BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G22910.1 Length=2075 Score E Sequences producing significant alignments: (Bits) Value Ahg481154 jgi|Araly1|481154|fgenesh2_kg.4__214__AT2G22910.1 3157 0.0 Ahg490852 jgi|Araly1|490852|fgenesh2_kg.7__285__AT4G37670.2 1544 0.0 Ahg932264 jgi|Araly1|932264|scaffold_400252.1 324 2e-87 > Ahg481154 jgi|Araly1|481154|fgenesh2_kg.4__214__AT2G22910.1 Length=2013 Score = 3157 bits (1709), Expect = 0.0 Identities = 1876/1958 (96%), Gaps = 5/1958 (0%) Strand=Plus/Plus Query 98 AATTCCTTCCATAAATTTCGAAATGACAGAGCGTGGAGCTATGGTGGTATCGTCTTCTAC 157 ||||||||||| ||||| |||||||| ||||| |||||||||||||| || |||||||| Sbjct 58 AATTCCTTCCACGAATTTTGAAATGACGGAGCGAGGAGCTATGGTGGTTTCTTCTTCTAC 117 Query 158 CTGTTACGTTCCTTTTCGATGTCCTCAAGCAAGAAAAGATTTTGCTTTCGTCGAGCCGAG 217 || ||| |||||||||||||||||||| ||||||| |||||| ||||| |||||||||| Sbjct 118 CTCATACCTTCCTTTTCGATGTCCTCAAACAAGAAAGGATTTTTCTTTCTTCGAGCCGAG 177 Query 218 TAAGAAGCTAAACCCTAATCGTGTATTGATAAAGCCTCCGGT-TTAC-ACGTATTCTCCG 275 |||||||||||||||||||||| ||| |||||| |||| || || | | | ||||||| Sbjct 178 TAAGAAGCTAAACCCTAATCGTCAATTAATAAAGTCTCC-GTCTT-CTATATCTTCTCCG 235 Query 276 GCACTGACGGCGGCGAAATGTAACATTTTTGATTACGCGGAAACTGGTGAGAATTTGGTC 335 |||||||| |||||||||| || || ||||||||||||||||||||||||||||||||| Sbjct 236 CCACTGACGCCGGCGAAATGCAATATGTTTGATTACGCGGAAACTGGTGAGAATTTGGTC 295 Query 336 GGCGATAAGCAATTTGTGCGGTGGTTTCGTGAAGCTTGGCCTTATTTGTGGGCTCATCGT 395 ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 296 GGCGATAAGCAGTTTGTGCGGTGGTTTCGTGAAGCTTGGCCTTATCTGTGGGCTCATCGT 355 Query 396 AGCTGTACCTTCGTCGTTACTATCTCCGGCGATGTCTTAGACGGCCCTTATTGTGATCTC 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 356 AGCTGTACCTTCGTCGTTACTATCTCCGGCGATGTCTTAGACGGCCCTTATTGTGATCTC 415 Query 456 GTTTTAAAGGACATAGCATTTCTTCATCATCTGGGCATTAAGTTTGTTCTAGTTCCTGGA 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 416 GTTTTAAAGGACATAGCATTTCTTCATCATCTGGGCATTAAGTTTGTTCTAGTTCCTGGA 475 Query 516 ACTCAAGTGCAAATCGACCAGCTTCTAGCTGAGAGAGGACGCGAGCCTACATATGTAGGT 575 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 476 ACTCAAGTGCAAATCGACCAGCTTCTAGCTGAGAGAGGACGCGAGCCTACATATGTGGGT 535 Query 576 CGTTACAGAGTCACAGACTCAGCATCTCTTCAGGCTGCTAAGGAAGCTGCGGGAGCAATA 635 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 536 CGTTACAGAGTCACAGACTCAGCATCTCTGCAGGCTGCCAAGGAAGCTGCGGGAGCAATA 595 Query 636 TCTGTAATGATTGAGGCCAAACTATCTCCCGGACCTTCTATTTACAATATACGCCGACAT 695 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 596 TCTGTAATGATTGAAGCCAAACTATCTCCCGGACCTTCCATTTACAATATACGCCGACAT 655 Query 696 GGTGATAGTAGTCGTTTGCATGAAACAGGCGTTAGGGTCGATACTGGTAACTTCTTTGCA 755 ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||| Sbjct 656 GGTGATAGTAGTCGTTTGCATGAAACAGGTGTTAGGGTGGATACTGGCAACTTCTTTGCA 715 Query 756 GCAAAGAGAAGAGGTGTTGTTGATGGTGTTGATTTTGGAGCAACTGGTTTAGTGAAGAAG 815 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 716 GCAAAGAGAAGAGGTGTTGTTGATGGTGTTGATTTTGGAGCAACTGGTTTAGTGAAGAAG 775 Query 816 ATAGATGTAGATCGAATCCGTGAGAGGCTTGATAGTGGTTCTGTAGTTTTATTGAGGAAC 875 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 776 ATAGATGTAGATCGGATCCGTGAGAGGCTTGATAGTGGTTCTGTAGTTTTATTGAGGAAC 835 Query 876 TTGGGCCATTCCAGCACCGGAGAAGTCTTAAATTGCAATACCTATGAGGTTGCTACAGCA 935 ||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct 836 TTGGGCCATTCCAGCTCCGGCGAAGTCTTAAATTGCAATACCTATGAGGTTGCGACAGCA 895 Query 936 TGTGCTTTAGCTATAGGAGCAGATAAGCTTATTTGCATAATGGATGGTCCAGTTCTTGAT 995 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 896 TGTGCTTTAGCTATAGGAGCAGATAAGCTTATTTGCATAATGGATGGTCCAATTCTTGAT 955 Query 996 GAGAATGGACATCTTGTTCGGTTCTTGACTCTTCAGGAAGCAGATACATTAGTCAGAAAA 1055 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 956 GAGAATGGACATCTTGTTCGGTTCTTGACTCTTCAGGAAGCAGATACGTTAGTCAGAAAA 1015 Query 1056 CGGGCACAGCAAAGCGAGATCGCTGCCAATTACGTGAAGGCTGTTGGGGATGGAGGCATA 1115 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1016 CGGGCACAGCAAAGCGAGATAGCTGCCAATTACGTGAAGGCTGTTGGGGATGGAGGCATA 1075 Query 1116 AGTAGTTTTCCTGAACCTCTTGGTTACAATGGTATGGTGACGACTCCCAACAATCATATT 1175 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1076 AGTAGTTTTCCTGAACCTCTTGGTTACAATGGGATGGTGACGACTCCCAACAATCATATT 1135 Query 1176 GGGAGACCGATTTGGGAAAAACTCAGTCCGACCTTTCAGAATGGTGTTGGATTTGACAAC 1235 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 1136 GGGAGACCGATTTGGGAAAAACACACTCCGACCTTTCAGAATGGTGTTGGATTTGACAAC 1195 Query 1236 GGAAATGGGTTGTGGTCTGGGGAGCAAGGTTTTGCTATTGGCGGTGAGGAGAGAATTAGC 1295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1196 GGAAATGGGTTGTGGTCTGGGGAGCAAGGTTTTGCTATTGGCGGTGAGGAGAGAATTAGC 1255 Query 1296 CGTTTGAATGGATATCTCTCTGAACTGGCTGCAGCAGCGTTCGTTTGCAGAGGTGGTGTC 1355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1256 CGTTTGAATGGATATCTCTCTGAACTGGCTGCAGCAGCGTTCGTTTGCAGAGGTGGTGTC 1315 Query 1356 AAAAGAGTTCACTTATTGGATGGTACTATAAGTGGAGTGCTATTGTTGGAGCTTTTCAAA 1415 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1316 AATAGAGTTCACTTATTGGATGGTACTATAAGTGGAGTGCTATTGTTGGAGCTTTTCAAA 1375 Query 1416 AGAGATGGAATGGGGACTATGGTGGCAAGTGATGTATATGAAGGAAACCGGGAGGCGAAA 1475 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1376 AGAGATGGAATGGGGACTATGGTGGCAAGTGATGTATATGAAGGAACCCGGGAGGCGAAA 1435 Query 1476 GTGGAAGATCTTGCTGGAATAAGACAAATAATCAAACCCCTGGAAGAATCTGGGGCTTTA 1535 ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 1436 GTGGAAGATCTTGCTGGAATAAGACAAATAATCAAACCCTTAGAAGAATCTGGGGCTTTA 1495 Query 1536 GTTCGTAGAACTGATGAGGAGCTTCTGCGAGCTTTGGATTCGTTTGTGGTTGTGGAAAGG 1595 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct 1496 GTTCGTAGAACTGATGAGGAGCTACTGCGAGCTTTGGATTCGTTTGTGGTTGTGGAACGA 1555 Query 1596 GAAGGACATATTATCGCTTGCGCGGCTTTGTTCCCTTTCTTTGAAGAAAAATGTGGAGAA 1655 |||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 1556 GAAGGACAGATTATCGCTTGTGCGGCTTTGTTCCCTTTCTTTGAAGACAAATGTGGAGAA 1615 Query 1656 GTTGCAGCTATCGCAGTTGCATCAGATTGCCGTGGACAAGGCCAGGGAGATAAATTGCTC 1715 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1616 GTTGCAGCTATCGCAGTTGCATCAGATTGCCGTGGACAAGGCCAGGGAGATAAATTGCTC 1675 Query 1716 GATTACATTGAGAAGAAAGCGTCAGCTCTTGGACTTGAGATGCTATTTCTGCTGACAACG 1775 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 1676 GATTACATTGAGAAGAAAGCGTCAGCTCTTGGACTCGAGATGCTTTTTCTGCTGACAACG 1735 Query 1776 AGAACCGCGGACTGGTTTGTGAGACGCGGGTTTCAGGAATGTCCAATCGAGATGATACCA 1835 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1736 AGAACCGCAGACTGGTTTGTGAGACGTGGGTTTCAGGAATGTCCAATCGAGATGATACCA 1795 Query 1836 GAGGCAAGACGGGAAAGAATCAATCTTTCGAGGAGATCAAAGTATTACATGAAGAAGCTG 1895 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct 1796 GAGGCAAGACGGGAAAGAATCAATCTTTCGAGGAGATCGAAGTATTACATGAAGAAGTTG 1855 Query 1896 TTGCCAGACAGGAGTGGAATTTCTGTTGTTCGAACATTTCAGTATGATTCTTGAGAGTGT 1955 ||||||||||||||||| || ||||||||||||||||||||||||| |||||||| |||| Sbjct 1856 TTGCCAGACAGGAGTGGGATATCTGTTGTTCGAACATTTCAGTATGGTTCTTGAGTGTGT 1915 Query 1956 CCAGAAGCAGAAAATTCAAACATAGAGCAAA-TAAAATGTAATTGACACAGAAACATTTA 2014 | ||||| |||| || |||||| ||||||| ||||||||||||||| |||||| ||||| Sbjct 1916 CGAGAAGAAGAAGATCCAAACACAGAGCAACCTAAAATGTAATTGACGCAGAAAGATTTA 1975 Query 2015 GCTGAATCTCTAAGATTCTGCTGAGTTTTGAATCAATA 2052 | |||||||||||||||| |||||||||||||||||| Sbjct 1976 TCCGAATCTCTAAGATTCTACTGAGTTTTGAATCAATA 2013 Score = 110 bits (59), Expect = 6e-23 Identities = 61/62 (98%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11 GAATACTTTTCTTCTTCCTCCACCGATCATCCGCCATTGTTACCCAATTTTGCTCTGAAT 70 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1 GAATACTTTTCTTCTTCCTCCACCGATCATCCGCCATTGTTACCCAATTATGCTCTGAAT 60 Query 71 TC 72 || Sbjct 61 TC 62 > Ahg490852 jgi|Araly1|490852|fgenesh2_kg.7__285__AT4G37670.2 Length=1924 Score = 1544 bits (836), Expect = 0.0 Identities = 1364/1614 (85%), Gaps = 55/1614 (3%) Strand=Plus/Plus Query 338 CGATAAGCAATTTGTGCGGTGGTTTCGTGAAGCTTGGCCTTATTTGTGGGCTCATCGTAG 397 ||| || || |||||||| |||||||||||||| ||||||||| |||||||||| ||| | Sbjct 237 CGACAAACAGTTTGTGCGTTGGTTTCGTGAAGCCTGGCCTTATCTGTGGGCTCACCGTGG 296 Query 398 CTGTACCTTCGTCGTTACTATCTCCGGCGATG-TCTTAGACGGCCCTTATTGTGATCTCG 456 ||| || |||||||||| |||||||||||| | || | | |||| ||| |||||||| | Sbjct 297 CTGCACATTCGTCGTTATTATCTCCGGCGA-GATCATCGCCGGCTCTTCTTGTGATCCCA 355 Query 457 TTTTAAAGGACATAGCATTTCTTCATCATCTGGGCATTAA-GTTTGTTCTAGTTCCTGGA 515 |||| ||||||||||| |||||||||||||| || | ||| ||||||| ||||||||||| Sbjct 356 TTTTGAAGGACATAGCGTTTCTTCATCATCTAGG-AATAAGGTTTGTTTTAGTTCCTGGA 414 Query 516 ACTCAAG-TGCAAATCGACCAGCTTCTAG-CTGAGAGAGGACGCGA-GCCTACATATGTA 572 ||||||| | ||||||||| ||||||| | |||||||||||||||| ||| |||||||| Sbjct 415 ACTCAAGAT-CAAATCGACGAGCTTCT-GTCTGAGAGAGGACGCGAGGCC-ACATATGTG 471 Query 573 GGTCGTTACAGAGTCACAGACT-CAGCATCTCTT-CAGGCTGCTAAGGAAGCTGCGGGAG 630 |||||||||||||| || || | |||||||| || |||||||| || |||||||| |||| Sbjct 472 GGTCGTTACAGAGTAACGGA-TGCAGCATCT-TTGCAGGCTGCCAAAGAAGCTGCAGGAG 529 Query 631 CAATATCTGTAATGATTGAGGCCAAACTATCTCCCGGACCTTCTATTTACAATATACGCC 690 ||||||| || ||| ||||||||||||||||||| |||||||| |||| |||||| || Sbjct 530 CAATATCAGTGATGCTTGAGGCCAAACTATCTCCTGGACCTTCCATTTGCAATATCCGTA 589 Query 691 GACATGGTGATAGTAGTCGTTTGCATGAAACAGGCGTTAGGGTCGATACTGGTAACTTCT 750 |||| |||||| |||||||||| ||||| | ||| |||||||| |||||||||||||||| Sbjct 590 GACACGGTGATCGTAGTCGTTTACATGATATAGGTGTTAGGGTTGATACTGGTAACTTCT 649 Query 751 TTGCAGCAAAGAGAAGAGGTGTTGTTGATGGTGTTGATTTTGGAGCAACTGGTTTA-GTG 809 |||||||||| ||||||||||||||||| ||||||||||||||||| || || | | || Sbjct 650 TTGCAGCAAAAAGAAGAGGTGTTGTTGACGGTGTTGATTTTGGAGCGACAGG-TGAGGTA 708 Query 810 AAGAAGATAGATGTAGATCGAATCCGTGAGAGGCTTGATAGTGGTTCTGTAGTTTTATTG 869 |||||||||||||||||||| || ||||||||||||| |||||||| ||||||| ||| Sbjct 709 AAGAAGATAGATGTAGATCGGATTTGTGAGAGGCTTGACGGTGGTTCTATAGTTTTGTTG 768 Query 870 AGGAACTTGGGCCATTCCAGCACCGGAGAAGTCTTAAATTGCAATACCTATGAGGTTGCT 929 |||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| Sbjct 769 AGGAACTTGGGCCACTCTAGCTCCGGAGAAGTCTTAAATTGCAATACCTATGAGGTTGCT 828 Query 930 ACAGCATGTGCTTTAGCTATAGGAGCAGATAAGCTTATTTGCATAATGGATGGTCCAGTT 989 ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||| || Sbjct 829 ACAGCTTGTGCTTTAGCTATAGGAGCAGATAAGCTAATTTGCATAATGGACGGTCCAATT 888 Query 990 CTTGATGAGAATGGACATCTTGTTCGGTTCTTGACTCTTCAGGAAGCAGATACATTAGTC 1049 |||||||||| |||||||||| |||| |||||||| ||||| |||||||||| ||||| Sbjct 889 CTTGATGAGAGTGGACATCTTATTCGTTTCTTGACACTTCAAGAAGCAGATATGTTAGTT 948 Query 1050 AGAAAACGGGCACAGCAAAGCGAGATCGCTGCCAATTACGTGAAGGCTGTTGGGGATGGA 1109 |||||||| || || || || || || ||||| |||||||||||||| ||||| |||||| Sbjct 949 AGAAAACGTGCTCAACAGAGTGACATAGCTGCAAATTACGTGAAGGCCGTTGGAGATGGA 1008 Query 1110 GGCATAAGTAGTTTTCCTGAACCTCTTGGTTACA--ATG--GTATGGTGACGACTCC-CA 1164 | || | | || ||| ||||||| | ||| | | ||| | || |||| || Sbjct 1009 AGTAT--G-ACTTATCCCGAACCTCCTAACAACACCA-GCAGTAACATTACTTCTCCTCA 1064 Query 1165 ACAATCATATTGGGAGACC-G-ATTT-GGG-AAA---AA-CT-CAGTCCGACCTTTCAGA 1215 | || | |||||| | | |||| ||| ||| || | || |||| |||||||| Sbjct 1065 A-AA-C-----GGGAGAGCAGCATTTTGGGGAAACGGAAACCACACTCCGGTCTTTCAGA 1117 Query 1216 ATGGTGTTGGATTTGACAACGGAAATGGGTTGTGGTCTGGGGAGCAAGGTTTTGCTATTG 1275 | ||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| Sbjct 1118 ACGGTGTTGGATTTGACAACGGAAACGGATTGTGGTCTGGTGAGCAAGGTTTTGCTATTG 1177 Query 1276 GCGGTGAGGAGAGAATTA-GCCGTTTGAATGGATATCTCTCTGAACTGGCTGCAGCAGCG 1334 | |||||||| ||| ||| |||| || || || ||||| |||||| ||||||| || ||| Sbjct 1178 GTGGTGAGGAAAGA-TTAAGCCGCTTAAACGGTTATCTTTCTGAATTGGCTGCTGCGGCG 1236 Query 1335 TTCGTTTGCAGAGGTGGTGTCAAAAGAGTTCACTTATTGGATGGTACTATAAGTGGAGTG 1394 ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 1237 TTCGTCTGCAGAGGTGGAGTCAAAAGAGTTCACTTGTTGGATGGTACTATAAGTGGAGTT 1296 Query 1395 CTATTGTTGGAGCTTTTCAAAAGAGATGGAATGGGGACTATGGTGGCAAGTGATGTATAT 1454 |||||| |||||||||||||||||||||||||||| |||||||| || |||||||| || Sbjct 1297 CTATTGCTGGAGCTTTTCAAAAGAGATGGAATGGGAACTATGGTTGCTAGTGATGTTTAC 1356 Query 1455 GAAGGAAACCGGGAGGCGAAAGTGGAAGATCTTGCTGGAATAAGACAAATAATCAAACCC 1514 ||||||| |||||| || | |||||||||||||| ||||| ||||| |||||||||||| Sbjct 1357 GAAGGAACCCGGGATGCCAGAGTGGAAGATCTTGAAGGAATTAGACATATAATCAAACCC 1416 Query 1515 CTGGAAGAATCTGGGGCTT-TAGTTCGTAGAACTGATGAGGAGCTT-CTGCGAGCTTTGG 1572 |||| ||||| ||| || ||||||| ||||||||||||||| || |||||||| |||| Sbjct 1417 TTGGAGGAATCAGGGA-TTCTAGTTCGCAGAACTGATGAGGAG-TTACTGCGAGCCTTGG 1474 Query 1573 ATTCGTTTGTGGTTGTGGAAAGGGAAGGACATATTATCGCTTGCGCGGCTTTGTTCCCTT 1632 |||| ||||||||||||||||||||||| || || |||||||| ||||||||||| || | Sbjct 1475 ATTCATTTGTGGTTGTGGAAAGGGAAGGTCAGATCATCGCTTGTGCGGCTTTGTTTCCGT 1534 Query 1633 TCTTTGAAGAAAAATGTGGAGAAGTTGCAGCTATCGCAGTTGCATCAGATTGCCGTGGAC 1692 ||||| |||| ||||| |||||||||||||| ||||| |||||||||||||| || || | Sbjct 1535 TCTTTCAAGACAAATGCGGAGAAGTTGCAGCAATCGCGGTTGCATCAGATTGTCGCGGTC 1594 Query 1693 AAGGCCAGGGAGATAAATTGCTCGATTACATTGAGAAGAAAGCGTCAG-CTCTTGGACTT 1751 ||||||| ||||||||||||||||||||||| ||||||||||| || | |||| || || Sbjct 1595 AAGGCCAAGGAGATAAATTGCTCGATTACATAGAGAAGAAAGCTTC-GTCTCTCGGG-TT 1652 Query 1752 -GAGATGCTATTTCTGCTGACAACGAGAACCGCGGACTGGTTTGTGAGACGCGGGTTTCA 1810 || | ||| || || || ||||| |||| || |||||||| |||||||||||||| || Sbjct 1653 AGAAAAGCTGTTCCTACTCACAACCCGAACAGCAGACTGGTTCGTGAGACGCGGGTTCCA 1712 Query 1811 GGAATGTCCAATCGAGATGATACCAGAG-GCAAGACGGGAAAGAATCAATCTTTCGAGGA 1869 |||||| |||||||||| ||||||||| | | || | | ||||||||||| || || | Sbjct 1713 AGAATGTTCAATCGAGATCATACCAGAGAGTA-GAAGACAGAGAATCAATCTATCTAGAA 1771 Query 1870 GATCAAAGTATTACATGAAGAAGCTGT-TGCCAGACAGGAGTGGAATTTCTGTT 1922 |||||||||||||| |||||| || | | || || || ||||| ||||| ||| Sbjct 1772 AATCAAAGTATTACACGAAGAAACT-TCTACCTGATAGAAGTGGCATTTCAGTT 1824 > Ahg932264 jgi|Araly1|932264|scaffold_400252.1 Length=320 Score = 324 bits (175), Expect = 2e-87 Identities = 210/227 (93%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 626 GGGAGCAATATCTGTAATGATTGAGGCCAAACTATCTCCCGGACCTTCTATTTACAATAT 685 ||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 27 GGGAGCAATATCTTTGATGATTGAAGCCAAACTATCTCCCGGACCTTCCATTTACAATAT 86 Query 686 ACGCCGACATGGTGATAGTAGTCGTTTGCATGAAACAGGCGTTAGGGTCGATACTGGTAA 745 |||||||||||||||||||||| || ||||||||||||| ||||| ||||| ||||||| Sbjct 87 ACGCCGACATGGTGATAGTAGTTGTCTGCATGAAACAGGTGTTAGAGTCGACACTGGTAC 146 Query 746 CTTCTTTGCAGCAAAGAGAAGAGGTGTTGTTGATGGTGTTGATTTTGGAGCAACTGGTTT 805 |||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||| Sbjct 147 CTTCTTTGCAACAAATAGAAGAGGTATTGTTGATGGTGTGGATTTTGGAGCAACTGGTTT 206 Query 806 AGTGAAGAAGATAGATGTAGATC-GAATCCGTGAGAGGCTTGATAGT 851 ||||||||||||||||||||||| || |||||||| ||||||||||| Sbjct 207 AGTGAAGAAGATAGATGTAGATCAGA-TCCGTGAGTGGCTTGATAGT 252 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78046912005 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5