BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G21790.1
Length=2972
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481044 jgi|Araly1|481044|fgenesh2_kg.4__104__AT2G21790.1 4542 0.0
Ahg888142 jgi|Araly1|888142|Al_scaffold_0007_128 2584 0.0
Ahg925154 jgi|Araly1|925154|scaffold_200715.1 1384 0.0
Ahg888414 jgi|Araly1|888414|Al_scaffold_0007_400 95.3 2e-18
> Ahg481044 jgi|Araly1|481044|fgenesh2_kg.4__104__AT2G21790.1
Length=2930
Score = 4542 bits (2459), Expect = 0.0
Identities = 2783/2934 (95%), Gaps = 44/2934 (1%)
Strand=Plus/Plus
Query 1 GGCGGGAAAATCCCAAAACTTTTCCCGGGAAAGTAGATAAAAAATTTCGGCCATTAAAGG 60
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 1 GGCGGGAAAATCCCAAATCTTTTCCCGGGAAAGTCGATAAAAAATTTCGGCCATTAAAGG 60
Query 61 ACAAAATCACAAGAAAGTAGAAACCCTAGAGATTTTG-AAACCGAAACCCCAAAAACCCC 119
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 61 ACAAAATCACAAGAAAGTAGAAACCCTAGACATTTTGAAAACCGAAACCCCAAAAACCCC 120
Query 120 TTTGACGCCTCCTTCTTCTTATCTCTTTATAAAAAACCATTTCTTTCCTGCAACATCGTT 179
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TTTGACGCCT-C--CTTCTTATCTCTTTATAAAAAACCATTTCTTTCCTGCAACATCGTT 177
Query 180 GCTTATCATCAGACGCACATCACCTGTTCGATAAAATTCCTCTGAGAGTGttttttttGT 239
|| | ||| ||| ||||||||||||||||||||||||| | ||||
Sbjct 178 GC--A-CAT--------CAT---CTGTTCGATAAAATTCCTCTGAGAGAG----ATTTG- 218
Query 240 TTTCCTTCTGACAAAGAAATATGTATGTAGTGAAGCGTGACGGAAGACAGGAAACTGTTC 299
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 219 TTTCCTTCTGACAAAGAAATATGTATGTAGTGAAGCGTGACGGAAGACAGGAGACTGTTC 278
Query 300 ATTTCGATAAGATTACTGCGAGGCTTAAGAAACTTAGCTATGGGCTTAGCAGTGACCATT 359
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 279 ATTTCGATAAGATTACTGCGAGGCTTAAGAAACTTAGCTATGGGCTTAGTAGTGACCATT 338
Query 360 GTGACCCTGTCCTCGTTGCTCAGAAGGTCTGTGCCGGTGTCTATAAAGGAGTCACTACGA 419
|||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||
Sbjct 339 GTGACCCTGTCCTCGTTGCTCAGAAGGTTTGTGCTGGTGTCTATAAGGGAGTCACTACGA 398
Query 420 GTCAACTTGATGAGTTGGCTGCTGAAACTGCTGCTGCTATGACTTGTAACCATCCTGATT 479
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 399 GTCAACTTGATGAATTGGCTGCTGAGACTGCTGCTGCTATGACTTGTAACCATCCTGATT 458
Query 480 ATGCATCTCTTGCTGCTAGGATTGCTGTGTCGAATCTCCACAAGAACACTAAGAAGTCAT 539
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 459 ATGCATCTCTTGCTGCTAGGATTGCTGTGTCAAATCTTCACAAGAACACTAAGAAGTCAT 518
Query 540 TTTCTGAGACGATTAAGGATATGTTCTATCATGTCAATGATAGATCTGGACTAAAGTCCC 599
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 519 TTTCTGAGACGATTAAGGATATGTTCAATCATGTCAATGATAGATCTGGACTAAAGTCTC 578
Query 600 CACTAATAGCCGATGATGTGTTTGAGATAATTATGCAGAACGCTGCTCGTTTGGACAGTG 659
| |||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 579 CTCTAATAGCTGATGATGTATTTGACATAATTATGCAGAACGCTGCTCGTTTGGACAGTG 638
Query 660 AGATCATCTATGACCGTGATTTTGAATATGATTACTTTGGATTTAAAACTCTTGAGAGAT 719
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 639 AAATCATCTATGACCGTGATTTTGAATATGATTACTTTGGATTTAAAACTCTTGAGAGAT 698
Query 720 CGTACCTCTTGAAAGTCCAAGGGACTGTTGTTGAAAGGCCTCAACACATGCTGATGAGGG 779
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 699 CGTACCTCTTGAAAGTCCAAGGGACAGTTGTTGAAAGGCCTCAGCACATGCTGATGAGGG 758
Query 780 TTGCTGTTGGGATCCACAAGGATGATATTGATTCCGTGATCCAAACCTACCATTTGATGT 839
|||||||||| ||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct 759 TTGCTGTTGGCATCCACAAGGACGATATTGATTCCGCAATCCAAACTTACCATTTGATGT 818
Query 840 CTCAGAGATGGTTCACTCATGCATCTCCTACTCTCTTCAACGCAGGAACTCCAAGGCCTC 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 819 CTCAGAGATGGTTCACTCATGCATCTCCTACTCTCTTCAACGCAGGAACTCCAAGGCCTC 878
Query 900 AATTAAGTAGCTGCTTTCTAGTCTGCATGAAAGATGATAGCATTGAGGGCATATATGAAA 959
||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 879 AATTAAGCAGCTGCTTTCTAGTCTGCATGAAAGATGATAGCATTGAGGGCATTTACGAAA 938
Query 960 CACTCAAAGAGTGTGCTGTTATAAGCAAATCTGCTGGGGGTATTGGTGTTTCAGTTCATA 1019
|||||||||| ||||||||||||||||||||||| || ||||| |||||||| |||||||
Sbjct 939 CACTCAAAGAATGTGCTGTTATAAGCAAATCTGCCGGAGGTATCGGTGTTTCGGTTCATA 998
Query 1020 ATATTCGTGCTACCGGAAGTTACATTCGTGGCACAAATGGAACATCTAATGGTATTGTTC 1079
|||| ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 999 ATATCCGTGCAACTGGAAGCTACATTCGTGGCACAAATGGAACATCTAATGGTATTGTTC 1058
Query 1080 CTATGCTGCGTGTATTCAACGATACAGCTCGTTATGTTGACCAAGGAGGAGGCAAGAG-A 1138
| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
Sbjct 1059 CAATGCTGCGTGTATTCAATGATACTGCTCGTTATGTTGACCAAGGAGGAGGCAAGAGAA 1118
Query 1139 A--AGGGAGCCTTTGCTGTTTACCTGGAGCCATGGCATGCTGATGTCTATGAGTTTCTGG 1196
| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 1119 AGGAGGGAGCCTTTGCTGTATACCTGGAGCCATGGCATGCTGATGTCTTTGAGTTTCTGG 1178
Query 1197 AGCTGCGAAAGAACCATGGAAAGGAAGAACACAGGGCTAGAGATTTGTTTTATGCTCTCT 1256
||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1179 AGCTGCGGAAGAACCATGGGAAGGAAGAACACAGGGCTAGAGACTTGTTCTATGCTCTCT 1238
Query 1257 GGCTTCCAGATCTTTTCATGGAGAGGGTCCAGAATAATGGGCAGTGGTCACTGTTTTGTC 1316
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1239 GGGTTCCAGATCTTTTCATGGAGAGGGTCCAGAATAACGGGCAGTGGTCACTGTTTTGTC 1298
Query 1317 CTAACGAAGCTCCAGGTTTGGCAGATTGCTGGGGAGCTGAATTTGAGACACTGTACACTA 1376
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1299 CTAACGAAGCTCCAGGTTTGGCAGATTGCTGGGGAGCTGAATTTGAGACACTGTACACGA 1358
Query 1377 AGTATGAAAGAGAGGGAAAGGCCAAAAAGGTTGTTCAGGCGCAGCAGCTTTGGTACGAAA 1436
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 1359 AGTATGAAAGAGAGGGAAAGGCCAAAAAGGTTGTCCAGGCGCAGCAGCTTTGGTATGAAA 1418
Query 1437 TATTGACATCCCAGGTAGAAACAGGAACACCATACATGCTTTTCAAGGATTCATGCAACC 1496
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1419 TATTGACATCCCAGGTAGAAACAGGAACACCATACATGCTTTTCAAGGATTCATGCAACA 1478
Query 1497 GAAAAAGTAATCAGCAAAATCTGGGTACCATAAAGTCGTCCAACTTATGCACTGAAATCA 1556
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1479 GAAAAAGTAATCAGCAAAATCTGGGTACCATAAAGTCGTCCAATTTATGCACTGAAATCA 1538
Query 1557 TTGAGTACACTAGTCCAACAGAAACTGCTGTGTGCAATCTTGCATCTATTGCTTTACCCA 1616
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1539 TCGAGTACACTAGTCCAACAGAAACTGCTGTGTGCAATCTTGCATCTATTGCTTTACCCA 1598
Query 1617 GATTTGTAAGGGAGAAGGGTGTCCCATTAGACTCTCATCCACCTAAGCTCGCTGGCAGTC 1676
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1599 GATTTGTAAGGGAGAAGGGTGTCCCATTAGACTCTCATCCATCTAAGCTCGCTGGCAGTC 1658
Query 1677 TGGACTCAAAGAATCGTTACTTTGATTTTGAAAAATTAGCAGAGGTGACTGCTACTGTTA 1736
||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 1659 TGGGCTCAAAGAATCGTTACTTTGATTTTGACAAGTTAGCAGAGGTGACTGCTACTGTTA 1718
Query 1737 CTGTTAATCTCAATAAGATAATAGATGTGAATTACTATCCTGTGGAGACTGCAAAAACTT 1796
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1719 CTATTAATCTCAATAAGATAATAGATGTGAATTACTATCCTGTGGAGACTGCAAAAACTT 1778
Query 1797 CAAACATGCGTCATAGACCTATTGGTATTGGTGTACAAGGCCTTGCAGATGCATTTATCC 1856
|||||||||| || |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1779 CAAACATGCGACACAGACCTATTGGTATCGGTGTACAAGGTCTTGCAGATGCATTTATCC 1838
Query 1857 TCCTTGGAATGCCATTTGATTCTCCAGAGGCCCAACAACTGAATAAGGATATATTCGAAA 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1839 TCCTTGGAATGCCATTTGATTCTCCAGAGGCCCAACAACTGAATAAGGATATATTCGAAA 1898
Query 1917 CCATATACTACCATGCACTCAAAGCATCTACAGAGCTTGCTGCAAGACTTGGCCCCTATG 1976
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1899 CCATATACTACCATGCACTCAAAGCATCTTCAGAGCTTGCTGCAAGAGTTGGCCCCTATG 1958
Query 1977 AAACCTATGCTGGAAGTCCCGTGAGTAAGGGAATCCTTCAACCTGACATGTGGAATGTAA 2036
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1959 AAACCTACGCAGGAAGTCCCGTGAGTAAGGGAATCCTTCAACCTGACATGTGGAATGTTA 2018
Query 2037 TTCCATCAGACCGCTGGGACTGGGCTGTTCTTAGAGATATGATATCAAAGAATGGAGTGA 2096
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2019 TTCCATCAAACCGCTGGGACTGGGCTGTTCTTAGAGATATGATATCAAAGAATGGAGTGA 2078
Query 2097 GGAACTCTCTTTTAGTAGCACCAATGCCAACTGCTTCAACCAGTCAAATCCTTGGGAACA 2156
|||| |||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct 2079 GGAATTCTCTTTTGGTAGCACCTATGCCAACTGCTTCAACCAGTCAGATCCTCGGGAACA 2138
Query 2157 ATGAATGTTTTGAGCCCTACACATCAAACATCTACAGCCGCAGAGTCTTGAGTGGTGAAT 2216
|||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct 2139 ATGAATGTTTTGAGCCATATACATCAAACATCTACAGCCGCAGAGTCTTGAGCGGTGAAT 2198
Query 2217 TCGTAGTGGTTAATAAGCATCTTCTCCATGACCTAACTGATATGGGACTTTGGACTCCAA 2276
| |||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 2199 TTGTAGTGGTGAATAAGCATCTTCTCCATGACTTAACTGATATGGGACTCTGGACTCCAA 2258
Query 2277 CGCTGAAAAACAAATTAATTAATGAGAATGGTTCTATAGTTAATGTTGCTGAGATACCTG 2336
|||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||
Sbjct 2259 CGCTGAAAAACAAATTAATTAATGAGAATGGTTCCATAGTAAATGTTGCGGAGATACCTG 2318
Query 2337 ATGACTTGAAGGCGATTTACAGAACTGTCTGGGAAATCAAACAGAGAACAGTGGTGGACA 2396
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2319 ATGACTTGAAGGCAATTTACAGGACTGTCTGGGAAATCAAACAGAGAACAGTGGTGGACA 2378
Query 2397 TGGCTGCTGATCGTGGATGCTACATAGATCAAAGCCAAAGCTTAAACATACACATGGACA 2456
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2379 TGGCTGTTGATCGTGGATGCTACATAGATCAAAGCCAAAGCTTAAACATACACATGGACA 2438
Query 2457 AACCCAACTTCGCAAAACTCACTTCGCTA-CACTTCTATACTTGGAAAAAGGGTCTGAAA 2515
|||||||||| |||||||||||||| || ||||| ||| |||||| |||||||||||||
Sbjct 2439 AACCCAACTTTGCAAAACTCACTTC-CTTGCACTTTTATGCTTGGACAAAGGGTCTGAAA 2497
Query 2516 ACCGGGATGTACTACCTGCGATCCCGTGCTGCAGCTGATGCGATAAAGTTCACCGTTGAC 2575
||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 2498 ACCGGAATGTACTACCTGCGATCGCGTGCTGCAGCTGATGCGATAAAGTTCACAGTTGAC 2557
Query 2576 ACAGCCATGCTCAAGGAGAAGCCGAGTGTAGCAGAAGGAGACAAAGAAGTAGAAGAAGAG 2635
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2558 ACCGCCATGCTCAAGGAGAAGCCGAGTGTAGCAGAAGGAGACAAAGAAGTAGAAGAAGAG 2617
Query 2636 GATAATGAAACTAAGTTGGCGCAGATGGTATGTTCCTTGACAAACCCTGAAGAGTGTTTG 2695
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct 2618 GATAATGAAACTAAGTTGGCCCAGATGGTATGTTCCTTGACAAACCCTGACGACTGTTTG 2677
Query 2696 GCCTGCGGAAGTTGAAGCTCTAAGTTATA--GTTTGGGTCTTAAAAAGTTAGAAAGTAAA 2753
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 2678 GCCTGCGGAAGTTGAAGCTCTAATTTATATAGTTTGGGTCTTAAAAAGTTAGAAAGTAAA 2737
Query 2754 AGCATGTCTCTTGGACG--GT--CTTTTTTATTTACTT----GCTT----ATCTGGGTGT 2801
||||||||||||||||| || ||||||||||||||| |||| ||||||||||
Sbjct 2738 AGCATGTCTCTTGGACGTTGTGTCTTTTTTATTTACTTACTTGCTTGTTGATCTGGGTGT 2797
Query 2802 ATTTTGTTAATAGTTTCCTAATGCTTAATGTTGCTTGAGTTTTTGTGTAATCCAATTTCG 2861
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2798 ATTTTGTTAATAGTTTCCTAATGCTTAATGTTGCTTGAGTTTT-GTGTAATCCAATTTCG 2856
Query 2862 TTTTTACCTTTTCTCTTGAAACAATAAGGATTTGTAACGAGAATTATGTATAAC 2915
||||| | |||| |||||||||||||||| |||||||||||||| |||||||||
Sbjct 2857 TTTTTTCGTTTTTTCTTGAAACAATAAGGTTTTGTAACGAGAAT-ATGTATAAC 2909
> Ahg888142 jgi|Araly1|888142|Al_scaffold_0007_128
Length=2424
Score = 2584 bits (1399), Expect = 0.0
Identities = 2105/2447 (86%), Gaps = 44/2447 (2%)
Strand=Plus/Plus
Query 260 ATGTATGTAGTGAAGCGTGACGG-AAGACAGGAAACTGTTCATTTCGATAAGATTACTGC 318
||||| || |||||||||||||| ||| |||||||||||||| ||||| || || |||||
Sbjct 1 ATGTACGTTGTGAAGCGTGACGGTAAG-CAGGAAACTGTTCACTTCGACAAAATCACTGC 59
Query 319 GAGGCTTAAGAAACTTAGCTATGGGCTTAGCAGT-GACCATTGTGACCCTGTCCTCGTTG 377
| | || ||||||||||||||||||||||| | | || || |||||||||||||| || |
Sbjct 60 GCGCCTAAAGAAACTTAGCTATGGGCTTAGTA-TCGATCACTGTGACCCTGTCCTTGTCG 118
Query 378 CTCAGAAGGTCTGTGCCGGTGTCTATAAAGGAGTCACTACGAGTCAACTTGATGAGTTGG 437
||||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||||||| |
Sbjct 119 CTCAGAAAGTCTGTGCCGGTGTCTACAAAGGCGTCACGACGAGTCAACTCGATGAGTTAG 178
Query 438 CTGCTGAAACTGCTGCTGCTATGACTTG-TAACCATCCTGATTATGCATCTCTTGCTGCT 496
| || || || |||||||||||||| | || ||||||||||| || || ||||| |||
Sbjct 179 CCGCCGAGACCGCTGCTGCTATGAC-GGCCAATCATCCTGATTACGCTTCCCTTGCGGCT 237
Query 497 AGGATTGCTGTGTCGAATCTCCACAAGAACACTAAGAAGTCATTTTCTGAGACGATTAAG 556
||||||||||| || ||||| || |||||||||||||| ||||||||||| ||| || ||
Sbjct 238 AGGATTGCTGTATCCAATCTGCATAAGAACACTAAGAAATCATTTTCTGAAACGGTT-AG 296
Query 557 -GATATGTTCTA-TCATGTCAATGATAGATCTGGACTAAAGTCCCCACTAATAGCCGATG 614
|| |||| | | |||||||||||| ||||||||||| || || ||||| || | ||
Sbjct 297 AGACATGTAC-AGTCATGTCAATGAGAGATCTGGACTCGCTTCTCCTCTAATTGCTGCTG 355
Query 615 ATGTGTTTGAGATAATTATGCAGAACGCTGCTCGTTTGGACAGTGAGATCATCTATGACC 674
|||| | |||||||||||| || | ||| ||||| |||||||||| ||||||||||| |
Sbjct 356 ATGTATACGAGATAATTATGAAGCATGCTACTCGTCTGGACAGTGAAATCATCTATGATC 415
Query 675 GTGATTTTGAATATGATTACTTTGGATTTAAAACTCTTGAGAGATCGTACCTCTTGAAAG 734
| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||
Sbjct 416 GCGATTTTGAATATGATTACTTTGGATTTAAAACGCTTGAGAGATCATACCTCTTAAAAG 475
Query 735 TCCAAGGGACTGTTGTTGAAAGGCCTCAACACATGCTGATGAGGGTTGCTGTTGGGATCC 794
| ||||| | || ||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 476 TGCAAGGCAAAGTGGTTGAAAGGCCTCAACACATGCTGATGAGGGTTTCTGTTGGCATCC 535
Query 795 ACAAGGATGATATTGATTCCG-TGATCCAAACCTACCATTTGATGTCTCAGAGATGGTTC 853
||||||| ||||| ||||||| | ||| |||| |||||||| ||||||||| ||||||||
Sbjct 536 ACAAGGAAGATATCGATTCCGCT-ATCAAAACTTACCATTTAATGTCTCAGCGATGGTTC 594
Query 854 ACTCATGCATCTCCTACTCTCTTCAACGCAGGAACTCCAAGGCCTCAATTAAGTAGCTGC 913
||||||||||||||||||||||||||| ||||||| |||||| |||||||||| ||||||
Sbjct 595 ACTCATGCATCTCCTACTCTCTTCAACTCAGGAACCCCAAGGGCTCAATTAAGCAGCTGC 654
Query 914 TTTCT-AGTCTGCATGAAAGATGATAGCATTGAGGGCATATATGAAACACTCAAAGAGTG 972
||||| | |||||||||| ||||||||||| ||||| |||||||| ||| | ||||||||
Sbjct 655 TTTCTGA-TCTGCATGAAGGATGATAGCATCGAGGGGATATATGACACATTGAAAGAGTG 713
Query 973 TGCTGTTATAAGCAAATCTGCTGGGGGTATTGGTGTTTCAGTTCATAATATTCGTGCTAC 1032
|||||||||||||||||| |||||||| ||||||||||||||||| || || ||||| ||
Sbjct 714 TGCTGTTATAAGCAAATCGGCTGGGGGCATTGGTGTTTCAGTTCACAACATCCGTGCAAC 773
Query 1033 CGGAAGTTACATTCGTGGCACAAATGGAACATCTAATGGTATTGTTCCTATGCTGCGTGT 1092
||||| ||||||||||| || |||||| ||||||||||||||||||| |||||| | ||
Sbjct 774 TGGAAGCTACATTCGTGGTACCAATGGAGCATCTAATGGTATTGTTCCAATGCTGAGGGT 833
Query 1093 ATTCAACGATACAGCTCGTTATGTTGACCAAGGAGGAGGCAAGAGAAAGGGAGCCTTTGC 1152
||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 834 GTTCAATGATACTGCTCGTTATGTTGACCAAGGAGGAGGCAAGAGAAAAGGTGCCTTTGC 893
Query 1153 TGTTTACCTGGAGCCATGGCATGCTGATGTCTATGAGTTTCTGGAGCTGCGAAAGAACCA 1212
|| || |||||||| ||||||||||| | | ||| |||||||| || |||||||| ||
Sbjct 894 CGTATATCTGGAGCCCTGGCATGCTGACATTTTTGACTTTCTGGAACTCCGAAAGAATCA 953
Query 1213 TGGAAAGGAAGAACACAGGGCTAGAGATTTGTTTTATGCTCTCTGGCTTCCAGATCTTTT 1272
||||||||| ||||||||||||||||| |||||||||| ||| ||| | || ||||||||
Sbjct 954 TGGAAAGGAGGAACACAGGGCTAGAGACTTGTTTTATGGTCTTTGGATACCCGATCTTTT 1013
Query 1273 CATGGAGAGGGTCCAGAATAATGGGCAGTGGTCACTGTTTTGTCCTAACGAAGCTCCAGG 1332
|||||||||||| |||| | |||||||||||||||||||||||||||| |||||||||||
Sbjct 1014 CATGGAGAGGGTTCAGACTGATGGGCAGTGGTCACTGTTTTGTCCTAATGAAGCTCCAGG 1073
Query 1333 TTTGGCAGATTGCTGGGGAGCTGAATTTGAGACACTGTACACTAAGTATGA-AAG-AGAG 1390
|||||||||||| ||||| || || || |||| | |||||||| |||| || || || |
Sbjct 1074 TTTGGCAGATTGTTGGGGTGCAGAGTTCGAGAGATTGTACACTCAGTACGAGAATCAG-G 1132
Query 1391 GGAAAGGCCAAAAAGGTTGTTCAGGCGCAGCAGCTTTGGTACGAAATATTGACATCCCAG 1450
|||| |||||| |||||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct 1133 GGAA-GGCCAAGAAGGTTGTCCAGGCACAGCAGCTTTGGTACGAAATCTTGACATCCCAA 1191
Query 1451 GTAGAAACAGGAACACCATACATGCTTTTCAAGGATTCATGCAACCGAAAAAGTAATCAG 1510
||||||||||| ||||||||||||||||||||||||||||| ||| | ||||| |||||
Sbjct 1192 GTAGAAACAGGGACACCATACATGCTTTTCAAGGATTCATGTAACAGGAAAAGCAATCAA 1251
Query 1511 CAAAATCTGGGTACCATAAAGTCGTCCAACTTATGCACTGAAATCATTGAGTACACTAGT 1570
||||||||||||||||| ||||| ||||| |||||||| |||||| |||| ||||| |||
Sbjct 1252 CAAAATCTGGGTACCATCAAGTCTTCCAATTTATGCACCGAAATCCTTGAATACACAAGT 1311
Query 1571 CCAACAGAAACTGCTGTGTGCAATCTTGCATCTATTGCTTTACCCAGATTTGTAAGGGAG 1630
||||||||||| |||||||| |||||||||||||||||||||||| | ||||||||||||
Sbjct 1312 CCAACAGAAACGGCTGTGTGTAATCTTGCATCTATTGCTTTACCCCGGTTTGTAAGGGAG 1371
Query 1631 AAGGGTGTCCCATTAGACTCTCATCCACCTAAGCTCGCT-GGCAGTCTGGACTCAAAGAA 1689
|| | |||| || ||||| ||||| ||||| | | | |||||| ||| |||||||||
Sbjct 1372 AATGACATCCCCTTGGACTCACATCCGTCTAAGATTG-TAGGCAGTTTGGGCTCAAAGAA 1430
Query 1690 TCGTTACTTTGATTTTGAAAAATTAGCAGAGGTGACTGCTACTGTTACTGTTAATCTCAA 1749
||||||||||||||| || || ||||||||||||||||| || || ||||||||||| ||
Sbjct 1431 TCGTTACTTTGATTTCGACAAGTTAGCAGAGGTGACTGCCACAGTGACTGTTAATCTTAA 1490
Query 1750 TAAGATAATAGATGTGAATTACTATCCTGTGGAGACTGCAAAAACTTCAAACATGCGTCA 1809
||||| |||||||||||| | ||||| |||||||| |||||||| ||||||||||| ||
Sbjct 1491 CAAGATTATAGATGTGAATCATTATCCAGTGGAGACAGCAAAAACCTCAAACATGCGACA 1550
Query 1810 TAGACCTATTGGTATTGGTGTACAAGGCCTTGCAGATGCATTTATCCTCCTTGGAATGCC 1869
||| ||||| ||||||||||||||||| |||||||||||||||||||| || ||||||||
Sbjct 1551 TAGGCCTATCGGTATTGGTGTACAAGGTCTTGCAGATGCATTTATCCTTCTCGGAATGCC 1610
Query 1870 ATTTGATTCTCCAGAGGCCCAACAACTGAATAAGGATATATTCGAAACCATATACTACCA 1929
||||||||| || ||| | ||||||||||| || || ||||| |||||||||||||||||
Sbjct 1611 ATTTGATTCCCCTGAGTCTCAACAACTGAACAAAGACATATTTGAAACCATATACTACCA 1670
Query 1930 TGCACTCAAAG-CATCTACAGAGCTTGCTGC-AAG-ACTTGGCCCCTATGAAACCTATGC 1986
||||||||| | ||||| ||||| ||||| | ||| | || | |||||||| || |
Sbjct 1671 TGCACTCAA-GTCATCTTCAGAGATTGCTACTAAGGAG--GGTACATATGAAACTTAC-C 1726
Query 1987 T-GGAAGTCCCGTGAGTAAGGGAATCCTTCAACCTGACATGTGGAATGTAATTCCATCAG 2045
|||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||| |
Sbjct 1727 AAGGAAGTCCTGTGAGTAAGGGAATTCTTCAACCTGATATGTGGAACGTAATTCCATCTG 1786
Query 2046 ACCGCTGGGACTGGGCTGTTCTTAGAGATATGATATCAAAGAATGGAGTGAGGAACTCTC 2105
|||||||||||||||||| ||| || |||||||| |||||||||||| | || || ||||
Sbjct 1787 ACCGCTGGGACTGGGCTGCTCTCAGGGATATGATTTCAAAGAATGGAATCAGAAATTCTC 1846
Query 2106 TTTTAGTAGCACCAATGCCAACTGCTTCAACCAGTCAAATCCTTGGGAACAATGAATGTT 2165
|| | || ||||||||||| |||||||||||||| || || |||||||||||||||||||
Sbjct 1847 TTCTGGTGGCACCAATGCCTACTGCTTCAACCAGCCAGATTCTTGGGAACAATGAATGTT 1906
Query 2166 TTGAGCCCTACACATCAAACATCTACAGCCGCAGAGTCTTGAGTGGTGAATTCGTAGTGG 2225
|||| || || || |||||||| ||||| || |||||||| ||||||||||||||||| |
Sbjct 1907 TTGAACCTTATACCTCAAACATTTACAGTCGTAGAGTCTTAAGTGGTGAATTCGTAGTAG 1966
Query 2226 TTAATAAGCATCTTCTCCATGACCTAACTGATATGGGACTTTGGACTCCAACGCTGAAAA 2285
| || ||||||||||| |||||||| |||||||||||||| ||| |||| || |||||||
Sbjct 1967 TGAACAAGCATCTTCTTCATGACCTGACTGATATGGGACTCTGGTCTCCTACACTGAAAA 2026
Query 2286 ACAA-ATTAATTA-ATGAGAATGGTTCTATAGTTAATGTTGCTGAGATACCTGATGACTT 2343
|||| || ||| | |||||||||||||||| || ||||| ||||||||||| |||||
Sbjct 2027 ACAAGAT-AAT-ACATGAGAATGGTTCTATCGTGAATGTCAAGGAGATACCTGACGACTT 2084
Query 2344 GAAGGCGATTTACAGAACTGTCTGGGAAATCAAACAGAGAACAGTGGTGGACATGGCTGC 2403
||| ||||||||||| ||||||||||| || || |||||||||||||| |||||||| ||
Sbjct 2085 GAAAGCGATTTACAGGACTGTCTGGGAGATTAAGCAGAGAACAGTGGTTGACATGGCCGC 2144
Query 2404 TGATCGTGGATGCTACATAGATCAAAGCCAAAGCTTAAACATACACATGGACAAACCCAA 2463
||||||||||||| ||||||||||||||||| || || ||||||||||| ||| ||||
Sbjct 2145 CGATCGTGGATGCTTTATAGATCAAAGCCAAAGTTTGAATATACACATGGA-AAAGCCAA 2203
Query 2464 -CTTCGCAAAACTCACTTCGCTACACTTCTATACTTGGAAAAAGGGTCTGAAAACCGGGA 2522
||| |||||||||||||| |||||||||| |||||||||||||| ||||||| ||||
Sbjct 2204 ACTTTGCAAAACTCACTTCTTTACACTTCTACGCTTGGAAAAAGGGTTTGAAAAC-GGGA 2262
Query 2523 -TGTACTACCTGCGATCCCGTGCTGCAGCTGATGCGATAAAGTTCACCGTTGACACAGCC 2581
|||||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||
Sbjct 2263 ATGTACTACCTGCGATCACGTGCTGCAGCCGATGCGATAAAGTTCACAGTAGACACAGCA 2322
Query 2582 ATGCTCAA-GGAGAAGCCGAGTGTAGCAGAAGGAGACAAAGAAGTAGA-AGAAGAGGATA 2639
||||| || ||||||||| | |||| | || ||| | |||||| | | |||||| || |
Sbjct 2323 ATGCT-AACGGAGAAGCCTAATGTAACTGA-GGA--CGAAGAAGCA-ACAGAAGAAGACA 2377
Query 2640 ATGAAACTAAGTTGG-CGCAGATGGTATGTTCCTTGACAAACCCTGA 2685
| || || ||| ||| | |||||||| || || |||||||||| |||
Sbjct 2378 ACGAGACAAAGATGGGCACAGATGGTTTGCTCTTTGACAAACCGTGA 2424
> Ahg925154 jgi|Araly1|925154|scaffold_200715.1
Length=2109
Score = 1384 bits (749), Expect = 0.0
Identities = 1234/1462 (84%), Gaps = 57/1462 (4%)
Strand=Plus/Plus
Query 1113 ATGTTGACCAAGGAGGAGGCAAG-AGAAAGGGAGCC-TTTGCTGTTTACCTGGAGCCATG 1170
||||||| ||||||||||| ||| || || ||| || |||||||| ||||||||||||||
Sbjct 651 ATGTTGATCAAGGAGGAGGTAAGAAG-AATGGA-CCATTTGCTGTATACCTGGAGCCATG 708
Query 1171 GCATGCTGATGTCTATGAGTTTCTGGAGCTGCGA-AAGAACCATGGAAAGG-A-AGAACA 1227
||||||||| ||| ||||||||| || | | | |||||||| ||||||| | ||||||
Sbjct 709 GCATGCTGACATCTTTGAGTTTCTAAAGAT-CCAGAAGAACCACGGAAAGGTACAGAACA 767
Query 1228 --CAGG-GCTAG-AGATTTGTTTTATGCTCTCTGGCTTCCAGATCTTTTCATGGAGAGGG 1283
|||| | || | | | | | || ||||||||| | |||||||||||||||||||| |
Sbjct 768 GTCAGGAG-GAGCACA-TGGCTATA-GCTCTCTGGATACCAGATCTTTTCATGGAGAGAG 824
Query 1284 TCCAGA-ATAATGGGCAGTGGTCACTGTTTTGTCCTAACGAAGCTCCAGGTTTGGCAGAT 1342
| || | || ||||| |||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 825 T-CAAACATGATGGGAAGTGGTCATTGTTTTGTCCTAATGAAGCTCCAGGTTTGGCAGAT 883
Query 1343 TGCTGGGG-AGCTGAATTTGAGACACTGTACACTAAGTATGAAAGAGAGGGAAAGGCCAA 1401
|||||||| | | |||||||||| ||||||||| ||||||||||||||||||||||| ||
Sbjct 884 TGCTGGGGCA-CAGAATTTGAGAGACTGTACACAAAGTATGAAAGAGAGGGAAAGGCGAA 942
Query 1402 AAAGGTTGTTCAGGCGCA-GCAGCTTTGGTACGAAATATTGACATCCCAGGTAGAAACAG 1460
|||||| ||| |||||| | | |||| | || || |||||||||||| |||||||||
Sbjct 943 GAAGGTTTTTCCGGCGCAGGAACCTTT-TTTTGATATCTTGACATCCCAGCTAGAAACAG 1001
Query 1461 GAACACCATACATGCTTTTCAAGGATTCATGCAACCGAAAAAGTAATCAGCAAAATCTGG 1520
||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||||| |
Sbjct 1002 GAATGCCATACATGCTTTTTAAGGATTCATGCAACAGAAAAAGCAATCAGCAAAATCTTG 1061
Query 1521 GTACCATAAAGTCGTCCAACTTATGCACTGAAATCATTGAGTACACTAGTCCAACAGAAA 1580
||||||||||||| || | ||||| |||| | | |||||||||||||||||||| ||||
Sbjct 1062 GTACCATAAAGTCCTCTAGTTTATGTACTGGAGTTATTGAGTACACTAGTCCAACGGAAA 1121
Query 1581 CTGCTGTGTGCAATCTTGCATCTATTGCTTTACCCAGATTTGTAAGGGAGAAGGGTGTCC 1640
| ||||||||||||||||||| |||| | || | | | | ||||
Sbjct 1122 CCACTGTGTGCAATCTTGCATCAATTG-------C----TT-T----G-G-A---CGTCC 1160
Query 1641 CATTAGACTCTCATCCACCTAAGCTCGCTGGCAGTCTG-GACTCAAAGAATCGTTACTTT 1699
|||| |||||||||||| ||||||| |||||||| ||| | ||||||| ||||||||||
Sbjct 1161 CATTGGACTCTCATCCATCTAAGCTTGCTGGCAGCCTGCG-GTCAAAGAGTCGTTACTTT 1219
Query 1700 GATTTTGAAAAATTAGCAGAGGTGACTGCTACTGTTACTGTTAATCTCAATAAGATAATA 1759
|||| ||| || ||||| ||||| ||||| | ||||||| | ||||| ||| |||||||
Sbjct 1220 GATTATGACAAGTTAGCCGAGGTAACTGCAATTGTTACTAATGATCTCGATAGGATAATA 1279
Query 1760 GATGTG-AATTACTATCCTGTGGAGACTGCAAAAACTTCAAACATGCGTCATAGACCTAT 1818
|| | | || ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1280 GACG-GAAACTACTATCCTGTGGAGACTGCAGAAACTTCAAACATGCGTCATAGACCTAT 1338
Query 1819 TGGTATTGGTGTACAAGGCCTTGCAGATGCATTTATCCTCCTTGGAATGCCATTTGATTC 1878
||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1339 TGGTATTGGAGTACAAGGTCTTGCAGATGCATTTATCCTTCTTGGAATGCCATTTGACTC 1398
Query 1879 TCCAGAGGCCCAACAACTGAATAAGGATATATTCGAAACCATATACTACCATGCACTCAA 1938
||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1399 TCCAGAGGCCCAAAAACTAAATAAGGATATATTTGAAACCATATACTACCATGCACTCAA 1458
Query 1939 AGCATCTACAGAGCTTGCTGCAAGACTTGGCCCCTATGAAACCTATGCTGGAAGTCCCGT 1998
||||||| ||||||||||||||||| || | ||||| || || ||||||||| |
Sbjct 1459 AGCATCTTCAGAGCTTGCTGCAAGAAATGATGCATATGAGACATACAAAGGAAGTCCCAT 1518
Query 1999 GAGTAAGGGAATCCTTCAACCTGACATGTGGAATGTAATTCCATCAGACCGCTGGGACTG 2058
||| ||||| || ||||||||||||||||||||||| | ||||||| |||||||||||||
Sbjct 1519 GAGCAAGGGGATTCTTCAACCTGACATGTGGAATGTGACTCCATCAAACCGCTGGGACTG 1578
Query 2059 GGCTGTTCTTAGAGATATGATATCAAAGAATGGAGTGAGGAACTCTCTTTTAGTAGCACC 2118
|| | ||||||| || ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1579 GGATTTTCTTAGGGAAATGATATCAAAGAATGGAGTGAGGAACTCTCTTTTAGTATCACT 1638
Query 2119 AATGCCAACTGCTTCAACCAGTCAAATCCTTGGGAACAATGAATGTTTTGAGCCCTACAC 2178
||||||||||||||||||||||| || || |||||||| |||| ||| ||||| |||||
Sbjct 1639 GATGCCAACTGCTTCAACCAGTCAGATTCTCGGGAACAACGAATCTTTCGAGCCATACAC 1698
Query 2179 ATCAAACATCTACAGCCGCAGAGTCTTGAGTGGTGAATTCGTAGTGGTTAATAAGCATCT 2238
||||||||||||||||| ||||| |||||||| |||| | || | || |||||||||||
Sbjct 1699 ATCAAACATCTACAGCCACAGAGGATTGAGTGGGGAATCCATACTTGTGAATAAGCATCT 1758
Query 2239 TCTCCATGACCTAACTGATATGGGACTTTGGACTCCAACGCTGAAAAACAA-ATTAATTA 2297
||| ||||| | ||||| ||||| |||||||||||||| |||||| | || || | ||
Sbjct 1759 TCTTCATGATTTGACTGAAATGGGTCTTTGGACTCCAACACTGAAAGAGAAGATCA-TTG 1817
Query 2298 ATGAGAATGGTTCTATA-GTTAATGTTGCTGAGATACCTGATGACTTGAAGGCGATTTAC 2356
||||||| ||||| ||| || ||||| | ||||||||||||||| |||| || ||||||
Sbjct 1818 ATGAGAACGGTTCGATACGT-AATGTCCCAGAGATACCTGATGACATGAAAGCTATTTAC 1876
Query 2357 AGAACTGTC-TGGGAAATCAAACAGAGAACAGTGGTGGACATGGCTGCTGATCGTGGATG 2415
||||||| | ||||| || ||||| ||||| ||||| |||||||||| ||||||||||||
Sbjct 1877 AGAACTG-CATGGGAGATTAAACAAAGAACCGTGGTCGACATGGCTGTTGATCGTGGATG 1935
Query 2416 CTACATAGATCAAAGCCAAAGCTTAAACATACACATGGACA-AACCCAACTTCGCAAAA- 2473
|||||||||||||||||||| |||||||||| || |||| | |||| | || | |||||
Sbjct 1936 CTACATAGATCAAAGCCAAACCTTAAACATAAACCTGGA-AGAACCTAGCTAC-CAAAAA 1993
Query 2474 CTCACTTCGCTACACTTCTATACTTGGAAAAAGGGTCTGAAAACCGGGATGTACTACCTG 2533
|||||||| ||||||| |||||||||| |||||| |||||||||||||| ||||||||
Sbjct 1994 CTCACTTCTTTACACTTTTATACTTGGACTAAGGGTTTGAAAACCGGGATGCACTACCTG 2053
Query 2534 CGATCCCGTGCTGCAGCTGATG 2555
||||| |||||| || || |||
Sbjct 2054 CGATCACGTGCTACAACT-ATG 2074
Score = 399 bits (216), Expect = 4e-110
Identities = 310/354 (88%), Gaps = 11/354 (3%)
Strand=Plus/Plus
Query 668 TATGACCGTGATTTTGAATATGATTACTTTGGATTTAAAACTCTTGAGAGATCGTACCTC 727
||||||||||||||||| ||||||| ||||||||||||||| |||||||| | |||||||
Sbjct 272 TATGACCGTGATTTTGATTATGATTTCTTTGGATTTAAAACGCTTGAGAGGTTGTACCTC 331
Query 728 TTGAAAGTCCAAGGGACTGTTGTTGAAAGGCCTCAACACATGCTGATGAGGGTTGCTGTT 787
||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| ||||
Sbjct 332 TTGAAAGTCCATGGGAAAGTTGTTGAAAGGCCTCAACACATGCTCATGAGAGTTGTTGTT 391
Query 788 GGGATCCACAAGGATGATATTGATTCCGTGATCCAAACCTACCATTTGATGTCTCAGAGA 847
|| || |||| ||| ||||||||||| | ||| |||| |||||||||||||||||||||
Sbjct 392 GGCATTCACATGGAAGATATTGATTCTGCAATCAAAACTTACCATTTGATGTCTCAGAGA 451
Query 848 TGGTTCACTCATGCATCTCCTACTCTCTTCAACGCAGGAACTCCAAGGCCTCAATTAAGT 907
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 452 TTGTTCACTCATGCATCTCCTACTCTCTTCAACGCAGGAACTCCAAGGCCTCAATTAAGT 511
Query 908 AGCTGCTTTCT-AGTCTGCATGAAAGATGATAGCATTGAGGGCATATATGAAACACTCAA 966
||| ||||||| | ||||||||| |||||||||||| ||| ||| | | | | ||
Sbjct 512 AGCAGCTTTCTTA-TCTGCATGAGAGATGATAGCATCGAGAGCACAC-T----C-C--AA 562
Query 967 AGAGTGTGCTGTTATAAGCAAATCTGCTGGGGGTATTGGTGTTTCAGTTCATAA 1020
| |||||| ||||||||| |||||||| || ||||| ||||||||||||||||
Sbjct 563 A-AGTGTGATGTTATAAGAAAATCTGCAGGCAGTATTAGTGTTTCAGTTCATAA 615
> Ahg888414 jgi|Araly1|888414|Al_scaffold_0007_400
Length=876
Score = 95.3 bits (51), Expect = 2e-18
Identities = 68/76 (89%), Gaps = 2/76 (3%)
Strand=Plus/Plus
Query 1066 TAATGGTATTGTTCCTA-TGCTGCGTGTATTCAACGATACAGCTCGTTATGTTGACCAAG 1124
||||||||||||||| | |||| || |||||||| | ||| ||| |||||||||||||||
Sbjct 9 TAATGGTATTGTTCC-AGTGCTTCGGGTATTCAATGCTACTGCTAGTTATGTTGACCAAG 67
Query 1125 GAGGAGGCAAGAGAAA 1140
||||||||||||||||
Sbjct 68 GAGGAGGCAAGAGAAA 83
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112213861770
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5