BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G21630.1
Length=2395
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481031 jgi|Araly1|481031|fgenesh2_kg.4__91__AT2G21630.1 3653 0.0
Ahg481081 jgi|Araly1|481081|fgenesh2_kg.4__141__AT2G21630.1 1295 0.0
> Ahg481031 jgi|Araly1|481031|fgenesh2_kg.4__91__AT2G21630.1
Length=2311
Score = 3653 bits (1978), Expect = 0.0
Identities = 2205/2316 (95%), Gaps = 10/2316 (0%)
Strand=Plus/Plus
Query 2 TTACTAGAGAGGTTAGTCAACCATGGCGGAGTTTGGAGAGCTTGAAGCTCAAGATGGAGT 61
||||| ||||| | |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1 TTACTGGAGAGATAAGTCAACCATGGCGGAGTTTGGAGAGCTCGAAGCTCAAGATGGAGT 60
Query 62 AAGAATGCCATGGAACATCATCCCCGTCGCAACGAA-AAAGGAACAATCAATCGATTCCG 120
||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||
Sbjct 61 TAGAATGCCATGGAACATCATCCCCGTCGCAACGAAGAAA-GAACAATCAATCGACTCCG 119
Query 121 AAGTTCCAGTTTCCGCCATTTACACACCTCTGAAACCTCTTAGATC--TCAATCCCTTCT 178
|| |||||||||||||||||||||||||||||||||||| | | | ||| || |||||
Sbjct 120 AAATTCCAGTTTCCGCCATTTACACACCTCTGAAACCTC-TCG-CCGATCATTCTCTTCT 177
Query 179 CCTTCCTTACTCTCCTCTCCGTTGCCGGACTTGTCGCTCCGTTCTAAACCCTTACTCCGT 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 178 CCTTCCTTACTCTCCTCTCCGTTGCCGGACTTGTCGCTCCGTTCTAAACCCTTACTCCGT 237
Query 239 CGTAGATTTCTCCGCTTGTAATTGGGGTTGTCCTTTCTGCTTCAATCGGAATCCTTTCCC 298
||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct 238 CGTCGATTTCTCCGCCTGTATTTGGGGTTGTCCTTTCTGCTTCAATCGGAATCCTTTCCC 297
Query 299 GC-TAAATTACTCTTCAGTCGCCGATAACAATCTCCCGCCGGAGCTTTTTCCTCATTCCA 357
|| | |||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 298 GCGT-AATTACTCTTCAATCGCCGATAACAATCTCCCGCCGGAGCTTTTTCCACATTCCA 356
Query 358 CAACTGTTGAGTATCTCTGTGATTCCTTCTCTTCTCCTTCTCCTCCTGTTTTCCTCTTCG 417
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 357 CAACTGTTGAGTATCTTTGTGACTCCTTCTCTTCTCCTTCTCCTCCTGTTTTCCTCTTCG 416
Query 418 TTGTTGATACTTGTTTGATCTCTGAAGAACTCGATTTCCTCAAATCATCTCTCTTCCAAG 477
| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 417 TCGTTGATACTTGCTTGATCTCTGAAGAACTTGATTTCCTCAAATCATCTCTCTTCCAAG 476
Query 478 CTCTT-GATCTTCTTCCTGATACCTCCATCCTTGGTCTCATTACGTTTGATTCGTTAGTT 536
|| || |||||||||||||||||||||||| | ||||||||||| |||||||| ||||||
Sbjct 477 CT-TTGGATCTTCTTCCTGATACCTCCATCGTCGGTCTCATTACCTTTGATTCATTAGTT 535
Query 537 CGTGTTTACGAGCTTGGATTCCCACACTGTACCAAATCTTACTTCTTCCATGGAAACAAA 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 536 CGTGTTTACGAGCTTGGATTCCCACACTGTACCAAATCTTACTTCTTCCATGGAAACAAA 595
Query 597 GACTGTACTAAAGATCAGCTTTTGGATCAGCTGAGTTTCTTCGTCAAGAATCCTAAACCT 656
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 596 GACTGTACTAAAGATCAGCTCTTGGATCAGCTGAGTTTCTTCGTCAAGAACCCTAAACCT 655
Query 657 TCTTCAGGTGTCATTGCTGGTGCTAGAGATGGTCTCTCTTCCGACGACATTGCTCGGTTT 716
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 656 TCTTCAGGTGTCATTGCTGGTGCTAGAGATGGTCTCTCTTCCGACGACATTGCACGGTTT 715
Query 717 CTGTTACCTGCCTCTGATTGCCACTTTACTCTTCACTCTGTTCTTGAGGAGCTGGGAAAC 776
|||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 716 CTGTTACCGGCCTCCGATTGCCAGTTTACTCTTCACTCTGTTCTTGAGGAGCTGGGAAAC 775
Query 777 AGTCCCTGGCCCGTTGCAGCTGATCACCGTCCTGCGAGATGCACTGGTGTTGCTCTCCGT 836
| |||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||
Sbjct 776 AATCCCTGGCCCGTTGCACCTGATCACCGCCCTGCGAGATGCACTGGTGTTGCCCTCCGA 835
Query 837 ATCGCTGCTAGTCTCTTAGGAGCTTGCTTTCCTGGCTCTGCTGCTAGAATCATGGCTTTT 896
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 836 ATCGCTGCTGGTCTCTTAGGAGCTTGCTTTCCTGGCTCTGCTGCTCGAATCATGGCTTTT 895
Query 897 ATTGGTGGACCTTCCACTCAAGGCCCTGGAGCTATTGTTTCTCGGGAGCTTTCGGATCCT 956
|||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||
Sbjct 896 ATTGGTGGACCTTCCACTGAAGGCCCTGGAGCTATTGTTTCCCAGGAGCTTTCGGATCCA 955
Query 957 ATTCGTTCTCATAAGGATATTGATAAAGATTCTGCTATGTATTACCACAAAGCTGTTGAA 1016
||||| ||||||||||| ||||||||||||||||||| |||||||||||| ||||| ||
Sbjct 956 ATTCGCTCTCATAAGGACATTGATAAAGATTCTGCTACGTATTACCACAATGCTGTCGAG 1015
Query 1017 TTCTATGAGATGCTTGCGAAACAACTTGTTCATCAAGGTCATGTTCTTGATGTTTTTGCT 1076
||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1016 TTCTATGAGATGCTTGCAAAACAACTCGTTCATCAAGGTCATGTTCTTGATGTTTTCGCA 1075
Query 1077 AGTTCTGTTGATCAGGTAGGCATTGCTGAGCTCAAAGTTGCAGTTGAGCAGACTGGTGGA 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 AGTTCTGTTGATCAGGTAGGCATTGCTGAGCTCAAAGTTGCAGTTGAGCAGACTGGTGGA 1135
Query 1137 TTTGTCGTGCTTGCTGAAAGTTTTGGCCACTCAGTATTTAGAGATTCTCTCAAACGCGTG 1196
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1136 TTTGTTGTGCTTGCTGAAAGTTTTGGCCACTCAGTATTTAGGGATTCTCTCAAACGCGTG 1195
Query 1197 TGTCAGTCAGGTGAAAATGATCTAGGCTTGTCCTCATGTGGTATATTTGAAATTAACTGC 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1196 TGTCAGTCAGGTGAAAATGATCTAGGCTTGTCCTCATGTGGTATATTTGAAATTAACTGC 1255
Query 1257 TCAAAGGATATCAAAGTTCAGGGAATTATTGGCCCTTGCGCATCTCTCGAAAAGAAAGGA 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 TCAAAGGATATCAAAGTTCAGGGAATTATTGGCCCTTGCGCATCTCTCGAAAAGAAAGGA 1315
Query 1317 CCGTTGTGCTCTGACACTGCCATCGGTCAGGGACACACAAGCGCATGGAAGATGTGTGGC 1376
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1316 CCGTTGTGCTCTGACACTGCCGTCGGTCAGGGACACACAAGCGCATGGAAGATGTGTGGC 1375
Query 1377 CTCGACAACAACACTTCCATATGTTTGGTTTTTGAAATTGCTAAAATAGATACAGCTGAT 1436
|| ||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct 1376 CTTGACAAAAACACTTCAATATGTTTGGTTTTTGAAATTGCTAAAAGGGATACAGCTGAT 1435
Query 1437 GTTGTTTTGCAGTCGCAGAGCAATCAGTTTTACTTTCAATTTTTGACATACTATCAGCAC 1496
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1436 GTTGTTTTGCAGTCGCAGAGCAATCAGTTTTACTTTCAATTTTTAACATACTATCAGCAC 1495
Query 1497 TCAAATGGTCAAACAAGACTCCGGGTAACAACTCTTTCTAGAAGATGGGTAATGGGAACT 1556
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1496 TCAAATGGTCAAACAAGACTCCGGGTAACAACTCTTTCAAGAAGATGGGTAATGGGAACT 1555
Query 1557 GAAAGCTTACAGGAGTTGAGCAATGGTTTTGACCAAGAAGCAGCTGCTGTAGTAATGGCA 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1556 GAAAGCTTACAGGAGTTGAGCAATGGTTTTGACCAAGAAGCAGCTGCTGTAGTAATGGCA 1615
Query 1617 CGACTTATTTCCTCCAAAATGGAGACTCAGCCTGAGTTTAATCCCCAAAGGTGGGTCGAT 1676
|| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1616 CGGCTTATTTCTTTCAAAATGGAGACTCAGCCTGAGTTTAATCCCCAAAGGTGGGTCGAT 1675
Query 1677 AAAGCGTTGATAAATCTATGCACCTGGTTTGGAGATTACCAGAAAGGCAATCCTTCTTCC 1736
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1676 AAAGCTTTGATAAATATATGCACCTGGTTTGGAGATTACCAGAAAGGCAATCCTTCTTCC 1735
Query 1737 TTTAGCTTATCTTCTCAGTTATCAATTTTCCCGCAGTTTGTGTTTCACTTGCGCCGATCT 1796
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1736 TTTAGCTTGTCTTCTCAGTTATCAATTTTCCCGCAGTTTGTGTTTCACTTGCGCCGATCT 1795
Query 1797 CAGTTTGTCCAGGTCTTTAACAACAGCCCAGACGAGACAGCATATTTTCGAATGATATTG 1856
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1796 CAGTTTGTCCAGGTCTTTAACAACAGCCCAGACGAGACAGTATATTTTCGAATGATATTG 1855
Query 1857 TACAGAGAGAACGTTTCTAATTCAGTCGTGATGATTCAACCTTCACTGATTTCTTTCTCA 1916
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 1856 TACAGAGAGAACGTTTCGAATTCAATCGTGATGATTCAACCTTCACTGATTTCTTTCTCA 1915
Query 1917 TTCCATTCACCGCCAGAGCCAATTCTTCTTGATGTAGCATCCATTGCAGCTGACAGAATC 1976
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1916 TTCCATTCACCGCCAGAACCAATTCTTCTTGATGTAGCATCCATTGCAGCTGACAGAATC 1975
Query 1977 TTACTGTTGGATTCATACTTCACCCTTGTAATATTTCACGGCTCTACAATCGCTCAATGG 2036
|||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||
Sbjct 1976 CTACTGTTGGATTCATACTTCACTCTTGTAATATTTCATGGTTCTACCATCGCCCAATGG 2035
Query 2037 CGAAAAGCTGGATACCATAATCAACCTGAACACCAGGCATTTGGGCATCTGTTGCAGTCA 2096
| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||
Sbjct 2036 CAAAAAGCTGGATACCATAATCAACCTGAACACCAGGTATTTGAGCATCTGTTGCAATCA 2095
Query 2097 CCTCGTGACTACGCAGACACAATCATGAGTGAAAGGTTTCCCACTCCGCGTCTTGTTATA 2156
|||||| ||||| ||||||||||||| | |||| |||||||||||||||||||||| |||
Sbjct 2096 CCTCGTAACTACTCAGACACAATCATCAATGAACGGTTTCCCACTCCGCGTCTTGTCATA 2155
Query 2157 TGCGATCAGTATGGTTCACAGGCTCGTTTTCTTCTAGCAAAACTGAATCCTTGTGATGGA 2216
|| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 2156 TGTGATCAGTATGGTTCACAGGCGCGTTTTCTTCTAGCAAAACTGAATCCTTCTGATGGC 2215
Query 2217 GATGCTCATTTTTCCGGCCAAAGTAATGTTTTCACGGATGATGTTAGCTTGTCTGTATTT 2276
|| |||| | ||||||| | |||||||||||||| |||||||||||||||||||| |||
Sbjct 2216 GAAGCTCCTCTTTCCGGGGAGAGTAATGTTTTCACAGATGATGTTAGCTTGTCTGTGTTT 2275
Query 2277 CTTGATCATCTTAGACGACTCATTGTTCATTGATAT 2312
||||||||||||||||||||||||||||| ||||||
Sbjct 2276 CTTGATCATCTTAGACGACTCATTGTTCACTGATAT 2311
> Ahg481081 jgi|Araly1|481081|fgenesh2_kg.4__141__AT2G21630.1
Length=2055
Score = 1295 bits (701), Expect = 0.0
Identities = 906/1002 (90%), Gaps = 25/1002 (2%)
Strand=Plus/Plus
Query 1277 GGGAATTATTGGCCCTTGCGCATCTCTCGAAAAGAAAGGACCGTTGTGCTCTGACACTGC 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1071 GGGAATTATTGGCCCTTGCGCATCTCTCGAAAAGAAAGGACCGTTGTGCTCTGACACTGC 1130
Query 1337 CATCGGTCAGGGACACACAAGCGCATGGAAGATGTGTGGCCTCGACAACAACACTTCCAT 1396
| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1131 CGTCGGTCAGGGACACACAAGCGCATGGAAGATGTGTGGCCTTGACAAAAACACTTCCAT 1190
Query 1397 ATGTTTGGTTTTTGAAATTGCTAAAATAGATACAGCTGATGTTGTTTTGCAGTCGCAGAG 1456
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1191 ATGTTTGGTTTTTGAAATTGCTAAAAGGGATACAGCTGATGTTGTTTTGCAGTCGCAGAG 1250
Query 1457 CAATCAGTTTTACTTTCAATTTTTGAC-----AT--A-CTATCAGCACTCAAATGGTCAA 1508
|||||||||||||||||||||||| || || | |||| |||||||||||||||||
Sbjct 1251 CAATCAGTTTTACTTTCAATTTTTAACATATTATGGATCTATTAGCACTCAAATGGTCAA 1310
Query 1509 ACAAGACTCCGGGTAACAACTCTTTCTAGAAGATGGGTAATGGGAACTGAAAGCTTACAG 1568
|||||||||| ||| | | | | ||| |||| ||| || || || | | | |
Sbjct 1311 ACAAGACTCC-GGT-A-ATC-CATTC--GAAGCCAGGT-TTGAAAATTG---G-TCAGTG 1359
Query 1569 GAGTTGAGCAATGGTTTTGACCAAGAAGCAGCTGCTGTAGTAATGGCACGACTTATTTCC 1628
||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1360 GAGTTGAGCAATGGTTTCGACCAAGAAGCAGCTGCTGTAGTCATGGCACGGCTTATTTCT 1419
Query 1629 TCCAAAATGGAGACTCAGCCTGAGTTTAATCCCCAAAGGTGGGTCGATAAAGCGTTGATA 1688
| ||||| | | || | ||||||||||||||||||||||||||||| ||||||
Sbjct 1420 TTTAAAAT--TG--T--TTCTTACTTTAATCCCCAAAGGTGGGTCGATAAAGCTTTGATA 1473
Query 1689 AATCTATGCACCTGGTTTGGAGATTACCAGAAAGGCAATCCTTCTTCCTTTAGCTTATCT 1748
|||||||| |||||||||||||||||||| ||||||||||||||||| |||| ||| ||
Sbjct 1474 AATCTATGTACCTGGTTTGGAGATTACCAAAAAGGCAATCCTTCTTCGTTTAACTTGTCG 1533
Query 1749 TCTCAGTTATCAATTTTCCCGCAGTTTGTGTTTCACTTGCGCCGATCTCAGTTTGTCCAG 1808
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1534 TCTCAGTTATCAATTTTCCCGCAGTTTGTATTTCACTTGCGCCGATCTCAGTTTGTCCAG 1593
Query 1809 GTCTTTAACAACAGCCCAGACGAGACAGCATATTTTCGAATGATATTGTACAGAGAGAAC 1868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1594 GTCTTTAACAACAGCCCAGACGAGACAGCATATTTTCGAATGATATTGTACAGAGAGAAC 1653
Query 1869 GTTTCTAATTCAGTCGTGATGATTCAACCTTCACTGATTTCTTTCTCATTCCATTCACCG 1928
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1654 GTTTCTAATTCAATCGTGATGATTCAACCTTCACTGATTTCTTTCTCATTCCATTCACCG 1713
Query 1929 CCAGAGCCAATTCTTCTTGATGTAGCATCCATTGCAGCTGACAGAATCTTACTGTTGGAT 1988
|||| |||||||| || ||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1714 GCAGAACCAATTCTCCTGGATGTAGCATCCATTGCAGCTTACAGAATCCTACTGTTGGAT 1773
Query 1989 TCATACTTCACCCTTGTAATATTTCACGGCTCTACAATCGCTCAATGGCGAAAAGCTGGA 2048
|||||||| || ||||||||||||||||| ||||| || || ||||||||||||||||||
Sbjct 1774 TCATACTTTACTCTTGTAATATTTCACGGTTCTACCATTGCCCAATGGCGAAAAGCTGGA 1833
Query 2049 TACCATAATCAACCTGAACACCAGGCATTTGGGCATCTGTTGCAGTCACCTCGTGACTAC 2108
|||||||||||||||||||| |||||||||| |||||||||||| ||||||||| ||||
Sbjct 1834 TACCATAATCAACCTGAACATCAGGCATTTGAGCATCTGTTGCAATCACCTCGTAACTAT 1893
Query 2109 GCAGACACAATCATGAGTGAAAGGTTTCCCACTCCGCGTCTTGTTATATGCGATCAGTAT 2168
||||| |||||| | |||||| |||||||||||||||||||||| | |||||||||||||
Sbjct 1894 GCAGATACAATCGTCAGTGAACGGTTTCCCACTCCGCGTCTTGTCACATGCGATCAGTAT 1953
Query 2169 GGTTCACAGGCTCGTTTTCTTCTAGCAAAACTGAATCCTTGTGATGGAGATGCTCATTTT 2228
|||||||||||||||||||||||||||||||||||||||| |||||| || |||| | ||
Sbjct 1954 GGTTCACAGGCTCGTTTTCTTCTAGCAAAACTGAATCCTTCTGATGGTGAAGCTCCTCTT 2013
Query 2229 TCCGGCCAAAGTAATGTTTTCACGGATGATGTTAGCTTGTCT 2270
||||| | |||||||||||||| ||||||||||||||||||
Sbjct 2014 TCCGGGGAGAGTAATGTTTTCACAGATGATGTTAGCTTGTCT 2055
Score = 1120 bits (606), Expect = 0.0
Identities = 661/688 (96%), Gaps = 2/688 (0%)
Strand=Plus/Plus
Query 548 GCTTGGATTCCCACACTGTACCAAATCTTAC-TTCTTCCATGGAAACAAAGACTGTACTA 606
|||||||||| ||||||| |||||||||||| || |||||||||||||||||||||||||
Sbjct 375 GCTTGGATTCTCACACTGCACCAAATCTTACATT-TTCCATGGAAACAAAGACTGTACTA 433
Query 607 AAGATCAGCTTTTGGATCAGCTGAGTTTCTTCGTCAAGAATCCTAAACCTTCTTCAGGTG 666
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 434 AAGATCAGCTCTTGGATCAGCTGAGTTTCTTCGTCAAGAACCCTAAACCTTCTTCAGGTG 493
Query 667 TCATTGCTGGTGCTAGAGATGGTCTCTCTTCCGACGACATTGCTCGGTTTCTGTTACCTG 726
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 494 TCATTGCTGGTGCTAGAGATGGTCTCTCTTCCGACGACATTGCACGGTTTCTGTTACCGG 553
Query 727 CCTCTGATTGCCACTTTACTCTTCACTCTGTTCTTGAGGAGCTGGGAAACAGTCCCTGGC 786
||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 554 TCTCCGATTGCCAGTTTACTCTTCACTCTGTTCTTGAGGAGCTGGGAAACAATCCCTGGC 613
Query 787 CCGTTGCAGCTGATCACCGTCCTGCGAGATGCACTGGTGTTGCTCTCCGTATCGCTGCTA 846
||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 614 CCGTTGCAGCTGATCACCGTCCTGCGAGATGCACTGGTGTTGCTCTCCGAATCTCTGCTG 673
Query 847 GTCTCTTAGGAGCTTGCTTTCCTGGCTCTGCTGCTAGAATCATGGCTTTTATTGGTGGAC 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 674 GTCTCTTAGGAGCTTGCTTTCCTGGCTCTGCTGCTAGAATCATGGCTTTTATTGGTGGAC 733
Query 907 CTTCCACTCAAGGCCCTGGAGCTATTGTTTCTCGGGAGCTTTCGGATCCTATTCGTTCTC 966
|||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 734 CTTCCACTGAAGGACCTGGAGCTATTGTTTCCCGGGAGCTTTCGGATCCAATTCGTTCTC 793
Query 967 ATAAGGATATTGATAAAGATTCTGCTATGTATTACCACAAAGCTGTTGAATTCTATGAGA 1026
||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||
Sbjct 794 ATAAGGACATTGATAAAGATTCTGCTACGTATTACTACAAAGCTGTCGAATTCTATGAGA 853
Query 1027 TGCTTGCGAAACAACTTGTTCATCAAGGTCATGTTCTTGATGTTTTTGCTAGTTCTGTTG 1086
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 854 TGCTTGCGAAACAACTTGTTCATCAAGGTCATGTTCTTGATGTTTTCGCAAGTTCTGTTG 913
Query 1087 ATCAGGTAGGCATTGCTGAGCTCAAAGTTGCAGTTGAGCAGACTGGTGGATTTGTCGTGC 1146
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 914 ATCAGGTAGGCATTGCTGAGCTCAAAGTTGCAGTTGAGCAGACTGGTGGATATGTCGTGC 973
Query 1147 TTGCTGAAAGTTTTGGCCACTCAGTATTTAGAGATTCTCTCAAACGCGTGTGTCAGTCAG 1206
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 974 TTGCTGAAAGTTTTGGCCACTCAGTATTTAGGGATTCTCTCAAACGCGTGTGTCAGTCAG 1033
Query 1207 GTGAAAATGATCTAGGCTTGTCCTCATG 1234
||||||||||||||||||||||||||||
Sbjct 1034 GTGAAAATGATCTAGGCTTGTCCTCATG 1061
Score = 453 bits (245), Expect = 3e-126
Identities = 338/377 (90%), Gaps = 29/377 (8%)
Strand=Plus/Plus
Query 141 TACACACCTCTGAAACCTCTTAGATC--TCA---ATC---C-CTTCTCCTTCCTTACTCT 191
|||||||||||||||||| ||||||| ||| ||| | ||||||||||||||||||
Sbjct 13 TACACACCTCTGAAACCTGTTAGATCTTTCACCGATCATTCTCTTCTCCTTCCTTACTCT 72
Query 192 CCTCTCCGTTGCCGGACTTGTCGCTCCGTTCTAAACCCTTACTCCGTCGTAGATTTCTCC 251
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 73 CCTCTCCGTTGCCGGACTTGTCGCTCCTTTCTAAACCCTTACTCCGTCGTTGATTTCTCC 132
Query 252 GCTTGTAATTGGGGTTGTCCTTTCTGCTTCAATCGGAATCCTTTCCCGC-TAAATTACTC 310
||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 133 GCTTGTATTTGGGGTTGTCCTTTCTGCTTCAATCGGAATCCTTTCCCGCGT-AATTACTC 191
Query 311 TTCAGTCGCCGATAACAATCTCCCGCCGGAGCTTTTTCCTCATTCCACAACTGTTGAGTA 370
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 192 TTCAATCGCTGATAACAATCTCCCGCCGGAGCTTTTTCCTCATTCCACAACTGTTGAGTA 251
Query 371 TCTCTGTGATTCCTTCTCTTCTCCTTCTCCTCCTGTTTTCCTCTTCGTTGTTGATACTTG 430
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 252 TCTTTGTGATTCCTTCTCTTCTCCTTCTCCTCCTGTTTTCCTCTTCGTCGTTGATACTTG 311
Query 431 TTTGATCTCTGAAGAACTCGATTTCCTCAAATCATCTCTCTTCCAAGCTCTTG-ATCTTC 489
|| ||| | || |||||||| ||||||||| |||||| ||| ||||||
Sbjct 312 ------CT-TGA-----T---TT-CCTCAAATTATCTCTCTTTCAAGCT-TTGGATCTTC 354
Query 490 TTCCTGATACCTCCATC 506
|||||||||||||||||
Sbjct 355 TTCCTGATACCTCCATC 371
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 90235790405
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5