BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G21910.1
Length=1533
Score E
Sequences producing significant alignments: (Bits) Value
Ahg932132 jgi|Araly1|932132|scaffold_400120.1 2300 0.0
Ahg352944 jgi|Araly1|352944|fgenesh1_pg.C_scaffold_7000117 381 8e-105
Ahg907906 jgi|Araly1|907906|Al_scaffold_0002_987 289 5e-77
Ahg338681 jgi|Araly1|338681|fgenesh1_pg.C_scaffold_2000780 276 4e-73
Ahg925517 jgi|Araly1|925517|scaffold_201078.1 270 2e-71
Ahg475591 jgi|Araly1|475591|fgenesh2_kg.2__721__AT1G65340.1 121 2e-26
> Ahg932132 jgi|Araly1|932132|scaffold_400120.1
Length=1574
Score = 2300 bits (1245), Expect = 0.0
Identities = 1443/1539 (94%), Gaps = 12/1539 (1%)
Strand=Plus/Plus
Query 1 ATGGCTTACGTAGGCTTAGTTGAAGTCTTTATTGCCTTACTTGTCTTTTTCTTCTTCCAT 60
|||||||||||||||||| ||||||||||||| || || ||||||||| |||||||||||
Sbjct 21 ATGGCTTACGTAGGCTTACTTGAAGTCTTTATAGCTTTTCTTGTCTTTATCTTCTTCCAT 80
Query 61 TTCTTGATCCACAAGAAATCTCATCAAATCACACCTAGAAACTGGCCAGTTCTTGGGATG 120
|||||||||||||||||| | ||||| ||| ||||||||||||||||||||||||||||
Sbjct 81 TTCTTGATCCACAAGAAAGCCCATCATATCTTACCTAGAAACTGGCCAGTTCTTGGGATG 140
Query 121 CTTCCTGGTGTCCT-TGTCATGCTTCACAGGATCAATGACTATGTCGCGGAGATTCTTGA 179
||||||||||| || | |||||||||||| ||| |||||||| ||||| |||||||| ||
Sbjct 141 CTTCCTGGTGTGCTCT-TCATGCTTCACATGATTAATGACTACGTCGCAGAGATTCTCGA 199
Query 180 GGTCTCCAACTTGACATTTGCCTTCAAAGGCCCATGGTTCTCTGGAATGAACATGTTGAT 239
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 200 GGTCTCCAACTTGACTTTTGCCTTCAAAGGCCCATGGTTCACTGGAATGAACATGTTGAT 259
Query 240 CACTGCAGATCCTTCAAATATTCAACACGTTTTCAGCTCCAACTTCTCCAATTACGACAA 299
||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || ||
Sbjct 260 CACTGCAGATCCTGCAAATATTCAACACGTTTTCTGCTCCAACTTCTCCAATTATGATAA 319
Query 300 AGGACCGGAGTTCAAAGAGATGTTTGATTTTCTAGGAAATGGGATCTTCACTGCTGACTC 359
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 320 AGGACCGGAGTTCAAAGAGATGTTCGATTTTCTAGGAAATGGGATCTTCACTGCTGACTC 379
Query 360 CAAACTATGGGAGGATATGAGGAAATCCGCATTGGTTGTGCTTAGCCATCAAGGGTTTCA 419
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 380 CAAACTCTGGGAGGATATGAGGAAATCCGCACTGGTTGTGCTTAGCCATCAAGGGTTTCA 439
Query 420 AAGCTTCTCATTGAGGACCATCACGTGTAAAATCAAGAACGGGCTTGTCCCCGTTCTTGA 479
||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||
Sbjct 440 AAGCTTCTCATTGAGGACCATCACGCGTAAAATCAAGAATGGGCTTGTCCCGGTTCTTGA 499
Query 480 TCATTTTGCGGAGGCTAATACGGTTTTCGATTTACAAGACGTGTTCCAGAGGTTAGCATT 539
||||||| | ||||| |||||||||||||||||||||||||||||||| || ||||||||
Sbjct 500 TCATTTTTCAGAGGCGAATACGGTTTTCGATTTACAAGACGTGTTCCAAAGATTAGCATT 559
Query 540 CGATGTAACCCTTACTCTGGTTACGGGTTGTGACTCAAGTTCTCTTTCCATTGAAATGCC 599
|||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||||
Sbjct 560 CGATGTAACCCTTACTCTTGTTACGGGTTATGACTCGAGTTCTCTTTCCATAGAAATGCC 619
Query 600 AAAGAATGAGTATGCTAAAGCTATGGATGATGCTGAAGAAGTGGTTGTGTACAGACATGT 659
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 620 GAAGAATGAGTATGCGAAAGCTATGGATGATGCTGAAGAAGTGGTTGTGTATAGACATGT 679
Query 660 CAAGCCTGTGGTCTTGTGGAAGCTGCAAAACTGGATTGGACTCGGAGAAGAGAAGAAGAT 719
|||||| || ||||||||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct 680 TAAGCCTCTGATCTTGTGGAAGTTGCAAAACTGGTTTGGACTCGGACAAGAGAAGAAGAT 739
Query 720 GA-AGGAAGCTAATGCCGCTTTTGACAGATCTTGTGCAAAGTATATATCTGCAAAGAGGG 778
|| | |||||||||| ||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 740 GACA-AAAGCTAATGCTGCTTTCGACAGATCTTGTGCAAAGTATATATCTGCAAAGAGAG 798
Query 779 AGGAGATAATAAGTCATCATTCTAATATTGGAGGAGAAGCTCATGCAGAGGATTTATTAA 838
||||||||||||||||||||||||||||||| ||| |||||| || ||||||||||||||
Sbjct 799 AGGAGATAATAAGTCATCATTCTAATATTGGGGGAAAAGCTCGTGAAGAGGATTTATTAA 858
Query 839 GCGTCTACATGAATCTAGATATTTCCAAGTATGAGCTTTTGAACCCA-AACGATGATAAC 897
||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||
Sbjct 859 GCGTCTACATGAATCTAGATACTTCCAAGTATGAGCTTTTGAACCCAGAA-GATGATAAC 917
Query 898 TTCCTTAAAGACATCATCAAGAGTTTCATGCTTGCTGGAAGAGACGCCATTGCAACAACT 957
||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 918 TTCCTCAAAGACATCATCAAGAGTTTCATGCTCGCCGGAAGAGACGCCATTGCAACAACT 977
Query 958 CTCACTTGGTTCT-TCTGGCTTCTCTCCAAGAACCCTGAAGCTGTGACCAAGATCCGCCA 1016
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 978 CTCACTTGGTTCTGT-TGGCTTCTCTCCAAGAACCCTGAAGCTGTGACCAAGATCCGCCA 1036
Query 1017 AGAGATCAACACAAATCTACCAGGATCCGGAATGAGTTTAGATGCAGACAAGTTAAACAA 1076
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1037 AGAGATCAACACAAATCTACCAGGATCCGGAATGAGTTTAGATGCAGACATGTTAAACAA 1096
Query 1077 GATGGTATATTTACATGGTGCATTGTGTGAATCACTACGCCTCTACGCGCCAATCCCGTT 1136
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1097 GATGGTGTATTTACATGGTGCATTGTGTGAATCACTACGCCTCTACGCTCCAATCCCATT 1156
Query 1137 CGAGAGAAAGACTCCCATAAAGCAAGATGTGCTTCCAAGTGGACACATGGTCGATAAAAA 1196
|||| |||||||||||||||| ||||||||||||||||||||||||| |||||| |||
Sbjct 1157 CGAGCGAAAGACTCCCATAAAACAAGATGTGCTTCCAAGTGGACACAAAGTCGATGCAAA 1216
Query 1197 TTGGAAGATTTTGTTCTCTGTCTATGCATTGGGGAGGATGA-GGTCCGTGTGGGGACAGG 1255
||||||||||||||||||||||||||||||||||||||||| || | ||||||||| | |
Sbjct 1217 TTGGAAGATTTTGTTCTCTGTCTATGCATTGGGGAGGATGAAGG-CTGTGTGGGGAGAAG 1275
Query 1256 ACGCGTCTGAATTCAAACCAGAGAGATGGATCTCTGAGAGAAATGGAGGCTTGAAA-CAT 1314
|||| | |||||||||||||||||||||||| |||||||||||||||||||| ||| |||
Sbjct 1276 ACGCATGTGAATTCAAACCAGAGAGATGGATTTCTGAGAGAAATGGAGGCTT-AAAGCAT 1334
Query 1315 GAACCATCTTTCAAGTTCTTCGTGTTTAATTCTGGTCCAAGAAACTGCTTGGGGAAAAAT 1374
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 1335 GAACCATCTTTCAAGTTCTTCGTGTTTAATTCTGGTCCAAGAAATTGCTTGGGGAAAAGT 1394
Query 1375 TTATCTTTCTTGCAGATGAAGACAGTAGCTGTTGAGATCATACGAAATTATGACATCAAG 1434
|||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||
Sbjct 1395 TTATCTTTCTTGCAGATGAAGACAGTGGCTATTGAGATTATACGAAATTATGACATCAAG 1454
Query 1435 GTCGTTGAAGGGCACAAGATCGAGCCAGCTTCTTCCATAATCCTTCACATGAAACATGGC 1494
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1455 GTCGTTGAAGGGCACAAGATCGAGCCAGCTTCTTCCATAGTCCTTCACATGAAACATGGC 1514
Query 1495 CTTAAAGTCACAGTTTCTAAGAGAGGCTTGGTTTCATAA 1533
|| |||||||||||| |||||||| ||||||| ||||||
Sbjct 1515 CTCAAAGTCACAGTTGCTAAGAGATGCTTGGTCTCATAA 1553
> Ahg352944 jgi|Araly1|352944|fgenesh1_pg.C_scaffold_7000117
Length=2985
Score = 381 bits (206), Expect = 8e-105
Identities = 1091/1497 (73%), Gaps = 146/1497 (10%)
Strand=Plus/Plus
Query 94 CCTAGAAACTGGCCAGTTCTTGGGATGCT-TCCTGGTGTCCTTGTC-ATGCTTCACAGGA 151
||||| |||||||| ||||| || ||||| ||| || | || | | |||| | | |||
Sbjct 1549 CCTAGGAACTGGCCGGTTCTCGGTATGCTCCCCT-GTCTGCTCG-CGGTGCTCCGCCGGA 1606
Query 152 TCAATGACTATGTCGCGGAGATTCTTGAGGTCTCCAACTTGACATTTGCCTTCAAAGG-C 210
|| |||||||| ||| ||||||||||| ||||| | ||||||||| | ||||| || |
Sbjct 1607 TCTATGACTATATCGTTGAGATTCTTGAAATCTCCGATTTGACATTTTCATTCAAGGGAC 1666
Query 211 C-CATGGTTCTCTGGAATGAACATGTTGATCACTGCAGATCCTTCAAATATTCAACACGT 269
| | | |||| |||||||| | |||||| |||| | |||||| | || ||||| || |
Sbjct 1667 CGC-T-GTTCGCTGGAATGGATATGTTGCTCACGGTTGATCCTGCTAACATTCATCATAT 1724
Query 270 TTTCAGCTCCAACTTCTCCAATTACGA-CAAAGGACCGGAGTTCAAAG-AGATGTTTGAT 327
| | ||| |||||||| |||||| | ||||||| | || ||||||| || | ||||||
Sbjct 1725 AATGAACTCAAACTTCTCAAATTAC-ATCAAAGGATCTGACTTCAAAGAAG-TTTTTGAT 1782
Query 328 -TTTCTAGGAAATGGGATCT-TCACTGCTGACTCCAAACTATGGGAGGATATGAGGAAAT 385
||| | ||| | || || | |||| | ||||| | |||||| || || ||||||| |
Sbjct 1783 GTTT-TTGGAGACGGAAT-TATCACCACAGACTCTGATCTATGGAAGAATCTGAGGAAGT 1840
Query 386 CCGCAT-TGGTTGTGCT-TAGCCATCAAGGGTTTC-AAAGCTTCTCATTGAGGACCATCA 442
| || | |||| | ||||||| ||||| |||| || |||||||| |||| ||
Sbjct 1841 -CTTATCAAGCAATGCTCCA-TCATCAAGCGTTTCAAAAG-TTTTCATTGAGTACCA-CA 1896
Query 443 CG-TGTAAAATCAAGAACGGGCTTG-TCCCCGTTCTTGATCATTTTGCGGAGGCTAA--T 498
| ||||| ||| | ||||||||| ||| | ||||| |||||||||| |||| ||
Sbjct 1897 AGAAGTAAACTCATGGACGGGCTTGTTCCTC-TTCTTAATCATTTTGCAGAGG--AAGGA 1953
Query 499 ACGGTTTTCGATTTACAAGACGTGTTCCAGAGGTT-AGCATTCGATGTAAC--CCTTACT 555
|| || | ||||| ||||| || || |||||| | | ||||| | || |||| |
Sbjct 1954 ACAATTGTGGATTTGCAAGATGTCCTCGGGAGGTTCA-CTTTCGA--T-ACGGTCTTAAT 2009
Query 556 -CTGGTTACGGGTTGTGACT-CAAGTTCTCTTTCCATTGAAATGCCA-AAGAATG-AGTA 611
|| | || ||| ||| | | || |||||||||||||||||| || || ||| | ||
Sbjct 2010 CCTTATAACCAGTTCTGA-TCCTAGATCTCTTTCCATTGAAATG-CATGAGGATGAATTA 2067
Query 612 TGCTAAAGCTATGGATGATGCTGAAGAAGTGG-TTGTGTACAGACATGTCAAGCCTGTGG 670
||||||||| | || |||| || ||||| || || ||| || ||||| || ||
Sbjct 2068 -GCTAAAGCTCTCGACGATGTTGGAGAAG-GGATTTTGTTTAGGCATGTTAAACCAAAAT 2125
Query 671 TCTTGTGGAAGCTGCA-AAACTGGATTGGACTCGGAGAAGAGAAGAAGATGAAGGAAGCT 729
|||||||||||||||| ||| ||||| ||| | ||| | ||||||||||||| ||||||
Sbjct 2126 TCTTGTGGAAGCTGCAGAAA-TGGATGGGATTGGGACACGAGAAGAAGATGACTGAAGCT 2184
Query 730 AATGCCGCTTTTGACAGAT-CTTGTGC-AAAGTATATATCTGCA-AAGAGGGAGGAGATA 786
||||| |||||||| | | ||| || ||| |||||||| | | ||||| || |||||
Sbjct 2185 AATGCAACTTTTGACCG-TGTTTGCGCGAAA-TATATATCAG-ATAAGAGAGAAGAGATT 2241
Query 787 ATAAG-TCATC--A---TT-CTAATA-TT-GGA-GGAG-AAGCTCATGCAGAGGAT-TTA 834
|| || ||| | | || | ||| || | |||| ||| |||| |||||| ||
Sbjct 2242 ATCAGATCA-CAAAGGTTTAATGATATTTCCTATGGAGAAAG-TCAT---GAGGATCTT- 2295
Query 835 TTAAGCGT-CTACATGAATCTAGATATTTCCAAGTATGAGCTTTTGAACCCAAACGATGA 893
|| | | | || ||| || ||||||| ||||||| |||| ||||| | | || ||
Sbjct 2296 TT-ATCTTCCTTCATAAAGCTAGATACAACCAAGTACAAGCTCTTGAATTCGAGTGAAGA 2354
Query 894 TAACTTCCTTAAAGACATC-ATCAAGAG-TTTCATGCTTGCTGGAAGAGACGCCA-TTGC 950
||| ||||| | ||||| | || | | | |||||| || || ||||| || | | || |
Sbjct 2355 TAAGTTCCTCAGAGACA-CTATTATG-GCTTTCATTCTAGCGGGAAGGGATACAACTT-C 2411
Query 951 AACAACTCTCACTTGGTTCTTCTGGCTTCTCTCCAAGAA-CCCTGAAGCTG-TGACCAAG 1008
| |||||||||||||||||||||||||||| | || |||| ||| || ||||||||
Sbjct 2412 CTCTGCTCTCACTTGGTTCTTCTGGCTTCTCTCTGA-AAGCCCTCAAG-TGGTGACCAAG 2469
Query 1009 ATCCGCCAAGAGATCAACA-CA-AA-TCTACCAG-GA-TCCGGAA-TGAGTTTAGATGCA 1062
|| ||||||||||||| || || || |||| || || | |||| || | | | | |
Sbjct 2470 ATTCGCCAAGAGATCATCAACATAAATCTATCAAAGAAT--GGAAATG-GCC-A-A-G-A 2522
Query 1063 GACAAGTTAAACAAGATGGTATATTTACATGGTGCATTGTGTGAATCACT-ACGCCTCTA 1121
|| | ||| ||||| |||| ||||||||||||| ||||||||| || | | | |||||
Sbjct 2523 GA-AT-TTAGACAAGTTGGTGTATTTACATGGTGTGTTGTGTGAAGCAATGA-GACTCTA 2579
Query 1122 -CGCGCCAATC-CCGTTCGAGAGAAAGACTCCCAT-AAAGCAAGATGTGCTTCCAAGTGG 1178
| | ||| | || || | | | ||| || | || ||| || |||||||||||||||||
Sbjct 2580 TC-CACCAGTTTCCTTTGG-GCGCAAGTCTTCTATCAAATCA-GATGTGCTTCCAAGTGG 2636
Query 1179 ACACATG-GTCGATAA-AAATTGGAAGATTTTGTTCT-C-TGTCTATGCATTGGGGAGGA 1234
|| | | || || | ||| | |||||| | ||| | | | | || ||||||||||
Sbjct 2637 CCATA-GAGTAGA-AGCAAACTCTAAGATTATCATCTGCCT-TAAA-GCGTTGGGGAGGA 2692
Query 1235 TGAG-GTCCGTGTGGGGACAGGACGCGTCTG-AATTCAAACCAGAGAGATGGATCTCTGA 1292
|||| | | || |||||| | ||||| | || ||||||| |||||||||||| | |||||
Sbjct 2693 TGAGAG-CGGTTTGGGGAGATGACGCAT-TGGAATTCAAGCCAGAGAGATGGGTTTCTGA 2750
Query 1293 GAGAAATGGAGGCTTGAA-ACATGAACCATCTTTCAAGTTCTTCGT-GTTTAATTCTGGT 1350
|| | ||| |||| || |||||| || || ||||||||||| | ||||| ||| |||
Sbjct 2751 GA-AG--GGAAGCTT-AAGACATGAGCCCTCCTTCAAGTTCTTA-TCGTTTATTTCCGGT 2805
Query 1351 CCAAGAAACT-G-CTTGGGGAAAA-ATTTATCTTT--CTTGCAGATGAAGACAGTAGCTG 1405
||||||| || | || || |||| ||||| || | || || ||||||| || || |
Sbjct 2806 CCAAGAA-CTTGTCTAGG--AAAACATTTAGCTATGACT--CAAATGAAGATGGTGGCCG 2860
Query 1406 TTGAGATCAT-ACGAA-ATTATGACATCAAGGTCGTTGAAGGGCACAAGATCGAGCCAGC 1463
| ||||| || || || | |||||||| ||||| || ||||||| ||||| |||||||
Sbjct 2861 TGGAGAT-ATTAC-AACACTATGACATTAAGGTTATTAAAGGGCAAAAGATTGAGCCAG- 2917
Query 1464 TTCTTCCATA-ATCCT-TCACATGAAACATGGCCTTAA-AGTCACAGTTTCTAAGAG 1517
||||| | || | || |||||| ||||| |||| | ||||| || |||||||
Sbjct 2918 TTCTTGGTTTTATATTGTC-CATGAAGCATGGACTTAGGA-TCACAATTACTAAGAG 2972
> Ahg907906 jgi|Araly1|907906|Al_scaffold_0002_987
Length=1059
Score = 289 bits (156), Expect = 5e-77
Identities = 486/640 (76%), Gaps = 43/640 (7%)
Strand=Plus/Plus
Query 877 TTGAACCCAAACGATGATAACTTCCTTAAAGACATC-ATCAAGAGTTTCATGCTTGCTGG 935
||||| |||| |||||||| ||| ||||||||| | || | ||||| || | | |||
Sbjct 430 TTGAAACCAAGTGATGATAAATTCATTAAAGACA-CTATTTTGGGTTTCTTGATAG-TGG 487
Query 936 -AAGAGACGCCATTGCAA---CAACTCTCACTTGGTTCTTCTGGCTTCTCTCCAAGAACC 991
||||||| || ||| || ||||||||||||||||||||||||| ||||||||||
Sbjct 488 CAAGAGAC-ACA--ACAAGTTCAGCTCTCACTTGGTTCTTCTGGCTTCTGTCCAAGAACC 544
Query 992 CTGAAGCTGTGACCAAGATCCGCCAAGAGATCAACACAAATCTACCAGGAT-CCGGAATG 1050
||||||| ||| |||||| || |||||| | | || || | | ||| || | | |
Sbjct 545 CTGAAGCAATGAACAAGATTCGACAAGAGGT-TA-AC-AA--GA--A-GATGCC-G-A-G 593
Query 1051 AGTTTAGATGCAGACA-AGTTAAACAAGATGGTATATTTACATGGTGCATTGTGTGA-AT 1108
|||| ||| | | || | ||| ||||| | || ||| |||| ||||| ||||||| |
Sbjct 594 -GTTT-GATCCCG-CAGATTTAGACAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGA- 649
Query 1109 CACTACGCCTCTACGCGCCAATCCCGTTCGAGA-GA-AAGACTCCCATAAAGCAAGATGT 1166
| ||| | | ||| | ||| |||| || | | | ||| | || ||||| ||| ||
Sbjct 650 CGCTAAGGTTATACCCACCAGTCCCATT-TA-ACCACAAGTCACCGGCAAAGCCAGACGT 707
Query 1167 GCTTCCAAGTGGACACATGGTCGATAAAAATTGGAAGATTTTGTTCTCTGTCTATGCATT 1226
|||||||||||| || | |||||| | |||||||||||| | | ||| | ||||||||
Sbjct 708 GCTTCCAAGTGGGCATAAAGTCGATGAGAATTGGAAGATTGTCATATCTATGTATGCATT 767
Query 1227 GGGGAGGATGAGGTCCGTGTGGGGACAGGACGCGTCTGAATTCAAACCAGAGAGATGGAT 1286
|||||||||| || || |||||| | |||||| || |||| |||||||||||||||
Sbjct 768 AGGGAGGATGAAATCTGTTTGGGGAGATGACGCGGAAGATTTCAGACCAGAGAGATGGAT 827
Query 1287 CTCTGAGAGAAATGG-AGGCTTGAAACATGAACCATC-TTTCAAGTTCTTCGTGTTTAAT 1344
| | | | | ||| ||| || ||||||||||| || | | |||||||| | ||||||
Sbjct 828 -T-TCATA-CAGTGGAAGG-TTAAAACATGAACCTTCATAT-AAGTTCTTGGCGTTTAAC 882
Query 1345 TCTGGTCCAAGAAAC-TGCTTGGGGAAAAATTTATCTTTCTTGCAGATGAAGACAGTAGC 1403
|||||||||| | | |||||||| ||||| ||| | |||||||||||||||||||| ||
Sbjct 883 GCTGGTCCAAG-AGCTTGCTTGGGAAAAAAGTTAACGTTCTTGCAGATGAAGACAGTGGC 941
Query 1404 TGTTGAGATCATACGAAATTATGACATCAAGGTCGTTGAAGGGCACAAGATCGAGCCAGC 1463
||| || ||||||||||| ||||||||||||||||||||||||||||| | ||| || |
Sbjct 942 TGTGGAAATCATACGAAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAACCTG- 1000
Query 1464 TTC-TTCCATAATCCTTCACATGAAACATGGCCTTAAAGT 1502
||| ||| | | ||| |||| ||||||| || |||||
Sbjct 1001 TTCCTTCTGTTCTTTTTCGCATGCAACATGGTCTCAAAGT 1040
> Ahg338681 jgi|Araly1|338681|fgenesh1_pg.C_scaffold_2000780
Length=771
Score = 276 bits (149), Expect = 4e-73
Identities = 426/556 (77%), Gaps = 33/556 (6%)
Strand=Plus/Plus
Query 956 CTCTCACTTGGTTCTTCTGGCTTCTCTCCAAGAACCCTGAAGCTGTGACCAAGATCCGCC 1015
||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| || |
Sbjct 221 CTCTCACTTGGTTCTTCTGGCTTCTGTCCAAGAACCCTGAAGCAATGAACAAGATTCGAC 280
Query 1016 AAGAGATCAACACAAATCTACCAGGAT-CCGGAATGAGTTTAGATGCAGACA-AGTTAAA 1073
||||| | | || || | | ||| || | | | |||| ||| | | || | ||| |
Sbjct 281 AAGAGGT-TA-AC-AA--GA--A-GATGCC-G-A-G-GTTT-GATCCCG-CAGATTTAGA 326
Query 1074 CAAGATGGTATATTTACATGGTGCATTGTGTGA-ATCACTACGCCTCTACGCGCCAATCC 1132
|||| | || ||| |||| ||||| ||||||| | | ||| | | ||| | ||| |||
Sbjct 327 CAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGA-CGCTAAGGTTATACCCACCAGTCC 385
Query 1133 CGTTCGAGA-GA-AAGACTCCCATAAAGCAAGATGTGCTTCCAAGTGGACACATGGTCGA 1190
| || | | | ||| | || ||||| ||| |||||||||||||| || | |||||
Sbjct 386 CATT-TA-ACCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGGGCATAAAGTCGA 443
Query 1191 TAAAAATTGGAAGATTTTGTTCTCTGTCTATGCATTGGGGAGGATGAGGTCCGTGTGGGG 1250
| | |||||||||||| | | ||| | |||||||| |||||||||| || || |||||
Sbjct 444 TGAGAATTGGAAGATTGTCATATCTATGTATGCATTAGGGAGGATGAAATCTGTTTGGGG 503
Query 1251 ACAGGACGCGTCTGAATTCAAACCAGAGAGATGGATCTCTGAGAGAAATGG-AGGCTTGA 1309
| | |||||| || |||| ||||||||||||||| | | | | | ||| ||| || |
Sbjct 504 AGATGACGCGGAAGATTTCAGACCAGAGAGATGGAT-T-TCATA-CAGTGGAAGG-TTAA 559
Query 1310 AACATGAACCATC-TTTCAAGTTCTTCGTGTTTAATTCTGGTCCAAGAAAC-TGCTTGGG 1367
|||||||||| || | | |||||||| | |||||| |||||||||| | | ||||||||
Sbjct 560 AACATGAACCTTCATAT-AAGTTCTTGGCGTTTAACGCTGGTCCAAG-AGCTTGCTTGGG 617
Query 1368 GAAAAATTTATCTTTCTTGCAGATGAAGACAGTAGCTGTTGAGATCATACGAAATTATGA 1427
||||| ||| | |||||||||||||||||||| |||| || ||||||||||| |||||
Sbjct 618 AAAAAAGTTAACGTTCTTGCAGATGAAGACAGTGGCTGCGGAAATCATACGAAACTATGA 677
Query 1428 CATCAAGGTCGTTGAAGGGCACAAGATCGAGCCAGCTTC-TTCCATAATCCTTCACATGA 1486
|||||||||||||||||||||||| | ||| || | ||| ||| | | ||| ||||
Sbjct 678 CATCAAGGTCGTTGAAGGGCACAAAACCGAACCTG-TTCCTTCTGTTCTTTTTCGCATGC 736
Query 1487 AACATGGCCTTAAAGT 1502
||||||| || |||||
Sbjct 737 AACATGGTCTCAAAGT 752
> Ahg925517 jgi|Araly1|925517|scaffold_201078.1
Length=671
Score = 270 bits (146), Expect = 2e-71
Identities = 425/556 (76%), Gaps = 33/556 (6%)
Strand=Plus/Plus
Query 956 CTCTCACTTGGTTCTTCTGGCTTCTCTCCAAGAACCCTGAAGCTGTGACCAAGATCCGCC 1015
||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| || |
Sbjct 101 CTCTCACTTGGTTCTTCTGGCTTCTGTCCAAGAACCCTGAAGCAATGAACAAGATTCGAC 160
Query 1016 AAGAGATCAACACAAATCTACCAGGAT-CCGGAATGAGTTTAGATGCAGACA-AGTTAAA 1073
||||| | | || || | | ||| || | | | |||| ||| | | || | ||| |
Sbjct 161 AAGAGGT-TA-AC-AA--GA--A-GATGCC-G-A-G-GTTT-GATCCCG-CAGATTTAGA 206
Query 1074 CAAGATGGTATATTTACATGGTGCATTGTGTGA-ATCACTACGCCTCTACGCGCCAATCC 1132
|||| | || ||| |||| ||||| ||||||| | | ||| | | ||| | ||| |||
Sbjct 207 CAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGA-CGCTAAGGTTATACCCACCAGTCC 265
Query 1133 CGTTCGAGA-GA-AAGACTCCCATAAAGCAAGATGTGCTTCCAAGTGGACACATGGTCGA 1190
| || | | | ||| | || ||||| ||| |||||||||||||| || | |||||
Sbjct 266 CATT-TA-ACCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGGGCATAAAGTCGA 323
Query 1191 TAAAAATTGGAAGATTTTGTTCTCTGTCTATGCATTGGGGAGGATGAGGTCCGTGTGGGG 1250
| | |||||||||||| | | ||| | |||||||| |||||||||| || || |||||
Sbjct 324 TGAGAATTGGAAGATTGTCATATCTATGTATGCATTAGGGAGGATGAAATCTGTTTGGGG 383
Query 1251 ACAGGACGCGTCTGAATTCAAACCAGAGAGATGGATCTCTGAGAGAAATGG-AGGCTTGA 1309
| | |||||| || |||| ||||||||||||||| | | | | | ||| ||| || |
Sbjct 384 AGATGACGCGGAAGATTTCAGACCAGAGAGATGGAT-T-TCATA-CAGTGGAAGG-TTAA 439
Query 1310 AACATGAACCATC-TTTCAAGTTCTTCGTGTTTAATTCTGGTCCAAGAAAC-TGCTTGGG 1367
|||| ||||| || | | |||||||| | |||||| |||||||||| | | ||||||||
Sbjct 440 AACAAGAACCTTCATAT-AAGTTCTTGGCGTTTAACGCTGGTCCAAG-AGCTTGCTTGGG 497
Query 1368 GAAAAATTTATCTTTCTTGCAGATGAAGACAGTAGCTGTTGAGATCATACGAAATTATGA 1427
||||| ||| | |||||||||||||||||||| |||| || ||||||||||| |||||
Sbjct 498 AAAAAAGTTAACGTTCTTGCAGATGAAGACAGTGGCTGCGGAAATCATACGAAACTATGA 557
Query 1428 CATCAAGGTCGTTGAAGGGCACAAGATCGAGCCAGCTTC-TTCCATAATCCTTCACATGA 1486
|||||||||||||||||||||||| | ||| || | ||| ||| | | ||| ||||
Sbjct 558 CATCAAGGTCGTTGAAGGGCACAAAACCGAACCTG-TTCCTTCTGTTCTTTTTCGCATGC 616
Query 1487 AACATGGCCTTAAAGT 1502
||||||| || |||||
Sbjct 617 AACATGGTCTCAAAGT 632
> Ahg475591 jgi|Araly1|475591|fgenesh2_kg.2__721__AT1G65340.1
Length=1380
Score = 121 bits (65), Expect = 2e-26
Identities = 123/151 (81%), Gaps = 3/151 (2%)
Strand=Plus/Plus
Query 1354 AGAAAC-TGCTTGGGGAAAAATTTATCTTTCTTGCAGATGAAGACAGTAGCTGTTGAGAT 1412
|||| | |||||||| ||||| ||| | ||||||||||||||||| || |||| || ||
Sbjct 1212 AGAAGCTTGCTTGGGAAAAAAGTTAACGTTCTTGCAGATGAAGACCGTGGCTGCGGAAAT 1271
Query 1413 CATACGAAATTATGACATCAAGGTCGTTGAAGGGCACAAGATCGAGCCAGCTTC-TTCCA 1471
||||||||| ||||||||||||||||||||||||||||| | ||| || | ||| |||
Sbjct 1272 CATACGAAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAACCTG-TTCCTTCTG 1330
Query 1472 TAATCCTTCACATGAAACATGGCCTTAAAGT 1502
| | ||| |||| ||||||| || |||||
Sbjct 1331 TTCTTTTTCGCATGCAACATGGTCTCAAAGT 1361
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57401999215
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5