| |||||||||||||| || ||||||||||| || ||| ||||||
Sbjct 600 TTCTCCAGTAAATGAAATGGAGAAGCACTGTAACATCGAAATAGCAGCTCAAGTATCCC- 658
Query 955 AAG-CACTTCTAGTGAAAACAATGGGGACAAAGATCGTTATCAAATTGAAGGATTGATGG 1013
| ||||| ||||||| ||||| |||||| || |||||| || |||||||||||||
Sbjct 659 GCGTGGCTTCTGGTGAAAATAATGGAGACAAAAATTATTATCACATGGAAGGATTGATGG 718
Query 1014 AAAGTCCTGCAGTAGATGATGAAGTAGATTGTTTTTCGCCATTGTCGCTGAATGCAACCT 1073
||||||||| |||| ||||| | |||||||||||| || |||| ||||||||||| |
Sbjct 719 AAAGTCCTGGGGTAGGCGATGACGGAGATTGTTTTTCCCCTTTGTTACTGAATGCAACTT 778
Query 1074 CCATAAACGTCGAAGTCTACTATAACAAGGCTGTGAACTATACATTGATGGTCACTTTTG 1133
| |||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct 779 CTGTAAATGTCGAAGTCTACTATAACAAAGCTGTGAACTATACACTGATGGTCACTTTTA 838
Query 1134 TCTCGTTCCTCCAGGTTCTTTTATTGATCCGGCAAATGGAGCACAGTAACACACAATCCG 1193
|||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
Sbjct 839 TCTCTTTCCTCCAGGTTCTTTTGTTGATCCGGCAAATGGAGCACGGTAACACACAATCTG 898
Query 1194 GTGCCGCAAAGGTCTCTATAGTAATGATCGGGCAACAAGCCATCATGGATTCTTATTTAT 1253
|||| || ||||| || || |||||||| ||||||||||| ||||||||| ||||||| |
Sbjct 899 GTGCTGCTAAGGTATCCATTGTAATGATTGGGCAACAAGCGATCATGGATGCTTATTTGT 958
Query 1254 GCCTTTTACATCTCACAGCTGGGATTTTAGTTGAATCCCTGTTTAACGCTTTTGCAACAG 1313
|||| |||||||||||||| || || ||||| ||||| |||||||| || |||||||| |
Sbjct 959 GCCTCTTACATCTCACAGCCGGTATATTAGTCGAATCTCTGTTTAATGCATTTGCAACCG 1018
Query 1314 CTGCGTTCTTCAAATTTGTAGTGTTTTCGATATTTGAGATGAGATATCTTCTGTCCATAT 1373
|||||||||||||||| ||||| || ||||| ||||||||||||||||||||| | ||||
Sbjct 1019 CTGCGTTCTTCAAATTCGTAGTCTTCTCGATTTTTGAGATGAGATATCTTCTGGCTATAT 1078
Query 1374 GGAAAGCGACCAGGCCTT-CAACCAGCGGTGAGGGCTGGGAAACAATGAGGCGTGAGCTC 1432
||||||| ||| | |||| ||| ||||| ||||| ||||||||||||||||| || ||
Sbjct 1079 GGAAAGCAACCCGTCCTTCCAA-TAGCGGAGAGGGTTGGGAAACAATGAGGCGAGAACTG 1137
Query 1433 TCCTTTTTGTACAGCCGTTTCTATGGAATCCTTCTTGGAGGCATATT-ATTAATGTACGA 1491
|||||| ||||||||||||||||||| ||||||||||||||||| || | |||||||| |
Sbjct 1138 TCCTTTCTGTACAGCCGTTTCTATGGGATCCTTCTTGGAGGCATTTTGA-TAATGTACCA 1196
Query 1492 GTTCCACAACTACATGCGGCCGATCCTCCTACTCATGTACTCATTTTGGATTCCCCAGAT 1551
||||||||||||||||| |||||| ||||| |||||||||||||||||||| || || ||
Sbjct 1197 GTTCCACAACTACATGCAGCCGATTCTCCTTCTCATGTACTCATTTTGGATACCACAAAT 1256
Query 1552 AGTTGCAAACGTTGTTCGTGATTCTCGAAAGCCTCTGCACCCATATTATATACTAGGG-A 1610
|||||| || || || || ||||| ||||||||||||| | |||||||| || ||| |
Sbjct 1257 AGTTGCCAATGTCGTCCGGGATTCAAGAAAGCCTCTGCATCTGTATTATAT-CTTGGGCA 1315
Query 1611 TGACTGTTACACGACTT-GCTATACCGTTGTATGTTTTTGGTTGCCCGA-AGAACTTCAT 1668
|||| | ||||| || ||||||||||| ||||||||||| ||||| | | ||||||||
Sbjct 1316 TGACAGCGACACG-GTTAGCTATACCGTTATATGTTTTTGGATGCCC-ACACAACTTCAT 1373
Query 1669 GCGTGTAGAGCCCAGCAAGGCCTGGTGTGTAAGCCTGTGTGCATTCATGGGGTTTCAAGC 1728
|||||||||||||| ||||| ||||||| || || |||| ||| |||||||| |||||
Sbjct 1374 GCGTGTAGAGCCCAACAAGGTCTGGTGTATATGCTTGTGCACATCCATGGGGTCGCAAGC 1433
Query 1729 TGGT-GTTCTTCTTCTTCAGCATTATTTCGGGTCTCGTTGCTTTG-TCCCTCGAAAGTTG 1786
| || |||||||||||||||||||||| || || || ||||||| |||| || || ||
Sbjct 1434 T-GTCATTCTTCTTCTTCAGCATTATTTTGGTTCACGCTGCTTTGTTCCC-CGTCAGATG 1491
Query 1787 CTACCTGAGAAATACAGCTACTACAGAAGACTCGATCATAATGTAAACCG-AAGCAGGGA 1845
||||| |||||||||| |||| || ||||| | ||| | |||| ||| || || ||
Sbjct 1492 CTACCAGAGAAATACAACTACCACCGAAGATTTAATCGGGACGTAAGCCGCAA-CACTGA 1550
Query 1846 CTGCGTAATCTGCATGACCACGATTGATCTCAGACACCGTATTAATGATTGCATGGTAAC 1905
||||| ||||||||||| | |||||||||||||| | || | ||||| |||| ||||
Sbjct 1551 TTGCGTTATCTGCATGACTGCTATTGATCTCAGACAGCATACCAGTGATTTCATGATAAC 1610
Query 1906 GCCGTGTGAGCATATATTCCACTCGGGATGCTTACAGAGATGGATGGATATAAAGATGGA 1965
|| ||||||||| | || ||||||||||||||||||||||||||||||||||| |||||
Sbjct 1611 TCCATGTGAGCATTTCTTTCACTCGGGATGCTTACAGAGATGGATGGATATAAAAATGGA 1670
Query 1966 GTGCCCAACATGTCGTCGCCCACTTCCTCCAGC 1998
||| ||||| ||||| || | |||||||||||
Sbjct 1671 GTGTCCAACTTGTCGGCGTTCTCTTCCTCCAGC 1703
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82389199935
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5