BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G24370.1 Length=2367 Score E Sequences producing significant alignments: (Bits) Value Ahg481293 jgi|Araly1|481293|fgenesh2_kg.4__353__AT2G24370.1 3709 0.0 Ahg491618 jgi|Araly1|491618|fgenesh2_kg.7__1051__AT4G31230.1 1269 0.0 Ahg497409 jgi|Araly1|497409|fgenesh2_kg.365__1__AT5G61550.1 86.1 1e-15 Ahg496318 jgi|Araly1|496318|fgenesh2_kg.8__2134__AT5G61550.1 86.1 1e-15 > Ahg481293 jgi|Araly1|481293|fgenesh2_kg.4__353__AT2G24370.1 Length=2365 Score = 3709 bits (2008), Expect = 0.0 Identities = 2247/2366 (95%), Gaps = 2/2366 (0%) Strand=Plus/Plus Query 1 ATGTGGATGCCGAAAAACAATAACGTGGGAGTCAAGGAAGGAGGGTCTAGCGGAGTTGTA 60 |||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||| Sbjct 1 ATGTGGATGCCGAAAAACAATAACGTGGGAGTCAAGGAAGGAGGATCGAGCGGAATTGTA 60 Query 61 GCTGTTGCAATAGACAAAGACAAAAGCAGCCAACACGCTCTTAAATGGGCTGTTGATAAT 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 61 GCTGTTGCAATAGACAAAGACAAAAGCAGCCAACACGCTCTTAAATGGGCTGTTGATCAT 120 Query 121 TTGTTGCAGCGAGGCCAATCCGTCATTCTTGTCCACGTCAAGCTTCGACCTTCTCCATTG 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 121 TTGTTGCAGCGAGGCCAATCCGTCATTCTCGTCCACGTCAAGCTTCGACCTTCTCCATTG 180 Query 181 AATAATAGCGCTTCTCTTCATGCTTCCTCTGCAAAGCTGAGCCAAGATTCTTCATTGGTA 240 ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 181 AATAATAGCCCTTCTCTTCATGCTTCTTCTGCAAAGCTGAGCCAAGATTCTTCATTGGTA 240 Query 241 TGCAGAGATCCAGAAGGCATTTCCAAAGAAATATTTCTTCCTTTCCGTTGCTTCTGCACA 300 |||||||||||||||||||||||||| || |||| |||||||| |||||||||||||| Sbjct 241 TGCAGAGATCCAGAAGGCATTTCCAAGGAGTTATTCCTTCCTTTTCGTTGCTTCTGCACC 300 Query 301 CGCAAAGACATTCAATGCCAAGATGTGTTGCTTGAGGAGTCCGATGTTGCCAAAGCATTG 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 301 CGCAAAGATATTCAATGCCAAGATGTGTTGCTTGAGGAGTCCGATGTTGCCAAAGCGTTG 360 Query 361 GTCGAATACGTAAACCAAGCGGCCATTGAGGTTTTAGTAGTTGGTTCCTCCAGCAAAGGT 420 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 361 GTCGAATACGTAAACCAAGCCGCCATTGAGGTTTTAGTAGTTGGTTCCTCTAGCAAAGGT 420 Query 421 GGTTTTCTCAGGTTCAACAAACCTACAGATATTCCAGGCAGCATAACAAAAAACGCTCCT 480 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| Sbjct 421 GGTTTTCTCAGGTTCAACAAGCCTACAGATATTCCAGGCAACATAACAAAAAACGCGCCT 480 Query 481 GATTTCTGCACGGTTTATATCATTTCCAAAGGAAAGATTCAAACAATGAGATCAGCTTCT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 GATTTCTGCACGGTTTATATCATTTCCAAAGGAAAGATTCAAACAATGAGATCAGCTTCT 540 Query 541 CGTTCTGCACCCATGACTGCTCCTCTACGCAGTTCAGTTCAACCACCTAGCTTAAAGCCT 600 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct 541 CGTTCTGCACCCATGACTGCTCCTCTACGCAGTCCGGTTCAACCACCTAGCTTAAAGCCT 600 Query 601 CCTCAACCTATGCCTTCTACTTCCGCTAACAGTCTGCGAGCCGATAGACGGTCTTTTGAG 660 |||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| Sbjct 601 CCTCAACCTATGCCTTCTACTTTCGCTAACAGTATGCGAGCCGCTAGACGGTCTTTTGAG 660 Query 661 TCTAACCAACGAAGGTCTGTAGAAGATCAACAACGCAGGTCTATGGAGGATCAACAACGC 720 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 661 TCTAACCAACGAAGGTCTGTCGAAGATCAACAACGTAGGTCTATGGAGGATCAACAACGG 720 Query 721 AGGTCAATAGACGATCAATCAGAGTCCTTCAGATCTCCTTTTACAAGAAGAGGCAATGGT 780 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 AGGTCAATGGAGGATCAATCAGAGTCCTTCAGATCTCCTTTTACAAGAAGAGGCAATGGG 780 Query 781 AGATCATACGGAGATTTAACTGTTCCAGAATCAGACATATCCTTTATCAGTTCCGGAAGA 840 | ||||||||| ||| | ||||||| |||||||||||||| ||||| ||||| |||||| Sbjct 781 AAATCATACGGTGATCTGTCTGTTCCGGAATCAGACATATCTTTTATTAGTTCTGGAAGA 840 Query 841 CCAAGCATTGACCGTATCTTCCCTTCTCTATATGACAACAATGATCCAAGCC-GAACTCC 899 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 841 CCAAGCATTGACCGTATCTTCCCTTCTCTATATGACAACAATGATCCAA-CCAGAACTCC 899 Query 900 TCCTAGGCTTTCAAATTTCTCAGACATGGACTATAGTTCTAGCCTTGATCAGTCTTCCAA 959 ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 900 TCCTAGGCTGTCAAATTTCTCAGACATGGACTATAGTTCTAACCTTGATCAGTCTTCCAA 959 Query 960 CTATGGAAGGAGATCAGTGGATATGAACTCACCCACTGATTTCGAGAGCGAAAGATTTTC 1019 |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct 960 CTATGGAAGGAGATCAGTGGATTTGAACTCACCTACTGATTTCGAGAGCGAAAGATTTTC 1019 Query 1020 ATCCGCCTCTCAATCAATAGATGATGTAGAGGCTGAGATGAGGAGGCTTAAACTGGAGTT 1079 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1020 ATCCGCCTCTCAATCAATAGATGATGTAGAGGCTGAGATGAGGAGGCTTAAACTGGAGTT 1079 Query 1080 GAAGCAGACTATGGAAATGTATAGTACAGCTTGCAAAGAAGCACTCACAGCAAAACAAAA 1139 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1080 GAAGCAGACTATGGAAATGTACAGTACAGCTTGCAAAGAAGCACTCACAGCAAAACAAAA 1139 Query 1140 GGCGACTGAGCTTCAACGTTGGAAGTTAGAAGAAGAGAGAAAACTAGAAGAAGCGAGAAA 1199 |||||| |||||||| ||||||||||||||||||||||| ||||||||||| || ||| | Sbjct 1140 GGCGACGGAGCTTCAGCGTTGGAAGTTAGAAGAAGAGAGGAAACTAGAAGAGGCAAGACA 1199 Query 1200 TGCAGAGGAAGCAGCATTAGCCATTGCAGAGAAAGAGAAAGCAAAGTCAAAAGCAGCTAT 1259 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct 1200 TGCAGAGGAAGCAGCATTAGCCATCGCAGAGAAAGAGAAAGCAAAGTCGAAAGCGGCTAT 1259 Query 1260 GGAGGCAGCTGAAGCAGCTCAAAGGATTGCTGAATTAGAGGCTAAGAAGAGAGTCAACGC 1319 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1260 GGAGGCAGCTGAAGCAGCTCAAAGAATTGCTGAATTAGAGGCTAAGAAGAGAGTCAACGC 1319 Query 1320 GGAAATGAAAGCTTTAAAAGAGTCAGAGGAGAAAACAAAGGCTCTTACCGCTTTAGCAAA 1379 ||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||| Sbjct 1320 GGAAATGAAAGCTCTAAAGGAGTCTGAGGAGAAAACAAAGGCTCTTACTGCTTTAGCAAA 1379 Query 1380 CTCAGATGTCAGGTATAGGAAGTACTCCATTGAAGATATTGAGCTTGCAACAGAGTTTTT 1439 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct 1380 CTCAGATGTCAGGTATAGGAAGTACTCCATTGAAGAGATTGAGCTTGCAACCGAGTTTTT 1439 Query 1440 CGCTGAGAAATATAAGATTGGAGAAGGTGGTTATGGACCTGTCTACAAATGTTATCTTGA 1499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1440 CGCTGAGAAATATAAGATTGGAGAAGGTGGTTATGGACCTGTCTACAAATGTTATCTTGA 1499 Query 1500 TCATACACCAGTGGCTGTTAAAGTTCTTCGTCCCGATGCAGCTCAAGGAAGATCGCAATT 1559 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || || Sbjct 1500 TCATACACCAGTGGCTGTTAAAGTTCTTCGTCCTGATGCAGCTCAAGGAAGATCTCAGTT 1559 Query 1560 TCAACAAGAGGTCGAGGTATTGAGCTGCATTAGGCATCCGAACATGGTTCTACTTCTTGG 1619 ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1560 CCAACAAGAGGTTGAGGTATTGAGCTGCATTAGGCATCCTAACATGGTTCTACTTCTTGG 1619 Query 1620 GGCTTGTCCGGAATGCGGATGTTTAGTCTACGAGTTCATGGCTAATGGGAGCTTAGAAGA 1679 ||| || |||||||| |||||||||||||||||||||||||| || || ||||||||||| Sbjct 1620 GGCATGCCCGGAATGTGGATGTTTAGTCTACGAGTTCATGGCCAACGGAAGCTTAGAAGA 1679 Query 1680 TCGTCTTTTCAGACTAGGAAACAGTCCACCTCTCTCGTGGCAGATGAGATTTAGAATCGC 1739 ||||||||||||| |||||||||| ||||||||||||||||||||||| || ||||| || Sbjct 1680 TCGTCTTTTCAGATTAGGAAACAGCCCACCTCTCTCGTGGCAGATGAGGTTCAGAATTGC 1739 Query 1740 TGCAGAGATAGGCACTGGATTGTTGTTCTTGCACCAAGCTAAACCTGAGCCTCTTGTTCA 1799 ||| ||||| ||||||||| |||||||||||||||| ||||||||||||||||| ||||| Sbjct 1740 TGCTGAGATTGGCACTGGACTGTTGTTCTTGCACCAGGCTAAACCTGAGCCTCTAGTTCA 1799 Query 1800 CCGTGATCTCAAACCAGGAAACATCTTGCTAGACCGTAACTTCGTCAGCAAGATATCTGA 1859 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1800 CCGTGATCTCAAACCAGGAAACATCTTGCTAGACCGTAACTTCGTCAGCAAGATTTCTGA 1859 Query 1860 TGTTGGTTTAGCTAGATTGGTCCCTCCAACAGTTGCAGACACAGTGACACAATACCGCAT 1919 |||||||||||| || | ||||||||| | ||||||||||| |||||||| ||||| || Sbjct 1860 TGTTGGTTTAGCCAGGCTAGTCCCTCCATCGGTTGCAGACACGGTGACACAGTACCGAAT 1919 Query 1920 GACTTCAACCGCTGGCACATTCTGTTATATCGACCCAGAGTATCAACAAACAGGAATGTT 1979 |||||||||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||| Sbjct 1920 GACTTCAACCGCGGGCACGTTCTGTTACATCGATCCAGAGTATCAGCAAACAGGAATGTT 1979 Query 1980 GGGTGTGAAATCAGACATTTACTCACTTGGAATTATGTTTCTACAGTTGATAACAGCAAA 2039 |||||||||||| |||||||||||||| || ||||||||||| ||||||||||||||||| Sbjct 1980 GGGTGTGAAATCCGACATTTACTCACTCGGCATTATGTTTCTGCAGTTGATAACAGCAAA 2039 Query 2040 ACCACCAATGGGTCTAACTCATTATGTCGAGAGAGCACTAGAGAAAGGAACTTTGGTTGA 2099 |||||||||||| ||||| |||||||||||||||||||| |||||||||||||||| ||| Sbjct 2040 ACCACCAATGGGGCTAACCCATTATGTCGAGAGAGCACTCGAGAAAGGAACTTTGGCTGA 2099 Query 2100 TTTACTCGATCCAGTTGTTTCTGATTGGCCAATGGAAGACACTGAAGAGTTTGCTAAATT 2159 |||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2100 TTTACTTGATCCAGCTGTTTCTGATTGGCCAATGGAAGACACAGAAGAGTTTGCTAAATT 2159 Query 2160 AGCTCTTAAATGTGCAGAGCTAAGGAGAAAAGATAGACCTGATCTTGCTAAAGTTATTTT 2219 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || || Sbjct 2160 AGCTCTTAAATGTGCAGAGCTAAGGAGAAAAGACAGACCTGATCTTGCTAAAGTCATATT 2219 Query 2220 GCCTGAGCTAAATAGATTAAGAACACTTGCTGATGAATCATCACATTCTGTAGTAGTCGG 2279 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 2220 GCCTGAGCTAAACAGATTAAGAACACTTGCTGACGAATCATCACATTCTGTAGTAGTCAG 2279 Query 2280 CAATAGCCCTCTACCATCTCCAACTGGTAGCCAAAGTTCTTTGAAACTGGAACATATGAG 2339 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2280 CAATAGCCTTGTACCATCTCCAACTGGTAGCCAAAGTTCTTTGAAACTGGAACATATGAG 2339 Query 2340 TGGTGCTTCTATCTCAGTGCCTCAGT 2365 |||||||||||||||||||||||||| Sbjct 2340 TGGTGCTTCTATCTCAGTGCCTCAGT 2365 > Ahg491618 jgi|Araly1|491618|fgenesh2_kg.7__1051__AT4G31230.1 Length=2469 Score = 1269 bits (687), Expect = 0.0 Identities = 1337/1646 (81%), Gaps = 64/1646 (4%) Strand=Plus/Plus Query 711 TCAACAACGCAGGTCAATAGACGATCAATCAGAGTCCTTCAGATCTCCTTTTACAAGAAG 770 ||| || |||||||| | |||||||| ||||| |||||||| || || | || ||||| Sbjct 663 TCAGCATCGCAGGTCCCTTGACGATCAGTCAGATTCCTTCAGGTCACCCTACACTAGAAG 722 Query 771 AGGC---AATGGTAGATCATACGGAGATTTAACTGTTCCAGAATCAGACATATCCTTTAT 827 |||| ||||| |||||||| ||||| || | | || || || ||||||| ||| | Sbjct 723 AGGCTTGAATGGGAGATCATATGGAGACCTATCAATCCCGGATTCTGACATATGCTTCAA 782 Query 828 CAGTTCCGGAAGACCAAGCATTGACCGTATCTTC-CCTT-CTCTATATGACAACAATGAT 885 ||| || ||||||||||||||||| || | | || |||| || | || ||||| ||| Sbjct 783 CAGCTCTGGAAGACCAAGCATTGAGCGCAAC-TCTCCTTCCT-TGTACGACAATTCGGAT 840 Query 886 CCAAGCCGAACTCCTCCTAGGCTTTCAAATTTCTCAGACATGGACTATAGTTCTAGCCTT 945 |||| ||| |||||||| ||||| ||||||||||||||||| |||||| | ||| | | Sbjct 841 CCAAACCGGACTCCTCCAAGGCTATCAAATTTCTCAGACATTGACTAT-G--GTAG-C-T 895 Query 946 GATC-AGTC-TTCCAACTAT-GGAAGGAGATCAGTGGATATGAA-CTCACCCACTG-ATT 1000 || |||| | | || | |||||||| ||| ||||||| || |||||| |||| || Sbjct 896 --TCGAGTCAAT-GACCT-TCGGAAGGAGGTCAATGGATAT-AAGCTCACCAACTGCTTT 950 Query 1001 -T---C--G---A---GAG--CGAAAGATTTTCATCCGCCTCTCAATCAATAGATGATGT 1046 | | | | ||| ||||| |||||||| || |||||| | |||||||| Sbjct 951 CTCAACTGGCTCATTTGAGAATGAAAGGTTTTCATCGGCTTCTCAAGGAGGGGATGATGT 1010 Query 1047 AGAGGCTGAGATGAGGAGGCTTAAACTGGAGTTGAAGCAGACTATGGAAATGTATAGTAC 1106 ||||||||||||||||||||||||||||||| |||| || || ||||||||||| ||||| Sbjct 1011 AGAGGCTGAGATGAGGAGGCTTAAACTGGAGCTGAAACAAACGATGGAAATGTACAGTAC 1070 Query 1107 AGCTTGCAAAGAAGCACTCACAGCAAAACAAAAGGCGACTGAGCTTCAACGTTGGAAGTT 1166 ||||||||| ||||| |||||||||||||| ||||| || ||||||||||| |||||||| Sbjct 1071 AGCTTGCAAGGAAGCTCTCACAGCAAAACATAAGGCAACAGAGCTTCAACGCTGGAAGTT 1130 Query 1167 AGAAGAAGAGAGAAAACTAGAAGAAGCGAGAAA-T-GCAGAGGAAGCAGCATTAGCCATT 1224 || |||||| || ||| | ||||| || | || | ||||||||||| |||||||||||| Sbjct 1131 AGCAGAAGAAAGGAAATTCGAAGAGGC-A-AAGCTTGCAGAGGAAGCTGCATTAGCCATT 1188 Query 1225 GCAGAGAAAGAGAAAGCAAAGTCAAAAGCAGCTATGGAGGCAGCTGAAGCAGCTCAAAGG 1284 || ||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||| Sbjct 1189 GCGGAGAAGGAGAAAGCAAAGTCCAAAGCAGCAATGGAAGCAGCTGAAGCAGCTCAAAGG 1248 Query 1285 ATTGCTGA-ATTAGAGGCTAAGAA-GAGAGTCAACGCGGAAATGAAAGCTTTAAAAGAGT 1342 |||||||| || ||| | ||| ||||||| | || |||||||||||| | || || | Sbjct 1249 ATTGCTGATATC-GAGTCCC-GAAAGAGAGTCGATGCAGAAATGAAAGCTCTGAAGGAAT 1306 Query 1343 CAGAGGAGAAAACAAAGGCTCTT-ACCGCTTTAGCAAACTCAGATGTCAGGTATAGGAAG 1401 |||||| || |||||| || | | | ||||||||||||||||||||||| || |||||| Sbjct 1307 CAGAGGCGAGAACAAAAGC-CGTGAATGCTTTAGCAAACTCAGATGTCAGATACAGGAAG 1365 Query 1402 TACTCCATTGAAGATATTGAGCTTGCAACAGAGTT-TTTCGCTGAGAAATATAAGATTGG 1460 |||||||| || || |||||| |||||||||||| ||| | ||||||||| ||||| || Sbjct 1366 TACTCCATCGAGGAGATTGAGGATGCAACAGAGTTCTTT-GATGAGAAATACAAGATCGG 1424 Query 1461 AGAAGGTGGTTATGGACCTGTCTACAAATGTTATCTTGATCATACACCAGTGGCTGTTAA 1520 |||||| |||||||||||||||||||| |||||||| ||||| ||||| |||||||| || Sbjct 1425 AGAAGGCGGTTATGGACCTGTCTACAAGTGTTATCTGGATCACACACCTGTGGCTGTGAA 1484 Query 1521 AGTTCTT-CGTCCC-GATGCAGCTCAAGGAAGATCGCAATTTCAACAAGAGGTCGAGGTA 1578 || | || || ||| |||||||||||||| || || || ||||| |||||||| || || Sbjct 1485 AGCT-TTGCG-CCCAGATGCAGCTCAAGGCAGGTCACAGTTTCAGCAAGAGGTTGAAGTG 1542 Query 1579 TTGAGCTGCATTAGGCATCCGAACATGGTTCTACTTCTTGGGGCTTGTCCGGAATGCGGA 1638 || ||| | || ||||| || ||||||||||| || ||||| || || || ||||| ||| Sbjct 1543 TTAAGCAGTATAAGGCACCCTAACATGGTTCTTCTGCTTGGAGCATGCCCAGAATGTGGA 1602 Query 1639 TGTTTAGTCTACGAGTTCATGGCTAATGGGAGCTTAGAAGATCGTCTTTTCAGACTAGGA 1698 || ||||| || ||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 1603 TGCTTAGTGTATGAGTTCATGGCTAATGGGAGCTTAGAAGACCGTCTTTTCAGAGAAGGA 1662 Query 1699 AACAGTCCACCTCTCTCGTGGCAGATGAGATTTAGAATCGCTGCAGAGATAGGCACTGGA 1758 |||| || || ||||| ||||| | ||||| ||||| ||||||||||| ||||||| | Sbjct 1663 GACAGCCCGCCCCTCTCTTGGCAAACAAGATTCAGAATTGCTGCAGAGATCGGCACTGTA 1722 Query 1759 TTGTTGTTCTTGCACCA-AGCTAAACCTGAGCCTCTTGTTCACCGTGATCTCAAACCAGG 1817 |||||||| | ||||| | ||||||| || || || |||||||||||||||||||||| Sbjct 1723 CTGTTGTTCCTCCACCAGA-CTAAACCAGAACCACTGGTTCACCGTGATCTCAAACCAGC 1781 Query 1818 AAACATCTTGCTAGACCGTAACTTCGTCAGCAAGATAT-CTGATGTTGGTTTAGCTAGAT 1876 ||| ||||| |||||||| ||||| ||||||||| | | |||||||||| || ||||| Sbjct 1782 AAATATCTTACTAGACCGCAACTTTGTCAGCAAGGT-TGCTGATGTTGGCTTGGCTAGGC 1840 Query 1877 TGGTCCCTCCAACAGTTGCAGACACAGTGACACAATACCGCATGACTTCAACCGCTGGCA 1936 ||||||||||| | |||||| |||| ||||| |||||||||||||| ||||| ||||||| Sbjct 1841 TGGTCCCTCCATCCGTTGCAAACACCGTGACGCAATACCGCATGACATCAACTGCTGGCA 1900 Query 1937 CATTCTGTTATATCGACCCAGAGTATCAACAAACAGGAATGTTGGGTGTGAAATCAGACA 1996 |||| || || |||||||||||||||||||| || || ||| ||||||||||||| |||| Sbjct 1901 CATTTTGCTACATCGACCCAGAGTATCAACAGACGGGGATGCTGGGTGTGAAATCTGACA 1960 Query 1997 TTTACTCACTTGGAATTATGTTTCTACAGTTGATAACAGCAAAACCACCAATGGGTCTAA 2056 |||| || ||||| ||||||||||| ||||| ||||||| ||||||||| |||||||||| Sbjct 1961 TTTATTCGCTTGGCATTATGTTTCTGCAGTTAATAACAGGAAAACCACCTATGGGTCTAA 2020 Query 2057 CTCATTATGTCGAGAGAGCACTAGAGAAAGG-AACTTTGGTTGATTTACTCGATCCAGTT 2115 | |||||||| || ||||| || ||||| || || |||| ||||| |||||||| | | Sbjct 2021 CCCATTATGTGGAAAGAGCCCTCGAGAAGGGTAA-TTTGAAAGATTTGCTCGATCCTGCT 2079 Query 2116 GTTTCTGATTGGCCAATGGAAGACACTGA-AGAGTTTGCTAAATTAGCTCTTAAATGTGC 2174 || ||||||||||| | ||||| || | ||||||||| || || ||||| || || || Sbjct 2080 GTGTCTGATTGGCCTGTTGAAGATACC-ACAGAGTTTGCCAAGTTGGCTCTCAAGTGCGC 2138 Query 2175 AGAGCTAAGGAGAAAAGATAGACCTGATCTTGCTAAAGTTATTTTGCCTGAGCTAAATAG 2234 |||| ||||| ||||||| |||||||||||| | |||||||| ||||| ||||| || || Sbjct 2139 AGAGATAAGGCGAAAAGACAGACCTGATCTTTCCAAAGTTATATTGCCAGAGCTCAACAG 2198 Query 2235 ATTAAGAACACTTGCTGATGAATCATCACATTCTGTAGTAGTCGGCAATAGCCCTCT-AC 2293 ||||||| ||||||||| |||||| || | ||| ||||||| |||||||| | || Sbjct 2199 ATTAAGAGTACTTGCTGAAGAATCAACAAAGACTGCAGTAGTCATTAATAGCCC-CGGAC 2257 Query 2294 CATCTCCAACTG-GTAGCCAAAGTTC 2318 || | || |||| | || |||||||| Sbjct 2258 CAACCCCCACTGAG-AGTCAAAGTTC 2282 Score = 326 bits (176), Expect = 6e-88 Identities = 495/643 (77%), Gaps = 46/643 (7%) Strand=Plus/Plus Query 61 GCTGTTGCAATAGACAAAGACAAAAGCAGCCAACAC-GCTCTTAAATGGGCTGTTGATAA 119 ||||| || || |||| |||||||| ||||||| || ||||| ||||||||||||||||| Sbjct 55 GCTGTGGCCATCGACAGAGACAAAAACAGCCAA-ACTGCTCTGAAATGGGCTGTTGATAA 113 Query 120 TTTGTTGCAGCGAGGCCAATCCGTCATTCTTGTCCACGTCAAGCTTCGACCTTC-TCCAT 178 |||||||||| ||||||| ||||| | || || || ||||||| ||| |||| | | | Sbjct 114 TTTGTTGCAGAAAGGCCAAACCGTCGTCCTCGTACATGTCAAGCCTCGGGCTTCAT-CTT 172 Query 179 TG--AATAATAGCGCTTCTCTTC-A-TGCTTCCTCTGCAAAGCTGAGCC--------AA- 225 || | || | | |||| || | | | |||| | ||| |||||| || Sbjct 173 TGTCCACAA-A-CCCTTC-AATCAACT-CAAACTCTTCTAAGATGAGCCAAATAAATAAT 228 Query 226 GATTCTTCATTGGTATGCAGAGATCCAGAAGGCAT-TTCCAAAGAAATATTTCTTCCTTT 284 |||||||||||||| || |||| ||||||||| | || ||| | | || |||||||| Sbjct 229 GATTCTTCATTGGTGTGTGGAGACCCAGAAGGC-TCTTATAAACAGTTGTTCCTTCCTTT 287 Query 285 CCGTTGCT-TCTGCACACGCAAAGACATTCAATGCCAAGATGTGTTGCTT-GAGGAGTCC 342 ||||| | |||| |||||||||| || |||||| |||||||||| || |||||||| Sbjct 288 TCGTTG-TCTCTGTTCACGCAAAGATATACAATGCAAAGATGTGTT-ATTGGAGGAGTCA 345 Query 343 GATGTTGCCAAAGCATTGGTCGAATACGTAAACCAAG-CGGCCATTGAGGTTTTAGTAGT 401 ||||| || ||||| || |||||||||| ||| || | | | |||||||| || || || Sbjct 346 GATGTGGCGAAAGCTTTAGTCGAATACGCAAATCAGGTC-GTGATTGAGGTATTGGTGGT 404 Query 402 TGGTTCCTCCAGC-AAAGGTGGTTTTCTCAGGTTCAACAAACCTACAGATATTCCAGGCA 460 |||||||| | | |||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 405 TGGTTCCT-CTTCAAAAGGTGGCTTTCTCAGGTTCAACAAACCTACAGATATTCCAGGAA 463 Query 461 GCATAACAAAAAACGCTCCTGATTTCTGCACGGTTTATATCATTTCCAAAGGAAAGATT- 519 ||| || || | ||| ||||||||||||||||||||| |||| ||||||||||| || Sbjct 464 CCATCACCAAGACCGCACCTGATTTCTGCACGGTTTATGTCATAACCAAAGGAAAGCTTT 523 Query 520 CAAACAATGAGATCAGCTTCTCGTTCTGCACC--CATGACTGCTCC-TCTACGCAGTTCA 576 ||| ||| || | ||||||||||| |||| || | || | |||| | |||||| | || Sbjct 524 CAA-CAAAGAAAACAGCTTCTCGTGCTGCGCCGTC-TGTTT-CTCCAT-TACGCA-TCCA 578 Query 577 G-TTCAACC-ACCTAGCTTAAAGCCTCCTCAACCTATGCCTTCTACTTCCGCTAACAGTC 634 | |||||| || |||||||||||| | || |||| |||||||| | | |||||| | Sbjct 579 GCTTCAACAGAC-TAGCTTAAAGCCACATCCACCTTTGCCTTCTGCAACTACTAACA--C 635 Query 635 TGCGAGCCGATAGACGGTCTTTTGAGTCTAACCAACGAAGGTC 677 |||| || |||| ||| ||||||||| | || || ||||| Sbjct 636 AA-GAGCTGAGAGACAGTCATTTGAGTCTCAGCATCGCAGGTC 677 > Ahg497409 jgi|Araly1|497409|fgenesh2_kg.365__1__AT5G61550.1 Length=2618 Score = 86.1 bits (46), Expect = 1e-15 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 1796 TTCACCGTGATCTCAAACCAGGAAACATCTTGCTAGACCGTAACTTCGTCAGCAA 1850 |||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 1882 TTCACCGTGATCTCAAACCAGGAAACATCTTGCTTGACCACAACTTCGTCAGCAA 1936 > Ahg496318 jgi|Araly1|496318|fgenesh2_kg.8__2134__AT5G61550.1 Length=2432 Score = 86.1 bits (46), Expect = 1e-15 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 1796 TTCACCGTGATCTCAAACCAGGAAACATCTTGCTAGACCGTAACTTCGTCAGCAA 1850 |||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 1696 TTCACCGTGATCTCAAACCAGGAAACATCTTGCTTGACCACAACTTCGTCAGCAA 1750 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 89169263545 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5