BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G23220.1 Length=1548 Score E Sequences producing significant alignments: (Bits) Value Ahg899631 jgi|Araly1|899631|Al_scaffold_0004_281 2346 0.0 Ahg932315 jgi|Araly1|932315|scaffold_400303.1 2039 0.0 Ahg899629 jgi|Araly1|899629|Al_scaffold_0004_279 1893 0.0 > Ahg899631 jgi|Araly1|899631|Al_scaffold_0004_281 Length=1545 Score = 2346 bits (1270), Expect = 0.0 Identities = 1459/1551 (94%), Gaps = 9/1551 (1%) Strand=Plus/Plus Query 1 ATGCATGTTTCAATTCAACACATTTACAAATTCTTAGATCTAAATATGGAAACCT-ATTT 59 |||||||||||| |||||||||||||||| ||||||||||| | ||||| | || |||| Sbjct 1 ATGCATGTTTCAGTTCAACACATTTACAAGTTCTTAGATCT--A-ATGGAGA-CTCATTT 56 Query 60 CCTACTTTTATCTCTCGCCTTCTTCCTTTTCATTTCTGTTAAACTTTTGTTTGGTAAACG 119 |||| ||||||||||| |||||| ||||||||||| |||||||||||||||||||||| Sbjct 57 CCTAATTTTATCTCTCATCTTCTTTGTTTTCATTTCTCTTAAACTTTTGTTTGGTAAACG 116 Query 120 GCTTAGCAAGTTTAACCTACCACCAAGTCCGGCTAGGCCCCTGCCGTTGATTGGACACCT 179 || ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 117 GCATAGCAAGTTTAACCTACCACCAAGTCCGGCTTGGCCCTTGCCGTTGATTGGACACCT 176 Query 180 TCACCTCCTGAAACTCCCGCTTCACCGCACATTCCTCTCTTTCTCTCAATCCTTAGGTGG 239 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 177 TCACCTCCTGAAGCTCCCGCTTCACCGCACATTCCTCTCTTTCTCTCAATCCTTAGGTGA 236 Query 240 CGCCCCAATTTTCTGCCTCCGCCTCGGAAACCGTCTCACGGTTGTAGTCTCTTCATACTC 299 |||||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 237 CGCCCCAATTTTCTCCCTCCGCCTCGGAAACCGTCTCACGGTTGTCGTCTCATCCTACTC 296 Query 300 CATCGCTGAAGAATGTTTTACAAAAAACGACATTGTTTTCGCCAATAGGCCAGAGTTAAT 359 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 297 CATCGCTGAAGAATGCTTTACAAAAAACGACATTGTTTTCGCCAATAGGCCAGAGTTGAT 356 Query 360 TCTCGGGAAACATATTGAGTACAACTCCACCACTATGACTAGTGCGCCTTATGGTGACCA 419 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 357 TCTCGGGAAACATATTGAGTACAACTCCACCACTATGACTAGTGCGCCTTACGGTGACCA 416 Query 420 CTGGCGAAACTTGCGCCGCATTGCTACCCTGGAGATCTTCGCATCACATAAGCTCAACGG 479 |||||||||||||||||| || || ||| ||||||||||||| ||||||||||| ||||| Sbjct 417 CTGGCGAAACTTGCGCCGTATCGCCACCTTGGAGATCTTCGCGTCACATAAGCTTAACGG 476 Query 480 CTTCTTATCTGTCCGTAAGGATGAGATCCGTCAGTTGCTACTACGTCTCTCCAAAAACTC 539 |||||||| ||||||||||||||||||||| || ||| |||||||||||||||||||||| Sbjct 477 CTTCTTATATGTCCGTAAGGATGAGATCCGACACTTGTTACTACGTCTCTCCAAAAACTC 536 Query 540 GAGACATGGGTTTGCGAAGGTGGAGATGAGACATTTGCTTTTTGAGTTGACTATCAATAA 599 | |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 537 GCGACATGAGTTTGCGAAAGTGGAGATGAGACATTTGCTTTTTGAGTTGACTATCAACAA 596 Query 600 CGTTTTTAGAATGGTAGCCGGGAAACGATTTTATGGTGAGGGCACAGAGCAAGACGAAGT 659 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 597 CGTTTTTAGAATGGTAGCGGGGAAACGATTTTATGGTGAGGGCACAGAGCAAGACGAAGT 656 Query 660 TGCGCAGCAAGTGAGACATCTGATGGACGAGATTGTGACCAGCGCTGGCGCCGGGAATGC 719 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 657 TGCGCAGCAAGTGAGACAGCTGATGGACGAGATTGTAACCAGCGCTGGCGCCGGGAATGC 716 Query 720 AGCCGACTATTTACCAATCATGCGTTGGTTCACAAATTTTGAGAAACGCGTCAAGAATTT 779 |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| || Sbjct 717 AGCCGACTATTTACCAATCATGCGTTGGATCACAGATTTTGAGAAACGCGTCAAGAAGTT 776 Query 780 AGCGATTCGTATCGATAAGTTTTTGCAGAGTCTTGTGGATGAGAAACGTGCGGATAAAGA 839 ||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 777 AGCGATTCGGATCGATAAGTTTTTGCAGAGTCTAGTGGATGAGAAACGTGCTGATAAAGA 836 Query 840 AAAGGGTACCACTATGATAGATCACTTGCTTTCTCTCCAAG-AATCTCAGCCTGATTACT 898 |||||||||||| |||||||||||||||||||||||||||| || ||||||||||||| | Sbjct 837 AAAGGGTACCACAATGATAGATCACTTGCTTTCTCTCCAAGCAA-CTCAGCCTGATTATT 895 Query 899 ATACAGATGTCACTCTTAAAGGAATTATAATTGTAATGATAATTGCTGGATCTGAAACAA 958 |||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||||||| Sbjct 896 ATACAGATGTCATTCTTAAAGGACTCATAGTTGTTATGATAATTGCTGGATCTGAAACAA 955 Query 959 TAGCATGGACTTTAGAATGGGCGATGCTGAATGTGTTGAACCATCCAGAAGTATTAAAGA 1018 | |||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| Sbjct 956 TTGCATGGACTTTAGAATGGGCGATGTTGAATTTGTTGAACCATCCAGAAGTGTTAAAGA 1015 Query 1019 AAGCTAGGACCGAAATCGATACGAAAATCGGTTTTGACCGGTTAATGGATGAAGCTGATA 1078 ||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||| Sbjct 1016 AAGCTAGGACCGAAATCGATACGAAAATCGGTTTTGACCGGTTGATTGATGAAGCGGATA 1075 Query 1079 CTAAAAATCTGCCTTATCTCCAATGGATTGTGTTGGAGACCTTACGTCTTCACCCGGCAG 1138 |||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct 1076 CTAAAAATCTCCCTTATCTCCAATGGATAGTGTTGGAGACCCTACGTCTTCACCCGGCAG 1135 Query 1139 CTCCAACAAATGTTCCACATAGT-ACGTCAGAGGATTGCATGTTGGCAGGATATGATGTT 1197 ||||||||||||||||||||| | ||||||||||||||||||||||||||||| || || Sbjct 1136 CTCCAACAAATGTTCCACATA-TGACGTCAGAGGATTGCATGTTGGCAGGATACGACATT 1194 Query 1198 CCACGTGGTTCGATGTTATTGGTGAACATATGGTCCATGCATAGAGACCCGTCTATATGG 1257 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1195 CCACGTGGATCGATGTTATTGGTGAACATATGGGCCATGCATAGAGACCCGTCTATATGG 1254 Query 1258 GAAGACCCAGAAATGTTCAAGCCAGAGAGGTTCAAAAATGAAAAGCTAAATCAAAAGTTG 1317 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 1255 GAAGACCCAGAAATGTTCAAGCCAGAGAGGTTCAAAAATGAAAAGCTTAATCATAAGTTG 1314 Query 1318 TTGTCGTTTGGGATGGGACGACGAGCCTGTCCCGGGTATGGCCTAGCTCATCGGGTAGTG 1377 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1315 TTGTCGTTTGGGATTGGACGACGAGCCTGTCCCGGGAATGGCCTAGCTCATCGGGTAGTG 1374 Query 1378 AGCTTGACTCTTGGATCGATGGTTCAGTGTTTCGAATGGCAGAGAATTGGACAAGAATAT 1437 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1375 AGCTTGGCTCTTGGATCGATGGTTCAGTGTTTCGAATGGCAGAGAATTGGAGAAGAATAT 1434 Query 1438 GTTGACAATAGTGAAGACAAAACTGTGGTCTTGATGCGTCCTACGACACCGTTGCTAGCC 1497 |||||||||| ||||| ||||||| ||||||||||||||| |||||||||| ||||| Sbjct 1435 GTTGACAATAAAGAAGATGAAACTGTTGTCTTGATGCGTCCTGTGACACCGTTGTTAGCC 1494 Query 1498 ATGTGTAAAGCTCGTCCCATTGTCCATGAGATTCTTGATGCTTTTGCTTGA 1548 ||||||||||||||||||||||||||| |||||| ||||||||||| |||| Sbjct 1495 ATGTGTAAAGCTCGTCCCATTGTCCATAAGATTCGTGATGCTTTTGATTGA 1545 > Ahg932315 jgi|Araly1|932315|scaffold_400303.1 Length=1534 Score = 2039 bits (1104), Expect = 0.0 Identities = 1375/1505 (91%), Gaps = 22/1505 (1%) Strand=Plus/Plus Query 24 TTACAAATTCTTAGATCTAAATATGGAAACCTATTTCCTACTTTTATCTCTCGCCTTCTT 83 |||| | |||| |||||| | ||||| ||| |||||||| || ||||||||| |||||| Sbjct 2 TTACGAGTTCTAAGATCT--A-ATGGAGACCCATTTCCTAATTCTATCTCTCGTCTTCTT 58 Query 84 CCTTTTCATTTCTGTTAAACTTTTGTTTGGTAAACGGCTTAGCAAGTTTAACCTACCACC 143 | ||| ||||||| ||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct 59 CGTTTGCATTTCTCTTACACTTTTTTTTGGTAAACGGCAAAGCAAGTTTAACCTACCACC 118 Query 144 AAGTCCGGCTAGGCCCCTGCCGTTGATTGGACACCTTCACCTCCTGAA-ACTCCCGCTTC 202 |||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| Sbjct 119 AAGTCCGGCTAGGCCCCTGCCGTTGATTGGACACCTTCACCTCCTGAAGA-TGCCGCTTC 177 Query 203 ACCGCACATTCCTCTCTTTCTCTCAATCCTTAGGTGGCGCCCCAATTTTCTGCCTCCGCC 262 ||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||| Sbjct 178 ACCGCACATTCCTCTCTTTCTCTCAATCCCTAGGTGACGCTCCAATTTTCTGCCTCCGCC 237 Query 263 TCGGAAACCGTCTCACGGTTGTAGTCTCTTCATACTCCATCGCTGAAGAATGTTTTACAA 322 ||||||||||||||| |||| | |||||||| |||||||||||||||||||| ||||||| Sbjct 238 TCGGAAACCGTCTCATGGTTATTGTCTCTTCCTACTCCATCGCTGAAGAATGCTTTACAA 297 Query 323 AAAACGACATTGTTTTCGCCAATAGGCCAGAGTTAATTCTCGGGAAACATATTGAGTACA 382 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 298 AAAACGACATTGTTTTAGCCAATAGGCCAGAGTTCATTGTCGGGAAACATATTGAGTACA 357 Query 383 ACTCCACCACTATGACTAGTGCGCCTTATGGTGACCACTGGCGAAACTTGCGCCGCAT-T 441 |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| | Sbjct 358 ACTCCACCACTATGACAAGTGCGCCTTATGGTGACCACTGGCGAAACCTGCGCCGCATCT 417 Query 442 GCTACCCTGGAGATCTTCGCATCACATAAGCTCAACGGCTTCTTATCTGTCCGTAAGGAT 501 || |||||||||||||| | ||||| | |||||| ||||| |||||||||||||||||| Sbjct 418 GC-ACCCTGGAGATCTTTTCGTCACACAGGCTCAATGGCTTTTTATCTGTCCGTAAGGAT 476 Query 502 GAGATCCGTCAGTTGCTACTACGTCTCTCCAAAAACTCGAGACATGGGTTTGCGAAGGTG 561 |||||||| || ||| ||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 477 GAGATCCGACACTTGTTACTACGTCTCTCCAAAAACTCGCGACATGGGTTTGCCAAGGTG 536 Query 562 GAGATGAGACATT-TGCTTTTTGAGTTGACTATCAATAACGTTTTTAGAATGGTAGCCGG 620 |||||| || | | || ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 537 GAGATGCGA-AGTCTGTTTTTTGAGTTGACTATCAATAACATTTTTAGAATGGTAGCCGG 595 Query 621 GAAACGATTTTATGGTGAGGGCACAGAGCAAGACGAAGTTGCGCAGCAAGTGAGACATCT 680 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 596 GAAGCGATTTTATGGTGAGGGCACAGAGCAAGACGAAGTTGCGCAGCAAGTGAGACAACT 655 Query 681 GATGGACGAGATTGTGACCAGCGCTGGCGCCGGGAATGCAGCCGACTATTTACCAATCAT 740 ||| ||||||||| || | ||||||||||| |||||||||||||| ||| |||||||| | Sbjct 656 GATTGACGAGATTATGTCTAGCGCTGGCGCAGGGAATGCAGCCGATTATATACCAATCTT 715 Query 741 GCGTTGGTTCACAAATTTTGAGAAACGCGTCAAGAATTTAGCGATTCGTATCGATAAGTT 800 ||||||| |||||||||||||||||| | ||||||| ||||||| ||| |||||||||| Sbjct 716 GCGTTGGATCACAAATTTTGAGAAACACATCAAGAAGTTAGCGAGTCGGCTCGATAAGTT 775 Query 801 TTTGCAGAGTCTTGTGGATGAGAAACGTGCGGATAAAGAAAAGGGTACCACTATGATAGA 860 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 776 TTTGCAGAGTCTGGTGGATGAGAAACGTGCGGAGAAAGAAAAGGGTACCACTATGATAGA 835 Query 861 TCACTTGCTTTCTCTCCAAGAATCTCAGCCTGATTACTATACAGATGTCACTCTTAAAGG 920 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 836 TCACTTGCTTTCTCTCCAAGAAACTCAGCCTGATTATTATACAGATGTCACTCTTAAAGG 895 Query 921 AATTATAATTGTAATGATAATT-GCTGGATCTGAAACAATAGCATGGACTTTAGAATGGG 979 ||| ||| |||| |||||| || |||||||||||||||||||| |||||||||||||||| Sbjct 896 AATAATACTTGTTATGATA-TTCGCTGGATCTGAAACAATAGCGTGGACTTTAGAATGGG 954 Query 980 CGATGCTGAATGTGTTGAACCATCCAGAAGTATTAAAGAAAGCTAGGACCGAAATCGATA 1039 ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct 955 CGATGTTGAATTTGTTGAACCATCCAGAAGTGTTAAAGAAAGCTAGGACCGAAATCAATA 1014 Query 1040 CGAAAATCGGTTTTGACCGGTTAATGGATGAAG-CTGATACTAAAAATCTGCCTTATCTC 1098 ||| ||||||||||||||||||||| ||||| | | ||||||| |||||| ||||||||| Sbjct 1015 CGATAATCGGTTTTGACCGGTTAATAGATGA-GTCGGATACTATAAATCTTCCTTATCTC 1073 Query 1099 CAATGGATTGTGTTGGAGACCTTACGTCTTCACCCGGCAGCTCCAACAAATGTTCCACAT 1158 ||||||||||||||||||||| |||||||| |||||| |||||| ||| || ||||||| Sbjct 1074 CAATGGATTGTGTTGGAGACCCTACGTCTTTACCCGGTAGCTCCTACACTTGATCCACAT 1133 Query 1159 A-GTACGTCAGAGGATTGCATGTTGGCAGGATATGATGTTCCACGTGGTTCGATGTTATT 1217 | | ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 1134 ATG-ACGTCAGAGGATTGCATGTTGGCAGGATACGACGTTCCACGTGGTTCGATGTTATT 1192 Query 1218 GGTGAACATATGGTCCATGCATAGAGACCCGTCTATATGGGAAGACCCAGAAATGTTCAA 1277 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1193 GGTGAACATATGGGCCATGCATAGAGACCCGTCTATATGGGAAGACCCCGAAATGTTCAA 1252 Query 1278 GCCAGAGAGGTTCAAAAATGAAAAGCTAAATCAAAAGTTGTTGTCGTTTGGGATGGGACG 1337 ||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 1253 GCCAGAGAGGTTCGTAAATGAAAAGCTTAATCAAAAGTTGTTGTCGTTTGGGATTGGACG 1312 Query 1338 ACGAGCCTGTCCCGGG-TATGGCCTAGCTCATCGGGTAGTGAGCTTGACTCTTGGATCGA 1396 |||||| ||||||||| | |||||||||||||||||||||||||||| |||||||||||| Sbjct 1313 ACGAGCTTGTCCCGGGGT-TGGCCTAGCTCATCGGGTAGTGAGCTTGGCTCTTGGATCGA 1371 Query 1397 TGGTTCAGTGTTTCGAATGGCAGAGAATTGGACAAGAATATGTTGACAATAGTGAAGACA 1456 ||||||||||||| || ||||||||||||||| ||||||||||||||| ||| ||||| | Sbjct 1372 TGGTTCAGTGTTTTGAGTGGCAGAGAATTGGAGAAGAATATGTTGACAGTAGAGAAGA-A 1430 Query 1457 AAACTGTGGTC-TTGATGCGTCCTACGACACCGTTGCTAGCCATGTGTAAAGCTCGTCCC 1515 | || || ||||||||| || |||||||||||||||| |||||||||||||| ||| Sbjct 1431 CC-CA-TG-TCCTTGATGCGTACTGCGACACCGTTGCTAGCTATGTGTAAAGCTCGACCC 1487 Query 1516 ATTGT 1520 ||||| Sbjct 1488 ATTGT 1492 > Ahg899629 jgi|Araly1|899629|Al_scaffold_0004_279 Length=1560 Score = 1893 bits (1025), Expect = 0.0 Identities = 1390/1562 (89%), Gaps = 42/1562 (3%) Strand=Plus/Plus Query 5 ATGTTTCAATTCAACACATTTACAAATTCTTAGATCTAAATATGGAAACCT-ATTTCCTA 63 ||||||||||||||||||||||||| ||||||||||| | ||||||| || |||||||| Sbjct 23 ATGTTTCAATTCAACACATTTACAAGTTCTTAGATCT--A-ATGGAAA-CTCATTTCCTA 78 Query 64 CTTTTATCTCTCGCCTTCTTCCTTTTCATTTCTGTTAAACTTTTGTTTGGTAAACGGCTT 123 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| | Sbjct 79 ATTTTATCTCTCGCCTTCTTCTTTTTCATTTCTCTTAAACTTTTGTTTGGTAAAAGGCAT 138 Query 124 AGCAAGTTTAACCTACCACCAAGTCCGGCTAGGCCCCTGCCGTTGATTGGACACCTTCAC 183 | |||||||||||||||||||||||| |||||||| || || || ||||||||||||||| Sbjct 139 AACAAGTTTAACCTACCACCAAGTCCAGCTAGGCCACTTCCATTTATTGGACACCTTCAC 198 Query 184 CTCCTGAAA-CTCCCGCTTCACCGCACATTCCTCTCTTTCTCTCAATCCTTAGGTGGCGC 242 ||||| ||| ||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 199 CTCCT-AAAGAAGCCGCTTCACCGTACATTCCTCTCTTTCTCTCAATCCCTAGGTGGCGC 257 Query 243 CCCAATTTTCTGCC-TCCGCCTCGGAAACCGTCTCACGGTTGTAGTCTCTTCATACTCCA 301 ||| ||||||| || |||||||||||||||||||||||||||| ||||| || ||||||| Sbjct 258 CCCGATTTTCT-CCATCCGCCTCGGAAACCGTCTCACGGTTGTTGTCTCCTCCTACTCCA 316 Query 302 TCGCTGAAGAATGTTTTACAAAAAACGACATTGTTTTCGCCAATAGGCCAGAGTTAATTC 361 ||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| |||| Sbjct 317 TCGCTGAAGAATGCTTTACAAAAAACGACATTGTTTTGGCCAATAGGCCAAAGTTCATTC 376 Query 362 TCGGGAAACATATTGAGTACAACTCCACCACTATGACTAGTGCGCCTTATGGTGACCACT 421 |||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| Sbjct 377 TCGGGAAACATATTGAGTACAACTTCACCACTATGACAAGTGCGCCTTATGGTGACTACT 436 Query 422 GGCGAAACTTGCGCCGCATTGCTACCCTGGAGATCTTCGCATCACATAAGCTCAACGGCT 481 |||||||| ||||||| || | |||||| ||||| || | ||||| |||||||| |||| Sbjct 437 GGCGAAACCTGCGCCGTATCGGTACCCTCGAGATATTTTCTTCACACAAGCTCAATGGCT 496 Query 482 TCTTATCTGTCCGTAAGGATGAGATCCGTCAGTTGCTACTACGT-CTCTCCAAAAACTCG 540 | |||||| ||||||||||||||||||| || ||| || | | | || || ||||||||| Sbjct 497 TTTTATCTATCCGTAAGGATGAGATCCGACACTTGTTATTGC-TCCTATCAAAAAACTCG 555 Query 541 -AGACATGGGTTTGCGAAGGTGGAGATGAGACATTTGCTTTT-TGAGTTGACTATCAATA 598 | |||||||||||||||||||||||||||||| ||| |||| ||| ||||||||||| | Sbjct 556 CA-ACATGGGTTTGCGAAGGTGGAGATGAGACAATTG-TTTTATGATTTGACTATCAACA 613 Query 599 ACGTTTTTAGAATGGTAGCCGGGAAACGATTTTATGGTGAGGGCACAGAGCAAGACGAAG 658 || || || ||||| ||||||||||||||| |||||| ||||| ||||||||||| || | Sbjct 614 ACATTCTTCGAATGATAGCCGGGAAACGATATTATGGAGAGGGAACAGAGCAAGATGACG 673 Query 659 TTGCGCAGCAAGTGAGACA-TCTGATGGACGAGATTG-TGACCAGCGCTGGCGCCGGGAA 716 |||||| || |||||| || | |||| |||||||||| | | ||| |||||||| ||||| Sbjct 674 TTGCGCGGCGAGTGAGCCAGT-TGATTGACGAGATTGTTTA-CAGGGCTGGCGCTGGGAA 731 Query 717 TGCAGCCGACTATTTACCAATCATGCGTTGG-TTCACAAATTTTGAGAAACGCGTCAAGA 775 ||||||||| |||||||| || |||||||| || ||| ||||||||||| | |||||| Sbjct 732 TGCAGCCGATTATTTACCGATTTTGCGTTGGATT-ACAGATTTTGAGAAAGGGGTCAAGG 790 Query 776 ATTTAGCGATTCGTA-TCGATAAGTTTTTGCAGAGTCTTGTGGATGAGAAACGTGCGGAT 834 | ||||||| ||| | | ||| |||||||||||||||| || ||||||||||||| |||| Sbjct 791 AGTTAGCGAGTCG-AGTTGATGAGTTTTTGCAGAGTCTGGTCGATGAGAAACGTGTGGAT 849 Query 835 AAAGAAAAGGGTACCACTATGATAGATCACTTGC-TTTCTCTCCAAGA-ATCTCAGCCTG 892 ||||||||||||| ||||||||| |||||||| | |||| |||||||| | ||||||||| Sbjct 850 AAAGAAAAGGGTAACACTATGATGGATCACTTACTTTTC-CTCCAAGAGA-CTCAGCCTG 907 Query 893 ATTACTATACAGATGTCACTCTTAAAGGAATTATAATTGTAATGATAATTGCTGG-ATCT 951 ||||||||||||||||||||||||||||||| |||||||| |||||| |||| || | || Sbjct 908 ATTACTATACAGATGTCACTCTTAAAGGAATCATAATTGTTATGATACTTGCCGGGA-CT 966 Query 952 GAAACAATAGCATGGA-CTTTAGAATGGGCGATGCTGAATGTGTTGAACCATCCAGAAGT 1010 |||||| ||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 967 GAAACATTAGCA-GGAACTTTAGAATGGGCGATGCTGAATTTGTTGAACCATCCAGAAGT 1025 Query 1011 ATTAAAGAAAGCTAGGACCGAAATCGATACGAAAATCGGTTTTGACCGGTTAATGGATGA 1070 | || ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 1026 ACTAGAGAAAGCGAGGACCGAAATCGATACCAAAATCGGTTTTGACCGGTTAATAGATGA 1085 Query 1071 AGCTGATACTAAAAATCTGCCTTATCTCCAATGGATTGTGTTGGAGACCTTACGTCTTCA 1130 ||| |||||||||||||| ||||||||||||||||| |||||||||||| |||||||||| Sbjct 1086 AGCCGATACTAAAAATCTCCCTTATCTCCAATGGATAGTGTTGGAGACCCTACGTCTTCA 1145 Query 1131 CCCGGCAGCTCCAACAAATGTTCCACATA-GTACGTCAGAGGATTGCATGTTGGCAGGAT 1189 || ||||||||||||||||||||||||| | |||||||| ||||| ||||||||||||| Sbjct 1146 TCCAGCAGCTCCAACAAATGTTCCACATATG-ACGTCAGATGATTGTATGTTGGCAGGAT 1204 Query 1190 ATGATGTTCCACGTGGTTCGATGTTATTGGTGAACATATGGTCCATGCATAGAGACCCGT 1249 | || |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1205 ACGACGTTCCACGTGGTTCGATGTTATTGGTGAACATATGGGCCATGCATAGAGACCCGT 1264 Query 1250 CTA-TATGGGAAGACCCAGAAATGTTCAAGCCAGAGAGGTTCAAAAATGAAAAGCTAAAT 1308 | | ||||||||||||| |||||||||||||||||||||||| ||||| ||||||| ||| Sbjct 1265 C-AGTATGGGAAGACCCCGAAATGTTCAAGCCAGAGAGGTTCGAAAATCAAAAGCTTAAT 1323 Query 1309 CAAAAGTTGTTGTCGTTTGGGATGGGACGACGAGCCTGTCCCGGG-TATGGCCTAGCTCA 1367 ||||||||||||||||||||||| |||||| |||| ||||| ||| | |||||||||||| Sbjct 1324 CAAAAGTTGTTGTCGTTTGGGATTGGACGAAGAGCTTGTCCTGGGGT-TGGCCTAGCTCA 1382 Query 1368 TCGGGTAGTGAGCTTGACTCTTGGATCGATGGTTCAGTGTTTCGAATGGCAGAGAATTGG 1427 |||| || |||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1383 TCGGTTACTGAGCTTGGCTCTTGGATCGATGGTTCAGTGTTTTGAATGGCAGAGAATTGG 1442 Query 1428 ACAAGAATATGTTGACAATAGTGAAGACAAAACTG-TGGTCTTGATGCGTCCTACGACAC 1486 | ||||||||||||||| || ||||| | || ||| | ||||||||||| |||||| Sbjct 1443 AGAAGAATATGTTGACACGAGAGAAGA-A---CTTATGGCCATGATGCGTCCTGCGACAC 1498 Query 1487 CGTTGCTAGCCATGTGTAAAGCTCGTCCCATTGTCCATGAGATTCTTGATGCTTTTGCTT 1546 | |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 1499 CATTGCTAGCCATGTGTAAAGCTCGTCCCATTGTCCATAAGATTCTTAATGCTTTTGCTT 1558 Query 1547 GA 1548 || Sbjct 1559 GA 1560 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57973352890 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5