BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G23170.1
Length=2118
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481188 jgi|Araly1|481188|fgenesh2_kg.4__248__AT2G23170.1 3003 0.0
Ahg490882 jgi|Araly1|490882|fgenesh2_kg.7__315__AT1G59500.1 1343 0.0
> Ahg481188 jgi|Araly1|481188|fgenesh2_kg.4__248__AT2G23170.1
Length=1901
Score = 3003 bits (1626), Expect = 0.0
Identities = 1817/1909 (95%), Gaps = 14/1909 (1%)
Strand=Plus/Plus
Query 21 ACAAAGTCTAATATTATCACTTACAA-ATACCATTTTAATCATGACCGTTGATTC-AGCT 78
|||||||||||||||||| ||||||| | ||||||||||||||||||||||| || | ||
Sbjct 1 ACAAAGTCTAATATTATCCCTTACAACAAACCATTTTAATCATGACCGTTGA-TCTACCT 59
Query 79 CTGCGATCTCCGATGATGC-ACTCACCGTCC-ACTAAGGACGTGAAGGCTCTAAGGTTCA 136
|||||||||||||||| | ||||||||||| | |||||||||||||||||| |||||||
Sbjct 60 CTGCGATCTCCGATGA-ACTACTCACCGTCCGA-TAAGGACGTGAAGGCTCTGAGGTTCA 117
Query 137 TTGAGGAGATGACACGTAACGTCGATTTCGTTCAGAAGAAAGTGATTAGAGAGATACTTA 196
|||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 118 TTGAGGAGATGATACGTAACGTCGATTTCGTTCAGAATAAAGTCATTAGAGAGATACTTC 177
Query 197 GTCGTAACTCGGACACTGAGTACCTGAAACGGTTTGGTCTCAAGGGATTCACTGACCGTA 256
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 178 GTCGCAACTCGGAGACTGAGTACCTGAAACGGTTTGGTCTCAAGGGATTCACTGACCGGA 237
Query 257 AAACATTTAAGACCAAAGTTCCGGTGGTTATCTACGATGATCTTAAACCGGAGATTCAAC 316
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 238 AAGCATTTAAGACCAAAGTTCCGGTGGTTACCTACGATGATCTTAAACCGGAGATTCAAC 297
Query 317 GTATTGCCAATGGTGACCGGTCAATGATCTTGTCTTCTTACCCCATCACAGAGTTCCTCA 376
|||| ||||||||||||||||| ||||||||||| || |||||||||| ||||||||||
Sbjct 298 GTATAGCCAATGGTGACCGGTCTATGATCTTGTCATCACACCCCATCACCGAGTTCCTCA 357
Query 377 CAAGCTCTGGGACATCAGCTGGTGAAAGGAAGTTGATGCCAACCATTGATGAAGACATGG 436
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 358 CAAGCTCTGGGACATCAGCTGGTGAAAGGAAGTTGATGCCCACCATTGAAGAAGACATGG 417
Query 437 ACCGACGTCAGCTTTTATACAGTCTTCTCATGCCTGTGATGAATCTCTACGTGCCCGGAT 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 ACCGACGTCAGCTTTTATACAGTCTTCTCATGCCTGTGATGAATCTCTACGTGCCCGGAT 477
Query 497 TAGACAAAGGCAAGGCTCTATATTTTTTGTTCGTGAAGACGGAATCGAAGACTCCCGGTG 556
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 478 TAGACAAAGGCAAGGCTCTATATTTTTTGTTCGTGAAGACGGAATCGAAGACACCCGGTG 537
Query 557 GATTACCAGCACGTCCGGTGCTCACGAGTTATTACAAAAGCGAACAATTCAAGAGACGTC 616
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 538 GATTACCGGCACGTCCGGTTCTCACGAGTTATTACAAAAGCGAACAATTCAAGAGACGTC 597
Query 617 CTAACGATCCGTACAACGTGTACACGAGCCCTAACGAAGCCATCCTTTGTCCAGACTCAT 676
|| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
Sbjct 598 CTTACGATCCGTACAACGTGTACACGAGCCCTAACGAAGCCATTCTTTGTCCCGACTCGT 657
Query 677 CCCAAAGCATGTACACGCAGATGCTTTGTGGTCTCCTTATGCGTCACGAAGTCCTCCGTC 736
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 CCCAAAGCATGTACACTCAGATGCTTTGTGGTCTCCTTATGCGTCACGAAGTCCTCCGTC 717
Query 737 TCGGCGCCGTCTTCGCTTCTGGTCTCCTCCGTGCCATTGGATTCCTTCAAACCAATTGGA 796
|||| |||||||||||||| ||||||||||| ||||| || |||||||||||||||||||
Sbjct 718 TCGGTGCCGTCTTCGCTTCCGGTCTCCTCCGAGCCATAGGGTTCCTTCAAACCAATTGGA 777
Query 797 AAGAACTCGCCGACGATATCTCCACCGGTACCTTAAGTTCAAGAATCTCTGACCCGGCCA 856
||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct 778 AAGAACTCGCCAACGATATCTCCACCGGTACCCTAAGTTCAAGAATCTCTGATCCGGCTA 837
Query 857 TTAAAGAGAGCATGTCCAAGATCTTGACCAAACCGGACCAAGAACTGGCTGATTTCATAA 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 TTAAAGAGAGCATGTCCAAGATCTTGACCAAACCGGACCAAGAACTGGCTGATTTCATAA 897
Query 917 CTTCGGTATGTGGTCAAGACAATAGTTGGGAAGGTATTATTACTAAGATTTGGCCTAACA 976
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 898 CTTCGGTATGTGGTCAAGACAATAATTGGGAAGGTATTATTACTAAGATTTGGCCTAACA 957
Query 977 CTAAGTACCTTGACGTCATCGTTACTGGAGCCATGGCTCAGTATATCCCGATGCTTGAGT 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 CTAAGTACCTTGACGTCATCGTTACTGGAGCCATGGCTCAGTATATCCCGATGCTTGAGT 1017
Query 1037 ACTATAGCGGCGGGTTACCGATGGCTTGCACGATGTATGCATCGTCCGAGAGTTACTTTG 1096
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1018 ACTATAGCGGCGGGTTACCGATGGCTTGCACGATGTATGCATCCTCCGAGAGTTACTTTG 1077
Query 1097 GGATCAACTTGAAACCAATGTGTAAACCTTCTGAGGTTTCTTATACCATTATGCCAAACA 1156
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1078 GGATCAACTTGAAACCAATGTGTAAACCTTCTGAGGTTTCTTACACCATTATGCCAAACA 1137
Query 1157 TGGCATACTTCGAGTTTCTCCCTCATCATGAAGTCCCAACCGAAAAATCCGAACTTGTGG 1216
|||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| |
Sbjct 1138 TGGCCTACTTCGAGTTTCTCCCTCAT---GAAGTCCCAACCGGAAAATCCGAACTTGTAG 1194
Query 1217 AGCTAGCTGATGTCGAGGTCGGGAAAGAGTACGAGCTTGTGATCACAACCTATGCTGGGC 1276
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1195 AGCTAGCTGATGTCGAGGTTGGGAAAGAGTACGAGCTTGTGATCACAACCTATGCAGGGC 1254
Query 1277 TTAACCGTTATAGAGTTGGTGATATTCTTCAGGTGACTGGATTCTACAATTCCGCTCCAC 1336
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1255 TTAACCGTTATAGAGTTGGTGATATTCTTCAAGTGACTGGATTCTACAATTCCGCTCCAC 1314
Query 1337 AGTTCAAGTTTGTGCGGAGGAAGAACGTTTTGCTTAGCATTGAGTCGGATAAAACCGATG 1396
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1315 AGTTCAAGTTTGTGCGGAGGAAAAACGTTTTGCTTAGCATTGAGTCGGATAAAACCGATG 1374
Query 1397 AAGCTGAGCTCCAAA-GCGCGGTTGAGAACGCATCGCTCTTACTTGGAGAGCAAGGAACT 1455
||||||||||||||| | ||||||||||| |||||| | ||||||||||||||||||| |
Sbjct 1375 AAGCTGAGCTCCAAAAG-GCGGTTGAGAATGCATCGGTGTTACTTGGAGAGCAAGGAAAT 1433
Query 1456 CGTGTTATCGAGTACACGAGCTATGCAGAGACGAAGACTATACCTGGCCATTATGTCATT 1515
|| || ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1434 CGCGTGATCGAGTACACAAGCTACGCAGAGACAAAGACTATACCTGGCCATTATGTCATC 1493
Query 1516 TACTGGGAGCTTCTAGTGAAGGATCAAACCAATCCTCCAAATGACGAAGTCATGGCTCGG 1575
||||||||| |||| |||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1494 TACTGGGAGTTTCTGGTGAAGGATCAAACCAATCCACCAAATGACGAGGTCATGGCTCGG 1553
Query 1576 TGCTGCTTGGAAATGGAGGAGTCGTTGAACTCTGTGTATAGACAAAGTCGGGTTGCGGAT 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 TGCTGCTTGGAAATGGAGGAGTCGTTGAACTCTGTGTATAGACAAAGTCGGGTTGCGGAT 1613
Query 1636 AAGTCGATAGGACCACTCGAGATACGTGTTGTGAAGAATGGAACGTTCGAGGAGCTCATG 1695
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1614 AAGTCGATAGGGCCACTCGAGATACGTGTGGTGAAGAATGGAACGTTCGAGGAGCTCATG 1673
Query 1696 GACTATGCCATCTCCAGAGGCGCATCGATCAATCAGTACAAGGTGCCGAGGTGTGTGAGT 1755
|||||||||||||| ||||| || |||||||| ||||||||||||||| |||||||||||
Sbjct 1674 GACTATGCCATCTCGAGAGGAGCCTCGATCAACCAGTACAAGGTGCCGCGGTGTGTGAGT 1733
Query 1756 TTCACGCCAATAATGGAGCTTCTTGACTCAAGGGTTGTATCTACACACTTCAGCCCAGCT 1815
|||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 1734 TTCACGCCAATAGTGGAGCTGCTTGACTCAAGGGTTGTATCTACACACTTCAGTCCAGCT 1793
Query 1816 TTGCCACATTGGTCACCAGAACGTCGTCGTTGAGAAGATTTTGGTTTGTGTT-AGGATTT 1874
||||||||||||||||||||||| ||| ||||||||||||||| |||| ||| ||| |||
Sbjct 1794 TTGCCACATTGGTCACCAGAACGCCGTTGTTGAGAAGATTTTGTTTTG-GTTTAGGGTTT 1852
Query 1875 GTGAGTCGTACAATAAGTTCGGTGTACGGATGTTTACCCCATCAATGTT 1923
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1853 GTGAGTCGTACAATAAGTTCGGTGTACGGATGTTTACCCGATCAATGTT 1901
> Ahg490882 jgi|Araly1|490882|fgenesh2_kg.7__315__AT1G59500.1
Length=1812
Score = 1343 bits (727), Expect = 0.0
Identities = 1487/1844 (81%), Gaps = 92/1844 (5%)
Strand=Plus/Plus
Query 61 ATGACCGTTGATTCAG-CTCTGCGATCTCCGAT-GATGCACTC-ACCGTCCACT---AAG 114
||| |||||||||| | |||| | ||||| ||| | | ||| | | || || || ||
Sbjct 1 ATGGCCGTTGATTC-GCCTCTTCAATCTCGGATGGTTTCAC-CGA-CGACCTCTGAGAAA 57
Query 115 GACGTGAAGGCTCT-AAGGTTCATTGAGGAGATGACACGTAA-CGTCGATTTC-GTTC-A 170
|| ||||||||||| || |||||||||||||||||| || || | | || || |||| |
Sbjct 58 GATGTGAAGGCTCTCAA-GTTCATTGAGGAGATGACTCGGAACCCT-GA-CTCGGTTCAA 114
Query 171 GAAGAAAGTGATTAGAGAGATACTTAGTCGTAACTCGGACACTGAGTACCTGAAACGGTT 230
||| || || || |||||||||| |||||||||||| |||| || || |||||||||||
Sbjct 115 GAA-AAGGTTCTTGGAGAGATACTAAGTCGTAACTCGAACACCGAATATCTGAAACGGTT 173
Query 231 TGGTCTCAA-GGGATTCACTGACCGTAAAACATTTAAGACCAAAGTTCCGGTGGTTATC- 288
| | |||| ||| || ||| || || || || |||| ||||||||||||||||| |
Sbjct 174 CGATATCAATGGG-GCCATTGATCGGAATACGTTCAAGAACAAAGTTCCGGTGGTTA-CT 231
Query 289 TACGATGATCTTAAA-CCGGAGATTCAACGTAT-TGCCAATGGTGACCGGTCAATGATCT 346
||||| ||| ||||| ||||||||||||||||| | |||| ||||| || || |||||
Sbjct 232 TACGAAGAT-TTAAAGCCGGAGATTCAACGTATAT-CCAACGGTGATCGTTCTCCGATCT 289
Query 347 TGTCTTCTTACCCCATCACAGAGTTCCTCACAAGCTCTGGGACATCAGCTGGTGAAAGGA 406
|||| ||| |||||||||| ||||| |||||||||||||| ||||| |||||||| ||||
Sbjct 290 TGTCCTCTCACCCCATCACCGAGTTTCTCACAAGCTCTGGAACATCTGCTGGTGAGAGGA 349
Query 407 AGTTGATGCCAACCATTGATGAAGACATGGACCGACGTCAGCTTTTATACAGTCTTCTCA 466
| || ||||| || ||||| |||||| | |||||||||||||||||||||||||||||||
Sbjct 350 AATTAATGCCGACAATTGAAGAAGACTTAGACCGACGTCAGCTTTTATACAGTCTTCTCA 409
Query 467 TGCCTGTGATGAATCTCTACGTGCCCGGATTAGACAAAGGCAA-GGCTCTATATTTTTTG 525
|||||||||||||||| |||||||| ||||||||||||||||| |||| |||| || ||
Sbjct 410 TGCCTGTGATGAATCTGTACGTGCCGGGATTAGACAAAGGCAAAGGCT-TATACTTCTTA 468
Query 526 TTCGTGAAGACGGAATCGAAGAC-TCCCGGTGGATTACCAGCACGTCCGGTGCTCACGAG 584
|| |||||| |||| || ||||| || ||||| ||||| || ||||| || ||||||||
Sbjct 469 TTTGTGAAGTCGGAGTCTAAGACGTCA-GGTGGGTTACCGGCTCGTCCAGTTCTCACGAG 527
Query 585 TTATTACAAAAGCGAACAATTCAAGAGACGTCC-TAACGATCCGTACAACGTGTACACGA 643
||| ||||||||||| || |||| ||| || || || ||||||||||||||| ||||| |
Sbjct 528 TTACTACAAAAGCGACCACTTCAGGAGGCGACCGTA-CGATCCGTACAACGTCTACACTA 586
Query 644 GCCCTAACGAAGCCATCCTTTG-TCCAGACTCATCCCAAAGCATGTACACGCAGATGCTT 702
| ||||||||||||||||| || ||| ||||| || ||||||||||| | || |||||
Sbjct 587 GTCCTAACGAAGCCATCCTCTGCTCC-GACTCTTCTCAAAGCATGTATGCTCAAATGCTA 645
Query 703 TGTGGTCTCCTTA-TGCGTCACGAAGTCCTCCGTCTCGGCGCCGTCTTCGCTTCTGGTCT 761
|||||||| ||| |||| || ||||| ||||| || |||||||| || ||||| |||||
Sbjct 646 TGTGGTCTA-TTAATGCGCCATGAAGTTCTCCGACTAGGCGCCGTGTTTGCTTCAGGTCT 704
Query 762 CCTCCGTGCCATTG-GATTCCTTCA-AACCAATTGGAAAGAACTCGC-CGACGATATCTC 818
|||||||||| || | || || || ||| |||||||| ||||| || ||| ||||||||
Sbjct 705 CCTCCGTGCC-TTAAGCTTTCTCCAGAAC-AATTGGAAGGAACTTGCTCGA-GATATCTC 761
Query 819 CACCGGTACCTTAAGTTCAAGAATCT-CTGACCCGGCCATTAAAGAGAGCATGTCCAAGA 877
|| || ||| ||||||| ||||||| | || || | |||||| | ||||||| ||||
Sbjct 762 AACGGGAACCCTAAGTTCTAGAATCTTC-GATCCTACGATTAAAAACCGCATGTCAAAGA 820
Query 878 TCTTGACCAAACCGGACCAAGAACTGGCTGA-TTTCATAACTTCGGTATGTGGTCAAGAC 936
| |||| |||||| || |||||||| ||||| ||| | | || ||| | || || | |
Sbjct 821 TTTTGATCAAACCTGATCAAGAACTTGCTGAGTTTT-TGA-TT-GGTGTTTGTTC--G-C 874
Query 937 AATAG--TTGGGAAGGTATTATTACTAAGATTTGGCCTAACACTAAGTACCTTGACGTCA 994
|| || ||||||||| || || || ||||| ||||||||||| ||||||||||| || |
Sbjct 875 AAGAGAGTTGGGAAGGGATAATCACAAAGATATGGCCTAACACGAAGTACCTTGATGTGA 934
Query 995 TCGTTACTGGAGCCATGGCTCAGTATATCCCGATGCTTG-AGTACTATAGCGGCGGGTTA 1053
| |||||||| || ||||||||||||||||||| | ||| |||||||||||||||| |||
Sbjct 935 TTGTTACTGGTGCGATGGCTCAGTATATCCCGACG-TTGGAGTACTATAGCGGCGGATTA 993
Query 1054 CCGATGGCTTGCACGATGTATGCATCGTCCGAGAGTTACTTTGGGATCAACTTGAAA-CC 1112
|||||||||||||| |||||||| |||||||| |||||||| ||||| ||| | ||| ||
Sbjct 994 CCGATGGCTTGCACAATGTATGCTTCGTCCGAAAGTTACTTCGGGATTAACCT-AAAGCC 1052
Query 1113 AATGTGTAAACCTTCTGAGGTTTCTTATACCATTATGCCAAACATGGCATACTTCGAGTT 1172
||||||||||| || ||||||||||| || || ||||| |||||||| |||||||| ||
Sbjct 1053 GATGTGTAAACCCTCAGAGGTTTCTTACACAATCATGCCCAACATGGCCTACTTCGAATT 1112
Query 1173 TCTCCCTCATCAT---GA---AG-TCC--CAACCGAAAAATC------CGAA-C-T---T 1212
|||||| ||| || || || | |||| ||| ||| |||| | | |
Sbjct 1113 TCTCCCACATAATCACGATGGAGATGGAGCAACAGAAGCATCATTAGACGAAACCTCACT 1172
Query 1213 -GTGGAGCTAGCTGATGTCGAGGTCGGGAAAGAGTACGAGCTTGTGATCACAACCTATGC 1271
|| |||||||||||||| |||||||| |||||||| || || |||||||||||||| ||
Sbjct 1173 TGTAGAGCTAGCTGATGTTGAGGTCGGAAAAGAGTATGAACTCGTGATCACAACCTACGC 1232
Query 1272 TGGGCT-TAACCGTTATAGAGTTGGTGATATTCTTCAG-GTGACTGGATTCTACAATTCC 1329
||||| || |||||| |||||||| || ||||| | | || || || ||| | ||||||
Sbjct 1233 GGGGCTCTA-CCGTTACAGAGTTGGCGACATTCTCC-GTGTCACGGGGTTCCATAATTCC 1290
Query 1330 GCTCCACAGTTCAAGTTTGTGCGGAGGAAGAACGTTTTGCTTA-GCATTGAGTCGGATAA 1388
|||||||||||||| || | || || ||||| |||||| ||| |||| || || |||||
Sbjct 1291 GCTCCACAGTTCAAATTCATACGAAGAAAGAATGTTTTG-TTAAGCATCGAATCCGATAA 1349
Query 1389 AACCGATGAAGCTGAGCTCCAAA-GCGCGGTTGAGAACGCATCGCTCTTACTTGGAGAGC 1447
|||||| || |||||||| |||| | || || ||||| || |||| || ||| |||||
Sbjct 1350 AACCGACGAGGCTGAGCTACAAAAG-GCAGTGGAGAATGCGTCGCGGTTGTTTGCAGAGC 1408
Query 1448 AAGGAACTCGTGTTATCGAGTACACGAGCTATGCAGAGACGAAGACTATACCTGGCCATT 1507
||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| || ||||
Sbjct 1409 AAGGAACACGTGTGATCGAGTACACGAGCTACGCAGAAACGAAGACTATACCGGGTCATT 1468
Query 1508 ATGTCATTTACTGGGAGCTTCTAGTGAAG-GATCAAACCAAT-C-CT-CCAAATGACGAA 1563
| || || ||||||||||| || | | || || |||| |||| | || || | || |||
Sbjct 1469 ACGTAATCTACTGGGAGCTACTTG-GTAGAGACCAAAGCAATGCTCTTCCTAGCGAAGAA 1527
Query 1564 GTCATGGCTCGGTGCTGCTTGGAAATGGAGGAGTCGTTGAACTCTGTGTATAGACAAAGT 1623
||||||||| |||||| ||||| |||||||| || | ||||| || |||||||||||
Sbjct 1528 GTCATGGCTAAGTGCTGTTTGGAGATGGAGGAATCCCTAAACTCGGTTTATAGACAAAGC 1587
Query 1624 CGGGTTGCGGATAAGTCGATAGGACCACTCGAGATACGTGTTGTG-AAGAATGGAACGTT 1682
||||| || ||||| ||||| || ||| | ||||||||||| ||| || || || |||||
Sbjct 1588 CGGGTCGCTGATAAATCGATCGGTCCATTGGAGATACGTGTAGTGCAA-AACGGTACGTT 1646
Query 1683 CGAGGAGCTCATGGACTATGCCATCTCCAGAGGCGCATCGATCAATCAGTACAAGGTGCC 1742
|||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||| ||
Sbjct 1647 TGAGGAGCTTATGGACTATGCCATCTCGAGAGGCGCATCGATTAATCAGTATAAGGTCCC 1706
Query 1743 GAGGTGTGTGAGTTTCACGCCAATAATGGAGCTTCTTGACTCAAGGGTTGTATCTACACA 1802
|||||| ||||| ||||| || || ||||| || |||||||| || ||||| ||| | ||
Sbjct 1707 GAGGTGCGTGAGCTTCACACCGATCATGGAACTGCTTGACTCTAGAGTTGTGTCTGCTCA 1766
Query 1803 CTTCAGCCCAGCTTTGCCACATTGGTCACCAGAACGTCGTCGTT 1846
|||||||| | ||||| || |||||||||||||| |||||||
Sbjct 1767 TTTCAGCCCTTCATTGCCGCACTGGTCACCAGAACGACGTCGTT 1810
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79684792540
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5