BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G25170.1 Length=4402 Score E Sequences producing significant alignments: (Bits) Value Ahg344116 jgi|Araly1|344116|fgenesh1_pg.C_scaffold_4000458 3644 0.0 Ahg328538 jgi|Araly1|328538|fgenesh1_pm.C_scaffold_7000765 1110 0.0 > Ahg344116 jgi|Araly1|344116|fgenesh1_pg.C_scaffold_4000458 Length=4200 Score = 3644 bits (1973), Expect = 0.0 Identities = 2195/2304 (95%), Gaps = 8/2304 (0%) Strand=Plus/Plus Query 1880 AGTTTCAGCATATGCTGGACT-TACTTGAAGACTACTGTACCCATAAGAAATGGCAGTAC 1938 |||||||||| |||||||| | ||||||||||||||||| | ||||||||||| | ||| Sbjct 1901 AGTTTCAGCACATGCTGGA-TCTACTTGAAGACTACTGTTCTTATAAGAAATGGAACTAC 1959 Query 1939 GAGCGAATTGATGGAAAGGTTGGCGGAGCTGAGCGGCAAATACGCATAGATCGGTTCAAT 1998 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1960 GAGCGAATTGATGGAAAGGTTGGCGGAGCTGAGCGGCAAATACGCATAGATCGGTTCAAT 2019 Query 1999 GCCAAAAATTCTAACAAGTTTTGTTTTTTGCTCTCCACAAGAGCTGGTGGCTTAGGAATA 2058 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2020 GCCAAAAACTCTAACAAATTTTGTTTTTTGCTCTCCACAAGAGCTGGTGGCTTAGGAATA 2079 Query 2059 AATCTTGCAACGGCTGATACAGTAATCATTTATGACAGTGACTGGAATCCTCATGCTGAT 2118 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2080 AATCTTGCAACGGCTGATACAGTAATAATTTATGACAGTGACTGGAATCCTCATGCTGAT 2139 Query 2119 CTTCAAGCAATGGCTAGAGCTCATCGACTTGGCCAAACAAATAAGGTGATGATTTATAGG 2178 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2140 CTTCAGGCAATGGCTAGAGCTCATCGACTTGGCCAAACAAATAAGGTGATGATTTACCGA 2199 Query 2179 CTCATAAACCGAGGCACCATTGAAGAAAGGATGATGCAATTGACTAAAAAGAAAATGGTT 2238 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2200 CTCATAAACCGAGGCACCATTGAAGAAAGGATGATGCAATTAACTAAAAAGAAAATGGTT 2259 Query 2239 CTAGAGCATCTTGTTGTTGGGAAACTCAAAACACAAAACATTAATCAGGAAGAGTTAGAT 2298 |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| Sbjct 2260 CTAGAGCATCTTGTCGTCGGGAAACTAAAAACACAAAACATTAATCAGGAAGAGTTAGAT 2319 Query 2299 GACATCATCAGGTATGGATCAAAGGAGCTTTTTGCTAGTGAAGATGATGAAGCAGGAAAG 2358 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2320 GACATCATCAGGTATGGATCAAAGGAGCTTTTTGCTAGTGAAGATGACGAAGCAGGAAAG 2379 Query 2359 TCTGGAAAAATTCATTATGATGATGCGGCTATAGACAAATTGCTTGATCGTGATCTCGTG 2418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2380 TCTGGAAAAATTCATTATGATGATGCGGCTATAGACAAATTGCTTGATCGTGATCTCGTG 2439 Query 2419 GAGGCAGAGGAAGTCTCAGTGGATGATGAAGAGGAGAATGGATTCTTAAAGGCTTTCAAG 2478 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2440 GAGGCTGAGGAGGTCTCAGTGGATGATGAAGAGGAGAATGGATTCTTAAAGGCTTTCAAG 2499 Query 2479 GTGGCTAATTTTGAATATATAGATGAAAATGAGGCAGCAGCATTAGAGGCACAGAGAGTC 2538 ||||| |||||||| ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 2500 GTGGCAAATTTTGAGTATATTGATGAAAACGAGGCAGCAGCATTAGAGGCACAGAGAGTC 2559 Query 2539 GCTGCTGAAAGCAAATCTTCAGCAGGCAATTCTGATAGAGCAAGTTATTGGGAAGAGTTG 2598 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2560 GCTGCTGAAAGCAAATCTTCAGCAGGCAGTTCTGATAGAGCAAGTTATTGGGAAGAGTTG 2619 Query 2599 TTAAAAGATAAATTTGAGCTGCACCAGGCTGAGGAGCTTAATGCTCTTGGAAAAAGGAAG 2658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2620 TTAAAAGATAAATTTGAGCTGCACCAGGCTGAGGAGCTTAATGCTCTTGGAAAAAGGAAG 2679 Query 2659 AGAAGTCGCAAGCAGTTGGTATCCATTGAAGAAGATGATCTTGCTGGTTTGGAAGATGTG 2718 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2680 AGAAGTCGCAAGCAGTTGGTATCCATTAAAGAAGATGATCTTGCTGGTTTGGAAGATGTG 2739 Query 2719 AGCTCTGATGGAGATGAAAGTTATGAAGCTGAGTCAACAGATGGTGAAGCAGCAGGACAA 2778 ||||||||||||||||||||||||||||| ||||||||||||| |||| |||| |||||| Sbjct 2740 AGCTCTGATGGAGATGAAAGTTATGAAGCCGAGTCAACAGATGCTGAAACAGCGGGACAA 2799 Query 2779 GGAGTTCAGACGGGTCGACGGCCGTACAGAAGAAAGGGTCGCGATAATTTGGAACCAACT 2838 | ||||||||||||||||||||| || |||||||||||||||||||| | ||| |||| | Sbjct 2800 GAAGTTCAGACGGGTCGACGGCCATATAGAAGAAAGGGTCGCGATAACTCGGAGCCAATT 2859 Query 2839 CCGTTGATGGAAGGTGAGGGGAGATCTTTCAGAGTACTGGGTTTCAACCAGAGTCAAAGG 2898 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2860 CCTTTGATGGAAGGCGAGGGGAGATCTTTCAGAGTACTGGGTTTCAACCAGAGTCAAAGG 2919 Query 2899 GCCATTTTTGTACAGACTTTGATGAGGTATGGAGCTGGCAATTTTGATTGGAAGGAGTTT 2958 ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct 2920 GCCATTTTTGTACAGACGTTGATGAGGTATGGAGCTGGTAATTTCGATTGGAAGGAGTTT 2979 Query 2959 GTTCCTCGCTTAAAGCAGAAGACCTTTGAAGAAATAAATGAATATGGAATACTCTTCTTG 3018 ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 2980 GTTCCTCGCTTAAAGCAGAAGACCTATGACGAAATAAATGAATATGGAATACTCTTCTTG 3039 Query 3019 AAGCACATTGCTGAAGAAATAGACGAGAATTCTCCAACCTTTTCAGATGGTGTGCCCAAG 3078 ||||||||||||||||| || |||||||| |||||||| ||||||||||||||||| ||| Sbjct 3040 AAGCACATTGCTGAAGATATTGACGAGAACTCTCCAACATTTTCAGATGGTGTGCCAAAG 3099 Query 3079 GAAGGACTTAGAATAGAAGATGTTCTAGTCAGAATTGCTCTTCTGATACTAGTTCAGGAG 3138 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 3100 GAAGGACTTAGAATAGAAGATGTTCTAGTCAGAATTGCTCTTCTGATACTAGTACAGGAG 3159 Query 3139 AAGGTGAAATTTGTAGAAGATCATCCAGGGAAACCTGTTTTCCCCTCTCGCATTCTTGAA 3198 ||| ||||||||||||||||||||||| ||||||||||||| | || |||||||||||| Sbjct 3160 AAGACGAAATTTGTAGAAGATCATCCAGCGAAACCTGTTTTCACGTCCCGCATTCTTGAA 3219 Query 3199 AGATTCCCCGGACTGAGAAGTGGAAAAATTTGGAAGGAGGAACATGACAAGATAATGATA 3258 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 3220 AGATTCCCCGGATTGAGAAGTGGAAAAGTTTGGAAGGAGGAACATGACAAGATAATGATA 3279 Query 3259 CGTGCTGTTTTAAAGCATGGGTACGGACGGTGGCAAGCTATTGTTGATGACAAAGAGTTG 3318 ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| Sbjct 3280 CGTGCTGTTTTAAAGCATGGGTATGGGCGATGGCAAGCTATTGTTGATGACAAAGAGTTA 3339 Query 3319 GGGATCCAAGAGCTTATCTGCAAAGAATTGAATTTCCCTCACATAAGTTTGTCTGCTGCT 3378 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 3340 GGGATCCAAGAGCTTATCTGCAAGGAATTGAACTTCCCTCACATAAGTTTGTCTGCTGCT 3399 Query 3379 GAACAAGCTGGTTTGCAGGGGCAGAATGGTAGTGGGGGCTCTAATCCGGGAGCACAGACT 3438 ||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 3400 GAACAAGCTGGCTTGCAGGGGCAGAATGGTAGTGGGGGCTCCAATTTGGGAGCACAGACT 3459 Query 3439 AACCAGAATCCTGGAAGCGTTATTACTGGGAACAATAATGCTTCTGCTGATGGGGCTC-A 3497 ||||||||| ||||||| | |||||||||||||||||||||||||| |||||||| || | Sbjct 3460 AACCAGAATTCTGGAAGTGGTATTACTGGGAACAATAATGCTTCTGGTGATGGGG-TCCA 3518 Query 3498 AGTAAACTCGATGTTCTATTATCGGGACATGCAGAGACGACTTGTTGAGTTTGTGAAAAA 3557 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 3519 AGTAAACTCGATGTTCTACTATCGGGACATGCAGAGACGACTTGTTGAGTTTGTGAAAAA 3578 Query 3558 GCGAGTTCTGCTTTTGGAGAAGGCGATGAATTATGAATACGCAGAGGAATATTATGGACT 3617 ||||||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||| Sbjct 3579 GCGAGTTCTGCTTTTGGAGAAAGCGTTGAATTATGAATATGCAGAGGATTATTATGGACT 3638 Query 3618 TGGTGGCTCATCATCTATCCCTACTGAAGAACCAGAAGCTGAACCAAAGATCGCTGACAC 3677 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3639 TGGTGGCTCGTCATCTATCCCTACTGAAGAACCAGAAGCTGAACCAAAGATCGCTGACAC 3698 Query 3678 AGTGGGAGTGAGCTTTATTGAGGTTGATGATGAAATGCTTGATGGACTTCCTAAGACTGA 3737 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 3699 AGTGGGAGTGAGCTTTATTGAGGTCGATGATGAAATGCTTGATGGACTTCCTAAGACTGA 3758 Query 3738 TCCTATCACTTCAGAAGAAATTATGGGGGCTGCTGTTGACAACAACCAAGCGCGGGTCGA 3797 ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 3759 TCCCATCACTTCAGAAGAAATTATGGTGGCTGCTGTTGACAACAACCAAGCGCGGGTCGA 3818 Query 3798 AATAGCTCAACATTATAACCAGATGTGCAAACTTCTTGATGAGAACGCTCGGGAATCAGT 3857 ||||||||| ||||||||||||||||||||| || || ||||||||||||| |||||| | Sbjct 3819 AATAGCTCAGCATTATAACCAGATGTGCAAAGTTTTTAATGAGAACGCTCGTGAATCACT 3878 Query 3858 CCAAGCATATGTAAACAACCAACCACCGAGTACCAAGGTGAATGAGAGCTTCCGTGCACT 3917 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 3879 CCAAGCATATGTAAACAACCAACCACCAAGTACCAAGGTGAATGAGAGCTTCCGTGCACT 3938 Query 3918 CAAATCTATCAATGGTAACATTA-ACACAATCCTTTCGATTACATCT-GATCAATCCAAG 3975 | ||||||||||||||||||||| | || |||||||||| | || || || ||||| ||| Sbjct 3939 CGAATCTATCAATGGTAACATTAGA-ACGATCCTTTCGACTCCA-CTTGACCAATCAAAG 3996 Query 3976 TCACATGAAGACGACACCAAGCCAGACCTAAACAATGTTGAGATGAAGGACACGGCCGAA 4035 ||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct 3997 TCACATGAAAACGACACCAAGCCAAACCTAAACAATGTTGACATGAAGGACACGGCCGAA 4056 Query 4036 GAAACAAAACCGTTAAGAGGTGGCGTCGTCGATCTGAATGTGGTGGAGGGAGAGGAGAAC 4095 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 4057 GAAACAAAACCGTTAAGAGGTGGCGTCGTCGATCTGAATGTGATGGAGGGAGAGGAGAAC 4116 Query 4096 ATTGCTGAAGCTAGTGGAAGTGTTGATGTAAAAATGGAAGAAGCCAAAGAAGAAGAGAAG 4155 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 4117 ATTTCTGAAGCTAGTGGAAGTGTTGATGTGAAAATGGAAGAAGCCAAAGAAGAAGAGAAG 4176 Query 4156 CCAAAGAACATGGTCGTTGATTGA 4179 ||||||||||||||||| |||||| Sbjct 4177 CCAAAGAACATGGTCGTGGATTGA 4200 Score = 3186 bits (1725), Expect = 0.0 Identities = 1844/1903 (97%), Gaps = 2/1903 (0%) Strand=Plus/Plus Query 25 ATGAGTAGTTTGGTGGAGAGGCTTCGCATACGATCTGATAGGAAACCAGTTTATAACCTA 84 |||||||||||||||||| ||||||| |||||||| ||||||||||| |||||||| ||| Sbjct 1 ATGAGTAGTTTGGTGGAGCGGCTTCGTATACGATCAGATAGGAAACCGGTTTATAATCTA 60 Query 85 GATGATTCTGATGATGACGACTTCGTTCCTAAAAAAGATCGAACCTTTGAGCAAGTCGAG 144 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 61 GATGATTCTGATGATGACGACTTCGTTCCTAAAAAAGATCGGACCTTGGAGCAAGTCGAG 120 Query 145 GCTATTGTCAGAACTGATGCGAAAGAAAATGCATGTCAGGCTTGTGGGGAAAGTACTAAT 204 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | ||| Sbjct 121 GCTATTGTCAGAACTGATGCGAAAGAAAATGCATGCCAGGCTTGTGGAGAAAGTGCAAAT 180 Query 205 CTTGTAAGCTGCAATACATGCACTTATGCGTTCCATGCTAAATGCTTAGTTCCACCTCTT 264 |||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| Sbjct 181 CTTGTAAGCTGCAATACATGTACGTATGCGTTCCATGCTAAATGCTTAGTTCCGCCTCTT 240 Query 265 AAAGATGCTTCCGTGGAAAATTGGAGATGCCCTGAATGTGTTAGTCCTCTTAACGAGATA 324 ||||| || || |||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 241 AAAGACGCGTCAGTGGAAAATTGGAGATGCCCTGAATGCGTTAGTCCTCTTAATGAGATA 300 Query 325 GATAAGATATTGGATTGTGAAATGCGTCCTACAAAATCTAGTGAACAAGGTTCCTCCGAT 384 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GATAAGATATTGGACTGTGAAATGCGTCCTACAAAATCTAGTGAACAAGGTTCCTCCGAT 360 Query 385 GCGGAACCGAAGCCAATTTTTGTGAAACAGTATCTCGTGAAGTGGAAGGGATTATCATAC 444 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GCGGCACCAAAGCCAATTTTTGTGAAACAGTATCTCGTGAAGTGGAAGGGATTATCATAC 420 Query 445 CTTCACTGCTCTTGGGTGCCTGAGAAGGAGTTCCAGAAGGCTTATAAGTCAAATCATCGT 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 CTTCACTGCTCTTGGGTGCCTGAGAAGGAGTTCCAGAAGGCTTATAAGTCAAATCATCGT 480 Query 505 TTAAAAACCAGAGTGAACAATTTTCACCGTCAAATGGAGTCAT-TCAATAACAGCGAAGA 563 ||||||||||| |||||||||||||||||||||||||| || | |||||||||||||||| Sbjct 481 TTAAAAACCAGGGTGAACAATTTTCACCGTCAAATGGAATC-TGTCAATAACAGCGAAGA 539 Query 564 TGATTTTGTTGCCATACGTCCTGAGTGGACCACTGTTGATCGGATTCTTGCCTGCAGAGA 623 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 TGATTTTGTTGCCATTCGTCCTGAGTGGACCACTGTTGATCGGATTCTTGCCTGCAGAGA 599 Query 624 GGAAGATGGGGAGCTGGAATATCTTGTCAAATATAAAGAGCTATCCTATGATGAATGTTA 683 ||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 600 GGAAGATGGTGAGCTGGAATATCTTGTGAAATATAAAGAGCTATCTTATGATGAATGTTA 659 Query 684 TTGGGAGTCAGAATCAGACATCTCAACCTTCCAGAATGAAATTCAAAGGTTCAAGGATGT 743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 TTGGGAGTCAGAATCAGACATCTCAACCTTCCAGAATGAAATTCAAAGGTTCAAGGATGT 719 Query 744 AAATTCTAGAACTCGCAGAAGTAAAGATGTTGACCATAAAAGAAATCCCAGAGACTTTCA 803 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 720 AAATTCTAGAACTCGCAGGGGTAAAGATGTTGACCATAAAAGAAATCCCAGAGACTTTCA 779 Query 804 ACAGTTTGATCATACTCCTGAATTCCTCAAAGGCTTGTTACATCCATACCAGCTTGAGGG 863 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 780 ACAGTTTGATCATACTCCTGAATTCCTCAAAGGCTTGTTGCATCCATACCAGCTTGAGGG 839 Query 864 ACTTAATTTTTTGCGGTTCTCGTGGTCAAAACAGACGCATGTAATCCTTGCTGATGAAAT 923 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 ACTTAATTTTTTGCGGTTCTCGTGGTCAAAACAGACGCATGTAATCCTTGCTGATGAAAT 899 Query 924 GGGACTAGGCAAGACAATTCAAAGCATTGCCCTTTTAGCTTCACTTTTTGAGGAGAACCT 983 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 900 GGGACTAGGCAAAACAATTCAAAGCATTGCCCTTTTAGCTTCACTTTTTGAGGAGAACCT 959 Query 984 CATTCCGCATTTGGTAATTGCTCCTCTATCGACTCTGCGTAACTGGGAGAGAGAGTTTGC 1043 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 960 CATTCCGCATTTGGTAATTGCTCCTCTATCGACTCTGCGTAACTGGGAGAGAGAGTTTGC 1019 Query 1044 CACATGGGCCCCACAGATGAACGTGGTTATGTATTTTGGCACTGCGCAAGCTCGAGCAGT 1103 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 1020 CACATGGGCCCCACAGATGAATGTGGTTATGTATTTTGGCACTTCGCAAGCTCGAGCAGT 1079 Query 1104 TATCAGAGAACATGAGTTTTACTTATCgaaagatcaaaaaaagatcaagaaaaagaaatc 1163 |||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||| Sbjct 1080 TATCAGAGAACATGAGTTTTACTTTTCGAAAGATAAAAAAAAAATCAAGAAAAAGAAATC 1139 Query 1164 tggacaaataagtagcgaaagcaagcaaaaaagaatcaagTTTGATGTCCTCCTCACATC 1223 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1140 TGGACAAATCAGTAGCGAAAGCAAGCAAAAAAGAATCAAGTTTGACGTCCTCCTCACATC 1199 Query 1224 GTATGAGATGATCAACCTAGATTCAGCAGTTCTAAAACCAATTAAGTGGGAGTGCATGAT 1283 |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct 1200 GTATGAGATGATCAACCTAGATACAGCAGTTCTGAAACCAATTAAGTGGGAGTGCATGAT 1259 Query 1284 TGTTGATGAAGGTCATCGACTGAAAAATAAGGATTCAAAGCTGTTCTCTTCATTGACACA 1343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1260 TGTTGATGAAGGTCATCGACTGAAAAATAAGGATTCAAAGCTGTTCTCTTCATTGACACA 1319 Query 1344 GTATTCAAGTAACCACCGTATTCTTCTGACAGGAACACCACTTCAGAACAACTTGGATGA 1403 ||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1320 GTATTTAAGTAATCATCGTATTCTTCTGACAGGAACACCACTTCAGAACAACTTGGATGA 1379 Query 1404 ACTTTTCATGCTCATGCATTTTCTTGATGCGGGGAAGTTTGGAAGTTTGGAGGAGTTCCA 1463 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1380 ACTTTTCATGCTAATGCATTTTCTTGATGCGGGGAAGTTTGGAAGTTTGGAGGAGTTCCA 1439 Query 1464 GGAGGAGTTCAAAGATATTAATCAAGAGGAGCAGATCTCAAGGTTGCACAAAATGTTGGC 1523 |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 1440 GGAGGAGTTCAAAGATATTAATCAAGAGGAACAGATCTCAAGATTGCACAAAATGTTGGC 1499 Query 1524 TCCACATTTGCTCAGAAGGGTaaaaaaaGACGTAATGAAAGACATGCCCCCCAAAAAGGA 1583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1500 TCCACATTTGCTCAGAAGGGTAAAAAAAGACGTAATGAAAGACATGCCCCCCAAAAAGGA 1559 Query 1584 GCTCATTTTGCGTGTTGATCTGAGCAGTCTGCAGAAAGAATATTACAAAGCTATTTTTAC 1643 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1560 ACTCATTTTGCGTGTTGATCTGAGCAGCCTGCAGAAAGAATATTACAAAGCTATTTTTAC 1619 Query 1644 CCGTAATTATCAAGTATTGACAAAAAAGGGAGGTGCTCAAATTTCCCTTAATAACATTAT 1703 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1620 CCGTAATTATCAAGTATTGACTAAAAAGGGAGGTGCTCAAATTTCCCTTAATAACATTAT 1679 Query 1704 GATGGAATTACGAAAAGTATGCTGCCATCCTTATATGCTAGAGGGTGTTGAGCCAGTTAT 1763 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct 1680 GATGGAATTACGAAAAGTATGCTGCCATCCTTATATGCTGGAGGGTGTTGAGCCAGCTAT 1739 Query 1764 TCACGACGCAAATGAAGCTTTCAAACAACTTTTGGAGTCTTGTGGAAAGCTGCAACTTCT 1823 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1740 TCACGACGCTAATGAAGCTTTCAAACAACTTTTGGAATCTTGTGGAAAGCTGCAACTTCT 1799 Query 1824 AGATAAAATGATGGTCAAACTGAAAGAGCAAGGACACAGAGTCCTAATATACACACAGTT 1883 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1800 AGATAAAATGATGGTCAAACTGAAAGAGCAAGGACACAGAGTCCTAATATACACACAGTT 1859 Query 1884 TCAGCATATGCTGGACTTACTTGAAGACTACTGTACCCATAAG 1926 |||||| ||||||||||||||||||||||||||| || ||||| Sbjct 1860 TCAGCACATGCTGGACTTACTTGAAGACTACTGTTCCTATAAG 1902 > Ahg328538 jgi|Araly1|328538|fgenesh1_pm.C_scaffold_7000765 Length=3666 Score = 1110 bits (601), Expect = 0.0 Identities = 1268/1576 (80%), Gaps = 102/1576 (6%) Strand=Plus/Plus Query 1197 aatcaagTTTGATGTCCTCCTCACATCGTATGAGATGATCAACCTAGATTCAGCAGTTCT 1256 ||| |||||||||||||||||||| || ||||||||||| |||| ||| || ||||||| Sbjct 969 AATTAAGTTTGATGTCCTCCTCACGTCATATGAGATGATTAACCAAGACACATCAGTTCT 1028 Query 1257 AAAACCAATTAAGTGGGA-GTGCATGATTGTTGATGAAGGTCATCGACTGAAAAATAAGG 1315 |||||||| |||| ||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 1029 GAAACCAATCAAGT-GGACGTGCATGATTGTTGATGAAGGCCATCGGTTGAAAAATAAGG 1087 Query 1316 ATTCAAAGCTGTTCTCTTCATTGACA-CAGTATT-CAAGTAACCACCGTATTCT-TCTGA 1372 |||||||||| | ||||||||||| | |||| || | ||||| || || |||| | ||| Sbjct 1088 ATTCAAAGCTATACTCTTCATTGA-ATCAGT-TTACGAGTAAGCATCGCGTTCTGT-TGA 1144 Query 1373 CAGGAACACCACTTCAGAACAACTTGGATGAACTTTTCATGCTCATGCATTTTCTTGATG 1432 | |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 1145 CCGGAACACCACTTCAGAACAACTTGGATGAACTTTTCGTTCTCATGCATTTTCTTGATG 1204 Query 1433 CGGGGAAGTTTG-GAAGTTTGGAGGAGTTCCAGGAGGAGTTCAAAGATATTAATCAAGAG 1491 | | ||||||| || || ||||| | || || ||||||| || ||||| ||||||||| Sbjct 1205 CCGTCAAGTTTGCGA-GTATGGAGAACTTTCAAAAGGAGTTTAAGGATATAAATCAAGAG 1263 Query 1492 GAGCAGATCTCAAGGTTGCACAAAATGTTGGCTCCACATTTGCTCAGAAGGGTaaaaaaa 1551 ||||||| ||||| | ||| ||||||||||||||||| |||| |||||| |||| ||| Sbjct 1264 AAGCAGATTTCAAGACTCCACCAAATGTTGGCTCCACATCTGCTTAGAAGGTTAAAGAAA 1323 Query 1552 GACGT----AATGA-AAGACATGCCCCCCAAA-AAGGAGCTCATTTTGCGTGTTGATCTG 1605 ||||| || || |||| ||||||| ||| ||||||||||||||||||||||||||| Sbjct 1324 GACGTGCTCAAGGATAAGA--TGCCCCC-AAAGAAGGAGCTCATTTTGCGTGTTGATCTG 1380 Query 1606 AGCAGTCTGCAGAAAGAA-TATTACAAAGCTATTTTTACCCGTAATTATCAAGTATTGAC 1664 ||||| | ||| |||||| | | |||||||| || ||||| |||||||||||| ||||| Sbjct 1381 AGCAGCCAGCAAAAAGAAGTGT-ACAAAGCTGTTATTACCAATAATTATCAAGTCTTGAC 1439 Query 1665 AAA-AAAGGGAGGTGCTCAAATTTCCCTTAATAACATTATGATGGAAT-TACGAAAAGTA 1722 ||| ||| | ||||||| |||| || | || | | | ||||| | |||| ||||| Sbjct 1440 AAAGAAACG-AGGTGCTAAAATATC--T-AA---CGTGCTAATGGA-TCTACGCAAAGTT 1491 Query 1723 TGCTGC-CATCCTTATATGCTAGAGGGTGTTGAGCCA-GTTATTCACGACGCAAATGAAG 1780 |||| | ||||| ||| || || | | ||||||||| | || | ||||||||||||| Sbjct 1492 TGCT-CTCATCCGTATCTGTTAAAAGACGTTGAGCCAAGAC-TTGAAGACGCAAATGAAG 1549 Query 1781 CTTTCA-AACAACTTTTGGA-GTCTTGTGGAAAGCTGCAACTTCT-AGATAAAATGATGG 1837 |||| | || |||| ||||| | ||| ||||||| ||||| || | ||| |||||||||| Sbjct 1550 CTTTTACAA-AACTCTTGGAAG-CTTCTGGAAAGTTGCAA-TTGTTAGACAAAATGATGG 1606 Query 1838 TCAAACTGAAAGAGCAAGGACACAGAGTCCTAATATACACACAGTTTCAGCATATGCTGG 1897 ||||||| ||||| || || |||||||| ||||| || |||| || || || | ||| | Sbjct 1607 TCAAACTCAAAGAACAGGGGCACAGAGTGCTAATCTATTCACAATTCCAACACACGCTTG 1666 Query 1898 AC-TTACTTG-AAGACTACTGTACCCAT-AAGAAATGGCAGTACGAGCGAATTGATGGAA 1954 || || || |||| ||||| | | |||| ||| | || || || |||||||||| Sbjct 1667 ACCTT--TTCCAAGATTACTGCAGTT-TCAAGAGTTGGAAATATGAACGGATTGATGGAA 1723 Query 1955 AGGTTGGCGGAGCTGAGCGGCAAATACGCATAGATCGGTTCAATGCCA-AAAATTCTAAC 2013 |||| || ||||||||| ||||| | ||||||||||||| ||||| | |||| |||||| Sbjct 1724 AGGTCGGTGGAGCTGAGAGGCAAGCAAGCATAGATCGGTTTAATGC-AGAAAAGTCTAAC 1782 Query 2014 AAGTTTTGTTTTTTGCTCTCCACAAGAGCTGGTGGCTTAGGAATAAATCTTGCAACGGCT 2073 ||| |||||||||||| | |||||||||||||| |||||||||| |||||||| ||| Sbjct 1783 CGGTTCTGTTTTTTGCTCACTACAAGAGCTGGTGGAATAGGAATAAACCTTGCAACAGCT 1842 Query 2074 GATACAGTAATCATTTATGACAGTGACTGGAATCCTCATGCTGATCTTCAAGCAATGGCT 2133 |||||||| ||||||||||||||||| |||||||||||||||||||| || || |||||| Sbjct 1843 GATACAGTCATCATTTATGACAGTGATTGGAATCCTCATGCTGATCTCCAGGCTATGGCT 1902 Query 2134 AGAGCTCATCGACTTGGCCAAACAAATAAGGTGATGATTTATAGGCTCATAAACCGAGGC 2193 ||||||||||| |||||||||||||||||||| |||||||| |||||||| |||||| | Sbjct 1903 AGAGCTCATCGTCTTGGCCAAACAAATAAGGTCATGATTTACAGGCTCATTCACCGAG-C 1961 Query 2194 -ACCATTGAAGAAAGGATGATGCA-ATTGACTAAAAAGAAAATGGTTCTAGAGCATCTTG 2251 || | ||||| ||||| || | ||| ||||| ||||| ||| ||||||||||||| | Sbjct 1962 TACGGTGGAAGAGCGGATGGTGGAGATT-ACTAAGAAGAAGATGCTTCTAGAGCATCTCG 2020 Query 2252 TTGTTGGGAA-ACTC-AAAACACAAAACATTAATCAGGAAGAGTTAGATGACATCATCAG 2309 | || ||||| | | ||||| || | | || ||||| | ||||||||||||||||| Sbjct 2021 TAGTGGGGAATA-TGGAAAACCCACATC-TTCGGCAGGACGTGTTAGATGACATCATCAA 2078 Query 2310 GTATGGATCAAAGGAGCTTTT-TGCT-A-GTGAAGATGATGAAGCAGGAAAGTCTGGAAA 2366 ||||| || ||||||||||| | || | | ||| |||||||||||| ||||||||||| Sbjct 2079 ATATGGTTCCAAGGAGCTTTTCT-CTGAAGAGAA--TGATGAAGCAGGGAAGTCTGGAAA 2135 Query 2367 AATTCATTATGATGATGCGGCTATAGACAAA-TTGCTTGATCGTGATC-TCGTGGAGGC- 2423 ||| |||||||||||||| ||||| || ||| |||||||| ||||||| | || || || Sbjct 2136 AATCCATTATGATGATGCTGCTATTGA-AAAGTTGCTTGACCGTGATCAT-GTAGATGCT 2193 Query 2424 AGAGGAAGTCTCAGTGGATGATGAAGAGGAGAATGGATTCTTAAAGGCTTTCAAGGTGGC 2483 | |||| |||||| |||||||||| ||||| ||||| || |||||| |||||||||||| Sbjct 2194 A-AGGAGGTCTCACTGGATGATGAGGAGGATAATGGTTTTTTAAAGAATTTCAAGGTGGC 2252 Query 2484 TAATTTTGAA-TATATAGATGAAAATGAGGCAGCAGCATTAGAGGCA--CAGAGAGTCGC 2540 | |||| || ||||||||||| |||||||| ||||||| ||||| | || | || | Sbjct 2253 CACTTTT-AAGTATATAGATGACAATGAGGCTGCAGCATCAGAGG-AGGCACA-AG-CTA 2308 Query 2541 TGCTGAAAGCAAATCTTCAGCAGGCAATTCTGATAGAGCAAGTTATTGGGAAGAGTTGTT 2600 | ||||| ||| ||||||| | | || | ||||| ||||| |||||||| | Sbjct 2309 T--TGAAAACAATTCTTCAG-AT--A-----GA-A---CAAGTCATTGGAAAGAGTTGCT 2354 Query 2601 AAAAGATAAATTTGA-GCTGCACCAGGCTGAGGAGCTTAATGCTCTTGGAAAAAGGAAGA 2659 |||||| |||| ||| | |||| || || || ||||| |||||||||||||| |||||| Sbjct 2355 AAAAGACAAATATGAAG-TGCAACAAGCCGAAGAGCTCAATGCTCTTGGAAAGAGGAAGC 2413 Query 2660 GAAGTCG-CAAGCAGTTG--GTATCCATTGAAGAAGATGATCTTGCTGGTTTGGAAGATG 2716 ||| || ||||||| || |||| | | |||||||||||||||| |||||| |||| || Sbjct 2414 GAAA-CGGCAAGCAGGTGATGTATGC-T-GAAGAAGATGATCTTGATGGTTTAGAAG-TG 2469 Query 2717 TGAGCTCTGATGGAGA 2732 | |||||||| ||| Sbjct 2470 --ACCTCTGATG-AGA 2482 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 166501881875 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5