BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G21045.1 Length=731 Score E Sequences producing significant alignments: (Bits) Value Ahg899363 jgi|Araly1|899363|Al_scaffold_0004_13 654 0.0 > Ahg899363 jgi|Araly1|899363|Al_scaffold_0004_13 Length=423 Score = 654 bits (354), Expect = 0.0 Identities = 400/423 (95%), Gaps = 0/423 (0%) Strand=Plus/Plus Query 94 ATGGAGGAAACAAAACCAAAGACCGTTGAAGATGTTGAGACCGTTGATGTTTATACAGCT 153 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct 1 ATGGAGGAAACAAAACCAAAGACAGTTGAAGATGTTGAGACGGTTGATGTTTACACAGCT 60 Query 154 AAAGGCTTTCTTAGTACTGGTCACCGATATCTCGACGTAAGGACAAATGAAGAATTTGCC 213 ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| Sbjct 61 AAAGGTTTTCTTAGTACTGGTCATCGATATCTCGATGTAAGGACAAATGAAGAATTCGCC 120 Query 214 AAGAGTCATGTTGAGGAGGCTTTGAACATTCCTTATATGTTCAAAACAGATGAAGGTAGG 273 ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct 121 AAGAGTCATGTTGAGGATGCTTTGAACATTCCTTATATGTTCCAAACAGATGAAGGTAGG 180 Query 274 GTTATAAATCCTGATTTCCTTTCTCAAGTGGCATCGGTTTGCAAGAAAGATGAACATTTG 333 ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| || Sbjct 181 GTTATAAATCCTGATTTTCTTCCTCAAGTGGCATCGGTTTGCAAGAAAGATGAACATATG 240 Query 334 ATCGTGGCTTGTAACGCTGGAGGAAGAGGAAGTCGTGCTTGCGTTGATCTTCTTAACGAG 393 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || | | Sbjct 241 ATCGTGGCTTGTAACGCTGGAGGAAGAGGAAGTCGTGCTTGTGTTGATCTTCTCAATGCG 300 Query 394 GGGTACGACCATGTGGCTAACATGGGGGGAGGCTACTCGGCTTGGGTTGACGCTGGATTC 453 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 301 GGGTACGAGCATGTGGCTAACATGGGGGGAGGCTACTCGGCTTGGGTTGATGCTGGATTC 360 Query 454 GCCGGGGACAAACCCCCGGAAGACCTCAAGATTGCTTGCAAGTTCAGGCCAAAGGAAAAC 513 ||||| ||||||||||||||||| ||||||||||||||| ||||| | |||||||||||| Sbjct 361 GCCGGCGACAAACCCCCGGAAGAGCTCAAGATTGCTTGCCAGTTCCGACCAAAGGAAAAC 420 Query 514 TAA 516 ||| Sbjct 421 TAA 423 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26914779402 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5