BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G21540.1
Length=2106
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481021 jgi|Araly1|481021|fgenesh2_kg.4__81__AT2G21540.1 3099 0.0
Ahg943888 jgi|Araly1|943888|scaffold_700117.1 1020 0.0
> Ahg481021 jgi|Araly1|481021|fgenesh2_kg.4__81__AT2G21540.1
Length=2055
Score = 3099 bits (1678), Expect = 0.0
Identities = 1956/2084 (94%), Gaps = 43/2084 (2%)
Strand=Plus/Plus
Query 10 ttcttctccctacaaaaatggcttcttctctttctctttctcttACCAGGGACAAGTTAC 69
||||||||| ||||||||||||||||||||||||||| |||| | | |||||||||
Sbjct 1 TTCTTCTCCTTACAAAAATGGCTTCTTCTCTTTCTCTCTCTC-T--C--TTACAAGTTAC 55
Query 70 AATGTAAATAAAGGTCAAACCTTTTTTCCAA-TAAAACCCTTTTAATGGATTGTGCTAAA 128
|||| ||||||||||||| ||||||||| || |||||||||| |||||| ||||||
Sbjct 56 AATG----TAAAGGTCAAACC-TTTTTCCAATTAGAACCCTTTTATTGGATTAAGCTAAA 110
Query 129 A--------ctctctctctctTTGGATTTTCAAAACAAAGAAATCTTAAATCCAGACT-T 179
| |||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 111 ACTCTCTCTCTCTCTCTCTCTTTGGATTTTCAAAACAAAGAAAGCTTAAATCCAGACTAT 170
Query 180 TAACCATGACGGATACAATGTCTGCTCATATGGATCGACATAATAAGCTTGATTATGACG 239
|| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |
Sbjct 171 AAAGCATGACGGATACAATGTCTACTCATATGGATCGACATAATAAGCTAGATTATGATG 230
Query 240 GCTCAGAGGATGAAAAGAAAACAAAGCTTTGTTCCCTCAAGAAGAAAGCAATCAATGCCT 299
|||| |||||||||||||| ||||||||||||||| | ||||||||||||||||||||||
Sbjct 231 GCTCGGAGGATGAAAAGAAGACAAAGCTTTGTTCCTTGAAGAAGAAAGCAATCAATGCCT 290
Query 300 CCAACAAATTCAAACACTCCTTCACCAAGAGAACTCGAAGGAACAGCCGAGTCATGTCTG 359
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 291 CCAACAAATTCAAACACTCTTTCACCAAGAGAACTCGAAGGAACAGCCGAGTCATGTCTG 350
Query 360 TCTCTATTGTTGACGATATTGATCTTGAAGAGCTTCAAGCTGTTGACGCTTTCCGTCAAG 419
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 351 TCTCTATCGTTGACGACATTGATCTTGAAGAGCTTCAAGCTGTTGACGCTTTCCGTCAAG 410
Query 420 CTCTTATCCTAGACGAGCTTCTCCCTTCCAAACACGATGATCATCACATGATGCTGAGGT 479
|||||||| | |||||||| || ||||| |||||||||||||||||||||||||| ||||
Sbjct 411 CTCTTATCTTGGACGAGCTCCTTCCTTCGAAACACGATGATCATCACATGATGCTTAGGT 470
Query 480 TTCTGAGGGCAAGGAAGTTTGATCTTGAGAAAGCAAAGCAAATGTGGACTGATATGATCC 539
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 471 TTTTGAGGGCAAGGAAGTTTGATCTTGACAAAGCAAAGCAAATGTGGACTGATATGATCC 530
Query 540 ATTGGAGGAAAGAGTTTGGTGTTGACACAATCATGGAGGACTTTGATTTCAAGGAGATTG 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 531 ATTGGAGGAAAGAGTTTGGTGTTGACACAATCATGGAGGACTTTGATTTCAAGGAAATAG 590
Query 600 ATGAAGTCCTCAAGTACTACCCTCAAGGTTACCATGGTGTTGACAAAGATGGAAGGCCTG 659
| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 591 ACGAAGTCCTCAAGTACTATCCTCAAGGTTACCATGGTGTTGACAAAGAGGGAAGGCCTG 650
Query 660 TTTACATTGAGAGGCTAGGCCAAGTTGATGCCACAAAGCTGATGCAAGTCACTACCATCG 719
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 651 TTTACATAGAGAGGCTAGGCCAAGTGGATGCCACAAAGCTGATGCAAGTCACTACCATCG 710
Query 720 ATAGGTATGTCAAGTACCATGTGAGAGAGTTTGAGAAGACTTTCAATATCAAATTACCAG 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 711 ATAGGTATGTCAAGTACCATGTGAGAGAGTTTGAGAAGACTTTCAATATCAAATTACCAG 770
Query 780 CTTGTTCCATTGCTGCCAAGAAGCATATTGATCAGAGCACCACCATCTTGGATGTGCAAG 839
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 771 CTTGCTCCATTGCTGCCAAGAAGCATATTGATCAGAGCACCACCATCTTGGATGTGCAAG 830
Query 840 GCGTGGGGTTGAAGAGCTTCAGTAAGGCTGCAAGGGATCTTCTTCAGCGTATCCAGAAGA 899
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 831 GCGTGGGGTTGAAGAACTTCAGTAAGGCTGCAAGGGATCTTCTTCAGCGTATCCAGAAGA 890
Query 900 TCGATAGCGATAACTACCCTGAGACATTGAACCGTATGTTCATTATCAACGCTGGTAGTG 959
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 891 TCGATAGCGACAACTACCCTGAGACATTGAACCGTATGTTCATTATCAACGCTGGTTCTG 950
Query 960 GATTCAGGCTTCTGTGGAGCACTGTGAAATCTTTCCTTGACCCAAAGACCACCGCAAAGA 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 951 GATTCAGGCTTCTGTGGAGCACTGTGAAATCTTTCCTTGACCCAAAGACCACCGCAAAGA 1010
Query 1020 TTCACGTTCTTGGCAACAAATACCAAAGCAAGCTGCTTGAGATTATCGACTCCAATGAAC 1079
| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 1011 TCCACGTTCTTGGCAACAAATATCAAAGCAAGCTTCTTGAGATTATCGACTCCAATGAAC 1070
Query 1080 TTCCTGAGTTCTTGGGTGGTAACTGCACTTGTGCAGACAAAGGTGGATGTATGCGTTCTG 1139
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 1071 TTCCTGAGTTCTTGGGTGGTAACTGCACTTGTGCAGACAAAGGTGGGTGTATGCGTTCAG 1130
Query 1140 ACAAAGGTCCATGGAACGACCCTGACATCTTCAAGATGGTTCAGAACGGAGAAGGAAAGT 1199
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1131 ACAAAGGTCCATGGAACGACCCTGACATCTTCAAGATGGTTCAAAACGGAGAAGGGAAGT 1190
Query 1200 GCCCAAGGAAGACTTTGTCAAACATTGAAGAGAAGACAATCTCAGTGGACGAGAACACAA 1259
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1191 GCCCAAGGAAGACATTGTCAAACATTGAAGAGAAGACAATCTCAGTGGACGAGAACACAA 1250
Query 1260 CAATGAAATCTGATTCCTTTGCGAAGAACAAATTCGATGCAGAGAACACAAAATTCATAC 1319
||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 1251 CAATGAAATGTGATTCCTTTGCGAAGAACAAATTCGATGCAGAGAACGCGAAATTCATAC 1310
Query 1320 CGATGATTGACAAAACTGTGAATGCTTCTACATGGCCTACAAATCTCCACAAGTCAAACT 1379
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 1311 CGATGATTGACAAAACTGTGAATGCTACTACTTGGCCTACAAATCTCCACAAGTCAAACT 1370
Query 1380 ATCCTGAACCTGAAGATTTATACTCTGCCGTGAAGCCATCGCAGAGGAGAGGAGGAGAAG 1439
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1371 ATCCCGAACCTGAAGATTTATACTCTGCCGTGAAGCCATCGCAGAGGAGAGGAGGAGAAG 1430
Query 1440 GTTATTTATTCGGGGGAGTGATGTCTTTGGTGATGGGGTTAATGACTGTGGTGAGGCTAA 1499
| ||||||||||| || |||||||| ||| |||||||||||||||||||||||||||| |
Sbjct 1431 GATATTTATTCGGAGGCGTGATGTCGTTGATGATGGGGTTAATGACTGTGGTGAGGCTGA 1490
Query 1500 CGAAGAACATGCCAAGGAAGCTCACTGAGGCTGCCATTTACGGTGGTGAAGTGGACAAAG 1559
|||| |||||||||||||||||||||||||| || ||||||||||| |||| ||| ||||
Sbjct 1491 CGAAAAACATGCCAAGGAAGCTCACTGAGGCCGCGATTTACGGTGGCGAAGCGGAGAAAG 1550
Query 1560 CAGAGACTACAATGGTGTCAAACCAAGAGTATATGTCGATGGTGAAGAGAATGGCCGAGT 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1551 CAGAGACTACAATGGTGTCAAACCAAGAGTATATGTCGATGGTGAAGAGAATGGCGGAGC 1610
Query 1620 TGGAGGAGAAATGTAGGTCTTTGGACAATCAGCCTGCAGCGTTCTCGCCAGAGAAAGAAC 1679
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 1611 TGGAGGAGAAATGTAGGTCTTTGGACAATCAGCCGGCAGCGTTCTCGCCGGAGAAAGAAC 1670
Query 1680 AGATTCTCACCGCTGCTCTCAGCCGTGTCGACGAGCTAGAGCTTCAGTTGGCTCAGACCA 1739
|||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1671 AGATTCTCACTGCTGCTCTTAGCCGTGTCGACGAGCTTGAGCTTCAGTTGGCTCAGACCA 1730
Query 1740 AAAAGACGCTGGAGGAAACCATGGCAACGCAGCATGTGATAATGGCTTATATCGACaaga 1799
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 1731 AAAAGACGCTGGAGGAAACCATGGCTACGCAGCATGAGATAATGGCTTATATCGACAAGA 1790
Query 1800 agaaaaagaagaagaagTTCTTTGGATTCTGAAAGACTTGATAATGC---C-TCAAGACT 1855
|||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||
Sbjct 1791 AGAAAAAGAAGAAGAAGTTCTTCGGATTCTGAAAGACTTGATAATGCATGCCTCAAGACT 1850
Query 1856 TTGAAGAAACCTGGaaaaatatatataaatccatatttattatatatataaacataaata 1915
||||||||||||||||| |||||| | | |||| || | ||| | | ||||||||
Sbjct 1851 TTGAAGAAACCTGGAAA--TATATA-A--T---TATT-AT-ACATA-A-A--CATAAATA 1896
Query 1916 ttattCGTGAAGAGTTTTTACAGATAAAAATGTGGGAAATTTTCTTTCTGTAAATGTTTT 1975
| |||||||||||||||||| |||||||||||||| |||||| |||||||||||| ||||
Sbjct 1897 T-ATTCGTGAAGAGTTTTTAAAGATAAAAATGTGG-AAATTTGCTTTCTGTAAATTTTTT 1954
Query 1976 GTTGTTTGTCCCTCTGGAAATATCTGAAAGCTTATGTTTACCACTTATCAATTCTTTCAC 2035
||| ||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||
Sbjct 1955 GTTATTTGTCCCT--GGAAATATCCGAAAGCTTATGTCTACCACTTATCA-TTCTTTCAC 2011
Query 2036 ACCTAATTTGTAACGTACCaaaaacaaaaatatatatgttataa 2079
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2012 ACCTAATTTGTAACGTACTAAAAACAAAAATATATATGTTATAA 2055
> Ahg943888 jgi|Araly1|943888|scaffold_700117.1
Length=1696
Score = 1020 bits (552), Expect = 0.0
Identities = 1331/1695 (79%), Gaps = 102/1695 (6%)
Strand=Plus/Plus
Query 175 GACTTT-AACCATGACGGATACAAT-GTCTGCTCATATGGATCGACATAATAAGCTTGAT 232
|||||| || |||| |||||||||| || ||||||| ||||||||||||||||| | |||
Sbjct 10 GACTTTAAATCATGGCGGATACAATGGT-TGCTCATTTGGATCGACATAATAAGATAGAT 68
Query 233 -TATGACG-GCTCAGAGGATGA-AA-AGA-AAACAAAGCTTTGTTCCCTCAAGAAGAAAG 287
| ||| | |||||| ||||| || ||| |||||| ||||| || || |||||||| |
Sbjct 69 GT-TGA-GATCTCAGAAGATGATAACAGATTAACAAAACTTTGCTCTCTGAAGAAGAAGG 126
Query 288 CAATCAATGCCTCCAACAAATTCAAACACTCCTTCACCAAGAGAA-CTCGAAGGAACAGC 346
|||| ||||| | ||||| || || |||||| | ||||||| || ||||||| | |||
Sbjct 127 CAATAAATGCGACGAACAAGTTTAAGCACTCCATGACCAAGA-AAGGTCGAAGGCATAGC 185
Query 347 CGAGTCATGTCTGTCTCTATTGTTGACGATATTGAT-CTTGAAGAGCTTCAAGCTGTTGA 405
|| || || |||||| || ||||| || || ||| | |||||||| ||||| |||||
Sbjct 186 CGTGTGGCGTGTGTCTCAATCGTTGATGAAATCGATAC-GGAAGAGCTGCAAGCGGTTGA 244
Query 406 CGCTTTCCGTCAAGCTCTTATCCTAGACGAGCTTCTCCCTTCCAAACACGATGATCATCA 465
|||||||||||||||||||| ||||||| || || ||||| |||||||||||||||||
Sbjct 245 TGCTTTCCGTCAAGCTCTTATTTTAGACGAACTACTTCCTTCTAAACACGATGATCATCA 304
Query 466 CATGATGCTGAGGTTTC-TGAGGGCAAGGAAGTTTGATCTTGAGAAA-GCAAAGCAAATG 523
||||||||| ||| ||| |||||||||| ||||||||||| || ||| || ||||| |||
Sbjct 305 CATGATGCTTAGG-TTCTTGAGGGCAAGAAAGTTTGATCTCGA-AAAGGCGAAGCATATG 362
Query 524 TGGACTGATATGATCCATTGGAGGAAAGAGTTTGGTGTTGACACAATCATGGAGGACTTT 583
||| |||||||| | | ||||||||||| | ||| | ||||| |||||||||||||||
Sbjct 363 TGGGCTGATATGCTTAACTGGAGGAAAGAATATGGCGCAGACACGATCATGGAGGACTTT 422
Query 584 GATTTCAAGGAGATTGATGAAGT-CCTCAAGTACTACCCTCAAGGTTACCATGGTGTTGA 642
|||||||| || || || ||||| || |||| || || ||||| || |||||||||||
Sbjct 423 GATTTCAAAGAAATCGACGAAGTGGTTC-AGTATTATCCACAAGGATATCATGGTGTTGA 481
Query 643 CAAAGATGGAAGGCCTGTTTACATTGAGAGGCTAGGCCAAGTTGATGCCACAAAGCTGAT 702
||| || ||||| ||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct 482 CAAGGAAGGAAGACCTATCTATATTGAGAGGCTAGGCCAAGTTGATGCCACAAAGCTGAT 541
Query 703 GCAAGTCACTACCATCGATAGGTATGTCAAGTACCATGTGAGAGAGTTTGAGAAGACTTT 762
| |||| || || || ||||||||||| ||||||||||| | |||||| |||||||||||
Sbjct 542 GAAAGTGACCACAATTGATAGGTATGTGAAGTACCATGTCAAAGAGTTCGAGAAGACTTT 601
Query 763 CAATATCAAATTACCAGCTTGTTCCATTGCTGCCAAGAAG-CATATTGATCAGAGCACCA 821
||| ||||||| || ||||||||||| ||||| || ||| || |||||||||||||| |
Sbjct 602 CAACGTCAAATTCCCGGCTTGTTCCATCGCTGCGAA-AAGACACATTGATCAGAGCACAA 660
Query 822 CCATCTTGGATGTGCAAGGCGTGGGG-TTGAAGAGCTTCAGTAAGGCTGCAAGGGATCTT 880
| ||||||||||| |||||||||||| || || | ||||| || ||||||| ||||||
Sbjct 661 CGATCTTGGATGTTCAAGGCGTGGGGCTT-AATAACTTCAACAAAGCTGCAAAAGATCTT 719
Query 881 CTTCAGCGTATCCAGAAGATCGATAGCGATAACTACCCTGAGACATTGAACCGTATGTTC 940
|||||| |||| ||||| ||||| | |||||||||||| ||||| ||||||||||||||
Sbjct 720 CTTCAGAGTATTCAGAAAATCGACAACGATAACTACCCGGAGACGCTGAACCGTATGTTC 779
Query 941 ATTATCAACGCTGGT-AGTGGATTCAGGCTTCTGTGGAGCACTGTGAAATCTTTCCTTGA 999
|| ||||| |||||| | ||| || |||||| | |||||||| |||||||||||||||||
Sbjct 780 ATCATCAATGCTGGTTA-TGGGTTTAGGCTTTTATGGAGCACAGTGAAATCTTTCCTTGA 838
Query 1000 CCCAAAGACCACCGCAAAGATTCACGTTCTTGGCAACAAATACCAAAGCAAGCTGCTTGA 1059
||||||||| || || ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 839 CCCAAAGACTACAGCGAAGATTCACGTTCTTGGCAACAAATACCAAAGCAAACTGCTAGA 898
Query 1060 GATTATCGACTCCAATGAACTTCCTGAGTTCTTGGGTGGTAACTGCACTTGTGCAGACAA 1119
|| || || |||||||||| |||||||||||||||||||| ||||| || ||||||||
Sbjct 899 AATCATTGAGGCCAATGAACTGCCTGAGTTCTTGGGTGGTAAGTGCACCTGCGCAGACAA 958
Query 1120 AGGTGGATGTATGCGTTCTGACAAAGGTCCATGGAACGACCCTGACATCTTCAAGATGGT 1179
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||
Sbjct 959 AGGTGGATGTATGCGTTCAGACAAAGGTCCATGGAACGACCCTGAGATCTTCAAGTTGGT 1018
Query 1180 TCAGAACGGAGAAGGAA-AGTGCCCAAGGAAGA-CTTTGTCAAACATTGAAGAGAAGACA 1237
||||||||| ||||| | | |||| ||| || ||| |||| || || || ||||||
Sbjct 1019 TCAGAACGGTGAAGGGAGA-TGCCTGCGGAGGAGCTT-GTCAGGGATCGAGGAAAAGACA 1076
Query 1238 ATCTC--AGTGGA-CGA-GAACACAAC-AATGAAAT-CTGATTCCTTTGCGAAGA---AC 1288
||||| ||| | | | ||| |||| || ||||| | || || ||| || ||
Sbjct 1077 ATCTCTGAGTATAACAACGAA-ACAAAGAA-GAAATGC-GAA-CCAGA-CGA-GACTTAC 1130
Query 1289 AA--ATTC-GATGCAGAGAACACAAAATTCATACCGATGATTGACAA-AACTGTGAATGC 1344
|| | || | ||| ||||| | || | | | | || ||||| || |||| ||||
Sbjct 1131 AAGCAATCTGCTGCGGAGAAGG-AGAAG--A-A--GTTCATCGACAAGAA-TGTGGATGC 1183
Query 1345 TTCTACAT-GGCCTACAAATCTCCACAAG--T--CAA-A-CTAT-CCTGAACCTGAAGAT 1396
| || || |||||||||| | |||||| | ||| | || | || || | | |||||
Sbjct 1184 TGCTG-ATTGGCCTACAAAGATTCACAAGGCTAACAACAACTCTACC-GAGCTTAAAGAT 1241
Query 1397 TTATACTCTGCCGTGAAGCCATCGCAGAGGAGAGGAGGAGAAGGTTATTTATTCGGGGGA 1456
| ||||| || ||||| || | | |||||||||| | | |||| || || |
Sbjct 1242 GTGTACTCGGCTGTGAATCCGTTGGAGAGGAGAGG-GTAC----TTAT--AT--GGAAGC 1292
Query 1457 GTGATGTCTTTGGTGATGGGGTTAATGACTGTGGTGAGGCTAACGAAGAACATGCCAAGG 1516
|||||| | ||| | |||||| || || ||| |||||||||| |||||||||||||||
Sbjct 1293 GTGATGGCATTGCTAATGGGGATAGTGGGAGTGATGAGGCTAACCAAGAACATGCCAAGG 1352
Query 1517 AAGCTCACTGAGGCTGCCAT-T-TA-C-G-GT-GGT-GAA--GTGGACAAAG-CAGAGAC 1566
|||||||| ||||| | | || | | | || | ||| || | | | |||
Sbjct 1353 AAGCTCACCGAGGCAAATGTGTATAGCCGCGAAGGCAGCGCCGTGTACCAGGACGGAGTG 1412
Query 1567 TACAATGGTGTCAAACCAAGAGTATATGTCGATGGTGAAGAGAATGGCCGAGT-TGGAGG 1625
|| | |||| | || ||||||||| |||||||||||| |||| | || | | ||||
Sbjct 1413 -ACTGTTATGTCGAGGCAGGAGTATATGGCGATGGTGAAGAAAATGACAGA-TCTCGAGG 1470
Query 1626 AGAAATGTAGGTCTTTGGACAA-TCAGCCTGCAGCGTTCTC-GCCAGAGAAAGAACAGAT 1683
|||| |||| ||| |||| | |||| |||| | ||| | | |||| |||| |||
Sbjct 1471 AGAAGTGTAAGTCCATGGA-AGCTCAGGCTGC-GTTTTCACTGG-AGAGGGAGAA--GAT 1525
Query 1684 TCTC-ACCGCTGCTCT-CAGCCGTGTCGACGAGCTAGAGCTTCAGTTGGCTCAGACCAAA 1741
||| || ||||| || | | ||||| ||| |||| |||||||||||| || | |||||
Sbjct 1526 TCTAGAC-GCTGCACTTC-GTCGTGTTGACCAGCTCGAGCTTCAGTTGTCTGAAACCAAC 1583
Query 1742 AAGACGCTGGAGGAAACCATGGCAACGCAGCATGTGATAATGGCTTATATCGACaagaag 1801
||| | ||||| || || ||| | | ||| |||| |||||||||||| ||||| ||||
Sbjct 1584 AAGGCACTGGACGAGACAATGACGAGGCAACATGAGATAATGGCTTACATCGA---GAAG 1640
Query 1802 aaaaagaagaagaag 1816
|||||||||||||||
Sbjct 1641 AAAAAGAAGAAGAAG 1655
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79227709600
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5