BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G22950.1
Length=3048
Score E
Sequences producing significant alignments: (Bits) Value
Ahg899595 jgi|Araly1|899595|Al_scaffold_0004_245 4798 0.0
Ahg490855 jgi|Araly1|490855|fgenesh2_kg.7__288__AT4G37640.1 3066 0.0
> Ahg899595 jgi|Araly1|899595|Al_scaffold_0004_245
Length=3048
Score = 4798 bits (2598), Expect = 0.0
Identities = 2901/3051 (95%), Gaps = 6/3051 (0%)
Strand=Plus/Plus
Query 1 ATGGAGAGTTACCTCAACTCGAATTTCGACGTTAAGGCGAAGCATTCGTCGGAGGAAGTG 60
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 1 ATGGAGAGTTACCTCAACTCAAATTTCGACGTTAAGGCGAAGCATTCGTCAGAGGAAGTT 60
Query 61 CTAGAAAAATGGCGGAATCTTTGCAGTGTCGTCAAGAACCCGAAACGTCGGTTTCGATTC 120
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 61 CTTGAAAAATGGCGGAATCTTTGCAGTGTCGTCAAAAACCCGAAACGTCGGTTTCGCTTC 120
Query 121 ACTGCCAATCTCTCCAAACGTTACGAAGCTGCTGCCATGCGCCGCACCAACCAGGAGAAA 180
||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || |||
Sbjct 121 ACTGCCAATCTCTCCAAGCGTTACGAAGCTGCTGCCATGCGACGCACCAACCAAGAAAAA 180
Query 181 TTAAGGATTGCAGTTCTCGTGTCAAAAGCCGCATTTCAATTTATCTCTGGTGTTTCTCCA 240
||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 181 TTAAGGATTGCAGTTCTTGTGTCAAAAGCCGCATTCCAATTCATCTCTGGTGTTTCTCCA 240
Query 241 AGTGACTACAAGGTGCCTGAGGAAGTTAAAGCAGCAGGCTTTGACATTTGTGCAGACGAG 300
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 241 AGTGACTATAAGGTGCCTGAAGAAGTTAAAGCAGCAGGCTTTGACATTTGTGCAGATGAG 300
Query 301 TTAGGATCAATAGTGGAAGGTCATGATGTGAAGAAGCTCAAGTTCCATGGTGGTGTTGAT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TTAGGATCAATAGTGGAAGGTCATGATGTGAAGAAGCTCAAGTTCCATGGTGGTGTTGAT 360
Query 361 GGTCTTTCAGGTAAGCTCAAGGCATGTCCCAATGCTGGTCTCTCAACAGGTGAACCTGAG 420
||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 361 GGTCTTTCAGGTAAGCTTAAGGCATGTCCCAATGCTGGTCTCTCAACAGGGGAACCTGAC 420
Query 421 CAGTTAAGCAAACGACAAGAGCTTTTCGGAATCAATAAGTTTGCAGAGAGTGAATTACGA 480
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 421 CAGTTAAACAAACGACAAGAGCTTTTCGGAATCAATAAGTTTGCGGAGAGTGAATTACGG 480
Query 481 AGTTTCTGGGTGTTTGTTTGGGAAGCACTTCAAGATATGACTCTTATGATTCTTGGTGTT 540
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 AGTTTTTGGGTGTTTGTTTGGGAAGCACTTCAAGATATGACTCTTATGATTCTTGGTGTT 540
Query 541 TGTGCTTTCGTCTCTTTGATTGTTGGGATTGCAACTGAAGGATGGCCTCAAGGATCGCAT 600
|| |||||||| |||||||| ||||| |||||||||||||||||||| ||||| || |||
Sbjct 541 TGCGCTTTCGTTTCTTTGATAGTTGGAATTGCAACTGAAGGATGGCCCCAAGGGTCACAT 600
Query 601 GATGGTCTTGGCATTGTTGCTAGTATTCTTTTAGTTGTGTTTGTGACAGCAACTAGTGAC 660
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct 601 GATGGTCTTGGCATTGTTGCTAGTATTCTTTTGGTTGTGTTTGTGACAGCTACTAGCGAT 660
Query 661 TATAGACAATCTTTGCAGTTCCGGGATTTGGATAAAGAGAAGAAGAAGATCACGGTTCAA 720
||| | || |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 661 TATCGCCAGTCTTTGCAGTTCCGGGATTTGGATAAGGAGAAGAAGAAGATCACGGTTCAA 720
Query 721 GTTACGCGAAACGGGTTTAGACAAAAGATGTCTATATATGATTTGCTCCCTGGAGATGTT 780
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 721 GTTACGCGAAACGGGTTTAGACAGAAGATGTCTATATATGATTTGCTCCCTGGTGATGTT 780
Query 781 GTTCATCTTGCTATCGGAGATCAAG-TCCCTGCAGATGGTCTTTTCCTCTCGGGATTCTC 839
|||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||
Sbjct 781 GTTCATCTTGCTATTGGAGATCAAGTTCCC-GCGGATGGTCTTTTCCTCTCGGGATTCTC 839
Query 840 TGTTGTTATCGATGAATCGAGTTTAACTGGAGAGAGTGAGCCTGTGATGGTGACTGCACA 899
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 840 TGTTGTTATCGATGAATCGAGTTTAACTGGTGAGAGTGAGCCTGTGATGGTGACTGCACA 899
Query 900 GAACCCTTTCCTTCTCTCTGGAACCAAAGTTCAAGATGGGTCATGTAAGATGTTGGTTAC 959
|||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 900 AAACCCTTTTCTTCTCTCTGGAACCAAAGTTCAAGATGGGTCTTGTAAGATGCTGGTTAC 959
Query 960 AACAGTTGGGATGAGAACTCAATGGGGAAAGTTAATGGCAACACTTAGTGAAGGAGGAGA 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 960 AACAGTTGGGATGAGAACTCAATGGGGAAAGTTAATGGCAACACTTAGTGAAGGAGGCGA 1019
Query 1020 TGACGAAACTCCGTTGCAGGTGAAACTTAATGGAGTTGCAACCATCATTGGGAAAATTGG 1079
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1020 TGACGAAACTCCGTTGCAAGTGAAACTTAATGGAGTTGCAACCATCATTGGAAAAATCGG 1079
Query 1080 TCTTTCCTTCGCTATTGTTACCTTTGCGGTTTTGGTACAAGGAATGTTTATGAGGAAGCT 1139
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1080 TCTTTTCTTCGCTATTGTTACCTTTGCGGTTTTGGTGCAAGGAATGTTTATGAGGAAGCT 1139
Query 1140 TTCATTAGGCCCTCATTGGTGGTGGTCCGGAGATGATGCATTAGAGCTTTTGGAGTATTT 1199
|||||| || |||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 1140 TTCATTGGGAACTCATTGGTGGTGGTCTGGAGATGATGCATTGGAGCTTTTGGAGTATTT 1199
Query 1200 TGCTATTGCTGTCACAATTGTTGTTGTTGCGGTTCCTGAAGGTTTACCATTAGCTGTCAC 1259
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1200 TGCTATTGCTGTCACAATTGTTGTCGTCGCGGTTCCTGAAGGTTTACCATTAGCTGTCAC 1259
Query 1260 ACTTAGTCTCGCGTTTGCGATGAAGAAGATGATGAACGATAAAGCGCTTGTTCGCCATTT 1319
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1260 TCTTAGTCTCGCCTTTGCGATGAAGAAGATGATGAACGATAAAGCGCTTGTTCGTCATTT 1319
Query 1320 AGCAGCTTGTGAGACAATGGGATCTGCAACTACCATTTGTAGTGACAAGACTGGTACATT 1379
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1320 GGCAGCTTGTGAAACAATGGGATCTGCAACTACTATTTGTAGTGACAAGACTGGTACATT 1379
Query 1380 AACAACAAATCACATGACTGTTGTGAAATCTTGCATTTGTATGAATGTTCAAGATGTAGC 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 AACAACAAATCACATGACTGTTGTGAAATCTTGCATTTGTATGAATGTTCAAGATGTAGC 1439
Query 1440 TAGCAAAAGTTCTAGTTTACAATCTGATATCCCTGAAGCTGCCTTGAAACTACTTCTCCA 1499
||||||| |||| |||||||| ||||| || ||||||| ||| |||||||||||||||||
Sbjct 1440 TAGCAAAGGTTCAAGTTTACAGTCTGAAATACCTGAAGTTGCTTTGAAACTACTTCTCCA 1499
Query 1500 GTTGATTTTTAATAATACCGGTGGAGAAGTTGTTGTGAACGAACGTGGCAAGACTGAGAT 1559
| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1500 ATCGATTTTTAATAATACCGGTGGCGAAGTTGTTGTGAACGAACGTGGCAAGACTGAGAT 1559
Query 1560 ATTGGGGACACCAACAGAGACTGCTATATTGGAGTTAGGACTATCTCTTGGAGGTAAGTT 1619
||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||||
Sbjct 1560 ATTGGGGACACCAACAGAGACAGCTATATTAGAGTTTGGGTTATCTCTTGGAGGTAAGTT 1619
Query 1620 TCAAGAAGAGAGACAATCTAACAAAGTTATTAAAGTTGAGCCTTTTAACTCAACAAAGAA 1679
|||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||
Sbjct 1620 CCAAGAAGAGAGACAATCTTACAAAGTTATCAAAGTTGAGCCTTTTAACTCCACAAAGAA 1679
Query 1680 AAGAATGGGAGTAGTCATTGAGCTGCCTGAAGGAGGACGCATTCGCGCTCACACGAAAGG 1739
|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1680 GAGAATGGGAGTAGTGATTGAGCTGCCTGAAGGAGGACGCATTCGTGCTCACACGAAAGG 1739
Query 1740 AGCTTCAGAGATAGTTTTAGCGGCTTGTGATAAAGTCATCAACTCAAGTGGTGAAGTTGT 1799
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1740 AGCTTCAGAGATAGTTTTAGCGGCTTGCGATAAAGTCATCAACTCAAGCGGTGAAGTTGT 1799
Query 1800 TCCGCTTGATGATGAATCCATCAAGTTCTTGAATGTTACAATCGATGAGTTTGCAAATGA 1859
|||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 1800 TCCGCTTGATGACGAATCTATCAAGTTCTTGAATGTCACAATCGATGAGTTTGCAAATGA 1859
Query 1860 AGCTCTTCGTACTCTTTGCCTTGCTTATATGGATATCGAAAGCGGGTTTTCGGCTGATGA 1919
|||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||
Sbjct 1860 AGCTCTTCGTACACTTTGCCTTGCTTATATGGATATCGAAAATGGGTTTTCTGCGGATGA 1919
Query 1920 AGGTATTCCGGAAAAAGGGTTTACATGCATAGGGATTGTTGGTATCAAAGACCCTGTTCG 1979
||||||||||| | ||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1920 AGGTATTCCGGCTAGAGGGTTTACTTGCATAGGGATTGTTGGTATCAAAGACCCTGTACG 1979
Query 1980 TCCTGGAGTTCGGGAGTCCGTGGAACTTTGTCGCCGTGCGGGTATTATGGTGAGAATGGT 2039
|||||||||| || |||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1980 TCCTGGAGTTAGGAAGTCCGTGGAACTTTGTCGCCGAGCAGGTATTATGGTGAGAATGGT 2039
Query 2040 TACAGGAGATAACATTAACACCGCAAAGGCTATTGCTAGAGAATGTGGAATTCTCACTGA 2099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2040 TACAGGAGATAACATTAACACCGCAAAGGCTATTGCTAGAGAATGTGGAATTCTCACTGA 2099
Query 2100 TGATGGTATAGCAATTGAAGGTCCTGTGTTTAGAGAGAAGAACCAAGAAGAGATGCTTGA 2159
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 2100 TGATGGTATAGCAATTGAAGGTCCTGTGTTTAGAGAGAAGAATCAAGAAGAGATGCTGGA 2159
Query 2160 ACTCATTCCCAAGATTCAGGTCATGGCTCGTTCTTCCCCAATGGACAAGCATACACTGGT 2219
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||
Sbjct 2160 ACTCATTCCCAAGATTCAGGTGATGGCTCGTTCTTCGCCTATGGACAAGCATACACTGGT 2219
Query 2220 GAAGCAGTTGAGGACTACTTTTGATGAAGTTGTTGCTGTGACTGGCGACGGGACAAACGA 2279
||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 2220 GAAGCAGTTAAGGACCACTTTTGATGAAGTTGTTGCCGTGACTGGTGACGGGACAAACGA 2279
Query 2280 TGCACCAGCGCTCCACGAGGCTGACATAGGATTAGCAATGGGCATTGCCGGGACTGAAGT 2339
||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 2280 TGCACCAGCACTCCACGAGGCTGACATAGGATTAGCAATGGGCATTGCCGGAACAGAAGT 2339
Query 2340 AGCGAAAGAGATTGCGGATGTCATCATTCTCGACGATAACTTCAGCACAATCGTCACCGT 2399
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 2340 AGCGAAAGAGAGCGCGGATGTCATCATTCTCGACGATAATTTCAGCACAATCGTCACAGT 2399
Query 2400 AGCGAAATGGGGACGTTCTGTTTACATTAACATTCAGAAATTTGTGCAGTTTCAACTAAC 2459
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 2400 AGCGAAATGGGGACGTTCTGTTTACATTAACATACAGAAATTTGTGCAGTTTCAGCTAAC 2459
Query 2460 AGTCAATGTTGTTGCCCTTATTGTTAACTTCTCTTCAGCTTGCTTGACTGGAAGTGCTCC 2519
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2460 AGTCAATGTTGTTGCCCTCATTGTTAACTTCTCTTCAGCTTGCTTGACTGGAAGTGCTCC 2519
Query 2520 TCTAACTGCTGTTCAACTGCTTTGGGTTAACATGATCATGGACACACTTGGAGCTCTTGC 2579
||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 2520 CCTAACTGCTGTGCAACTGCTTTGGGTCAACATGATAATGGACACACTTGGAGCTCTTGC 2579
Query 2580 TCTAGCTACAGAACCTCCGAACAACGAGCTGATGAAACGTATGCCTGTTGGAAGAAGAGG 2639
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2580 TCTAGCTACAGAACCTCCGAACAACGAGCTGATGAAACGTATGCCTGTTGGAAGGAGAGG 2639
Query 2640 GAATTTCATTACCAATGCGATGTGGAGAAACATCTTAGGACAAGCTGTGTATCAATTTAT 2699
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 2640 GAATTTCATTACCAATGCGATGTGGAGGAACATCTTAGGACAAGCTGTGTATCAATTCAT 2699
Query 2700 TATCATATGGATTCTACAGGCCAAAGGGAAGTCCATGTTTGGTCTTGTTGGTTCTGACTC 2759
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2700 TATCATTTGGATTCTTCAGGCCAAAGGGAAGTCCATGTTTGGTCTTGTTGGTTCTGACTC 2759
Query 2760 TACTCTCGTATTGAACACACTTATCTTCAACTGCTTTGTATTCTGCCAGGTTTTCAATGA 2819
|||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 2760 TACTCTTGTATTAAACACACTTATCTTCAACTGCTTTGTCTTCTGTCAGGTTTTCAATGA 2819
Query 2820 AGTAAGCTCGCGGGAGATGGAAGAGATCGATGTTTTCAAAGGCATACTCGACAACTATGT 2879
||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2820 AGTAAGCTCAAGGGAGATGGAAGAGATCGATGTTTTAAAAGGCATACTCGACAACTATGT 2879
Query 2880 -TTTCGTGGTTGTTATTGGTGCAACAGTTTTCTTTCAGATCATAATCATTGAGTTCTTGG 2938
||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2880 CTTT-GTGGTTGTTATTGGTGCAACGGTTTTCTTTCAGATCATAATCATTGAGTTCTTGG 2938
Query 2939 GCACATTTGCAAGCACCACACCTCTTACAATAGTTCAATGGTTCTTCAGCAT-TTTCGTT 2997
|||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 2939 GCACATTTGCAAGCACAACACCTCTTACAATAGTTCAATGGTTCTTCAGCATATTT-GTT 2997
Query 2998 GGCTTCTTGGGTATGCCGATCGCTGCTGGCTTGAAGAAAATACCCGTGTGA 3048
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2998 GGCTTCTTGGGTATGCCGATCGCTGCTGGCTTGAAGAAAATACCCGTGTGA 3048
> Ahg490855 jgi|Araly1|490855|fgenesh2_kg.7__288__AT4G37640.1
Length=3341
Score = 3066 bits (1660), Expect = 0.0
Identities = 2608/3070 (85%), Gaps = 47/3070 (2%)
Strand=Plus/Plus
Query 1 ATGGAGAGTTACCTCAACTCGAATTTCGACGTTAAGGCGAAGCATTCGTCGGAGGAAGTG 60
|||||||||||||| ||| ||||||||| || |||||||| ||||| || |||||||||
Sbjct 102 ATGGAGAGTTACCTAAACGAGAATTTCGATGTGAAGGCGAAACATTCTTCAGAGGAAGTG 161
Query 61 CTAGAAAAATGGCGGAATCTTTGCAGTGTCGTCAAGAACCCGAAACGTCGGTTTCGATTC 120
|| || |||||||| ||||| || || || ||||||||||| |||||||||||||| |||
Sbjct 162 CTTGAGAAATGGCGTAATCTCTGTAGCGTTGTCAAGAACCCTAAACGTCGGTTTCGTTTC 221
Query 121 ACTGCCAATCTCTCCAAACGTTACGAAGCTGCTGCCATGCGCCGCACCAACCAGGAGAAA 180
|| || |||||||| ||||| || ||||| || || ||||| ||||||||||||||||||
Sbjct 222 ACCGCTAATCTCTCTAAACGCTATGAAGCCGCCGCGATGCGTCGCACCAACCAGGAGAAA 281
Query 181 TTAAGGATTGCAGTTCTCGTGTCAAAAGCCGCATTT-CAATTTATCTCTGGTGTTTCTCC 239
|||||||| || ||||||||||| ||||| || ||| |||||||||||||||||| ||||
Sbjct 282 TTAAGGATCGCTGTTCTCGTGTCTAAAGCTGC-TTTCCAATTTATCTCTGGTGTTGCTCC 340
Query 240 AAGTGACTACAAGGTGCCTGAGGAAGTTAAAGCAGCAGGCTTTGACATTTGTGCAGACGA 299
||||||||||| || ||||| ||||| ||||| || |||||||| |||||||| |||||
Sbjct 341 AAGTGACTACACTGTACCTGAAGAAGTCAAAGCTGCTGGCTTTGAGATTTGTGCTGACGA 400
Query 300 GTTAGGATCAATAGTGGAAG-GTCATGATGTGAAGAAGCTCAAGTTCCATGGTGGTGTTG 358
|| |||||||| || | || |||||||||| ||||||||||||||||||||||| ||||
Sbjct 401 ATTGGGATCAATTGTTG-AGAGTCATGATGTTAAGAAGCTCAAGTTCCATGGTGGAGTTG 459
Query 359 ATGGTCTTTCAGGTAAGCTCAAGGCATGTCCCA-ATGCTGGTCTCTCAACAGGTGAACCT 417
|||| ||| |||||||||||||||| | ||| | | | ||| || || || ||| ||
Sbjct 460 ATGGGCTTGCAGGTAAGCTCAAGGCTTCTCCTACA-GATGGGCTTTCGAC---TGAGGCT 515
Query 418 GAGCAGTTA-AGCAAACGACAAGAGCTTTTCGGAATCAATAAGTTTGCAGAGAGTGAATT 476
| |||||| |||| | |||||||||||||||||||| |||||||||||||| ||| |
Sbjct 516 GCTCAGTTATCCCAAA-GGCAAGAGCTTTTCGGAATCAACAAGTTTGCAGAGAGCGAAAT 574
Query 477 ACGAAGTTTCTGGGTGTTTGTTTGGGAAGCACTTCAAGATATGACTCTTATGATTCTTGG 536
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 575 GCGCGGTTTCTGGGTGTTTGTTTGGGAAGCTCTTCAAGATATGACTCTTATGATTCTTGG 634
Query 537 TGTTTGTGCTTTCGTCTCTTTGATTGTTGGGATTGCAACTGAAGGATGGCCTCAAGGATC 596
|||||| |||||||| |||||||| ||||||||||| ||||||||||||||| |||| ||
Sbjct 635 TGTTTGCGCTTTCGTGTCTTTGATCGTTGGGATTGCTACTGAAGGATGGCCTAAAGGGTC 694
Query 597 GCATGATGGTCTTGGCATTGTTGCTAGTATTCTTTTAGTTGTGTTTGTGACAGCAACTAG 656
|||||||||||||||||||| ||||||||||| || ||||||||||| ||||| |||||
Sbjct 695 ACATGATGGTCTTGGCATTGTGGCTAGTATTCTCTTGGTTGTGTTTGTTACAGCTACTAG 754
Query 657 TGACTATAGACAATCTTTGCAGTTCCGGGATTTGGATAAAGAGAAGAAGAAGATCACGGT 716
|| ||| | || |||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 755 CGATTATCGCCAGTCTTTGCAGTTCCGGGATTTGGATAAGGAGAAGAAGAAGATCACTGT 814
Query 717 TCAAGTTACGCGAAACGGGTTTAGACA-AAAGATGTCTATATATGATTTGCT-CCCTGGA 774
||| || ||| | |||||||||||||| ||| |||| |||||||| ||||| ||| ||
Sbjct 815 TCAGGTGACGAGGAACGGGTTTAGACAGAAAC-TGTCGATATATGACTTGCTTCCC-GGT 872
Query 775 GATGTTGTTCATCTTGCTATCGGAGATCAAGTCCCTGCAGATGGTCTTTTCCTCTCGGGA 834
|| |||||||||| || || |||||||| || ||||| ||||||||||||||||| |||
Sbjct 873 GACATTGTTCATCTGGCGATTGGAGATCAGGTTCCTGCTGATGGTCTTTTCCTCTCCGGA 932
Query 835 TTCTCTGTTGTTATCGATGAATCGAGTTTAACTGGAGAGAGTGAGCCTGTGATGGTGACT 894
||||| || || || |||||||||||||| ||||| || ||||||||||||||||||| |
Sbjct 933 TTCTCCGTGGTGATAGATGAATCGAGTTTGACTGGCGAAAGTGAGCCTGTGATGGTGAAT 992
Query 895 GCACAGAACCCTTTCCTTCTCTCTGGAACCAAAGTTCAAGATGGGTCATGTAAGATGTTG 954
|| ||||| ||||||||| | |||||||||||||| |||||||| || ||||||||| ||
Sbjct 993 GCGCAGAATCCTTTCCTTATGTCTGGAACCAAAGTGCAAGATGGATCTTGTAAGATGATG 1052
Query 955 GTTACAACAGTTGGGATGAGAACTCAATGGGGAAAGTTAATGGCAACACTT-AGTGAAGG 1013
|||| |||||||||||||| ||||||||||||||| ||||||| || || | ||||||
Sbjct 1053 ATTACTACAGTTGGGATGAGGACTCAATGGGGAAAGCTAATGGCGACT-TTGACTGAAGG 1111
Query 1014 AGGAGATGACGAAACTCCGTTGCAGGTGAAACTTAATGGAGTTGCAACCATCATTGGGAA 1073
||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||||| ||
Sbjct 1112 AGGGGATGACGAAACTCCTTTGCAGGTGAAACTCAATGGAGTTGCTACCATCATTGGCAA 1171
Query 1074 AATTGGTCTTTCCTTCGCTATTGTTACCTTT-GCGGTTTTGGTACAAGGAATGTTTATGA 1132
||||||||||| ||| || ||||||| ||| || |||||||| ||||||||||||||||
Sbjct 1172 AATTGGTCTTTTCTTTGCGGTTGTTAC-TTTCGCAGTTTTGGTGCAAGGAATGTTTATGA 1230
Query 1133 GGAAGCTTTCATTAGGCCCTCATTGG-TGGTGGTCCGGAGATGATGCATTAGAGCTTTTG 1191
||||||||||| || |||| ||| | ||||| || ||||| ||||| ||||| |||
Sbjct 1231 GGAAGCTTTCAACGGGAACTCACTGGATC-TGGTCTGGTGATGAAGCATTGGAGCTCTTG 1289
Query 1192 GAGTATTTTGCTATTGCTGTCACAATTGTTGTTGTTGCGGTTCCTGAAGGTTTACCATTA 1251
|| || ||||||||||| || ||||| ||||| |||||||||||||| || || || |||
Sbjct 1290 GAATACTTTGCTATTGCCGTGACAATCGTTGTGGTTGCGGTTCCTGAGGGATTGCCTTTA 1349
Query 1252 GCTGTCACACTTAGTCTCGCGTTTGCGATGAAGAAGATGATGAACGATAAAGCGCTTGTT 1311
||||| || |||||||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct 1350 GCTGTGACTCTTAGTCTTGCGTTTGCGATGAAGAAAATGATGAACGATAAAGCTCTTGTC 1409
Query 1312 CGCCATTTAGCAGCTTGTGAGACAATGGGATCTGCAACTACCATTTGTAGTGACAAGACT 1371
|| ||||||||||| |||||||| ||||||||||| || || ||||| |||||||||||
Sbjct 1410 CGACATTTAGCAGCATGTGAGACTATGGGATCTGCGACAACGATTTGCAGTGACAAGACC 1469
Query 1372 GGTACATTAACAACAAATCACATGACTGTTGTGAAATCTTGCATTTGTATGAATGTTCAA 1431
|||||| | ||||| ||||||||||| |||||||| ||||||||||| ||||| || |||
Sbjct 1470 GGTACACTCACAACCAATCACATGACCGTTGTGAAGTCTTGCATTTGCATGAACGTGCAA 1529
Query 1432 GATGTAGCTAGCAAAAGTTCTAGTTTACAATCTGATATCCCTGAAGCTGCCT-TGAAACT 1490
|||||||| | ||| ||||||| || ||||| || ||||| ||| |||| | |||| |
Sbjct 1530 GATGTAGCAAATAAAGGTTCTAGCTTGCAATCAGAAATCCCGGAATCTGC-TGTGAAGTT 1588
Query 1491 ACTTC-TCCAGTTGATTTTTAATAATACCGGTGGAGAAGTTGTTGTGAACGAACGTGGCA 1549
|| | ||| |||||| ||||| || || || ||||||||||| ||| ||| || |
Sbjct 1589 G-TTGATTCAGACGATTTTCAATAACACGGGAGGCGAAGTTGTTGTCAACAAACACGGGA 1647
Query 1550 AGACTGAGATATTGGGGACACCAACAGAGACTGCTATATTGGAGTTAGGACTATCTCTTG 1609
| || ||| | |||||||| ||||||||||| |||||||| ||||| || |||||||||
Sbjct 1648 AAACCGAGCTTTTGGGGACGCCAACAGAGACAGCTATATTAGAGTTTGGGTTATCTCTTG 1707
Query 1610 GAGGTAAGTTTCAAGAAGAGAGACAA-TCTAACAAAGTTATTAAAGTTGAGCCTTTTAAC 1668
|||||||||| ||||||||||| || ||| ||||||| || |||||||||||||| |||
Sbjct 1708 GAGGTAAGTTCCAAGAAGAGAGG-AAGTCTTACAAAGTGATCAAAGTTGAGCCTTTCAAC 1766
Query 1669 TCAACAAAGAAAAGAATGGGAGTAGTCATTGAGCTGCCTGAAGGAGGACG-CATTCGCGC 1727
|| |||||||| |||||||||| || || ||||| ||||| |||||| | | | || ||
Sbjct 1767 TCCACAAAGAAGCGAATGGGAGTTGTAATCGAGCTTCCTGAGGGAGGAAGTC-TGCGTGC 1825
Query 1728 TCACACGAAAGGAGCTTCAGAGATAGTTTTAGCGGCTTGTGATAAAGTCATCAACTCAAG 1787
|||||||||||||||||| |||||||||||||| |||||||||||||| | ||||| ||
Sbjct 1826 TCACACGAAAGGAGCTTCCGAGATAGTTTTAGCTGCTTGTGATAAAGTTGTAAACTCGAG 1885
Query 1788 TGGTGAAGTTGTTCCGCTTGATGATGAATCCATCAAGT-TCTTGAATGTTACAATCGATG 1846
|||||||||||||| |||||||| ||||| ||||||| ||| ||||||||| ||| | |
Sbjct 1886 CGGTGAAGTTGTTCCACTTGATGAAGAATCAATCAAGTATCT-GAATGTTACCATCAACG 1944
Query 1847 AGTTTGCAAATGAAGCTCTTCGTACTCTTTGCCTTGCTTATATGGATATCGAAAGCGGGT 1906
||||||| |||||||||||||| |||||||||||||||||||||||||| ||| ||||||
Sbjct 1945 AGTTTGCTAATGAAGCTCTTCGAACTCTTTGCCTTGCTTATATGGATATTGAAGGCGGGT 2004
Query 1907 TTTCGGCTGATGAAGGTATTCCGGAAAAAGGGTTTACATGCATAGGGATTGTTGGTATCA 1966
||||| | ||||| | || |||| || ||||| ||| |||||||||| || ||||
Sbjct 2005 TTTCGCCGGATGATGCAATCCCGGCTTCTGGATTTACTTGCGTAGGGATTGTGGGGATCA 2064
Query 1967 AAGACCCTGTTCGTCCTGGAGTTCGG-GAGTCCGTGGAACTTTGTCGCCGTGCGGGTATT 2025
|||| ||||||||||||||||| | || ||||| || |||||||| ||||| || ||
Sbjct 2065 AAGATCCTGTTCGTCCTGGAGT-CAAAGAATCCGTTGAGCTTTGTCGTCGTGCTGGAATC 2123
Query 2026 A-TGGTGAGAATGGTTACAGGAGATAACATTAACACCGC-AAAGGCTATTGCTAGAGAAT 2083
| || |||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct 2124 ACTG-TGAGAATGGTTACAGGAGATAACATTAACACCGCGAAAG-CAATTGCTAGAGAAT 2181
Query 2084 GTGGAATTCTCACTGATGATGGTATAGCAATTGAAGGTCCTGTGTTTAGAGAGAAGAACC 2143
|||| ||| | |||||||| |||||||| || || ||||| || || ||||||||||| |
Sbjct 2182 GTGGGATTTTAACTGATGACGGTATAGCCATCGAGGGTCCCGTATTCAGAGAGAAGAATC 2241
Query 2144 AAGAAGAGATGCTTGAACTCATTCCCAAGATTCAGGTCATGGCTCGTTCTTCCCCAATGG 2203
|||||||| | || ||||| ||||| ||||||||||| ||||| |||||||| |||||||
Sbjct 2242 AAGAAGAGTTACTAGAACTGATTCCAAAGATTCAGGTGATGGCCCGTTCTTCGCCAATGG 2301
Query 2204 ACAAGCATACACTGGTGAAGCAGTTGAGGACTACTTTTGATGAAGTTGTTGCTGTGACTG 2263
| || |||||||| ||||| ||||| ||||| || |||||||||||||||||||| ||||
Sbjct 2302 ATAAACATACACTTGTGAAACAGTTAAGGACAACGTTTGATGAAGTTGTTGCTGTCACTG 2361
Query 2264 GCGACGGGACAAACGATGCACCAGCGCTCCACGAGGCTGACATAGGATTAGCAATGGGCA 2323
| || || ||||| |||||||| || || || || ||||| || ||| |||| ||||| |
Sbjct 2362 GAGATGGAACAAATGATGCACCTGCACTTCATGAAGCTGATATCGGACTAGCTATGGGAA 2421
Query 2324 TTGCCGGGACTGAAGTAGCGAAAGAGATTGCGGATGTCATCATTCTCGACGATAACTTCA 2383
|||| || |||||||| |||||||||| || ||||||||||||||||||||||||||||
Sbjct 2422 TTGCTGGAACTGAAGTGGCGAAAGAGAGCGCTGATGTCATCATTCTCGACGATAACTTCA 2481
Query 2384 GCACAATCGTCACCGTAGCGAAATGGGGACGTTCTGTTTACATTAACATTCAGAAATTTG 2443
|||| |||||||| || || ||||||||||||||||||||||| ||||| |||||||| |
Sbjct 2482 GCACGATCGTCACAGTTGCTAAATGGGGACGTTCTGTTTACATAAACATACAGAAATTCG 2541
Query 2444 TGCAGTTTCAACTAACAGTCAATGTTGTTGCCCTTATTGTTAACTTCTCTTCAGCTTGCT 2503
| |||||||| || || || ||||||||||| || ||||||||||||||||||||||||
Sbjct 2542 TTCAGTTTCAGCTTACGGTTAATGTTGTTGCTCTGGTTGTTAACTTCTCTTCAGCTTGCT 2601
Query 2504 TGACTGGAAGTGCTCCTCTAACTGCTGTTCAACTGCTTTGGGTTAACATGATCATGGACA 2563
| || |||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||
Sbjct 2602 TAACCGGAAGTGCTCCTTTAACTGCTGTTCAGTTGCTATGGGTGAACATGATCATGGACA 2661
Query 2564 CACTTGGAGCTCTTGCTCTAGCTACAGAACCTCCGAACAACGAGCTGATGAAACGTATGC 2623
||||||||||||||||| |||||||||| || || || ||||||||||||| ||| | |
Sbjct 2662 CACTTGGAGCTCTTGCTTTAGCTACAGAGCCACCAAATGACGAGCTGATGAAGCGTTTAC 2721
Query 2624 CTGTTGGAAGAAGAGGGAATTTCATTACCAATGCGATGTGGAGAAACATCTTAGGACAAG 2683
| |||||||| |||||||||||||| || |||||||||||||| ||||| ||||||||||
Sbjct 2722 CCGTTGGAAGGAGAGGGAATTTCATCACTAATGCGATGTGGAGGAACATTTTAGGACAAG 2781
Query 2684 CTGTGTATCAATTTATTATCATATGGATTCTACAGGCCAAAGGGAAGTCCATGTTTGGTC 2743
|||| |||||||| || |||| |||||||| || |||||||||||||| ||||||||||
Sbjct 2782 CTGTTTATCAATTCATCGTCATTTGGATTCTCCAAGCCAAAGGGAAGTCTATGTTTGGTC 2841
Query 2744 TTGTTGGTTCTGACTCTACTCTCGTATTGAACACACTTATCTTCAACTGCTTTGTATTCT 2803
||| || ||||||| |||||| | || ||||| ||||||||||||||||| || ||||
Sbjct 2842 TTGAAGGCCCTGACTCAACTCTCATGTTAAACACTCTTATCTTCAACTGCTTCGTCTTCT 2901
Query 2804 GCCAGGT-TTTCAATGA-AGTAAGCTCGCGGGAGATGGAAGAGATCGATGTTTTCAAAGG 2861
| ||||| ||| || || | |||||||||| |||||||||||||||||||||||||| ||
Sbjct 2902 GTCAGGTGTTT-AACGAGA-TAAGCTCGCGAGAGATGGAAGAGATCGATGTTTTCAAGGG 2959
Query 2862 CATACTCGACAACTATGT-TTTCGTGGTTGTTATTGGTGCAACAGTTTTCTTTCAGATCA 2920
||||| ||||| || || ||| |||||||| || |||||||| ||||||||||||||||
Sbjct 2960 AATACTGGACAATTACGTCTTT-GTGGTTGTGATCGGTGCAACGGTTTTCTTTCAGATCA 3018
Query 2921 TAATCATTGAGTTCTTGGGCA-CATTTGCAAGCACCACACCTCTTACAATAGTTC-AATG 2978
||||||||||||||||||| | | ||||||||||| ||||| || ||| | | | ||||
Sbjct 3019 TAATCATTGAGTTCTTGGG-ATCTTTTGCAAGCACAACACCACTCACATT-GACCCAATG 3076
Query 2979 GTTCTTCAGCATTTTCGTTGGCTTCTTGGGTATGCCGATCGCTGCTGGCTTGAAGAAAAT 3038
| ||||||| || |||| || |||||||||||||| |||||||| || ||||||| ||
Sbjct 3077 GATCTTCAGTATCGTCGTAGGTTTCTTGGGTATGCCAATCGCTGCAGGATTGAAGACGAT 3136
Query 3039 ACCCGTGTGA 3048
||||| |||
Sbjct 3137 TCCCGTTTGA 3146
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 115108720390
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5