BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G24630.1
Length=2714
Score E
Sequences producing significant alignments: (Bits) Value
Ahg932530 jgi|Araly1|932530|scaffold_400518.1 3463 0.0
Ahg491580 jgi|Araly1|491580|fgenesh2_kg.7__1013__AT4G31590.1 2228 0.0
> Ahg932530 jgi|Araly1|932530|scaffold_400518.1
Length=2116
Score = 3463 bits (1875), Expect = 0.0
Identities = 2037/2117 (96%), Gaps = 4/2117 (0%)
Strand=Plus/Plus
Query 365 TTTGGGTCTTGAGCTTTGAAATATGGCTCCAAGGTTTGATTTTTCAGATTTATGGGCCAA 424
|||| ||||||||| |||||| ||||||||||||||||||||||||||||| |||| ||
Sbjct 1 TTTGAGTCTTGAGC-TTGAAAAATGGCTCCAAGGTTTGATTTTTCAGATTTGTGGGTGAA 59
Query 425 GGAAACAAGGAGAGGTACACCAGTAGTGGTGAAAATGGAGAATCCAAATTACTCAATAGT 484
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 60 GGAAACAAGGAGAGGTACACCAGTAGTGGTGAAAATGGAGAATCCCAATTACTCAATCGT 119
Query 485 TGAAGTAGAGGAACCAGACTCTGCATTTCAACCAATGGAGAAGAGTAGAGGCAAGAACGC 544
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 120 TGAAGTTGAGGAACCAGACTCTGCATTTCAACCAATGGAGAAGAGTAGAGGCAAAAATGC 179
Query 545 TAAGCAAGTGACTTGGGTTTTGCTTCTTAAAGCTCACAAAGCTGTTGGATGTCTCACTTG 604
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 180 TAAGCAAGTGACTTGGGTACTGCTTCTTAAAGCTCACAAAGCTGTTGGATGTCTCACTTG 239
Query 605 GGTCGCTACAGTGTTCTGGTCTCTTCTTGGTTCAGTCAAGAGACGGCTCAGTTTCACTCA 664
| | || |||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 240 GTTAGCAACAGTGTTCTGGTCTCTTCTTGGTTCAGTCAAGAGAAGGCTTAGTTTCACTCA 299
Query 665 TCCACTAGGCTCTGAGAGACTTGGTAGAGACGGATGGCTTTTCTCAGCTATTAAGCTCTT 724
||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 300 CCCATTAGGCTCTGAGAGACTTGGTAGAGACAGATGGCTTTTCTCAGCTATTAAGCTCTT 359
Query 725 CTTAGTTGCTTCATTAGCTATTCTTGCGTTTGAGTTAGTTGCTTATTACAGAGGATGGCA 784
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 360 CTTAGTTGCTTCATTAGCTATTCTTGGGTTTGAGTTAGTTGCTTATTACAGAGGATGGCA 419
Query 785 TTACTTTAAAAACCCTAATTTACACATTCCTACAAGCAAACTTGAGATCCAGAGCTTGCT 844
|||||| |||||||||||||||||||| || ||||||||||||||||||||||||||| |
Sbjct 420 TTACTTCAAAAACCCTAATTTACACATCCCAACAAGCAAACTTGAGATCCAGAGCTTGTT 479
Query 845 TCATCTG-TTCTATGTCGGTTGGTTGAGTTTAAGAGCTGATTATATTGCTCCTCCAATCA 903
||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 TCATCTGCTT-TATGTTGGTTGGTTGAGTTTAAGAGCTGATTATATTGCTCCTCCAATCA 538
Query 904 AAGCTCTCTCAAAGTTTTGTATTGTACTGTTCCTTGTACAGTCTGTAGATCGTTTGATTC 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 AAGCTCTCTCAAAGTTTTGTATTGTACTGTTCCTTGTACAGTCTGTAGATCGTTTGATTC 598
Query 964 TTTGCTTAGGCTGTCTTTGGATCAAGTTTAAGAAGATTAAGCCGAGAATCGATGAAGAGC 1023
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 599 TTTGCTTAGGCTGTTTTTGGATCAAGTTTAAGAAGATTAAGCCGAGAATCAATGATGAGC 658
Query 1024 ATTTTCGAAATGATGATTTTGAAGGATCAGGGTCTGAGTATCCAATGGTTCTTGTTCAGA 1083
|||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 659 CTTTTCGAAATGATGATGTTGAAGGATCAGGATCTGAGTATCCAATGGTTCTTGTTCAGA 718
Query 1084 TACCAATGTGCAATGAGAGAGAGGTATATGAGCAATCTATATCTGCTGTGTGTCAGCTTG 1143
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 719 TACCAATGTGCAATGAGAGAGAGGTATATGAGCAATCTATGTCTGCTGTATGTCAGCTTG 778
Query 1144 ACTGGCCAAAAGATCGACTGCTAGTTCAGGTTCTAGACGATTCAGATGATGAAAGCATCC 1203
||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 779 ACTGGCCGAAAGATCGACTGCTAATTCAGGTTCTAGACGATTCGGATGATGAAAGCATCC 838
Query 1204 AGGAGTTAATTAGAGATGAGGTTACTAAATGGAGCCAAAAGGGTGTCAACATTATTTACC 1263
|| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 839 AGCAGTTAATTAGAGCTGAGGTTACTAAATGGAGCCAAAAGGGTGTCAACATAATTTACC 898
Query 1264 GGCATCGTTTGGTTAGAACTGGTTACAAAGCTGGTAACCTCAAATCTGCAATGAGCTGTG 1323
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 899 GGCATCGCTTGGTTAGAACTGGATACAAAGCTGGTAACCTCAAATCTGCAATGAGCTGTG 958
Query 1324 ATTATGTGGAAGCTTACGAGTTTGTTGCAATTTTCGATGCGGATTTCCAACCTAACTCGG 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 ATTATGTGGAAGCTTACGAGTTTGTTGCAATTTTCGATGCGGATTTCCAACCTAACTCGG 1018
Query 1384 ATTTCCTTAAACTAACCGTGCCACATTTCAAGGAGAAGCCTGAGTTAGGTCTGGTTCAGG 1443
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 ATTTCCTTAAACTAACTGTTCCACATTTCAAGGAGAAGCCTGAGTTAGGTCTGGTTCAGG 1078
Query 1444 CTAGGTGGGCGTTTGTGAACAAAGACGAGAACTTGTTGACCCGTCTTCAAAACATCAATC 1503
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1079 CTAGGTGGGTGTTTGTGAACAAAGATGAGAACTTGTTGACCCGTCTTCAAAACATCAATC 1138
Query 1504 TGTGTTTTCATTTCGAGGTTGAGCAGCAGGTTAATGGGGTGTTCTTGAATTTCTTTGGTT 1563
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1139 TGTGTTTTCATTTCGAAGTTGAGCAGCAGGTTAATGGCGTGTTCTTGAATTTCTTTGGTT 1198
Query 1564 TCAATGGAACTGCTGGAGTATGGAGAATTAAAGCCCTTGAGGAATCTGGAGGTTGGCTTG 1623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 TCAATGGAACTGCTGGAGTATGGAGAATTAAAGCCCTTGAGGAATCTGGAGGTTGGCTTG 1258
Query 1624 AAAGGACAACCGTCGAGGATATGGATATAGCTGTTCGGGCTCATCTTCATGGATGGAAAT 1683
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1259 AAAGGACAACCGTCGAGGATATGGATATAGCTGTTCGAGCTCATCTCCATGGATGGAAAT 1318
Query 1684 TCATATATCTTAACGATGTCAAGGTTCTTTGTGAAGTTCCTGAGTCATATGAAGCATACA 1743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 TCATATATCTTAACGATGTCAAGGTTCTTTGTGAAGTTCCTGAGTCATATGAAGCATACA 1378
Query 1744 AGAAGCAGCAACATCGATGGCACTCGGGACCAATGCAGCTATTTCGCTTGTGTCTGCGAT 1803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 AGAAGCAGCAACATCGATGGCACTCGGGACCAATGCAGCTATTTCGCTTGTGTCTGCGAT 1438
Query 1804 CAATCTTGACCTCTAAGATTGCAATGTGGAAGAAAGCAAATCTGATACTACTATTCTTCC 1863
|||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||
Sbjct 1439 CAATCTTGACCTCTAAGATTGCGATGTGGAAGAAGGCAAATCTGATACTTCTATTCTTCC 1498
Query 1864 TTCTAAGGAAACTCATACTTCCTTTCTACTCCTTCACATTGTTCTGTGTAATCCTTCCAA 1923
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1499 TTCTAAGGAAACTCATACTTCCTTTCTACTCCTTCACATTGTTCTGCGTAATCCTTCCAA 1558
Query 1924 TCACCATGTTCGTTCCAGAAGCCGAGCTTCCTATTTGGGTCATCTGCTATGTACCGATAT 1983
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1559 TCACCATGTTCGTTCCAGAAGCCGAGCTTCCTGTTTGGGTCATCTGCTATGTACCGATAT 1618
Query 1984 TCATGTCACTACTCAACATTCTTCCTGCTCCAAAGTCTTTCCCTTTCATTGTCCCTTACC 2043
|||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1619 TCATGTCATTACTGAACATTCTTCCTGCTCCAAAGTCATTCCCTTTCATTGTCCCTTACC 1678
Query 2044 TATTGTTTGAGAACACTATGTCGGTCACCAAGTTCAACGCGATGGTATCTGGATTATTCC 2103
| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1679 TCCTGTTTGAGAACACAATGTCGGTCACCAAGTTCAACGCGATGGTATCTGGATTATTCC 1738
Query 2104 AACTCGGTAGCTCTTACGAATGGATTGTAACAAAGAAAGCAGGAAGATCATCAGAGTCTG 2163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 AACTCGGTAGCTCTTACGAATGGATTGTAACAAAGAAAGCAGGAAGATCATCAGAGTCTG 1798
Query 2164 ATCTTTTAGCTCTCACTGATAAAGAATCCGAGAAGATGCCAAACCAAATCCTAAGAGGAG 2223
||||||||| |||||| |||| ||||||| |||||||| ||||||||||||||||||||
Sbjct 1799 ATCTTTTAGGTCTCACCGATATAGAATCCAAGAAGATGGCAAACCAAATCCTAAGAGGAA 1858
Query 2224 TTTCAGACAGTGAGCTCTTGGAGATAAGCCAAGTTGAGGAACAGAAAAAACAACCGGTTT 2283
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1859 TTTCAGACAGTGAGCTCTTGGAGATAAGCCAAGTAGAGGAACAGAAAAAACAACCGGTTT 1918
Query 2284 CCGTGAAGAAAACCAATAAGATATTCCACAAAGAGCTCGCGCTAGCTTTTCTTTTGCTCA 2343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1919 CCGTGAAGAAAACCAATAAGATATTCCACAAAGAGCTCGCGCTAGCTTTTCTTTTGCTCA 1978
Query 2344 CTGCAGCAGTTAGGAGTCTTTTGGCCTCACAAGGAGTACATTTCTACTTCCTATTGTTCC 2403
| ||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||
Sbjct 1979 CCGCAGCAGTTAGGAGTCTCTTGGCCTCACAAGGAGTGCATTTCTACTTCCTGTTGTTCC 2038
Query 2404 AAGGTCTCACCTTTCTTCTTGTGGGTCTCGATCTCATAGGGGAGCAGATGAGTTAAGAAA 2463
|||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||
Sbjct 2039 AAGGTCTCACCTTTCTTCTTGTTGGTCTCGATCTCATAGGCGAGCAGATGAGGTAAGAAA 2098
Query 2464 CCAAAGTagaagaagaa 2480
|||||| |||||| |||
Sbjct 2099 CCAAAGAAGAAGA-GAA 2114
> Ahg491580 jgi|Araly1|491580|fgenesh2_kg.7__1013__AT4G31590.1
Length=2672
Score = 2228 bits (1206), Expect = 0.0
Identities = 1920/2257 (85%), Gaps = 80/2257 (4%)
Strand=Plus/Plus
Query 251 TCACTCAAAGTCGCTACC-TTTAGGTTT-CTCAAGATGGGTTTAGCTT-AAATCTTCCAA 307
||||||||||| ||||| ||| | ||| || || |||||||| | || ||||| ||| |
Sbjct 84 TCACTCAAAGTTACTACCTTTTTGTTTTCCTGAAAATGGGTTTTGTTTAAAATC-TCCCA 142
Query 308 CTTTGAGATTT-GGG-T-CTTAAACTCTA-ATCAAGAGA-TTCAACTA-CTTCTTC---T 358
||||||||||| ||| | ||| || | | || ||||| |||||||| || ||| |
Sbjct 143 CTTTGAGATTTGGGGATCCTT--AC-C-ACATTTAGAGATTTCAACTAGGTTTTTCTATT 198
Query 359 TC-CAGATTTGGGTCTTGA-GCTTTGAAATATGGCTCCAAGGTTTGATTTTTCAGATTTA 416
|| | | || ||| || || | ||| |||||||||||||| |||||||||||||
Sbjct 199 TCTC-TACTT--GTC-AGAGGC--T-AAAGATGGCTCCAAGGTTGGATTTTTCAGATTGG 251
Query 417 TGGGCCAAGGAAACAAGGAGAGGTACACCAGTAGTGGTGAAAATGGAGAATCCAAATTAC 476
||||| ||||| || |||| ||| |||||||| |||||||||||||||||||| ||||||
Sbjct 252 TGGGCGAAGGACACGAGGAAAGGAACACCAGTTGTGGTGAAAATGGAGAATCCTAATTAC 311
Query 477 TCAATAGTTGAAGTAGA-GGAACCAGACTCTGCATTTCA-ACCAATGGAGAAGAGTAGAG 534
|| |||||||| | || || ||||| || || ||| | |||| |||||||||| ||||
Sbjct 312 TCTGTAGTTGAAATCGACGG-TCCAGATTCAGC-TTTTAGACCAGTGGAGAAGAGCAGAG 369
Query 535 GCAAGAACGCTAAGCAAGTGACTTGGGTTTTGCTTCTTAAAGCTCACAAAGCTGTTGGAT 594
||||||||||||||||||| ||||||||||||||||| |||||||| | ||||||||| |
Sbjct 370 GCAAGAACGCTAAGCAAGTCACTTGGGTTTTGCTTCTCAAAGCTCATAGAGCTGTTGGGT 429
Query 595 GTCTCACTTGGGTCGCTACAGTGTTCTGGTCTCTTCTTGGT-TCAGTCAAGAGACGGCTC 653
||||||||||| |||| || || || |||||||| |||||| || |||||| ||||||
Sbjct 430 GTCTCACTTGGCTCGCCACTGTCTTTTGGTCTCTCCTTGGTGCCA-TCAAGAAACGGCTT 488
Query 654 AGTTTCACTCATCCACTAGGCTCTGAGAGACTT-GGTAGAGACGGATGGCTTTTCTCAGC 712
||||||||||| ||||| |||||||||| | || || |||||| ||||||||||| | ||
Sbjct 489 AGTTTCACTCACCCACTTGGCTCTGAGA-AATTAGGCAGAGACAGATGGCTTTTCACTGC 547
Query 713 TATTAAGCTCTTCTTAGTTGCTTCATTAGCT-ATTCTTGCGTTTGAG-TTAGTTGCTTAT 770
|||||||||||||||| || ||| ||| || ||||| | ||||||| || |||||||||
Sbjct 548 CATTAAGCTCTTCTTAGCTGTTTCCTTA-CTGATTCTCGGGTTTGAGATT-GTTGCTTAT 605
Query 771 TACAGAGGATGGCATTACTTTAAAAACCCTAA-TTTACACATTCCTACAAGCAAACTTGA 829
| |||||||||||||||||| ||| ||||| || ||||| || || |||| ||||||
Sbjct 606 TTTAGAGGATGGCATTACTTTCAAAGTCCTAACCTT-CACATCCCCACTAGCACACTTGA 664
Query 830 GATCCAGAGCTTGCTTCATC-TGTTCTATGTCGGTTGGTTGA-GTTTAAGAGCTGATTAT 887
|||||||||| ||||||||| || | ||||| |||||||| | || ||||||||||||
Sbjct 665 GATCCAGAGCCTGCTTCATCTTG-TGTATGTTGGTTGGTTAACCCTT-AGAGCTGATTAT 722
Query 888 ATTGCTCCTCCAATCAAAGCTCTCTCAAAGTTTTGTATTGTACTGTTCCTTGTACAGTCT 947
||||||||||| |||||||||||||| | |||||||||||| ||||||||| |||||||
Sbjct 723 ATTGCTCCTCCTATCAAAGCTCTCTCCACGTTTTGTATTGTGCTGTTCCTTATACAGTCC 782
Query 948 GTAGATCGTTTGATTCTTTGCTTAGGCTGTCTTTGGATCAAGTTTAAGAAGATTAAGCCG 1007
|||||||||||||| |||||||| || ||| |||||||||||| |||||| |||||||||
Sbjct 783 GTAGATCGTTTGATACTTTGCTTGGGATGTTTTTGGATCAAGTATAAGAAAATTAAGCCG 842
Query 1008 AGAATCGATGAAGAGCATTTTCGAAATGATGATTTTGAAGGATCAGGGTCTGAGTATCCA 1067
||| | ||||| || | ||| || ||||||||| ||| ||||| || | ||||||||||
Sbjct 843 AGATTTGATGAGGAACCTTTCCGTAATGATGATGCTGAGGGATCTGGATTTGAGTATCCA 902
Query 1068 ATGGTTCTTGTTCAGATACCAATGTGCAATGAGAGAGAGGTATATGAGCAATCTATATCT 1127
||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 903 ATGGTTCTTGTTCAGATTCCAATGTGCAATGAGAGAGAGGTGTATGAACAATCTATATCT 962
Query 1128 GCTGTGTGTCAGCTTGACTGGCCAAAAGATCGACTGCTAGTTCAGGTTCTAGACGATTCA 1187
||||||||||| ||||||||||| ||||||||| | || ||||||||||| || |||||
Sbjct 963 GCTGTGTGTCAACTTGACTGGCCGAAAGATCGAATACTGGTTCAGGTTCTCGATGATTC- 1021
Query 1188 G-ATGATGAAAGCATCCAGGAGTTAATTAGAGATGAGGTTACTAAATGGAGCCAAAAGGG 1246
| | |||||||||||||| | ||||||| || ||||||| | |||||||||||||||||
Sbjct 1022 GAACGATGAAAGCATCCAACAATTAATTAAAGCTGAGGTTGCCAAATGGAGCCAAAAGGG 1081
Query 1247 TGTCAACATTATTTACCGGCATCGTTTGGTTAGAACTGGTTACAAAGCTGGTAACCTCAA 1306
|||||||| || ||| ||||||| |||||||||||||| || |||||||||||||||||
Sbjct 1082 AGTCAACATAATCTACAGGCATCGCTTGGTTAGAACTGGGTATAAAGCTGGTAACCTCAA 1141
Query 1307 ATCTGCAATGAGCTGTGATTATGTGGAAGCTTACGAGTTTGTTGCAAT-TTTCGATGCGG 1365
|| ||||||||||||||||| |||||||| ||||||| ||||||||| ||| ||||| |
Sbjct 1142 GTCAGCAATGAGCTGTGATTACGTGGAAGCATACGAGTATGTTGCAATATTT-GATGCCG 1200
Query 1366 ATTTCCAACCTAACT-CGGATTTCCTTAAACTAACCGTGCCACATTTCAAGGAGAAGCCT 1424
||||||||||| ||| ||||||||||||||||||| | |||||||||||||| || ||
Sbjct 1201 ATTTCCAACCT-ACTCCGGATTTCCTTAAACTAACAATTCCACATTTCAAGGATAACCCA 1259
Query 1425 GAGTTAGGTCTGGTTCAGGCTAGGTGGGCGTTTGTGAACAAAGACGAGAACTTGTTGACC 1484
||||| ||||| ||||| ||||| ||| | ||||||||||||||||||||||||||||||
Sbjct 1260 GAGTTGGGTCTAGTTCAAGCTAGATGGACATTTGTGAACAAAGACGAGAACTTGTTGACC 1319
Query 1485 CGTCTTCAAAACATCAATCTGTGTTTTCA-TTTCGAGGTTGAGCAGCAGGTTAATGGGGT 1543
|||||||| |||||||||||||||||||| ||| ||||| |||||||| || || || ||
Sbjct 1320 CGTCTTCAGAACATCAATCTGTGTTTTCACTTT-GAGGTGGAGCAGCAAGTGAACGGCGT 1378
Query 1544 GTTCTTGAATTTCTTTGGTTTCAATGGAACTGCTGGAGTATGGAGAATTAAAGCCCTTGA 1603
||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct 1379 GTTCTTGAACTTCTTTGGTTTCAATGGAACAGCTGGAGTTTGGAGAATTAAAGCCCTCGA 1438
Query 1604 GGAATCTGGAGGTTGGCTTGAAAGGACAACCGTCGAGGATATGGATATAGCTGTTCGGGC 1663
||||||||| ||||||||||||||||| || || ||||||||||| ||||| || || ||
Sbjct 1439 GGAATCTGGTGGTTGGCTTGAAAGGACCACTGTGGAGGATATGGACATAGCAGTCCGCGC 1498
Query 1664 TCATCTTCATGGATGGAAATTCATATATCTTAACGATGTCAAGGTTCTTTGTGAAGTTCC 1723
|||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||
Sbjct 1499 TCATCTTCATGGATGGAAGTTCATATATCTTAATGATGTCAAGGTCCTTTGCGAAGTTCC 1558
Query 1724 TGAGTCATATGAAGCATACAAGAAGCAGCAACATCGATGGCACTCGGGACCAATGCAGCT 1783
|||||| || |||||||| |||||||||||||| || ||||| |||||||| ||||||||
Sbjct 1559 TGAGTCCTACGAAGCATATAAGAAGCAGCAACACCGTTGGCATTCGGGACCTATGCAGCT 1618
Query 1784 ATTTC-GCTTGTGTCT-GCGATCAATCTTGACCTCTAAGATTGCAATGTGGAAGAAAGCA 1841
|||| |||||||||| | | |||||||||||||||||||| || || |||||||| ||
Sbjct 1619 -TTTCCGCTTGTGTCTTG-GTTCAATCTTGACCTCTAAGATAGCCATATGGAAGAAGGCG 1676
Query 1842 AATCTGATACTACTATTCTTCCTTCTAAGGAAACTCATACTTCCTTTCTACTCCTTCACA 1901
||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1677 AATCTGATACTTCTATTCTTTCTTCTTAGGAAACTCATACTTCCTTTCTACTCCTTCACG 1736
Query 1902 TTGTTCTGTGTAATCCTTCCAATCACCATGTTCGTTCCAGAAGCCGAGCTTCCTATTTGG 1961
|||||||| ||||||||||| |||||||||| ||||||||||| ||||| ||| |||||
Sbjct 1737 TTGTTCTGCATAATCCTTCCACTCACCATGTTTGTTCCAGAAGCTGAGCTCCCTGTTTGG 1796
Query 1962 GTCATCTGCTATGTACCGATATTCATGTCACTACTCAACATTCTTCC-TGCTCCAAAGTC 2020
||||||||||| ||||| | |||||||| | |||||| ||||||| | ||||||| ||
Sbjct 1797 GTCATCTGCTACATACCGGTTTTCATGTCTTTCCTCAACCTTCTTCCAT-CTCCAAAATC 1855
Query 2021 -TTTCCCTTTCATTGTCCCTTACCTATTGTTTGAGAACACTATGTCGGTCACCAAGTTCA 2079
||||| ||||||||| ||||| || ||||| |||||||| ||||| |||||||||||||
Sbjct 1856 GTTTCC-TTTCATTGTTCCTTATCTCTTGTTCGAGAACACAATGTCTGTCACCAAGTTCA 1914
Query 2080 ACGCGATGGTATCTGGATTATTCCAACTCGGTAGCTCTTACGAATGGATTGTAACAAAGA 2139
|||||||||| || |||||||||||| | |||||||||||||| |||||||| |||||||
Sbjct 1915 ACGCGATGGTGTCCGGATTATTCCAATTGGGTAGCTCTTACGAGTGGATTGTCACAAAGA 1974
Query 2140 AAGCAGGAAGATCATCAGAGTCTGATCTTTTAGCTCTCACTGATAAAGA-AT-CCGAGAA 2197
|||| ||||||||||| ||||| ||||||||| || |||| || ||||| || || | ||
Sbjct 1975 AAGCTGGAAGATCATCCGAGTCAGATCTTTTATCTATCACCGAGAAAGAGATACC-A-AA 2032
Query 2198 GATGCCAAAC-CAAATCCTAAGAGGAGTTTCAGACAGTGAGCTCTTGGAGATAAGCCAAG 2256
| | ||| ||| | || || |||||||| ||||| ||||| |||||| | ||||||
Sbjct 2033 CAAGA-AAAGTCAATTGCTTAGGGGAGTTTCCGACAGCGAGCTTTTGGAGCTGAGCCAAC 2091
Query 2257 TTGAGGAACAGAAAAAACAACCGGTTTC-------C--GTGAAGAAAACCAATAAGATAT 2307
|||| ||||||||| || ||||||| | || ||||||||||| |||||||
Sbjct 2092 TTGAAGAACAGAAA---CATGCGGTTTCAAAGAAACCCGTCAAGAAAACCAACAAGATAT 2148
Query 2308 TCCACAAAGAGCTCGCGCTAGCTTTTCTTTTGCTCACTGCAGCAG-TTAGGAGTCTTTTG 2366
||||||||||||||| | || |||||||||||||||||||| | |||||||||| |||
Sbjct 2149 ACCACAAAGAGCTCGCATTGGCCTTTCTTTTGCTCACTGCAGC-GCTTAGGAGTCTCTTG 2207
Query 2367 GCCTCACAAGGAGTACATTTCTACTTCCTATTGTTCCAAGGTCTCACCTTTCTTCTTGTG 2426
|| | |||||||| |||||||||||||| || ||||||||| |||||||||||||||||
Sbjct 2208 GCAGCTCAAGGAGTGCATTTCTACTTCCTGTTATTCCAAGGTGTCACCTTTCTTCTTGTG 2267
Query 2427 GGTCTCGATCTCATAGGGGAGCAGATGAGTTAAGAAA 2463
||||||||||||||||| ||||||||||| | |||||
Sbjct 2268 GGTCTCGATCTCATAGGCGAGCAGATGAGCTGAGAAA 2304
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 102386578560
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5