BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G21910.1 Length=1533 Score E Sequences producing significant alignments: (Bits) Value Ahg932132 jgi|Araly1|932132|scaffold_400120.1 2300 0.0 Ahg352944 jgi|Araly1|352944|fgenesh1_pg.C_scaffold_7000117 381 8e-105 Ahg907906 jgi|Araly1|907906|Al_scaffold_0002_987 289 5e-77 Ahg338681 jgi|Araly1|338681|fgenesh1_pg.C_scaffold_2000780 276 4e-73 Ahg925517 jgi|Araly1|925517|scaffold_201078.1 270 2e-71 Ahg475591 jgi|Araly1|475591|fgenesh2_kg.2__721__AT1G65340.1 121 2e-26 > Ahg932132 jgi|Araly1|932132|scaffold_400120.1 Length=1574 Score = 2300 bits (1245), Expect = 0.0 Identities = 1443/1539 (94%), Gaps = 12/1539 (1%) Strand=Plus/Plus Query 1 ATGGCTTACGTAGGCTTAGTTGAAGTCTTTATTGCCTTACTTGTCTTTTTCTTCTTCCAT 60 |||||||||||||||||| ||||||||||||| || || ||||||||| ||||||||||| Sbjct 21 ATGGCTTACGTAGGCTTACTTGAAGTCTTTATAGCTTTTCTTGTCTTTATCTTCTTCCAT 80 Query 61 TTCTTGATCCACAAGAAATCTCATCAAATCACACCTAGAAACTGGCCAGTTCTTGGGATG 120 |||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||||| Sbjct 81 TTCTTGATCCACAAGAAAGCCCATCATATCTTACCTAGAAACTGGCCAGTTCTTGGGATG 140 Query 121 CTTCCTGGTGTCCT-TGTCATGCTTCACAGGATCAATGACTATGTCGCGGAGATTCTTGA 179 ||||||||||| || | |||||||||||| ||| |||||||| ||||| |||||||| || Sbjct 141 CTTCCTGGTGTGCTCT-TCATGCTTCACATGATTAATGACTACGTCGCAGAGATTCTCGA 199 Query 180 GGTCTCCAACTTGACATTTGCCTTCAAAGGCCCATGGTTCTCTGGAATGAACATGTTGAT 239 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct 200 GGTCTCCAACTTGACTTTTGCCTTCAAAGGCCCATGGTTCACTGGAATGAACATGTTGAT 259 Query 240 CACTGCAGATCCTTCAAATATTCAACACGTTTTCAGCTCCAACTTCTCCAATTACGACAA 299 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || || Sbjct 260 CACTGCAGATCCTGCAAATATTCAACACGTTTTCTGCTCCAACTTCTCCAATTATGATAA 319 Query 300 AGGACCGGAGTTCAAAGAGATGTTTGATTTTCTAGGAAATGGGATCTTCACTGCTGACTC 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 320 AGGACCGGAGTTCAAAGAGATGTTCGATTTTCTAGGAAATGGGATCTTCACTGCTGACTC 379 Query 360 CAAACTATGGGAGGATATGAGGAAATCCGCATTGGTTGTGCTTAGCCATCAAGGGTTTCA 419 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 380 CAAACTCTGGGAGGATATGAGGAAATCCGCACTGGTTGTGCTTAGCCATCAAGGGTTTCA 439 Query 420 AAGCTTCTCATTGAGGACCATCACGTGTAAAATCAAGAACGGGCTTGTCCCCGTTCTTGA 479 ||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||| Sbjct 440 AAGCTTCTCATTGAGGACCATCACGCGTAAAATCAAGAATGGGCTTGTCCCGGTTCTTGA 499 Query 480 TCATTTTGCGGAGGCTAATACGGTTTTCGATTTACAAGACGTGTTCCAGAGGTTAGCATT 539 ||||||| | ||||| |||||||||||||||||||||||||||||||| || |||||||| Sbjct 500 TCATTTTTCAGAGGCGAATACGGTTTTCGATTTACAAGACGTGTTCCAAAGATTAGCATT 559 Query 540 CGATGTAACCCTTACTCTGGTTACGGGTTGTGACTCAAGTTCTCTTTCCATTGAAATGCC 599 |||||||||||||||||| |||||||||| |||||| |||||||||||||| |||||||| Sbjct 560 CGATGTAACCCTTACTCTTGTTACGGGTTATGACTCGAGTTCTCTTTCCATAGAAATGCC 619 Query 600 AAAGAATGAGTATGCTAAAGCTATGGATGATGCTGAAGAAGTGGTTGTGTACAGACATGT 659 |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 620 GAAGAATGAGTATGCGAAAGCTATGGATGATGCTGAAGAAGTGGTTGTGTATAGACATGT 679 Query 660 CAAGCCTGTGGTCTTGTGGAAGCTGCAAAACTGGATTGGACTCGGAGAAGAGAAGAAGAT 719 |||||| || ||||||||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct 680 TAAGCCTCTGATCTTGTGGAAGTTGCAAAACTGGTTTGGACTCGGACAAGAGAAGAAGAT 739 Query 720 GA-AGGAAGCTAATGCCGCTTTTGACAGATCTTGTGCAAAGTATATATCTGCAAAGAGGG 778 || | |||||||||| ||||| ||||||||||||||||||||||||||||||||||| | Sbjct 740 GACA-AAAGCTAATGCTGCTTTCGACAGATCTTGTGCAAAGTATATATCTGCAAAGAGAG 798 Query 779 AGGAGATAATAAGTCATCATTCTAATATTGGAGGAGAAGCTCATGCAGAGGATTTATTAA 838 ||||||||||||||||||||||||||||||| ||| |||||| || |||||||||||||| Sbjct 799 AGGAGATAATAAGTCATCATTCTAATATTGGGGGAAAAGCTCGTGAAGAGGATTTATTAA 858 Query 839 GCGTCTACATGAATCTAGATATTTCCAAGTATGAGCTTTTGAACCCA-AACGATGATAAC 897 ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||| Sbjct 859 GCGTCTACATGAATCTAGATACTTCCAAGTATGAGCTTTTGAACCCAGAA-GATGATAAC 917 Query 898 TTCCTTAAAGACATCATCAAGAGTTTCATGCTTGCTGGAAGAGACGCCATTGCAACAACT 957 ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 918 TTCCTCAAAGACATCATCAAGAGTTTCATGCTCGCCGGAAGAGACGCCATTGCAACAACT 977 Query 958 CTCACTTGGTTCT-TCTGGCTTCTCTCCAAGAACCCTGAAGCTGTGACCAAGATCCGCCA 1016 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 978 CTCACTTGGTTCTGT-TGGCTTCTCTCCAAGAACCCTGAAGCTGTGACCAAGATCCGCCA 1036 Query 1017 AGAGATCAACACAAATCTACCAGGATCCGGAATGAGTTTAGATGCAGACAAGTTAAACAA 1076 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1037 AGAGATCAACACAAATCTACCAGGATCCGGAATGAGTTTAGATGCAGACATGTTAAACAA 1096 Query 1077 GATGGTATATTTACATGGTGCATTGTGTGAATCACTACGCCTCTACGCGCCAATCCCGTT 1136 |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 1097 GATGGTGTATTTACATGGTGCATTGTGTGAATCACTACGCCTCTACGCTCCAATCCCATT 1156 Query 1137 CGAGAGAAAGACTCCCATAAAGCAAGATGTGCTTCCAAGTGGACACATGGTCGATAAAAA 1196 |||| |||||||||||||||| ||||||||||||||||||||||||| |||||| ||| Sbjct 1157 CGAGCGAAAGACTCCCATAAAACAAGATGTGCTTCCAAGTGGACACAAAGTCGATGCAAA 1216 Query 1197 TTGGAAGATTTTGTTCTCTGTCTATGCATTGGGGAGGATGA-GGTCCGTGTGGGGACAGG 1255 ||||||||||||||||||||||||||||||||||||||||| || | ||||||||| | | Sbjct 1217 TTGGAAGATTTTGTTCTCTGTCTATGCATTGGGGAGGATGAAGG-CTGTGTGGGGAGAAG 1275 Query 1256 ACGCGTCTGAATTCAAACCAGAGAGATGGATCTCTGAGAGAAATGGAGGCTTGAAA-CAT 1314 |||| | |||||||||||||||||||||||| |||||||||||||||||||| ||| ||| Sbjct 1276 ACGCATGTGAATTCAAACCAGAGAGATGGATTTCTGAGAGAAATGGAGGCTT-AAAGCAT 1334 Query 1315 GAACCATCTTTCAAGTTCTTCGTGTTTAATTCTGGTCCAAGAAACTGCTTGGGGAAAAAT 1374 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct 1335 GAACCATCTTTCAAGTTCTTCGTGTTTAATTCTGGTCCAAGAAATTGCTTGGGGAAAAGT 1394 Query 1375 TTATCTTTCTTGCAGATGAAGACAGTAGCTGTTGAGATCATACGAAATTATGACATCAAG 1434 |||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| Sbjct 1395 TTATCTTTCTTGCAGATGAAGACAGTGGCTATTGAGATTATACGAAATTATGACATCAAG 1454 Query 1435 GTCGTTGAAGGGCACAAGATCGAGCCAGCTTCTTCCATAATCCTTCACATGAAACATGGC 1494 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1455 GTCGTTGAAGGGCACAAGATCGAGCCAGCTTCTTCCATAGTCCTTCACATGAAACATGGC 1514 Query 1495 CTTAAAGTCACAGTTTCTAAGAGAGGCTTGGTTTCATAA 1533 || |||||||||||| |||||||| ||||||| |||||| Sbjct 1515 CTCAAAGTCACAGTTGCTAAGAGATGCTTGGTCTCATAA 1553 > Ahg352944 jgi|Araly1|352944|fgenesh1_pg.C_scaffold_7000117 Length=2985 Score = 381 bits (206), Expect = 8e-105 Identities = 1091/1497 (73%), Gaps = 146/1497 (10%) Strand=Plus/Plus Query 94 CCTAGAAACTGGCCAGTTCTTGGGATGCT-TCCTGGTGTCCTTGTC-ATGCTTCACAGGA 151 ||||| |||||||| ||||| || ||||| ||| || | || | | |||| | | ||| Sbjct 1549 CCTAGGAACTGGCCGGTTCTCGGTATGCTCCCCT-GTCTGCTCG-CGGTGCTCCGCCGGA 1606 Query 152 TCAATGACTATGTCGCGGAGATTCTTGAGGTCTCCAACTTGACATTTGCCTTCAAAGG-C 210 || |||||||| ||| ||||||||||| ||||| | ||||||||| | ||||| || | Sbjct 1607 TCTATGACTATATCGTTGAGATTCTTGAAATCTCCGATTTGACATTTTCATTCAAGGGAC 1666 Query 211 C-CATGGTTCTCTGGAATGAACATGTTGATCACTGCAGATCCTTCAAATATTCAACACGT 269 | | | |||| |||||||| | |||||| |||| | |||||| | || ||||| || | Sbjct 1667 CGC-T-GTTCGCTGGAATGGATATGTTGCTCACGGTTGATCCTGCTAACATTCATCATAT 1724 Query 270 TTTCAGCTCCAACTTCTCCAATTACGA-CAAAGGACCGGAGTTCAAAG-AGATGTTTGAT 327 | | ||| |||||||| |||||| | ||||||| | || ||||||| || | |||||| Sbjct 1725 AATGAACTCAAACTTCTCAAATTAC-ATCAAAGGATCTGACTTCAAAGAAG-TTTTTGAT 1782 Query 328 -TTTCTAGGAAATGGGATCT-TCACTGCTGACTCCAAACTATGGGAGGATATGAGGAAAT 385 ||| | ||| | || || | |||| | ||||| | |||||| || || ||||||| | Sbjct 1783 GTTT-TTGGAGACGGAAT-TATCACCACAGACTCTGATCTATGGAAGAATCTGAGGAAGT 1840 Query 386 CCGCAT-TGGTTGTGCT-TAGCCATCAAGGGTTTC-AAAGCTTCTCATTGAGGACCATCA 442 | || | |||| | ||||||| ||||| |||| || |||||||| |||| || Sbjct 1841 -CTTATCAAGCAATGCTCCA-TCATCAAGCGTTTCAAAAG-TTTTCATTGAGTACCA-CA 1896 Query 443 CG-TGTAAAATCAAGAACGGGCTTG-TCCCCGTTCTTGATCATTTTGCGGAGGCTAA--T 498 | ||||| ||| | ||||||||| ||| | ||||| |||||||||| |||| || Sbjct 1897 AGAAGTAAACTCATGGACGGGCTTGTTCCTC-TTCTTAATCATTTTGCAGAGG--AAGGA 1953 Query 499 ACGGTTTTCGATTTACAAGACGTGTTCCAGAGGTT-AGCATTCGATGTAAC--CCTTACT 555 || || | ||||| ||||| || || |||||| | | ||||| | || |||| | Sbjct 1954 ACAATTGTGGATTTGCAAGATGTCCTCGGGAGGTTCA-CTTTCGA--T-ACGGTCTTAAT 2009 Query 556 -CTGGTTACGGGTTGTGACT-CAAGTTCTCTTTCCATTGAAATGCCA-AAGAATG-AGTA 611 || | || ||| ||| | | || |||||||||||||||||| || || ||| | || Sbjct 2010 CCTTATAACCAGTTCTGA-TCCTAGATCTCTTTCCATTGAAATG-CATGAGGATGAATTA 2067 Query 612 TGCTAAAGCTATGGATGATGCTGAAGAAGTGG-TTGTGTACAGACATGTCAAGCCTGTGG 670 ||||||||| | || |||| || ||||| || || ||| || ||||| || || Sbjct 2068 -GCTAAAGCTCTCGACGATGTTGGAGAAG-GGATTTTGTTTAGGCATGTTAAACCAAAAT 2125 Query 671 TCTTGTGGAAGCTGCA-AAACTGGATTGGACTCGGAGAAGAGAAGAAGATGAAGGAAGCT 729 |||||||||||||||| ||| ||||| ||| | ||| | ||||||||||||| |||||| Sbjct 2126 TCTTGTGGAAGCTGCAGAAA-TGGATGGGATTGGGACACGAGAAGAAGATGACTGAAGCT 2184 Query 730 AATGCCGCTTTTGACAGAT-CTTGTGC-AAAGTATATATCTGCA-AAGAGGGAGGAGATA 786 ||||| |||||||| | | ||| || ||| |||||||| | | ||||| || ||||| Sbjct 2185 AATGCAACTTTTGACCG-TGTTTGCGCGAAA-TATATATCAG-ATAAGAGAGAAGAGATT 2241 Query 787 ATAAG-TCATC--A---TT-CTAATA-TT-GGA-GGAG-AAGCTCATGCAGAGGAT-TTA 834 || || ||| | | || | ||| || | |||| ||| |||| |||||| || Sbjct 2242 ATCAGATCA-CAAAGGTTTAATGATATTTCCTATGGAGAAAG-TCAT---GAGGATCTT- 2295 Query 835 TTAAGCGT-CTACATGAATCTAGATATTTCCAAGTATGAGCTTTTGAACCCAAACGATGA 893 || | | | || ||| || ||||||| ||||||| |||| ||||| | | || || Sbjct 2296 TT-ATCTTCCTTCATAAAGCTAGATACAACCAAGTACAAGCTCTTGAATTCGAGTGAAGA 2354 Query 894 TAACTTCCTTAAAGACATC-ATCAAGAG-TTTCATGCTTGCTGGAAGAGACGCCA-TTGC 950 ||| ||||| | ||||| | || | | | |||||| || || ||||| || | | || | Sbjct 2355 TAAGTTCCTCAGAGACA-CTATTATG-GCTTTCATTCTAGCGGGAAGGGATACAACTT-C 2411 Query 951 AACAACTCTCACTTGGTTCTTCTGGCTTCTCTCCAAGAA-CCCTGAAGCTG-TGACCAAG 1008 | |||||||||||||||||||||||||||| | || |||| ||| || |||||||| Sbjct 2412 CTCTGCTCTCACTTGGTTCTTCTGGCTTCTCTCTGA-AAGCCCTCAAG-TGGTGACCAAG 2469 Query 1009 ATCCGCCAAGAGATCAACA-CA-AA-TCTACCAG-GA-TCCGGAA-TGAGTTTAGATGCA 1062 || ||||||||||||| || || || |||| || || | |||| || | | | | | Sbjct 2470 ATTCGCCAAGAGATCATCAACATAAATCTATCAAAGAAT--GGAAATG-GCC-A-A-G-A 2522 Query 1063 GACAAGTTAAACAAGATGGTATATTTACATGGTGCATTGTGTGAATCACT-ACGCCTCTA 1121 || | ||| ||||| |||| ||||||||||||| ||||||||| || | | | ||||| Sbjct 2523 GA-AT-TTAGACAAGTTGGTGTATTTACATGGTGTGTTGTGTGAAGCAATGA-GACTCTA 2579 Query 1122 -CGCGCCAATC-CCGTTCGAGAGAAAGACTCCCAT-AAAGCAAGATGTGCTTCCAAGTGG 1178 | | ||| | || || | | | ||| || | || ||| || ||||||||||||||||| Sbjct 2580 TC-CACCAGTTTCCTTTGG-GCGCAAGTCTTCTATCAAATCA-GATGTGCTTCCAAGTGG 2636 Query 1179 ACACATG-GTCGATAA-AAATTGGAAGATTTTGTTCT-C-TGTCTATGCATTGGGGAGGA 1234 || | | || || | ||| | |||||| | ||| | | | | || |||||||||| Sbjct 2637 CCATA-GAGTAGA-AGCAAACTCTAAGATTATCATCTGCCT-TAAA-GCGTTGGGGAGGA 2692 Query 1235 TGAG-GTCCGTGTGGGGACAGGACGCGTCTG-AATTCAAACCAGAGAGATGGATCTCTGA 1292 |||| | | || |||||| | ||||| | || ||||||| |||||||||||| | ||||| Sbjct 2693 TGAGAG-CGGTTTGGGGAGATGACGCAT-TGGAATTCAAGCCAGAGAGATGGGTTTCTGA 2750 Query 1293 GAGAAATGGAGGCTTGAA-ACATGAACCATCTTTCAAGTTCTTCGT-GTTTAATTCTGGT 1350 || | ||| |||| || |||||| || || ||||||||||| | ||||| ||| ||| Sbjct 2751 GA-AG--GGAAGCTT-AAGACATGAGCCCTCCTTCAAGTTCTTA-TCGTTTATTTCCGGT 2805 Query 1351 CCAAGAAACT-G-CTTGGGGAAAA-ATTTATCTTT--CTTGCAGATGAAGACAGTAGCTG 1405 ||||||| || | || || |||| ||||| || | || || ||||||| || || | Sbjct 2806 CCAAGAA-CTTGTCTAGG--AAAACATTTAGCTATGACT--CAAATGAAGATGGTGGCCG 2860 Query 1406 TTGAGATCAT-ACGAA-ATTATGACATCAAGGTCGTTGAAGGGCACAAGATCGAGCCAGC 1463 | ||||| || || || | |||||||| ||||| || ||||||| ||||| ||||||| Sbjct 2861 TGGAGAT-ATTAC-AACACTATGACATTAAGGTTATTAAAGGGCAAAAGATTGAGCCAG- 2917 Query 1464 TTCTTCCATA-ATCCT-TCACATGAAACATGGCCTTAA-AGTCACAGTTTCTAAGAG 1517 ||||| | || | || |||||| ||||| |||| | ||||| || ||||||| Sbjct 2918 TTCTTGGTTTTATATTGTC-CATGAAGCATGGACTTAGGA-TCACAATTACTAAGAG 2972 > Ahg907906 jgi|Araly1|907906|Al_scaffold_0002_987 Length=1059 Score = 289 bits (156), Expect = 5e-77 Identities = 486/640 (76%), Gaps = 43/640 (7%) Strand=Plus/Plus Query 877 TTGAACCCAAACGATGATAACTTCCTTAAAGACATC-ATCAAGAGTTTCATGCTTGCTGG 935 ||||| |||| |||||||| ||| ||||||||| | || | ||||| || | | ||| Sbjct 430 TTGAAACCAAGTGATGATAAATTCATTAAAGACA-CTATTTTGGGTTTCTTGATAG-TGG 487 Query 936 -AAGAGACGCCATTGCAA---CAACTCTCACTTGGTTCTTCTGGCTTCTCTCCAAGAACC 991 ||||||| || ||| || ||||||||||||||||||||||||| |||||||||| Sbjct 488 CAAGAGAC-ACA--ACAAGTTCAGCTCTCACTTGGTTCTTCTGGCTTCTGTCCAAGAACC 544 Query 992 CTGAAGCTGTGACCAAGATCCGCCAAGAGATCAACACAAATCTACCAGGAT-CCGGAATG 1050 ||||||| ||| |||||| || |||||| | | || || | | ||| || | | | Sbjct 545 CTGAAGCAATGAACAAGATTCGACAAGAGGT-TA-AC-AA--GA--A-GATGCC-G-A-G 593 Query 1051 AGTTTAGATGCAGACA-AGTTAAACAAGATGGTATATTTACATGGTGCATTGTGTGA-AT 1108 |||| ||| | | || | ||| ||||| | || ||| |||| ||||| ||||||| | Sbjct 594 -GTTT-GATCCCG-CAGATTTAGACAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGA- 649 Query 1109 CACTACGCCTCTACGCGCCAATCCCGTTCGAGA-GA-AAGACTCCCATAAAGCAAGATGT 1166 | ||| | | ||| | ||| |||| || | | | ||| | || ||||| ||| || Sbjct 650 CGCTAAGGTTATACCCACCAGTCCCATT-TA-ACCACAAGTCACCGGCAAAGCCAGACGT 707 Query 1167 GCTTCCAAGTGGACACATGGTCGATAAAAATTGGAAGATTTTGTTCTCTGTCTATGCATT 1226 |||||||||||| || | |||||| | |||||||||||| | | ||| | |||||||| Sbjct 708 GCTTCCAAGTGGGCATAAAGTCGATGAGAATTGGAAGATTGTCATATCTATGTATGCATT 767 Query 1227 GGGGAGGATGAGGTCCGTGTGGGGACAGGACGCGTCTGAATTCAAACCAGAGAGATGGAT 1286 |||||||||| || || |||||| | |||||| || |||| ||||||||||||||| Sbjct 768 AGGGAGGATGAAATCTGTTTGGGGAGATGACGCGGAAGATTTCAGACCAGAGAGATGGAT 827 Query 1287 CTCTGAGAGAAATGG-AGGCTTGAAACATGAACCATC-TTTCAAGTTCTTCGTGTTTAAT 1344 | | | | | ||| ||| || ||||||||||| || | | |||||||| | |||||| Sbjct 828 -T-TCATA-CAGTGGAAGG-TTAAAACATGAACCTTCATAT-AAGTTCTTGGCGTTTAAC 882 Query 1345 TCTGGTCCAAGAAAC-TGCTTGGGGAAAAATTTATCTTTCTTGCAGATGAAGACAGTAGC 1403 |||||||||| | | |||||||| ||||| ||| | |||||||||||||||||||| || Sbjct 883 GCTGGTCCAAG-AGCTTGCTTGGGAAAAAAGTTAACGTTCTTGCAGATGAAGACAGTGGC 941 Query 1404 TGTTGAGATCATACGAAATTATGACATCAAGGTCGTTGAAGGGCACAAGATCGAGCCAGC 1463 ||| || ||||||||||| ||||||||||||||||||||||||||||| | ||| || | Sbjct 942 TGTGGAAATCATACGAAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAACCTG- 1000 Query 1464 TTC-TTCCATAATCCTTCACATGAAACATGGCCTTAAAGT 1502 ||| ||| | | ||| |||| ||||||| || ||||| Sbjct 1001 TTCCTTCTGTTCTTTTTCGCATGCAACATGGTCTCAAAGT 1040 > Ahg338681 jgi|Araly1|338681|fgenesh1_pg.C_scaffold_2000780 Length=771 Score = 276 bits (149), Expect = 4e-73 Identities = 426/556 (77%), Gaps = 33/556 (6%) Strand=Plus/Plus Query 956 CTCTCACTTGGTTCTTCTGGCTTCTCTCCAAGAACCCTGAAGCTGTGACCAAGATCCGCC 1015 ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| || | Sbjct 221 CTCTCACTTGGTTCTTCTGGCTTCTGTCCAAGAACCCTGAAGCAATGAACAAGATTCGAC 280 Query 1016 AAGAGATCAACACAAATCTACCAGGAT-CCGGAATGAGTTTAGATGCAGACA-AGTTAAA 1073 ||||| | | || || | | ||| || | | | |||| ||| | | || | ||| | Sbjct 281 AAGAGGT-TA-AC-AA--GA--A-GATGCC-G-A-G-GTTT-GATCCCG-CAGATTTAGA 326 Query 1074 CAAGATGGTATATTTACATGGTGCATTGTGTGA-ATCACTACGCCTCTACGCGCCAATCC 1132 |||| | || ||| |||| ||||| ||||||| | | ||| | | ||| | ||| ||| Sbjct 327 CAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGA-CGCTAAGGTTATACCCACCAGTCC 385 Query 1133 CGTTCGAGA-GA-AAGACTCCCATAAAGCAAGATGTGCTTCCAAGTGGACACATGGTCGA 1190 | || | | | ||| | || ||||| ||| |||||||||||||| || | ||||| Sbjct 386 CATT-TA-ACCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGGGCATAAAGTCGA 443 Query 1191 TAAAAATTGGAAGATTTTGTTCTCTGTCTATGCATTGGGGAGGATGAGGTCCGTGTGGGG 1250 | | |||||||||||| | | ||| | |||||||| |||||||||| || || ||||| Sbjct 444 TGAGAATTGGAAGATTGTCATATCTATGTATGCATTAGGGAGGATGAAATCTGTTTGGGG 503 Query 1251 ACAGGACGCGTCTGAATTCAAACCAGAGAGATGGATCTCTGAGAGAAATGG-AGGCTTGA 1309 | | |||||| || |||| ||||||||||||||| | | | | | ||| ||| || | Sbjct 504 AGATGACGCGGAAGATTTCAGACCAGAGAGATGGAT-T-TCATA-CAGTGGAAGG-TTAA 559 Query 1310 AACATGAACCATC-TTTCAAGTTCTTCGTGTTTAATTCTGGTCCAAGAAAC-TGCTTGGG 1367 |||||||||| || | | |||||||| | |||||| |||||||||| | | |||||||| Sbjct 560 AACATGAACCTTCATAT-AAGTTCTTGGCGTTTAACGCTGGTCCAAG-AGCTTGCTTGGG 617 Query 1368 GAAAAATTTATCTTTCTTGCAGATGAAGACAGTAGCTGTTGAGATCATACGAAATTATGA 1427 ||||| ||| | |||||||||||||||||||| |||| || ||||||||||| ||||| Sbjct 618 AAAAAAGTTAACGTTCTTGCAGATGAAGACAGTGGCTGCGGAAATCATACGAAACTATGA 677 Query 1428 CATCAAGGTCGTTGAAGGGCACAAGATCGAGCCAGCTTC-TTCCATAATCCTTCACATGA 1486 |||||||||||||||||||||||| | ||| || | ||| ||| | | ||| |||| Sbjct 678 CATCAAGGTCGTTGAAGGGCACAAAACCGAACCTG-TTCCTTCTGTTCTTTTTCGCATGC 736 Query 1487 AACATGGCCTTAAAGT 1502 ||||||| || ||||| Sbjct 737 AACATGGTCTCAAAGT 752 > Ahg925517 jgi|Araly1|925517|scaffold_201078.1 Length=671 Score = 270 bits (146), Expect = 2e-71 Identities = 425/556 (76%), Gaps = 33/556 (6%) Strand=Plus/Plus Query 956 CTCTCACTTGGTTCTTCTGGCTTCTCTCCAAGAACCCTGAAGCTGTGACCAAGATCCGCC 1015 ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| || | Sbjct 101 CTCTCACTTGGTTCTTCTGGCTTCTGTCCAAGAACCCTGAAGCAATGAACAAGATTCGAC 160 Query 1016 AAGAGATCAACACAAATCTACCAGGAT-CCGGAATGAGTTTAGATGCAGACA-AGTTAAA 1073 ||||| | | || || | | ||| || | | | |||| ||| | | || | ||| | Sbjct 161 AAGAGGT-TA-AC-AA--GA--A-GATGCC-G-A-G-GTTT-GATCCCG-CAGATTTAGA 206 Query 1074 CAAGATGGTATATTTACATGGTGCATTGTGTGA-ATCACTACGCCTCTACGCGCCAATCC 1132 |||| | || ||| |||| ||||| ||||||| | | ||| | | ||| | ||| ||| Sbjct 207 CAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGA-CGCTAAGGTTATACCCACCAGTCC 265 Query 1133 CGTTCGAGA-GA-AAGACTCCCATAAAGCAAGATGTGCTTCCAAGTGGACACATGGTCGA 1190 | || | | | ||| | || ||||| ||| |||||||||||||| || | ||||| Sbjct 266 CATT-TA-ACCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGGGCATAAAGTCGA 323 Query 1191 TAAAAATTGGAAGATTTTGTTCTCTGTCTATGCATTGGGGAGGATGAGGTCCGTGTGGGG 1250 | | |||||||||||| | | ||| | |||||||| |||||||||| || || ||||| Sbjct 324 TGAGAATTGGAAGATTGTCATATCTATGTATGCATTAGGGAGGATGAAATCTGTTTGGGG 383 Query 1251 ACAGGACGCGTCTGAATTCAAACCAGAGAGATGGATCTCTGAGAGAAATGG-AGGCTTGA 1309 | | |||||| || |||| ||||||||||||||| | | | | | ||| ||| || | Sbjct 384 AGATGACGCGGAAGATTTCAGACCAGAGAGATGGAT-T-TCATA-CAGTGGAAGG-TTAA 439 Query 1310 AACATGAACCATC-TTTCAAGTTCTTCGTGTTTAATTCTGGTCCAAGAAAC-TGCTTGGG 1367 |||| ||||| || | | |||||||| | |||||| |||||||||| | | |||||||| Sbjct 440 AACAAGAACCTTCATAT-AAGTTCTTGGCGTTTAACGCTGGTCCAAG-AGCTTGCTTGGG 497 Query 1368 GAAAAATTTATCTTTCTTGCAGATGAAGACAGTAGCTGTTGAGATCATACGAAATTATGA 1427 ||||| ||| | |||||||||||||||||||| |||| || ||||||||||| ||||| Sbjct 498 AAAAAAGTTAACGTTCTTGCAGATGAAGACAGTGGCTGCGGAAATCATACGAAACTATGA 557 Query 1428 CATCAAGGTCGTTGAAGGGCACAAGATCGAGCCAGCTTC-TTCCATAATCCTTCACATGA 1486 |||||||||||||||||||||||| | ||| || | ||| ||| | | ||| |||| Sbjct 558 CATCAAGGTCGTTGAAGGGCACAAAACCGAACCTG-TTCCTTCTGTTCTTTTTCGCATGC 616 Query 1487 AACATGGCCTTAAAGT 1502 ||||||| || ||||| Sbjct 617 AACATGGTCTCAAAGT 632 > Ahg475591 jgi|Araly1|475591|fgenesh2_kg.2__721__AT1G65340.1 Length=1380 Score = 121 bits (65), Expect = 2e-26 Identities = 123/151 (81%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 1354 AGAAAC-TGCTTGGGGAAAAATTTATCTTTCTTGCAGATGAAGACAGTAGCTGTTGAGAT 1412 |||| | |||||||| ||||| ||| | ||||||||||||||||| || |||| || || Sbjct 1212 AGAAGCTTGCTTGGGAAAAAAGTTAACGTTCTTGCAGATGAAGACCGTGGCTGCGGAAAT 1271 Query 1413 CATACGAAATTATGACATCAAGGTCGTTGAAGGGCACAAGATCGAGCCAGCTTC-TTCCA 1471 ||||||||| ||||||||||||||||||||||||||||| | ||| || | ||| ||| Sbjct 1272 CATACGAAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAACCTG-TTCCTTCTG 1330 Query 1472 TAATCCTTCACATGAAACATGGCCTTAAAGT 1502 | | ||| |||| ||||||| || ||||| Sbjct 1331 TTCTTTTTCGCATGCAACATGGTCTCAAAGT 1361 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57401999215 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5