BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G25440.1
Length=2016
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481397 jgi|Araly1|481397|fgenesh2_kg.4__457__AT2G25440.1 2846 0.0
Ahg482244 jgi|Araly1|482244|fgenesh2_kg.4__1304__AT2G33060.1 828 0.0
Ahg497402 jgi|Araly1|497402|fgenesh2_kg.348__3__AT2G33060.1 556 2e-157
Ahg480073 jgi|Araly1|480073|fgenesh2_kg.3__2774__AT3G24982.1 274 2e-72
> Ahg481397 jgi|Araly1|481397|fgenesh2_kg.4__457__AT2G25440.1
Length=2019
Score = 2846 bits (1541), Expect = 0.0
Identities = 1855/2006 (92%), Gaps = 24/2006 (1%)
Strand=Plus/Plus
Query 26 TGCGTTTGCATTTTCTCTCGCTACTCTTACTTTGTTGTGTCTCCCCTTCAAGCTTTGTCA 85
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 11 TGCGTTTGCATTTTCTCTCGCTACTCTTACTCTGTTGTGTCTCCCCTTCAAGCTTTGTCA 70
Query 86 TTATAAGATTCATTACACATAATCATTTTGATGGTCTAGTACGTTGTCATCCCCACAAGT 145
||||||||||||||||| |||||| | ||| |||||| ||||||||||||||||||||||
Sbjct 71 TTATAAGATTCATTACAAATAATCCTGTTGCTGGTCTGGTACGTTGTCATCCCCACAAGT 130
Query 146 TTCAAGCCCTTACGCAGTTCAAGAACGAGTTTGATACCCGCCGTTGCAACCACAGTAACT 205
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct 131 TTCAAGCCCTTATACAGTTCAAGAACGAGTTTGATACCCGCCGTTGTAACCACAGTGACT 190
Query 206 ACTTTAATGGAATCTGGTGTGATAACTCCA-AGGTGCGGTCACAAAGCTACGACTACGGG 264
|||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 191 ACTTTAATGGAATCTGGTGTGATAACTCCACAGGTGCGGTCACGAAGCTACGACTACGGG 250
Query 265 ACTGTCTCAGTGGAACTCTCAAATCAAACAGTAGCCTCTTCCAGTTTCATCATCTTCGCT 324
|||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||
Sbjct 251 CCTGTCTTAGTGGAACTCTCAAGTCCAACAGCAGCCTCTTCCAGTTTCATCATCTTCGCT 310
Query 325 ACCTTGATCTCTCTCACAACAACTTCACCTCCTCTTCCCTCCCTTCCGAGTTT-G---TT 380
||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 311 ACCTTGATCTCTCTCACAACAACTTCACCTCCTCTTCCCTCCCTTCCGAGTTTGGAAATC 370
Query 381 TC--CCACTTTGCGGAATCTAACCAAGCTCACAGTTTTAGACCTTTCTCATAATCACTTC 438
|| | | || | ||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 371 TCAACAAATTAG-AGAATCTAACCAAGCTCACACTTTTAGACCTTTCTCGTAATCACTTC 429
Query 439 TCCGGAACTTTGAAGCCCAACAATAGCCTCTTTGAGTTACACCACCTTCGTTACCTTAAT 498
|| ||||||||||| ||||||| ||||||||||||||| |||| |||||||||||||||
Sbjct 430 TCTGGAACTTTGAATCCCAACAGTAGCCTCTTTGAGTTGCACCGTCTTCGTTACCTTAAT 489
Query 499 CTCGAGGTCAACAACTTCAGTTCCTCACTCCCTTCCGAGTTTGGCTATCTCAACAATTTA 558
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 490 CTCGAGGTCAATAACTTCAGTTCCTCACTCCCTTCCGAATTTGGCTATCTCAACAATTTA 549
Query 559 CAGCACTGTGGCCTCAAAGAGTTCCCAAACATATTCAAGACCCTTaaaaaaaTGGAGGCT 618
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||
Sbjct 550 GAGCACTGTGGCCTCAAAGAGTTCCCAAACATATTCAAGACCCTTCAAAAATTGGAAGCT 609
Query 619 ATAGACGTATCCAACAATAGAATCAACGGGAAAATCCCTGAGTGGTTATGGAGCCTTCCT 678
|||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||
Sbjct 610 ATAGACGTATCCAACAATAGAATCGACGGAAAAATCCCTGAATGGTTATGGAGCCTTCCT 669
Query 679 CTTCTTCATTTAGTGAATATTTTAAATAATTCTTTTGACGGTTTCGAAGGATCAACGGAA 738
||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 670 CTTCTGCATTTAGTGAATATTTTAAATAATTCTTTCGACGGTTTTGAAGGATCAACGGAA 729
Query 739 GTTTTAGTAAATTCATCGGTTCGGATATTACTTTTGGAGTCAAACAACTTTGAAGGAGCA 798
|||||||||| ||||||||| |||||||||||||| |||||||||||||| ||||||||
Sbjct 730 GTTTTAGTAAGTTCATCGGTGCGGATATTACTTTTAAAGTCAAACAACTTTCAAGGAGCA 789
Query 799 CTTCCTAGTCTACCACACTCTATCAACGCCTTCTCCGCGGGTCATAACAATTTCACT-GG 857
||||||||||| ||||||||||||||||||||||| |||||| |||| ||||||||| ||
Sbjct 790 CTTCCTAGTCTTCCACACTCTATCAACGCCTTCTCTGCGGGTTATAATAATTTCACTGGG 849
Query 858 AGAGATACCTCTTTCAATCTGCACCAGAACCTCACTTGGTGTCCTTGATCTAAACTACAA 917
| |||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||
Sbjct 850 A-AGATACCTCTTTCAATATGCACCAGAATCTCGCTTGGTGTCCTTGATCTAAACTACAA 908
Query 918 CAACCTCATTGGTCCGGTTTCTCAATGTTTGAGTAATGTCACGTTTGTAAATCTCCGGAA 977
||||||||| ||||| || ||||||||||||||||||| || |||||||||||||||||
Sbjct 909 CAACCTCATCGGTCCAATTCCTCAATGTTTGAGTAATGTGACATTTGTAAATCTCCGGAA 968
Query 978 AAACAATTTGGAAGGAACTATTCCTGAGACTTTCATTGTCGGTTCCTCGATAAGGACACT 1037
|||||||||||| ||||||||||| || || ||||||||||||||||| ||| ||||| |
Sbjct 969 AAACAATTTGGATGGAACTATTCCAGACACATTCATTGTCGGTTCCTCCATACGGACATT 1028
Query 1038 TGATGTTGGATACAATCGACTAACGGGAAAGCTTCCAAGGTCTCTTTTGAACTGCTCATC 1097
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct 1029 TGATGTTGGATACAATCGACTAACCGGAAAACTTCCAAGGTCTCTTTTGAATTGCTCATC 1088
Query 1098 TCTAGAGTTTCTAAGCGTTGACAACAACAGAATCAAAGACACATTTCCTTTCTGGCTCAA 1157
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1089 TCTAGAGTTTCTAAGCGTTGACAACAACAGAATCAAAGACATATTTCCTTTCTGGCTCAA 1148
Query 1158 GGCTTTACCAAAGTTACAAGTCCTTACCCTAAGTTCAAACAAGTTTTATGGTCCTATATC 1217
|||||||||||| || |||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1149 GGCTTTACCAAATTTGCAAGTCCTTACCCTTAGTTCAAACAAGTTCTATGGTCCTATATC 1208
Query 1218 TCCTCCTCATCAAGGTCCTCTCGGGTTTCCAGAGCTGAGAATACTTGAGATATCTGATAA 1277
||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||||||
Sbjct 1209 TCCTCCTCATCAAGGTCCTCTTGGATTTCCCGAGCTGCGAATACTTGAGATATCTGATAA 1268
Query 1278 TAAGTTTACTGGAAGCTTGTCGTCAAGATACTTTGAGAATTGGAAAGCATCGTCCGCCAT 1337
||| ||||||||||||||| || ||||||| |||| ||||||||||| ||||||| |||
Sbjct 1269 TAAATTTACTGGAAGCTTGCCGCCAAGATATTTTGTGAATTGGAAAGTATCGTCCTCCAA 1328
Query 1338 GATGAATGAATATGTGGGTTTATATATGGTTTACGAGAAGAATCCTTATGGTGTAGTTGT 1397
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1329 GATGAATGAATATGCGGGTTTATATATGGTTTACGAGAAGAATCCTTATGGTTTAGTTGT 1388
Query 1398 CTATACCTTTTTGGATCGTATAGATTTGAAATACAAAGGTCTAAACATGGAGCAAGCGAG 1457
|||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 1389 CTATACCTTTTTGGATCGTATAGATTTGAAGTACAAAGGTCTACACATGGAGCAAGCGAA 1448
Query 1458 GGTTCTCACTTCCTACAGCGCCATTGATTTTTCTAGAAATCTACTTGAAGGAAATATTCC 1517
||| || |||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 1449 GGTCCTAACTTCCTACAGCACCATTGATTTTTCTAGAAATCTACTTGAAGGAAACATTCC 1508
Query 1518 TGAATCCATTGGACTTTTAAAGGCATTGATTGCACTAAACTTATCGAACAACGCTTTTAC 1577
|||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1509 TGAATCCATTGGCCTTTTAAAGGCATTGATTGCACTCAACTTATCAAACAACGCTTTTAC 1568
Query 1578 AGGCCATATTCCTCAGTCTTTGGCAAATCTTAAGGAGCTCCAGTCACTAGACATGTCTAG 1637
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1569 AGGCCATATTCCTCAGTCTTTGGCCAATCTTAAGGAGCTCCAGTCACTAGACATGTCAAG 1628
Query 1638 GAACCAACTCTCAGGGACTATTCCTAATGGACTCAAG-CAACTCTCGTTTTTGGCTTACA 1696
|||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||
Sbjct 1629 AAACCAACTCTCAGGGACTATTCCTAATGGACTCAAGGCC-CTCTCGTTTTTGGCGTACA 1687
Query 1697 TAAGTGTGTCTCATAACCAACTCAAGGGTGAAATACCACAAGGAACACAAATTACTGGGC 1756
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1688 TAAATGTGTCTCATAACCAACTCAATGGTGAAATACCACAAGGAACACAAATTACTGGGC 1747
Query 1757 AATTGAAATCTTCCTTTGAAGGGAATGTAGGACTTTGTGGTCTTCCTCTCGAGGAAAGGT 1816
|||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| |
Sbjct 1748 AATTGAAATCCTCCTTTGAAGGGAATGCAGGGCTTTGTGGTCTTCCTCTCGAGGAAAGTT 1807
Query 1817 GCTTCGACAATAGTGCATCTCCAACG-CAGCACCACAAGCAAGACgaagaagaagaagaa 1875
||||||||| |||||||||||||| | ||| |||| ||| |||| |||||||||||||||
Sbjct 1808 GCTTCGACACTAGTGCATCTCCAA-GACAGGACCATAAGAAAGAAGAAGAAGAAGAAGAA 1866
Query 1876 gaa---------CAAGTGTTACACTGGAAAGCGGTGGCAATGGGGTATGGACCTGGATTG 1926
||| ||||||||| | |||||||| |||||||| |||||||||| |||| ||
Sbjct 1867 GAAGAAGAAGAACAAGTGTTAAATTGGAAAGCAGTGGCAATAGGGTATGGACTTGGAGTG 1926
Query 1927 TTGGTTGGATTTGCAATTGCATATGTCATTGCTTCATACAAGCCGGAGTGGCTAACCAAG 1986
||| ||||||| ||||| || | ||||||||||||||||||||||||||||| ||||||
Sbjct 1927 TTGTTTGGATTGGCAATAGCCCAAGTCATTGCTTCATACAAGCCGGAGTGGCTCACCAAG 1986
Query 1987 ATAATTGGTCCGAATAAGCGCAGAAA 2012
|||||||||||||||||||||| |||
Sbjct 1987 ATAATTGGTCCGAATAAGCGCA-AAA 2011
> Ahg482244 jgi|Araly1|482244|fgenesh2_kg.4__1304__AT2G33060.1
Length=2704
Score = 828 bits (448), Expect = 0.0
Identities = 1139/1460 (78%), Gaps = 97/1460 (7%)
Strand=Plus/Plus
Query 565 TGTGGCCTCAAAGAGTTCCCAAACATATTCAAGACCCTTaaaaaaaTGGAGGCTATAGAC 624
||||| |||| |||||||||| ||| || |||| |||||| ||| ||||| |||||||
Sbjct 1086 TGTGGTCTCATTGAGTTCCCAACCATCTTAAAGAACCTTAAGAAATTGGAGTATATAGAC 1145
Query 625 GTATCCAACAATAGAATCAACGGGAAAATCCCTGAGTGGTTATGGAGCCTTCCTCTTCT- 683
| |||||||||| ||| || |||||| ||||||||||||| |||| |||||||| |||
Sbjct 1146 CTTTCCAACAATAAAATAAAAGGGAAAGTCCCTGAGTGGTTGTGGAACCTTCCTCGTCTG 1205
Query 684 -TCATTTAGTGAATATTTTAAATAATTCTTTTGAC-GGTTTCGAAGGATCAACG-GAAGT 740
|| ||||||| ||||||| |||| | || || | ||| ||||| || | |||||
Sbjct 1206 GGCA--GAGTGAATCTTTTAAACAATT-TGTTCACTGATTTAGAAGGTTC-GGGAGAAGT 1261
Query 741 TTTAGTAAATTCATCGGTTCGGATATTACTTTTGGAGTCA-AACAACTTTGA-AGGAGCA 798
|||| | ||||||||||| || | ||| ||||| || | ||| | ||| | |||| ||
Sbjct 1262 TTTACTGAATTCATCGGTGAGGTTTTTAGATTTGG-GTTATAACCA-TTTTAGAGGACCA 1319
Query 799 CTTCCTAGTCTACCACACTCTATCAACGC-CTTCTCCGC-GGGTCATAACAATTTCACTG 856
|||| | | ||||| |||||||||| | ||| || || || | || | |||||| |
Sbjct 1320 TTTCCAAAACCACCACTCTCTATCAAC-CTCTTATCTGCATGG-AACAATAGTTTCACAG 1377
Query 857 GAGAGATACCTCTTTCAATCTGC-ACCAGAACCTCACTTGGTGTCCTTGATCTAAACTAC 915
|| | ||||||||| || |||| ||| ||| ||| |||| ||| ||||| ||| ||||
Sbjct 1378 GAAACATACCTCTTGAAACCTGCAACC-GAAGCTCTCTTGCTGTTCTTGACCTATCCTAC 1436
Query 916 AACAACCTCATTGGTCCGGTTTCTCAATGTTTGAGTAATGT-C---A--C-GT--TTGTA 966
|||||| | | |||||| || ||| |||||||||||| | | | | | |||||
Sbjct 1437 AACAACTTAACTGGTCCAATTCCTCGTTGTTTGAGTAATTTCCAAGAGTCTCTCATTGTA 1496
Query 967 ---AATCTCCGGAAAAACAATTTGGAAGGAACTATTCCTGAGACT-TTCAT-TG-TCGGT 1020
|| |||||||| ||||| |||||||||| | |||| || | | ||| | || | |||
Sbjct 1497 GTGAACCTCCGGAAGAACAACTTGGAAGGAAGTCTTCCAGATA-TATTC-TCTGAT-GGT 1553
Query 1021 TCCTCGATAAGGACACTTGATGTTGGATACAATCGACTAA-CGGGAAAGCTTCCAAGGTC 1079
||| | | |||||||||| ||||| ||||||| ||||| |||| ||||||||||||||
Sbjct 1554 GCCTTGCTTCGGACACTTGACGTTGGCTACAATCAACTAACCGGG-AAGCTTCCAAGGTC 1612
Query 1080 TCTTTTGAACTGCTCAT-CTCT-AGAGTTTCTAAGCGTTGACAACAACAGAATCAAAGAC 1137
|||| |||| ||||| | | || || |||| |||| || ||| |||||||||||||||||
Sbjct 1613 TCTTCTGAATTGCTC-TACGCTAAG-GTTTGTAAGTGTAGACCACAACAGAATCAAAGAC 1670
Query 1138 ACATTTCCTTTCTGGCTCAAGGCTTTACCAAAGTTACAAG-TCCTTACCCTAAGTTCAAA 1196
||||||||||||||||| ||||||||||| | ||||||| || ||||||| |||||||
Sbjct 1671 ACATTTCCTTTCTGGCTTAAGGCTTTACCTGATTTACAAGCTC-TTACCCTCCGTTCAAA 1729
Query 1197 CAAGTTTTATGGTCCTATATCTCCTCCTCATCAAGGTCCTCTCGGGTTTCC-AGAGCTGA 1255
||| || |||| ||||||||||||||| ||| ||||||||| | |||||| | |||||
Sbjct 1730 CAAATTCCATGGCCCTATATCTCCTCCTGATCGAGGTCCTCTTGCGTTTCCCA-AGCTGC 1788
Query 1256 GAATACTTGAGATATCTGATAATAAGTTTACT-GGAAGCTTGTCGTCAAGAT-ACTTTGA 1313
| |||||||| ||| | ||||| || ||| | ||||||||| | ||| || ||||||
Sbjct 1789 GCATACTTGAAATAGCAGATAACAACCTTA-TAGGAAGCTTGCCACCAA-ATTACTTTGT 1846
Query 1314 GAATTGGAAAGCATCGTC-CGCCATGATGAATGAATATGTGG-GTTTATATATGGTTTAC 1371
||||||| ||||||| || | ||| ||||||||| ||| || | | ||||||| | ||
Sbjct 1847 GAATTGGGAAGCATCATCACTCCAC-ATGAATGAAGATG-GGAGAATCTATATGGGTGAC 1904
Query 1372 GAGAAGAATCCTTA-TGGTGTAGT-TGTCTATACCTTTTTGGATCGTATAGATTTGAAAT 1429
| || |||||||| | | || | || |||| | | | |||||| |||
Sbjct 1905 TACAACAATCCTTACTA-TATA-TATGAAGATACA-----G--T-G----GATTTGCAAT 1950
Query 1430 ACAAAGGTCTAAACATGGAGCAAGCGAG-GGTTCTCACTTCCTACAGCG-CCATTGATTT 1487
||||||||||| ||||||||||| || ||| || |||||||| || ||||||||||
Sbjct 1951 ACAAAGGTCTATTCATGGAGCAAG-GAAAGGTCCTTACTTCCTAT-GCCACCATTGATTT 2008
Query 1488 TTCTAGAAATCTA-CTTGAAGGAAATATTCCTGAATCCATTGGACTTTTAAAGGCATTGA 1546
|||| | || | | ||||||||| | ||||| ||||||||||| | ||| ||||||||||
Sbjct 2009 TTCTGGGAA-CAAACTTGAAGGACAGATTCCCGAATCCATTGGTCATTTGAAGGCATTGA 2067
Query 1547 TTGCACTAAACTTATCGAACAACGCTTTTACAGGCCATATTCCTC-AGTCTTTGGCAAAT 1605
||||||| |||||||| |||||||| || |||||||||||||||| | |||||||||||
Sbjct 2068 TTGCACTCAACTTATCAAACAACGCATTCACAGGCCATATTCCTCCA-TCTTTGGCAAA- 2125
Query 1606 CTT-A-AGGAGCTCCAGTCACTAGACATGTCTAGGAACCAACTCTCAGGGACTATTCCTA 1663
| | | || |||| ||||||||||| | || || |||||||| || |||| ||||||||
Sbjct 2126 CGTGACAG-AGCTGGAGTCACTAGACCTCTCAAGAAACCAACTGTCCGGGAATATTCCTA 2184
Query 1664 ATGGACTCAAGCAAC-TCTCGTTTTTGGCTTACATAAGTGTGTCTCATAACCAACTCA-A 1721
| |||||| | | | ||||||||||||| |||||||||||| | ||||||||||||| |
Sbjct 2185 AAGGACTCGGG-AGCCTCTCGTTTTTGGCGTACATAAGTGTGGCCCATAACCAACTCACA 2243
Query 1722 GGGTGAAATACCACAAGGAACACAAATTACTGGGCAAT-TGAAATCTTCCTTTGAAGGGA 1780
|| ||||||||||||||| |||||||| |||||||||| | ||||| |||||||||||||
Sbjct 2244 GG-TGAAATACCACAAGGGACACAAATCACTGGGCAATCT-AAATCCTCCTTTGAAGGGA 2301
Query 1781 ATGTAGGACTTTGTGGTCTTCCTCTCGAGGAAAGGTGCTTCGACAATAGTGCATCTCCAA 1840
||| ||| ||||||||||||||| | ||||| | ||||| | | || ||| | ||||
Sbjct 2302 ATGCAGGGCTTTGTGGTCTTCCTTTGGAGGAGACTTGCTTTGGGAGTAATGCGCCACCAA 2361
Query 1841 CGCAGCA-CCACAAGCAAGACgaagaagaagaagaagaaCAAGTGTTACACTGGAAAGCG 1899
| || || || ||| |||| || |||||||| | |||||||||||| ||||||||||
Sbjct 2362 CACAACAGCCT-AAGGAAGAAGACGAAGAAGA-G--GAACAAGTGTTAAACTGGAAAGCA 2417
Query 1900 GTGGCA-ATGGGGTATGGACCTGGATTGTTGGTT-GGATTTGCAATTGCATATGTCATTG 1957
|| | || |||||||| |||||| || || || || || | ||| ||| | || ||||
Sbjct 2418 ATG-CTTATAGGGTATGGGCCTGGACTGCTG-TTCGGGTTGGTAATAGCACACGTTATTG 2475
Query 1958 CTTCATACAAGCCGGAGTGG 1977
|||||||||||||| |||||
Sbjct 2476 CTTCATACAAGCCGAAGTGG 2495
> Ahg497402 jgi|Araly1|497402|fgenesh2_kg.348__3__AT2G33060.1
Length=1952
Score = 556 bits (301), Expect = 2e-157
Identities = 698/882 (79%), Gaps = 57/882 (6%)
Strand=Plus/Plus
Query 1117 GACAACAACAGAATCAAAGACACATTTCCTTTCTGGCTCAAGGCTTTACCAAAGTTACAA 1176
||| |||||||||||||||||||||||||||||||||| ||||||||||| | ||||||
Sbjct 898 GACCACAACAGAATCAAAGACACATTTCCTTTCTGGCTTAAGGCTTTACCTGATTTACAA 957
Query 1177 G-TCCTTACCCTAAGTTCAAACAAGTTTT-ATGGTCCTATATCTCCTCCTCATCAAGGTC 1234
| || ||||||| |||||||||| ||| |||| ||||| | | ||||| ||| |||||
Sbjct 958 GCTC-TTACCCTCCGTTCAAACAA-TTTCCATGGCCCTATCTATACTCCTGATCGAGGTC 1015
Query 1235 CTCTCGGGTTTCC-AGAGCTGAGAATACTTGAGATATCTGATAATAAGTTTACT-GGAAG 1292
|||| | |||||| | ||||| | |||||||| ||| | ||||| || ||| | |||||
Sbjct 1016 CTCTTGCGTTTCCCA-AGCTGCGCATACTTGAAATAGCAGATAACAACCTTA-TAGGAAG 1073
Query 1293 CTTGTCGTCAAGAT-ACTTTGAGAATTGGAAAGCATCGTC-CGCCATGATGAATGAATAT 1350
|||| | ||| || |||||| ||||||| ||||||| || | ||| ||||||||| ||
Sbjct 1074 CTTGCCACCAA-ATTACTTTGTGAATTGGGAAGCATCATCACTCCAC-ATGAATGAAGAT 1131
Query 1351 GTGG-GTTTATATATGGTTTACGAGAAGAATCCTTA-TGGTGTAGT-TGTCTATACCTTT 1407
| || | | ||||||| | || | || |||||||| | | || | || ||||
Sbjct 1132 G-GGAGAATCTATATGGGTGACTACAACAATCCTTACTA-TATA-TATGAAGATACA--- 1185
Query 1408 TTGGATCGTATAGATTTGAAATACAAAGGTCTAAACATGGAGCAAGCGAG-GGTTCTCAC 1466
| | | |||||| |||||||||||||| ||||||||||| || ||| || ||
Sbjct 1186 --G--T-G----GATTTGCAATACAAAGGTCTATTCATGGAGCAAG-GAAAGGTCCTTAC 1235
Query 1467 TTCCTACAGCG-CCATTGATTTTTCTAGAAATCTA-CTTGAAGGAAATATTCCTGAATCC 1524
|||||| || |||||||||||||| | || | | ||||||||| | ||||| ||||||
Sbjct 1236 TTCCTAT-GCCACCATTGATTTTTCTGGGAA-CAAACTTGAAGGACAGATTCCCGAATCC 1293
Query 1525 ATTGGACTTTTAAAGGCATTGATTGCACTAAACTTATCGAACAACGCTTTTACAGGCCAT 1584
||||| | ||| ||||||||||||||||| |||||||| |||||||| || |||||||||
Sbjct 1294 ATTGGTCATTTGAAGGCATTGATTGCACTCAACTTATCAAACAACGCATTCACAGGCCAT 1353
Query 1585 ATTCCTC-AGTCTTTGGCAAATCTT-A-AGGAGCTCCAGTCACTAGACATGTCTAGGAAC 1641
||||||| | ||||||||||| | | | || |||| ||||||||||| | || || |||
Sbjct 1354 ATTCCTCCA-TCTTTGGCAAA-CGTGACAG-AGCTGGAGTCACTAGACCTCTCAAGAAAC 1410
Query 1642 CAACTCTCAGGGACTATTCCTAATGGACTCAAGCAAC-TCTCGTTTTTGGCTTACATAAG 1700
||||| || |||| ||||||||| |||||| | | | ||||||||||||| ||||||||
Sbjct 1411 CAACTGTCCGGGAATATTCCTAAAGGACTCGGG-AGCCTCTCGTTTTTGGCGTACATAAG 1469
Query 1701 TGTGTCTCATAACCAACTCA-AGGGTGAAATACCACAAGGAACACAAATTACTGGGCAAT 1759
|||| | || |||||||||| ||| ||||||||| ||||| |||||||| ||||||||||
Sbjct 1470 TGTGGCCCACAACCAACTCACAGG-TGAAATACCGCAAGGGACACAAATCACTGGGCAAT 1528
Query 1760 -TGAAATCTTCCTTTGAAGGGAATGTAGGACTTTGTGGTCTTCCTCTCGAGGAAAGGTGC 1818
| ||||| |||||||||||||||| ||| ||||||||||||||| | ||||| | |||
Sbjct 1529 CT-AAATCCTCCTTTGAAGGGAATGCAGGGCTTTGTGGTCTTCCTTTGGAGGAGACTTGC 1587
Query 1819 TTCGACAATAGTGCATCTCCAACGCAGCA-CCACAAGCAAGACgaagaagaagaagaaga 1877
|| | | || ||| | ||||| || || || ||| |||| || |||||||| | ||
Sbjct 1588 TTTGGGAGTAATGCGCCACCAACACAACAGCCT-AAGGAAGAAGACGAAGAAGA-G--GA 1643
Query 1878 aCAAGTGTTACACTGGAAAGCGGTGGCA-ATGGGGTATGGACCTGGATTGTTGGTT-GGA 1935
|||||||||| |||||||||| || | || |||||||| |||||| || || || ||
Sbjct 1644 ACAAGTGTTAAACTGGAAAGCAATG-CTTATAGGGTATGGGCCTGGACTGCTG-TTCGGG 1701
Query 1936 TTTGCAATTGCATATGTCATTGCTTCATACAAGCCGGAGTGG 1977
|| | ||| ||| | || |||||||||||||||||| |||||
Sbjct 1702 TTGGTAATAGCACACGTTATTGCTTCATACAAGCCGAAGTGG 1743
> Ahg480073 jgi|Araly1|480073|fgenesh2_kg.3__2774__AT3G24982.1
Length=2686
Score = 274 bits (148), Expect = 2e-72
Identities = 295/362 (81%), Gaps = 25/362 (7%)
Strand=Plus/Plus
Query 24 TTTGCGTTTGCATTTTCTCTCGCTACTCTTACTTTGTTGTGTCTCCCCTTCAAGCTTTGT 83
|||||||||| ||||||| | ||||||||| || | ||||||||||||||||||| |
Sbjct 65 TTTGCGTTTGAATTTTCTTTTGCTACTCTTGCTCTCTTGTGTCTCCCCTTCAAGC---CT 121
Query 84 CATTATAAGATTCATTACACATAATCATTTTGATGGTC-TAGTACGTTGTCATCCCCACA 142
| || | | | || | |||| | | ||| ||||| | || | |||| |||||||
Sbjct 122 C-TT-CACG--T--TT--A-ATAACCCTGTTGTTGGTCTTGGTGC-TTGTGGTCCCCACC 171
Query 143 AGTTTCAAGCCCTTACGCAGTTCAAGAACGAGTTTGATACCCGC-CGTTGCAACCACAGT 201
|| |||||||| |||||||||||||||||||||||||||| || | ||||||||| |||
Sbjct 172 AGATTCAAGCCTTTACGCAGTTCAAGAACGAGTTTGATACTCGTGC-TTGCAACCATAGT 230
Query 202 AACTACTTT-AATGGAATCTGGTGTGATAACTCCAAGGTGC--GGTCACAAAGCTACGAC 258
|| ||| |||||| | ||||| |||||||||| || || |||||| ||||||||||
Sbjct 231 GACC-CTTGGAATGGAGTGTGGTGCGATAACTCCACGG-GCACGGTCACGAAGCTACGAC 288
Query 259 TACGGGAC-TGTCTCAGTGGAACTCTCAAATCAAACAGTAGCCTCTTCCAGTTTCATCAT 317
| |||| | ||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 289 T-CGGGGCCTGTCTCAGTGGAACTCTGAAATCCAACAGTAGCCTCTTCCAGTTTCATCAT 347
Query 318 CTTCG-CTACCTTGATCTCTCTCACAACAACTTCACCTCCTCTTCCCTCCCTTCCGAGTT 376
||||| | ||||| ||||||||||||||| |||||| ||||||| ||| |||| ||||
Sbjct 348 CTTCGTC-ACCTTTCTCTCTCTCACAACAAATTCACCCCCTCTTCAATCCTTTCCAAGTT 406
Query 377 TG 378
||
Sbjct 407 TG 408
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75799587550
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5