BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G22990.3
Length=1635
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481168 jgi|Araly1|481168|fgenesh2_kg.4__228__AT2G22990.1 2183 0.0
Ahg932271 jgi|Araly1|932271|scaffold_400259.1 1408 0.0
Ahg481172 jgi|Araly1|481172|fgenesh2_kg.4__232__AT2G23010.2 1277 0.0
Ahg481161 jgi|Araly1|481161|fgenesh2_kg.4__221__AT2G22970.3 1103 0.0
Ahg481165 jgi|Araly1|481165|fgenesh2_kg.4__225__AT2G22980.2 909 0.0
Ahg932268 jgi|Araly1|932268|scaffold_400256.1 414 8e-115
> Ahg481168 jgi|Araly1|481168|fgenesh2_kg.4__228__AT2G22990.1
Length=1503
Score = 2183 bits (1182), Expect = 0.0
Identities = 1404/1505 (93%), Gaps = 39/1505 (3%)
Strand=Plus/Plus
Query 8 TTATCATTATTTTATAAAGATCCTATGTCTATCCGTAAATGGACTAATCTTTAGACACAC 67
|||||||||||||||||||||||||||||| ||| |||| ||| |||||||||| || |
Sbjct 2 TTATCATTATTTTATAAAGATCCTATGTCTTTCCCTAAACGGAGTAATCTTTAGCCAAAG 61
Query 68 AG-----AGAATATAATGAGTTTGAAAATAAAGTTTCTGCTTCTGCTTGT-CTTG---T- 117
|| ||||||||||||| ||||||||||||||||||||||||||| | |||| |
Sbjct 62 AGAATTCAGAATATAATGAGATTGAAAATAAAGTTTCTGCTTCTGCTTCTACTTGTCTTA 121
Query 118 A-TCATCATGTTGATTCTGCCTCTATCGTCAAGTTTCTTCCTGGTTTTGAAGGCCCTCTT 176
| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 122 AGTCATCATGTTGATTGTGCCTCTATTGTCAAGTTTCTTCCTGGTTTTGAAGGCCCTCTT 181
Query 177 CCTTTCGAACTTGAAACCGGGTACATTGGTATTGGTGAGGACGAGAATGTGCAATTTTTC 236
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 182 CCTTTCGAACTTGAAACCGGGTACGTTGGTATTGGTGAGGACGAGAATGTGCAATTTTTC 241
Query 237 TACTATTTCATCAAATCTGAAAACAATCCAAAAGAAGATCCTCTTCTTATATGGTTAAAT 296
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 242 TACTATTTCATCAAATCTGAGAACAATCCAAAAGAAGATCCTCTTCTTATATGGTTAAAT 301
Query 297 GGAGGACCTGGATGTTCTTGTCTTGGTGGTATTATTTTTGAGAACGGACCGGTGGGTTTG 356
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 302 GGAGGACCTGGATGTTCTTGTCTCGGTGGTATTCTTTTTGAGAACGGACCGGTGGGTTTG 361
Query 357 AAGTTTGAGGTGTTCAACGGAAGTGCTCCTTCTTTGTTCTCTACTACATATTCATGGACA 416
||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 362 AAGTTCGAGGTGTACAATGGAAGTGCTCCTTCTTTGTTCTCTACTACATATTCATGGACA 421
Query 417 AAGATGGCAAACATTATATTCTTGGATCAGCCAGTAGGATCTGGCTTCTCCTACTCAAAA 476
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 AAGATGGCAAACATAATATTCTTGGATCAGCCAGTAGGATCTGGCTTCTCCTACTCAAAA 481
Query 477 ACTCCAATTGATAAAACTGGTGACATAAGTGAAGTAAAGAGGACCCATGAGTTTCTTCAA 536
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 482 ACTCCAATTGATAAAACTGGTGATATAAGTGAAGTAAAGAGGACCCATGAATTTCTTCAA 541
Query 537 AAGTGGCTAAGCAGGCATCCACAATATTTC-TCCAACCCTTTATATGTAGTTGGAGATTC 595
||||||||||| | |||||||||||||||| | ||||||||| ||||| || ||||||||
Sbjct 542 AAGTGGCTAAGAATGCATCCACAATATTTCAT-CAACCCTTTTTATGTTGTCGGAGATTC 600
Query 596 TTATTCCGGTATGATTGTCCCGGCCCTCGTTCAAGAAATCTCACAAGGAAATTATATATG 655
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 601 TTATTCCGGTATGATTGTCCCGGCCCTCGTTCAAGAAATCTCACAAGGAAACTATATATG 660
Query 656 TTGCGAACCTCCTATAAATCTACAGGGTTATATGCTTGGAAACCCTGTAACATATATGGA 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TTGCGAACCTCCTATAAATCTACAGGGTTATATGCTTGGAAACCCTGTAACATATATGGA 720
Query 716 CTTTGAACAAAACTTCCGCATTCCATATGCTTATGGTATGGGATTAATCTCCGACGAAAT 775
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||
Sbjct 721 CTTTGAACAAAACTTCCGCATTCCATATGCTTATGGCATGGGTTTAATCTCCGATGAGAT 780
Query 776 CTATGAGCCAATGAAGAGAATCTGCAACGGAAATTATTACAATGTGGATCCATCTAACAC 835
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 781 CTATGAGCCAATGAAGAGAAGCTGCAACGGAAATTATTACAATGTGGATCCATCTAACAC 840
Query 836 ACAATGTTTGAAACTTACTGAAGAATATCATAAGTGCACTGCCAAAATAAATATCCATCA 895
| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 841 AAAATGTTTGAAACTTACTGAAGAATACCATAAGTGCACTGACAAAATAAATATCCATCA 900
Query 896 CATATTAACACCAGATTGCGATGTAACCAATGTAACATCTCCTGATTGTTATTATTATCC 955
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 901 TATATTAACACCAGATTGCGATGTAACCAATGTAACATCTCCTGATTGTTATTACTATCC 960
Query 956 ATATCATCTCATTGAATGTTGGGCTAACGACGAGAGCGTTCGCGAAGCTCTTCATATTGA 1015
||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||| |
Sbjct 961 GTATCATCTCATTGAATGTTGGGCCAACGATGAGAGCGTTCGTGAAGCTCTTCATATTAA 1020
Query 1016 AAAGGGTAGTAAAGGAAAATGGGCGCGATGTAATCGGACTATTCCATACAATCACGACAT 1075
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 AAAGGGGAGTAAAGGAAAATGGGCGCGATGTAATCGGACTATTCCATACAATCACGACAT 1080
Query 1076 TGTAAGCAGCATACCATATCACATGAATAACAGCATCAGTGGATACCGATCTCTTATTTA 1135
| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1081 CGAAAGCAGCATACCATATCACATGAATAACAGCATCAGAGGATACCGATCTCTTATTTA 1140
Query 1136 CAGTGGTGATCACGACATCGCGGTCCCTTTTCTTGCAACTCAAGCCTGGATAAGATCTCT 1195
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 TAGTGGTGATCATGACATTGCGGTCCCTTTTCTTGCAACTCAAGCCTGGATAAGATCTCT 1200
Query 1196 CAATTACTCCCCCATTCATAACTGGAGGCCATGGATGATAAACAATCAAATCGCTGGATA 1255
|||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct 1201 CAATTACTCCCCCATTCATAACTGGAGGCCTTGGATGATAAATAATCAAATTGCTGGATA 1260
Query 1256 CACGAGAGCTTATTCCAATAAGATGACATTTGCTACTATCAAAGCAAGTGTGGACACACG 1315
|||||||||||| ||||||||||||||||||||||||||||||| | | |||||||||||
Sbjct 1261 CACGAGAGCTTACTCCAATAAGATGACATTTGCTACTATCAAAGGA-G-GTGGACACACG 1318
Query 1316 GCAGAGTATAGACCAAACGAGACCTTTATCATGTTCCAAAGGTGGATCAGTGGCCAACCC 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 GCAGAGTATAGACCAAACGAGACCTTTATCATGTTCCAAAGGTGGATCAGTGGCCAACTT 1378
Query 1376 CTGTAACAAAAGGCTTATGACCTTCACCTATAATTATCTACCAACTAATATCCACGTTAA 1435
|||||| |||| |||| | | ||| | | | | | || ||||||||||||
Sbjct 1379 CTGTAATAAAAA--TTAT--C-T--ACC-A-AGT-A---A-----TA-TATCCACGTTAA 1419
Query 1436 GCGCAgttgtttgt-gttgaaatgtttttgttgtttgctttgttgcattcttttgtgctt 1494
||||||||||||| || ||||||||||||||||||| ||||||||||| |||| | ||
Sbjct 1420 CCGCAGTTGTTTGTTGT-GAAATGTTTTTGTTGTTTGATTTGTTGCATT-TTTTAT--TT 1475
Query 1495 tatgt 1499
|||||
Sbjct 1476 TATGT 1480
> Ahg932271 jgi|Araly1|932271|scaffold_400259.1
Length=1354
Score = 1408 bits (762), Expect = 0.0
Identities = 1135/1314 (86%), Gaps = 30/1314 (2%)
Strand=Plus/Plus
Query 95 GTTTCTGCTTCTGCTTGTCTTGTA-TCATCATGTTGATTCTGCCTCTATCGTCAAGTTTC 153
|||||||||||||||||||||| | ||||||||||||||||||| ||| ||||||| ||
Sbjct 44 GTTTCTGCTTCTGCTTGTCTTG-AGTCATCATGTTGATTCTGCCAATATAGTCAAGTCTC 102
Query 154 TTCCTGGTTTTGAAGGCCCTCTTCCTTTCGAACTTGAAACCGGGTACATTGGTATTGGTG 213
|||||||||| |||||| ||||||||||||||| |||||||||||||| |||||||| |
Sbjct 103 TTCCTGGTTTGGAAGGCAATCTTCCTTTCGAACTCGAAACCGGGTACATCGGTATTGGAG 162
Query 214 AGGACGAGAATGTGCAATTTTTCTACTATTTCATCAAATCTGAAAACAATCCAAAAGAAG 273
|||||||| | | |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 163 AGGACGAGGACATCCAATTTTTCTACTACTTCATCAAATCTGAAAACAATCCAAAAGAAG 222
Query 274 ATCCTCTTCTTATATGGTTAAATGGAGGACCTGGATGTTCTTGTCTTGGTGGTATTATTT 333
| ||||||||| |||||||| ||||||||||||||||||||| ||| ||||| || |||
Sbjct 223 ACCCTCTTCTTCTATGGTTAGATGGAGGACCTGGATGTTCTTCTCTCGGTGGCCTTCTTT 282
Query 334 TTGAGAACGGACCGGTGGGTTTGAAGTTTGAGGTGTTCAACGGAAGTGCTCCTTCTTTGT 393
||||||| |||||||||| |||||||| | ||| | ||| |||||| | ||||||||||
Sbjct 283 TTGAGAATGGACCGGTGGCTTTGAAGTCCGCGGTCTACAATGGAAGTACCCCTTCTTTGT 342
Query 394 TCTCTACTACATATTCATGGACAAAGATGGCAAACATTATATTCTTGGATCAGCCAGTAG 453
||||||||||||||||||||||||||||||||||||| |||| |||||||||||| || |
Sbjct 343 TCTCTACTACATATTCATGGACAAAGATGGCAAACATAATATACTTGGATCAGCCTGTTG 402
Query 454 GATCTGGCTTCTCCTACTCAAAAACTCCAATTGATAAAACTGGTGACATAAGTGAAGTAA 513
||||||||||||||||||||| |||||||||||| |||||| |||||| ||||||||| |
Sbjct 403 GATCTGGCTTCTCCTACTCAAGAACTCCAATTGAAAAAACTAGTGACACAAGTGAAGTTA 462
Query 514 AGAGGACCCATGAGTTTCTTCAAAAGTGGCTAAGCAGGCATCCACAATATTTCTCCAACC 573
|||||| |||||||||||||||||||||||| |||| |||||||| | |||||||||||
Sbjct 463 AGAGGATCCATGAGTTTCTTCAAAAGTGGCTTAGCAAACATCCACAGTTTTTCTCCAACC 522
Query 574 CTTTATATGT-A-GTTGGAGATTCTTATTCCGGTATGATTGTCCCGGCCCTCGTTCAAGA 631
|||| || || | | |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 523 CTTTTTACGTCACG--GGAGATTCTTATTCCGGTATGATTGTTCCGGCACTCGTTCAAGA 580
Query 632 AATCTCACAAGGAAATTATATATGTTGCGAACCTCCTATAAATCTACAGGGTTATATGCT 691
|||||| |||||||||||||||||||| |||||| |||||||||||||||||| ||||
Sbjct 581 GATCTCAAAAGGAAATTATATATGTTGCAAACCTCTTATAAATCTACAGGGTTACGTGCT 640
Query 692 TGGAAACCCTG-TAACATATA-TGGACTTTGAACAAAACT-TCCGCATTCCATATGCTTA 748
|||||||| | |||||||| || || ||| |||||| || | ||||| | |||| |
Sbjct 641 CGGAAACCC-GATAACATATGCTGAACAC-GAAAAAAACTATC-GTATTCCGTTTGCTCA 697
Query 749 TGGTATGGGATTAATCTCCGACGAAATCTATGAGCCAATGAAGAGAATCTGCAACGGAAA 808
||| ||| ||||||||| || ||| |||| || || ||||||||| |||||| |||||
Sbjct 698 TGGAATGTCATTAATCTCTGATGAACTCTACGAATCATTGAAGAGAACCTGCAAAGGAAA 757
Query 809 TTATTACAATGTGGATCCATCTAACACACAA-TGTTTGAAACTTACTGAAGAATATCATA 867
|||| | |||||||||||| ||||||| || |||||||||||| ||||||||| ||||
Sbjct 758 TTATGAAAATGTGGATCCAAGTAACACA-AAGTGTTTGAAACTTGTTGAAGAATACCATA 816
Query 868 AGTGCACTGCCAAAATAAATATC-CATCACATATTAACACCAGATTGCGATGTAAC---- 922
||||||||| ||||||||||| | || || ||||||| ||||||||||||| ||
Sbjct 817 AGTGCACTGACAAAATAAATA-CACAACATATATTAATACCAGATTGCGATAAAAAAGGG 875
Query 923 CAATG---TAACATCTCCTGATTGTTATTATTATCCATATCATCTCATTGAATGTTGGGC 979
|| || |||| |||||||||| |||||||||| ||| ||||||||||||||||||
Sbjct 876 CA-TGGAATAACCCCTCCTGATTGCTATTATTATCTGTATTTTCTCATTGAATGTTGGGC 934
Query 980 TAACGACGAGAGCGTTCGCGAAGCTCTTCATATTGAAAAGGGTAGTAAAGGAAAATGGGC 1039
||| ||||| | ||||| |||||||||||| || ||||||| | ||||||| ||||| |
Sbjct 935 CAACAACGAGGGAGTTCGTGAAGCTCTTCATGTTAAAAAGGGAACTAAAGGACAATGG-C 993
Query 1040 -GCGATGTAATCGGACTATTCCATACAATCACGACATTGTAAGCAGCATACCATATCACA 1098
|||||||||| |||| ||| ||||| || || ||||| |||||||| |||| ||||| |
Sbjct 994 AGCGATGTAATTGGACAATTTCATACGATAACAACATTATAAGCAGCGTACCCTATCATA 1053
Query 1099 TGAATAACAGCATCAGTGGATACCGATCTCTTATTTACAGTGGTGATCACGACATCGCGG 1158
||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
Sbjct 1054 TGAATAACAGCATCAGTGGATACCGATCTCTTATTTATAGTGGTGATCATGACATCACAA 1113
Query 1159 TCCCTTTTCTTGCAACTCAAGCCTGGATAAGATCTCTCAATTACTCCCCCATTCATAACT 1218
| ||||| | ||||||||||| ||||||| |||||| ||||||||| ||||||| |||
Sbjct 1114 TGCCTTTCCAAGCAACTCAAGCATGGATAAAATCTCTAAATTACTCCATCATTCATGACT 1173
Query 1219 GGAGGCCATGGATGATAAACAATCAAATCGCTGGATACACGAGAGCTTATTCCAATAAGA 1278
||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 1174 GGAGGCCTTGGATGATAAAGGATCAAATCGCTGGATACACGAGAACTTATTCCAATAAGA 1233
Query 1279 TGACATTTGCTACTATCAAAGCAAGTGTGGACACACGGCAGAGTATAGACCAAACGAGAC 1338
||||||||||||||||||||| | | |||||||||| ||||| ||| ||||||||||||
Sbjct 1234 TGACATTTGCTACTATCAAAGGA-G-GTGGACACACTGCAGAATATCTACCAAACGAGAC 1291
Query 1339 CTTTATCATGTTCCAAAGGTGGATCAGTGGCCAACCCCTGTAACAA-A-AGGCT 1390
|||||| ||||||||||||||||||||||||||||| ||||| || | |||||
Sbjct 1292 CTTTATAATGTTCCAAAGGTGGATCAGTGGCCAACCTTTGTAATAATAGAGGCT 1345
> Ahg481172 jgi|Araly1|481172|fgenesh2_kg.4__232__AT2G23010.2
Length=1376
Score = 1277 bits (691), Expect = 0.0
Identities = 1118/1318 (85%), Gaps = 53/1318 (4%)
Strand=Plus/Plus
Query 94 AGTTTCTGCTTCTGCTTGT-CTTGT-ATCA-TCATGTTGATTCT-G--C--C-TCTATCG 144
||||||||||||| ||| | ||||| | | ||||||||||||| | | | |||||||
Sbjct 5 AGTTTCTGCTTCTTCTTCTACTTGTCTTGAGTCATGTTGATTCTGGTTCTACTTCTATCG 64
Query 145 TCAAGTTTCTTCCTGGTTTTGAAGGCCCTCTTCCTTTCGAACTTGAAACCGGGTACATTG 204
||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct 65 TCAAGTTTCTTCCTGGTTTTGAAGGTCCTCTTCCTTTCGAGCTCGAAACCGGGTACATTG 124
Query 205 GTATTGGTGAGGACGAGAATGTGCAATTTTTCTACTATTTCATCAAATCTGAAAACAATC 264
|||||||||| || |||||||||||||||||||||||||||||||||||||| || || |
Sbjct 125 GTATTGGTGAAGATGAGAATGTGCAATTTTTCTACTATTTCATCAAATCTGAGAAGAA-C 183
Query 265 C-AAAAGAAGATCCTCTTCTTATATGGTTAAATGGAGGACCTGGATGTTCTTGTCTTGGT 323
| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 184 CTGGAAGAAGATCCTCTTCTTATATGGTTAAATGGAGGACCTGGATGTTCTTGTCTCAGT 243
Query 324 GGTATTATTTTTGAGAACGGACCGGTGGGTTTGAAGTTTGAGGTGTT-CAACGGAAGTGC 382
|| || |||||||||||||||| ||| ||||||| ||||| || ||| || | ||
Sbjct 244 GGCCTTTTTTTTGAGAACGGACCTTTGGCTTTGAAGAACGAGGT-TTACAATGGCACTG- 301
Query 383 TCC-TTCTTTGTTCTCTACTACATATTCATGGACAAAGATGGCAAACATTATATTCTTGG 441
||| ||||||| | ||||||||||||||||||||||||| ||||||||| |||| |||||
Sbjct 302 TCCCTTCTTTGGTATCTACTACATATTCATGGACAAAGACGGCAAACATAATATACTTGG 361
Query 442 ATCAGCCAGTAGGATCTGGCTTCTCCTACTCAAAAACTCCAATTGATAAAACTGGTGACA 501
||||||| || |||||||||||||| ||||||| || ||||||||| |||||| ||||||
Sbjct 362 ATCAGCCTGTTGGATCTGGCTTCTCTTACTCAAGAATTCCAATTGAAAAAACTAGTGACA 421
Query 502 TAAGTGAAGTAAAGAGGACCCATGAGTTTCTTCAAAAGTGGCTAAGCAGGCATCCACAAT 561
||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| |
Sbjct 422 CAAGTGAAGTTAAGAGGATCCATGAGTTTCTTCAAAAGTGGCTAAGCAAGCATCCACAGT 481
Query 562 ATTTCTCCAACCCTTTATATGTAGTTGGAGATTCTTATTCCGGTATGATTGTCCCGGCCC 621
||||||||||||||| || || || |||||||||||||| || |||||||| |||||||
Sbjct 482 TTTTCTCCAACCCTTTTTACGTTGTAGGAGATTCTTATTCGGGCATGATTGTTCCGGCCC 541
Query 622 TCGTTCAAGAAATCTCACAA-GGAAATTATATATGTTGCGAACC-TCCTATAAATCTACA 679
||||||||||||||||| || || ||||||||||||||| |||| |||||||||||||||
Sbjct 542 TCGTTCAAGAAATCTCA-AATGGGAATTATATATGTTGC-AACCCTCCTATAAATCTACA 599
Query 680 GGGTTATATGCTTGGAAACCCTG-TAACATATATGGACTTTGAACAAAACTTCCGCATTC 738
||||||| |||| || || || | ||||| |||| || |||||||||||||| |||||||
Sbjct 600 GGGTTATGTGCTCGGCAATCC-GATAACACATATTGAATTTGAACAAAACTTTCGCATTC 658
Query 739 CATATGCTTATGGTATGGGATTAATCTCCGACGAAATCTATGAGCCAATGAAGAGAATCT 798
|||||||| |||| ||| ||||||||| || ||| |||| || |||||||||||||||
Sbjct 659 CATATGCTCATGGAATGTCATTAATCTCTGATGAACTCTACAAGTCAATGAAGAGAATCT 718
Query 799 GCAACGGAAATTATTACAATGTGGATCCATC-TAACACACAATGTTTGAAACTTACTGAA 857
|||| |||||||||| ||||||||||||| | ||||||| |||||||||| ||| ||||
Sbjct 719 GCAAGGGAAATTATTTCAATGTGGATCCA-CGTAACACAGAATGTTTGAAGCTTGTTGAA 777
Query 858 GAATATCATAAGTGCACTGCCAAAATAAATATCCATCACATATTAACACCAGATTGCGAT 917
||||| |||| ||| |||| ||||||||||| |||||| | ||||| | ||| ||| |||
Sbjct 778 GAATACCATATGTGTACTGACAAAATAAATAGCCATCATACATTAATAGCAGGTTGTGAT 837
Query 918 G--T-AA-C-CAATGTA-ACATCTCCTGATTGTTATTATTATCCATATCATCTCATTGAA 971
| | || | |||| | | |||||||||||| ||||||||||| ||||||||| |||||
Sbjct 838 GACTCAAACACAATCCACATATCTCCTGATTGCTATTATTATCCGTATCATCTCGTTGAA 897
Query 972 TGTTGGGCTAACGAC-GAGAGCGTTCGCGAAGCTCTTCATATTGAA-AAGG-GTAGTAAA 1028
|||||||| || || || ||||||||| ||||||||||| || | || | | || | |
Sbjct 898 TGTTGGGCCAAT-ACCGATAGCGTTCGCAAAGCTCTTCATGTT-ATTAATGCG-AGCATA 954
Query 1029 GGAAAATGGGCGCGATG-TAATCG-GACTATTCCATACAATCACGACATTGTAAGCAGCA 1086
||| ||||| ||| | |||||| | |||||||||||||| ||||||| | ||| ||
Sbjct 955 GGAGAATGGATACGA-GATAATCGTGG-TATTCCATACAATCGCGACATTATGAGCGGCG 1012
Query 1087 TACCATATCACATGAATAACAGCATCAGTGGATACCGATCTCTTAT-TTACAGTGGTGAT 1145
||||||| || |||||||||||||||| ||| || |||||||| || || ||||||||||
Sbjct 1013 TACCATACCATATGAATAACAGCATCAATGGTTATCGATCTCTCATCTT-CAGTGGTGAT 1071
Query 1146 CACGACATCGCGGTCCCTTTTCTTGCAACTCAAGCCTGGATAAGATCTCTCAATTACTCC 1205
|| | |||| | | ||||| | |||||||| |||||||||| |||||| |||||||||
Sbjct 1072 CATGGCATCACAATGCCTTTCCAAGCAACTCAGGCCTGGATAAAATCTCTAAATTACTCC 1131
Query 1206 CCCATTCATAACTGGAGGCCATGGATGATAAACA-ATCAAATCGCTGGATACACGAGAGC 1264
|| | || |||||||||| ||||||||||| | ||||||||||||||||||||||| |
Sbjct 1132 ATCACTGATGACTGGAGGCCTTGGATGATAAA-AGATCAAATCGCTGGATACACGAGAAC 1190
Query 1265 TTATTCCAATAAGATGACATTTGCTACTATCAAAGCAAGTGTGGACACACGGCAGAGTAT 1324
|| |||||||||||||||||||||||| | | | | ||||||||||||||||||||
Sbjct 1191 TTTTTCCAATAAGATGACATTTGCTAC-AG----G-A-G-GTGGACACACGGCAGAGTAT 1242
Query 1325 AGACCAAACGAGACCTT-TATCATGTTCCAAAGGTGGATCAGTGGCCAACCCCTGTAA 1381
||||||||||| || ||||||||||||||||||| |||||||||| || |||||
Sbjct 1243 CTACCAAACGAGAG-TTCTATCATGTTCCAAAGGTGGCTCAGTGGCCAGCCTTTGTAA 1299
> Ahg481161 jgi|Araly1|481161|fgenesh2_kg.4__221__AT2G22970.3
Length=1574
Score = 1103 bits (597), Expect = 0.0
Identities = 1086/1312 (83%), Gaps = 74/1312 (6%)
Strand=Plus/Plus
Query 97 TTCTGCTTCTGCTTGTCTTGTATCATCATGTTGATTCTGCCTCTATCGTCAAGTTTCTTC 156
||||||||||| || ||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 48 TTCTGCTTCTGTTTATCTTGAATCATCATGTTGATTCTGGCTCTATCGTCAAGTTTCTTC 107
Query 157 CTGGTTTTGAAGGCCCTCTTCCTTTCGAACTTGAAACCGGGTACATTGGTATTGGTGAGG 216
| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 108 CCGGCTTTGAAGGCCCTCTTCCTTTCGAACTCGAAACCGGGTACATTGGTATTGGTGAGG 167
Query 217 ACGAG-AATGTGCAATT-TTTCTACTATTTCATCAAATCTGAAAACAATCCAAAAGAAGA 274
| ||| ||| ||| || ||| |||||||||||||||||||| |||||||||||||||||
Sbjct 168 AAGAGGAATC-GCAGTTGTTT-TACTATTTCATCAAATCTGAGAACAATCCAAAAGAAGA 225
Query 275 TCCTCTTCTTATATGGTTAAATGGAGGACCTGGATGTTCTTGTCTTGGTGGTATTATTTT 334
||||||||| | |||||||||||||||||||||||||||| | | ||| || ||||
Sbjct 226 CCCTCTTCTTCTCTGGTTAAATGGAGGACCTGGATGTTCTTCTATCACTGGCCTT-TTTT 284
Query 335 T-GAGAACGGACCGGTGGGTTTGAAGTTTGAGGTGTT-CAACGGAAGTGCTCC-TTCTTT 391
| ||||| ||||| ||| ||||||||| ||||| || ||| ||||||| ||| ||||||
Sbjct 285 TCGAGAATGGACCTCTGGCTTTGAAGTTAGAGGT-TTACAATGGAAGTG-TCCCTTCTTT 342
Query 392 GTTCTCTACTACATATTCATGGACAAAGATGGCAAACATTATATTCTTGGATCAGCCAGT 451
| |||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||| ||
Sbjct 343 GGTCTCTACTACATATTCGTGGACAAAGATGGCGAACATAATATTTTTGGATCAGCCTGT 402
Query 452 AGGATCTGGCTTCTCCTACTCAAAAACTCCA---ATTGATAAAACTGGTGACATAAGTGA 508
||| |||||||||||||||||| ||| ||| |||||||| || |||||| ||| ||
Sbjct 403 TGGAACTGGCTTCTCCTACTCAAGAACCCCACTTATTGATAAGCCTAGTGACACAAGAGA 462
Query 509 AGTAAAGAGGACCCATGAGTTTCTTCAAAAGTGGCTAAGCAGGCATCCACAATATTTCT- 567
||| ||||||| || |||||||||||||||||||||||||| |||||||| | |||||
Sbjct 463 AGTTAAGAGGATCCGTGAGTTTCTTCAAAAGTGGCTAAGCAATCATCCACAGT-TTTCTT 521
Query 568 CCAACCCTTTATATG-TAGTTGGAGATTCTTATTCCGGTATGATTGTCCCGGCCCTCGTT 626
|||||||||| |||| ||| |||||||||||||||||||||||||| || |||||||||
Sbjct 522 CCAACCCTTTTTATGCTAGC-GGAGATTCTTATTCCGGTATGATTGTTCCAGCCCTCGTT 580
Query 627 CAAGAAATCTC-ACAAGGAAATTATATATGTTGCGAACC-TCCTATAAATCTACAGGGTT 684
||||||||||| | |||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 581 CAAGAAATCTCTA-AAGGAAATTATATATGTTGC-AACCCTCCTATAAATCTACAGGGTT 638
Query 685 ATATGCTTGGAAACCCTG-TAACATATATGGACTTTGAACAAAACT-TCCGCATTCCATA 742
|||| || || ||||| | ||||| || | || || | ||||| || || ||||||
Sbjct 639 ATATACTCGGGAACCC-GATAACAAATTTTGAAGAAGACCGAAACTATC-GCGTTCCATT 696
Query 743 TGCTTATGGTATGGGATTAATCTCCGACGAAATCTATGAGCCAATGAAGAGAATCTGCAA 802
| || |||| |||| | |||| || || ||| | || ||| |||| | |||| ||||||
Sbjct 697 TTCTCATGGAATGGCACTAATTTCAGATGAACTATACGAGTCAATTAGGAGAGCCTGCAA 756
Query 803 CGGAAATTATTACAATGTGGATCCATC-TAACACACAATGTTTGAAACTTACTGAAGAAT 861
||||||||||| ||||||||||| | | ||||||| |||||||||||||| ||||||||
Sbjct 757 CGGAAATTATTTCAATGTGGATCAA-CGTAACACAAAATGTTTGAAACTTGTTGAAGAAT 815
Query 862 ATCATAAGTGCACTGCCAAAATAAATATCCAT-CACATAT--TAACACCAGATTGCGATG 918
| |||||||| || | |||| |||||| || | ||||| || |||||||||||||
Sbjct 816 ACCATAAGTGTACCGACAAACTAAATAG--ATTC-CATATACTATCACCAGATTGCGA-- 870
Query 919 TAACCAATGTAACATCTCCTGATTG-TTATTATTATCCATATCATCTCATT-GAATGTTG 976
| | | ||||||||||||||| || |||| | |||||| ||||| || | | ||
Sbjct 871 ---C-A-T--AACATCTCCTGATTGCTTTTTAT-ACCCATATTATCTCCTTAGC-TACTG 921
Query 977 GGCTAACGACGAGAGCGTTCGCGAA-GCTCTTCATATTGAA-AAG-GGTAGTAAAGGAAA 1033
||| |||||||||||||||||| || ||||||||| || || ||| || |||| |||| |
Sbjct 922 GGCCAACGACGAGAGCGTTCGC-AATGCTCTTCATGTT-AATAAGTGG-AGTATAGGAGA 978
Query 1034 ATGGGCGCGATGTAATCGGACTATTCCATACAATCACG-ACATTGTA-AGCAGCATACCA 1091
||||| |||||||||| ||| || |||||||| || | |||| | |||||| |||||
Sbjct 979 ATGGGTGCGATGTAATAGGAGTAAACCATACAA-CAAGGACATCA-AGAGCAGCGTACCA 1036
Query 1092 TATCACATGAATAACAGCATCAGTGGATACCGATCTCTTATTTACAGTGGTGATCACGAC 1151
|| || ||||||||||| || | ||| ||||||||||| || |||||||||||||| ||
Sbjct 1037 TACCATATGAATAACAGTATTAATGGTTACCGATCTCTCATCTACAGTGGTGATCATGAT 1096
Query 1152 ATCGCGGTCCCTTTTCTTGCAACTCAAGCCTGGATAAGATCTCTCAATTACTCCCCCATT 1211
| | ||| ||||| | ||||||||||| ||||||| |||||| ||||||||| ||||
Sbjct 1097 TTGGTGGTTCCTTTCCAAGCAACTCAAGCATGGATAAAATCTCTAAATTACTCCATCATT 1156
Query 1212 CAT-AACTGGAGGCCATGGATGAT-AAACAATCAAATCGCTGGATACACGAGAGCTTATT 1269
||| || ||||| || |||||||| ||| | |||||||||||||||||| ||| ||||||
Sbjct 1157 CATGAA-TGGAGACCTTGGATGATTAAAGA-TCAAATCGCTGGATACACAAGAACTTATT 1214
Query 1270 CCAATAAGATGACATTTGCTACTATCAAAGCAAGTGTGGACACACGGCAGAGTATAGACC 1329
||||||||||||| ||||||||| ||||||||| | | | | | | || | |||
Sbjct 1215 CCAATAAGATGACTTTTGCTACTGTCAAAGCAA-TA-G-A-----G--A-A-TA-A-ACC 1260
Query 1330 AAACGAGACCTTTATCATGTTCCAAAGGTGGATCAGTGGCCAACCCCTGTAA 1381
||| |||| ||||||||||| ||||||||||| | ||||||||| |||||
Sbjct 1261 AAATGAGAGTTTTATCATGTTTCAAAGGTGGATTAATGGCCAACCTTTGTAA 1312
> Ahg481165 jgi|Araly1|481165|fgenesh2_kg.4__225__AT2G22980.2
Length=1378
Score = 909 bits (492), Expect = 0.0
Identities = 996/1228 (81%), Gaps = 80/1228 (7%)
Strand=Plus/Plus
Query 108 CTTGTCTTGTA-TCATCATGTTGATTCTGCCTCTATCGTCAAGTTTCTTCCTGGTTTTGA 166
||||||||| | | | |||| | |||||| |||||| ||||| |||||||||||||||||
Sbjct 172 CTTGTCTTG-AGTTACCATGCTCATTCTGGCTCTATTGTCAAATTTCTTCCTGGTTTTGA 230
Query 167 AGGCCCTCTTCCTTTCGAACTTGAAACCGGGTACATTGGTATTGGTGAGGACGAG-AATG 225
||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| || |
Sbjct 231 AGGCCCTCTTCCTTTTGAACTTGAAACCGGGTATATTGGTATTGGTGAGGAAGAGGAA-G 289
Query 226 TGCAATT-TTTCTACTATTTCATCAAATCTGAAAACAATCCAAAAGAAGATCCTCTTCTT 284
||||||| ||| ||||||||||| |||||||| || |||||||||||||| |||||||||
Sbjct 290 TGCAATTGTTT-TACTATTTCATAAAATCTGAGAAGAATCCAAAAGAAGACCCTCTTCTT 348
Query 285 ATATGGTTAAATGGAGGACCTGGATGTTCTTGTCTTGGTGGTATTATTTTTGAGAACGGA 344
||||||||| |||||| ||||||||||| | ||| ||| || |||||||||| |||
Sbjct 349 CTATGGTTAACTGGAGGGCCTGGATGTTCCTCTCTCACTGGCCTTCTTTTTGAGAATGGA 408
Query 345 CCGGTGGGTTTGAAGTTTGAGGTGTT-CAACGGAAGTGCTCCTTCTTTGTTCTCTACTAC 403
||||||| ||||||||||||||| || ||| ||||||| ||| |||||| ||||||||||
Sbjct 409 CCGGTGGCTTTGAAGTTTGAGGT-TTACAATGGAAGTGTTCCATCTTTGGTCTCTACTAC 467
Query 404 ATATTCATGGACAAAGATGGCAAACATTATATTCTTGGATCAGCCAGTAGGATCTGGCTT 463
||||||||||||||||||||| ||||| ||||||||||||||||| || ||| |||||||
Sbjct 468 ATATTCATGGACAAAGATGGCCAACATAATATTCTTGGATCAGCCTGTTGGAGCTGGCTT 527
Query 464 CTCCTACTCAAAAACTCCAATTG---ATAAAACTGGTGACATAAGTGAAGT-AAAGAGGA 519
|||||| |||| ||||||| ||| |||||| | |||||| ||||||| |||| |||
Sbjct 528 CTCCTATTCAAGAACTCCACTTGTTGATAAAATTAGTGACACGGGTGAAGTTAAAG-GGA 586
Query 520 CCCATGAGTTTCTTCAAAAGTGGCTAAGCAGGCATCCACAATATTTCTCCAACCCTTTAT 579
| |||||||||||||||||||| |||||| |||| ||||| ||| ||||||||||| |
Sbjct 587 TCTATGAGTTTCTTCAAAAGTGGTTAAGCAAACATCAACAATTTTTTTCCAACCCTTT-T 645
Query 580 -ATGTAGTTGGAGATTCTTATTCCGGTATGATTGT-CCCGGCCCTCGTTCAAGAAATCT- 636
|||| | ||||||||||||||||||||| |||| |||| |||| ||||||||||| |
Sbjct 646 CATGTTGGCGGAGATTCTTATTCCGGTATGGTTGTTCCCG-CCCTAGTTCAAGAAAT-TG 703
Query 637 CACAAGGAAATTATATATGTTGCGAACCTCCTATAAATCTACAGGGTTATATGCTTGGAA 696
|| ||||||||||| | || |||||||||||||||||||| || ||||
Sbjct 704 CAAAAGGAAATTAT--------C-AA------ATAAATCTACAGGGTTATATCCTCGGAA 748
Query 697 ACCCTG-TAACATATA-TGGACTTTGAACAAAACT-TCCGCATTCCATATGCTTATGGTA 753
|||| | ||||| ||| || | | |||||| |||| || | |||||||||||| |||| |
Sbjct 749 ACCC-GATAACAGATACTGAA-TCTGAACAGAACTATCAG-ATTCCATATGCTCATGGAA 805
Query 754 TGGGATTAATCTCCGACGAAATCTATGAGCCAATGAAGAGAATCTGCAACGGAAATTAT- 812
||| ||||||||| || ||| | || ||| ||||||||||||||||||| | |||||||
Sbjct 806 TGGCATTAATCTCTGATGAACTATACGAGTCAATGAAGAGAATCTGCAAAGAAAATTATG 865
Query 813 TACAATGTGGATCCATCT-AACACACAATGTT-TGAAACTTACTGAA-GAATATCATAAG 869
| ||||||||| || || |||||| |||| | | ||||| | | || || ||||| |||
Sbjct 866 TG-AATGTGGATGCA-CTTAACACAAAATGCTAT-AAACTCA-TAAAAGATTATCAAAAG 921
Query 870 TGCACTGCCA-AAA-TAAATATCCATCACATATTAACACCAGATTGCGATGTAACCAATG 927
|| | | | | ||| | |||| |||| |||||| ||| || |||||| | |
Sbjct 922 TGTATT-C-ATAAACTGAATAAGTATCATATATTATTACCTGACTGCGAT--A-----T- 971
Query 928 TAACATCTCCTGATTG-TTATTATTATCCATAT-CATCTCATTGAA-TGTTGGGCTAACG 984
||||||||||||||| || |||| || ||| | |||||| || | |||||| ||||
Sbjct 972 -AACATCTCCTGATTGCTTTTTAT-ATAGGTATTC-TCTCAT-GACCTTTTGGGCCAACG 1027
Query 985 ACGAGAGCGTTCGCGAAGCTCTTCATATTGAA-AAGGGTAGTAAAGGAAAATGGGCGCGA 1043
|| |||||||||||| |||||| || | | || ||||| |||| |||| |||||| || |
Sbjct 1028 ACAAGAGCGTTCGCGGAGCTCTGCA-AGTCAATAAGGGAAGTATAGGAGAATGGGTGCAA 1086
Query 1044 TGTAA-TCGGAC--TATTCCATACAATCACGACATTGTA-AGCAGCATAC-CATATCACA 1098
||||| | | |||| | || ||| ||||||| | |||||| | | |||| || |
Sbjct 1087 TGTAACTATAAAAATATTTCGTATAATTACGACATCA-AGAGCAGCGT-CGCATACCATA 1144
Query 1099 TGAATAACAGCATC-AGTGGATACCGATCTCTTATTTACAGTGGTGATCACGACATCGC- 1156
|||| || || || | ||| |||||||||||||| |||| |||||| || || || |
Sbjct 1145 TGAAGAATAGTATTGA-TGGCTACCGATCTCTTATCTACAATGGTGACCATGATAT-GAT 1202
Query 1157 GGTCCCTTTTCTTGCAACTCAAGCCTGGATAAGATCTCTCAATTACTCCCCCATTCATAA 1216
||| ||||| ||||||||||||||||||||||||||||||||||| ||| || | || |
Sbjct 1203 GGTGCCTTTCCTTGCAACTCAAGCCTGGATAAGATCTCTCAATTATTCCATCACTGATGA 1262
Query 1217 CTGGAGGCCATGGATGATAAACAATCAAATCGCTGGATACACGAGAGCTTATTCCAATAA 1276
|||||||| |||||||||||| |||||||||||||||| || ||| |||||||||||||
Sbjct 1263 TTGGAGGCCTTGGATGATAAACGATCAAATCGCTGGATATACAAGAACTTATTCCAATAA 1322
Query 1277 GATGACATTTGCTACTATCAAAGCAAGT 1304
|||||||||||||||||||| ||||||
Sbjct 1323 AATGACATTTGCTACTATCAAGGCAAGT 1350
> Ahg932268 jgi|Araly1|932268|scaffold_400256.1
Length=604
Score = 414 bits (224), Expect = 8e-115
Identities = 364/431 (84%), Gaps = 11/431 (3%)
Strand=Plus/Plus
Query 974 TTGGGCTAACGACGAGAGCGTTCGCGAAGCTCTTCATATTGA-AAAGGGTAGTAAAGGAA 1032
|||||| || ||||||| ||||| ||||||||||| | | | ||||| |||| |||||
Sbjct 179 TTGGGCCAATAACGAGAGGGTTCGTGAAGCTCTTCA-AATCAGGAAGGGAAGTATAGGAA 237
Query 1033 AATGGGCGCGATGTAATCGGACTATTCCA-TACAATCACGACATTGTAAGCAGCATACCA 1091
||||| ||||||||| ||| |||| | |||||| | |||||| | ||||||||||||
Sbjct 238 AATGGATACGATGTAATAGGAATATT-GATTACAATGAAGACATTATTAGCAGCATACCA 296
Query 1092 TATCACATGAATAACAGCATCAGTGGATACCGATCTCTTATTTACAGTGGTGATCACGAC 1151
||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 297 TATCATATGAATAACAGCATCAACGGATACCGATCTCTTATTTACAGTGGTGATCACGAC 356
Query 1152 ATCGCGGTCCCTTTTCTTGCAACTCAAGCCTGGATAAGATCTCTCAATTACTCCCC-CAT 1210
|| | ||| ||||| ||||||||| |||| |||||||||||||||||||| ||| |||
Sbjct 357 ATGGAGGTACCTTTCCTTGCAACTGAAGCTTGGATAAGATCTCTCAATTA-TCCTATCAT 415
Query 1211 TCATAACTGGAGGCCATGGATGATAAACAATCAAATCGCTGGATACACGA-GAGCTTATT 1269
| || | |||||||| ||||| ||||||||||| || ||||||||||||| || || ||
Sbjct 416 TGATGATTGGAGGCCTTGGATAATAAACAATCAGATTGCTGGATACACGATGACCT-ATG 474
Query 1270 CCAATAAGATGACATTTGCTACTATCAAAGCAAGTGTGGACACACGGCAGAGTATAGACC 1329
||||||||||||||| ||||||| |||||| | ||| || ||||| |||||||||| |||
Sbjct 475 CCAATAAGATGACATATGCTACTGTCAAAGGAGGTG-GG-CACACTGCAGAGTATAAACC 532
Query 1330 AAACGAGACCTTTATCATGTTCCAAAGGTGGATCAGTGGCCAACCCCTGTAACAAAAG-G 1388
| | |||| |||||||||||||||||| ||||| ||||||||||| |||||| ||||| |
Sbjct 533 AGAGGAGAGCTTTATCATGTTCCAAAGATGGATAAGTGGCCAACCTCTGTAATAAAAGAG 592
Query 1389 CTTATGACCTT 1399
| ||| ||||
Sbjct 593 ATGATGGCCTT 603
Score = 145 bits (78), Expect = 1e-33
Identities = 95/103 (92%), Gaps = 2/103 (2%)
Strand=Plus/Plus
Query 97 TTCTGCTTCTGCTTGTCTTGTA-TCATCATGTTGATTCTGCCTCTATCGTCAAGTTTCTT 155
|||||||||||||||||||| | ||||||| |||||| | ||| |||||||||||||||
Sbjct 49 TTCTGCTTCTGCTTGTCTTG-AGACATCATGCTGATTCCGGCTCCATCGTCAAGTTTCTT 107
Query 156 CCTGGTTTTGAAGGCCCTCTTCCTTTCGAACTTGAAACCGGGT 198
|||||||||||||||||||||||||||||||| ||||||||||
Sbjct 108 CCTGGTTTTGAAGGCCCTCTTCCTTTCGAACTAGAAACCGGGT 150
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61287204205
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5