BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G25440.1 Length=2016 Score E Sequences producing significant alignments: (Bits) Value Ahg481397 jgi|Araly1|481397|fgenesh2_kg.4__457__AT2G25440.1 2846 0.0 Ahg482244 jgi|Araly1|482244|fgenesh2_kg.4__1304__AT2G33060.1 828 0.0 Ahg497402 jgi|Araly1|497402|fgenesh2_kg.348__3__AT2G33060.1 556 2e-157 Ahg480073 jgi|Araly1|480073|fgenesh2_kg.3__2774__AT3G24982.1 274 2e-72 > Ahg481397 jgi|Araly1|481397|fgenesh2_kg.4__457__AT2G25440.1 Length=2019 Score = 2846 bits (1541), Expect = 0.0 Identities = 1855/2006 (92%), Gaps = 24/2006 (1%) Strand=Plus/Plus Query 26 TGCGTTTGCATTTTCTCTCGCTACTCTTACTTTGTTGTGTCTCCCCTTCAAGCTTTGTCA 85 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 11 TGCGTTTGCATTTTCTCTCGCTACTCTTACTCTGTTGTGTCTCCCCTTCAAGCTTTGTCA 70 Query 86 TTATAAGATTCATTACACATAATCATTTTGATGGTCTAGTACGTTGTCATCCCCACAAGT 145 ||||||||||||||||| |||||| | ||| |||||| |||||||||||||||||||||| Sbjct 71 TTATAAGATTCATTACAAATAATCCTGTTGCTGGTCTGGTACGTTGTCATCCCCACAAGT 130 Query 146 TTCAAGCCCTTACGCAGTTCAAGAACGAGTTTGATACCCGCCGTTGCAACCACAGTAACT 205 |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct 131 TTCAAGCCCTTATACAGTTCAAGAACGAGTTTGATACCCGCCGTTGTAACCACAGTGACT 190 Query 206 ACTTTAATGGAATCTGGTGTGATAACTCCA-AGGTGCGGTCACAAAGCTACGACTACGGG 264 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct 191 ACTTTAATGGAATCTGGTGTGATAACTCCACAGGTGCGGTCACGAAGCTACGACTACGGG 250 Query 265 ACTGTCTCAGTGGAACTCTCAAATCAAACAGTAGCCTCTTCCAGTTTCATCATCTTCGCT 324 |||||| |||||||||||||| || ||||| |||||||||||||||||||||||||||| Sbjct 251 CCTGTCTTAGTGGAACTCTCAAGTCCAACAGCAGCCTCTTCCAGTTTCATCATCTTCGCT 310 Query 325 ACCTTGATCTCTCTCACAACAACTTCACCTCCTCTTCCCTCCCTTCCGAGTTT-G---TT 380 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 311 ACCTTGATCTCTCTCACAACAACTTCACCTCCTCTTCCCTCCCTTCCGAGTTTGGAAATC 370 Query 381 TC--CCACTTTGCGGAATCTAACCAAGCTCACAGTTTTAGACCTTTCTCATAATCACTTC 438 || | | || | ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 371 TCAACAAATTAG-AGAATCTAACCAAGCTCACACTTTTAGACCTTTCTCGTAATCACTTC 429 Query 439 TCCGGAACTTTGAAGCCCAACAATAGCCTCTTTGAGTTACACCACCTTCGTTACCTTAAT 498 || ||||||||||| ||||||| ||||||||||||||| |||| ||||||||||||||| Sbjct 430 TCTGGAACTTTGAATCCCAACAGTAGCCTCTTTGAGTTGCACCGTCTTCGTTACCTTAAT 489 Query 499 CTCGAGGTCAACAACTTCAGTTCCTCACTCCCTTCCGAGTTTGGCTATCTCAACAATTTA 558 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 490 CTCGAGGTCAATAACTTCAGTTCCTCACTCCCTTCCGAATTTGGCTATCTCAACAATTTA 549 Query 559 CAGCACTGTGGCCTCAAAGAGTTCCCAAACATATTCAAGACCCTTaaaaaaaTGGAGGCT 618 |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| Sbjct 550 GAGCACTGTGGCCTCAAAGAGTTCCCAAACATATTCAAGACCCTTCAAAAATTGGAAGCT 609 Query 619 ATAGACGTATCCAACAATAGAATCAACGGGAAAATCCCTGAGTGGTTATGGAGCCTTCCT 678 |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||| Sbjct 610 ATAGACGTATCCAACAATAGAATCGACGGAAAAATCCCTGAATGGTTATGGAGCCTTCCT 669 Query 679 CTTCTTCATTTAGTGAATATTTTAAATAATTCTTTTGACGGTTTCGAAGGATCAACGGAA 738 ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 670 CTTCTGCATTTAGTGAATATTTTAAATAATTCTTTCGACGGTTTTGAAGGATCAACGGAA 729 Query 739 GTTTTAGTAAATTCATCGGTTCGGATATTACTTTTGGAGTCAAACAACTTTGAAGGAGCA 798 |||||||||| ||||||||| |||||||||||||| |||||||||||||| |||||||| Sbjct 730 GTTTTAGTAAGTTCATCGGTGCGGATATTACTTTTAAAGTCAAACAACTTTCAAGGAGCA 789 Query 799 CTTCCTAGTCTACCACACTCTATCAACGCCTTCTCCGCGGGTCATAACAATTTCACT-GG 857 ||||||||||| ||||||||||||||||||||||| |||||| |||| ||||||||| || Sbjct 790 CTTCCTAGTCTTCCACACTCTATCAACGCCTTCTCTGCGGGTTATAATAATTTCACTGGG 849 Query 858 AGAGATACCTCTTTCAATCTGCACCAGAACCTCACTTGGTGTCCTTGATCTAAACTACAA 917 | |||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||| Sbjct 850 A-AGATACCTCTTTCAATATGCACCAGAATCTCGCTTGGTGTCCTTGATCTAAACTACAA 908 Query 918 CAACCTCATTGGTCCGGTTTCTCAATGTTTGAGTAATGTCACGTTTGTAAATCTCCGGAA 977 ||||||||| ||||| || ||||||||||||||||||| || ||||||||||||||||| Sbjct 909 CAACCTCATCGGTCCAATTCCTCAATGTTTGAGTAATGTGACATTTGTAAATCTCCGGAA 968 Query 978 AAACAATTTGGAAGGAACTATTCCTGAGACTTTCATTGTCGGTTCCTCGATAAGGACACT 1037 |||||||||||| ||||||||||| || || ||||||||||||||||| ||| ||||| | Sbjct 969 AAACAATTTGGATGGAACTATTCCAGACACATTCATTGTCGGTTCCTCCATACGGACATT 1028 Query 1038 TGATGTTGGATACAATCGACTAACGGGAAAGCTTCCAAGGTCTCTTTTGAACTGCTCATC 1097 |||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| Sbjct 1029 TGATGTTGGATACAATCGACTAACCGGAAAACTTCCAAGGTCTCTTTTGAATTGCTCATC 1088 Query 1098 TCTAGAGTTTCTAAGCGTTGACAACAACAGAATCAAAGACACATTTCCTTTCTGGCTCAA 1157 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1089 TCTAGAGTTTCTAAGCGTTGACAACAACAGAATCAAAGACATATTTCCTTTCTGGCTCAA 1148 Query 1158 GGCTTTACCAAAGTTACAAGTCCTTACCCTAAGTTCAAACAAGTTTTATGGTCCTATATC 1217 |||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||| Sbjct 1149 GGCTTTACCAAATTTGCAAGTCCTTACCCTTAGTTCAAACAAGTTCTATGGTCCTATATC 1208 Query 1218 TCCTCCTCATCAAGGTCCTCTCGGGTTTCCAGAGCTGAGAATACTTGAGATATCTGATAA 1277 ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||| Sbjct 1209 TCCTCCTCATCAAGGTCCTCTTGGATTTCCCGAGCTGCGAATACTTGAGATATCTGATAA 1268 Query 1278 TAAGTTTACTGGAAGCTTGTCGTCAAGATACTTTGAGAATTGGAAAGCATCGTCCGCCAT 1337 ||| ||||||||||||||| || ||||||| |||| ||||||||||| ||||||| ||| Sbjct 1269 TAAATTTACTGGAAGCTTGCCGCCAAGATATTTTGTGAATTGGAAAGTATCGTCCTCCAA 1328 Query 1338 GATGAATGAATATGTGGGTTTATATATGGTTTACGAGAAGAATCCTTATGGTGTAGTTGT 1397 |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1329 GATGAATGAATATGCGGGTTTATATATGGTTTACGAGAAGAATCCTTATGGTTTAGTTGT 1388 Query 1398 CTATACCTTTTTGGATCGTATAGATTTGAAATACAAAGGTCTAAACATGGAGCAAGCGAG 1457 |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct 1389 CTATACCTTTTTGGATCGTATAGATTTGAAGTACAAAGGTCTACACATGGAGCAAGCGAA 1448 Query 1458 GGTTCTCACTTCCTACAGCGCCATTGATTTTTCTAGAAATCTACTTGAAGGAAATATTCC 1517 ||| || |||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct 1449 GGTCCTAACTTCCTACAGCACCATTGATTTTTCTAGAAATCTACTTGAAGGAAACATTCC 1508 Query 1518 TGAATCCATTGGACTTTTAAAGGCATTGATTGCACTAAACTTATCGAACAACGCTTTTAC 1577 |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 1509 TGAATCCATTGGCCTTTTAAAGGCATTGATTGCACTCAACTTATCAAACAACGCTTTTAC 1568 Query 1578 AGGCCATATTCCTCAGTCTTTGGCAAATCTTAAGGAGCTCCAGTCACTAGACATGTCTAG 1637 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 1569 AGGCCATATTCCTCAGTCTTTGGCCAATCTTAAGGAGCTCCAGTCACTAGACATGTCAAG 1628 Query 1638 GAACCAACTCTCAGGGACTATTCCTAATGGACTCAAG-CAACTCTCGTTTTTGGCTTACA 1696 |||||||||||||||||||||||||||||||||||| | |||||||||||||| |||| Sbjct 1629 AAACCAACTCTCAGGGACTATTCCTAATGGACTCAAGGCC-CTCTCGTTTTTGGCGTACA 1687 Query 1697 TAAGTGTGTCTCATAACCAACTCAAGGGTGAAATACCACAAGGAACACAAATTACTGGGC 1756 ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1688 TAAATGTGTCTCATAACCAACTCAATGGTGAAATACCACAAGGAACACAAATTACTGGGC 1747 Query 1757 AATTGAAATCTTCCTTTGAAGGGAATGTAGGACTTTGTGGTCTTCCTCTCGAGGAAAGGT 1816 |||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| | Sbjct 1748 AATTGAAATCCTCCTTTGAAGGGAATGCAGGGCTTTGTGGTCTTCCTCTCGAGGAAAGTT 1807 Query 1817 GCTTCGACAATAGTGCATCTCCAACG-CAGCACCACAAGCAAGACgaagaagaagaagaa 1875 ||||||||| |||||||||||||| | ||| |||| ||| |||| ||||||||||||||| Sbjct 1808 GCTTCGACACTAGTGCATCTCCAA-GACAGGACCATAAGAAAGAAGAAGAAGAAGAAGAA 1866 Query 1876 gaa---------CAAGTGTTACACTGGAAAGCGGTGGCAATGGGGTATGGACCTGGATTG 1926 ||| ||||||||| | |||||||| |||||||| |||||||||| |||| || Sbjct 1867 GAAGAAGAAGAACAAGTGTTAAATTGGAAAGCAGTGGCAATAGGGTATGGACTTGGAGTG 1926 Query 1927 TTGGTTGGATTTGCAATTGCATATGTCATTGCTTCATACAAGCCGGAGTGGCTAACCAAG 1986 ||| ||||||| ||||| || | ||||||||||||||||||||||||||||| |||||| Sbjct 1927 TTGTTTGGATTGGCAATAGCCCAAGTCATTGCTTCATACAAGCCGGAGTGGCTCACCAAG 1986 Query 1987 ATAATTGGTCCGAATAAGCGCAGAAA 2012 |||||||||||||||||||||| ||| Sbjct 1987 ATAATTGGTCCGAATAAGCGCA-AAA 2011 > Ahg482244 jgi|Araly1|482244|fgenesh2_kg.4__1304__AT2G33060.1 Length=2704 Score = 828 bits (448), Expect = 0.0 Identities = 1139/1460 (78%), Gaps = 97/1460 (7%) Strand=Plus/Plus Query 565 TGTGGCCTCAAAGAGTTCCCAAACATATTCAAGACCCTTaaaaaaaTGGAGGCTATAGAC 624 ||||| |||| |||||||||| ||| || |||| |||||| ||| ||||| ||||||| Sbjct 1086 TGTGGTCTCATTGAGTTCCCAACCATCTTAAAGAACCTTAAGAAATTGGAGTATATAGAC 1145 Query 625 GTATCCAACAATAGAATCAACGGGAAAATCCCTGAGTGGTTATGGAGCCTTCCTCTTCT- 683 | |||||||||| ||| || |||||| ||||||||||||| |||| |||||||| ||| Sbjct 1146 CTTTCCAACAATAAAATAAAAGGGAAAGTCCCTGAGTGGTTGTGGAACCTTCCTCGTCTG 1205 Query 684 -TCATTTAGTGAATATTTTAAATAATTCTTTTGAC-GGTTTCGAAGGATCAACG-GAAGT 740 || ||||||| ||||||| |||| | || || | ||| ||||| || | ||||| Sbjct 1206 GGCA--GAGTGAATCTTTTAAACAATT-TGTTCACTGATTTAGAAGGTTC-GGGAGAAGT 1261 Query 741 TTTAGTAAATTCATCGGTTCGGATATTACTTTTGGAGTCA-AACAACTTTGA-AGGAGCA 798 |||| | ||||||||||| || | ||| ||||| || | ||| | ||| | |||| || Sbjct 1262 TTTACTGAATTCATCGGTGAGGTTTTTAGATTTGG-GTTATAACCA-TTTTAGAGGACCA 1319 Query 799 CTTCCTAGTCTACCACACTCTATCAACGC-CTTCTCCGC-GGGTCATAACAATTTCACTG 856 |||| | | ||||| |||||||||| | ||| || || || | || | |||||| | Sbjct 1320 TTTCCAAAACCACCACTCTCTATCAAC-CTCTTATCTGCATGG-AACAATAGTTTCACAG 1377 Query 857 GAGAGATACCTCTTTCAATCTGC-ACCAGAACCTCACTTGGTGTCCTTGATCTAAACTAC 915 || | ||||||||| || |||| ||| ||| ||| |||| ||| ||||| ||| |||| Sbjct 1378 GAAACATACCTCTTGAAACCTGCAACC-GAAGCTCTCTTGCTGTTCTTGACCTATCCTAC 1436 Query 916 AACAACCTCATTGGTCCGGTTTCTCAATGTTTGAGTAATGT-C---A--C-GT--TTGTA 966 |||||| | | |||||| || ||| |||||||||||| | | | | | ||||| Sbjct 1437 AACAACTTAACTGGTCCAATTCCTCGTTGTTTGAGTAATTTCCAAGAGTCTCTCATTGTA 1496 Query 967 ---AATCTCCGGAAAAACAATTTGGAAGGAACTATTCCTGAGACT-TTCAT-TG-TCGGT 1020 || |||||||| ||||| |||||||||| | |||| || | | ||| | || | ||| Sbjct 1497 GTGAACCTCCGGAAGAACAACTTGGAAGGAAGTCTTCCAGATA-TATTC-TCTGAT-GGT 1553 Query 1021 TCCTCGATAAGGACACTTGATGTTGGATACAATCGACTAA-CGGGAAAGCTTCCAAGGTC 1079 ||| | | |||||||||| ||||| ||||||| ||||| |||| |||||||||||||| Sbjct 1554 GCCTTGCTTCGGACACTTGACGTTGGCTACAATCAACTAACCGGG-AAGCTTCCAAGGTC 1612 Query 1080 TCTTTTGAACTGCTCAT-CTCT-AGAGTTTCTAAGCGTTGACAACAACAGAATCAAAGAC 1137 |||| |||| ||||| | | || || |||| |||| || ||| ||||||||||||||||| Sbjct 1613 TCTTCTGAATTGCTC-TACGCTAAG-GTTTGTAAGTGTAGACCACAACAGAATCAAAGAC 1670 Query 1138 ACATTTCCTTTCTGGCTCAAGGCTTTACCAAAGTTACAAG-TCCTTACCCTAAGTTCAAA 1196 ||||||||||||||||| ||||||||||| | ||||||| || ||||||| ||||||| Sbjct 1671 ACATTTCCTTTCTGGCTTAAGGCTTTACCTGATTTACAAGCTC-TTACCCTCCGTTCAAA 1729 Query 1197 CAAGTTTTATGGTCCTATATCTCCTCCTCATCAAGGTCCTCTCGGGTTTCC-AGAGCTGA 1255 ||| || |||| ||||||||||||||| ||| ||||||||| | |||||| | ||||| Sbjct 1730 CAAATTCCATGGCCCTATATCTCCTCCTGATCGAGGTCCTCTTGCGTTTCCCA-AGCTGC 1788 Query 1256 GAATACTTGAGATATCTGATAATAAGTTTACT-GGAAGCTTGTCGTCAAGAT-ACTTTGA 1313 | |||||||| ||| | ||||| || ||| | ||||||||| | ||| || |||||| Sbjct 1789 GCATACTTGAAATAGCAGATAACAACCTTA-TAGGAAGCTTGCCACCAA-ATTACTTTGT 1846 Query 1314 GAATTGGAAAGCATCGTC-CGCCATGATGAATGAATATGTGG-GTTTATATATGGTTTAC 1371 ||||||| ||||||| || | ||| ||||||||| ||| || | | ||||||| | || Sbjct 1847 GAATTGGGAAGCATCATCACTCCAC-ATGAATGAAGATG-GGAGAATCTATATGGGTGAC 1904 Query 1372 GAGAAGAATCCTTA-TGGTGTAGT-TGTCTATACCTTTTTGGATCGTATAGATTTGAAAT 1429 | || |||||||| | | || | || |||| | | | |||||| ||| Sbjct 1905 TACAACAATCCTTACTA-TATA-TATGAAGATACA-----G--T-G----GATTTGCAAT 1950 Query 1430 ACAAAGGTCTAAACATGGAGCAAGCGAG-GGTTCTCACTTCCTACAGCG-CCATTGATTT 1487 ||||||||||| ||||||||||| || ||| || |||||||| || |||||||||| Sbjct 1951 ACAAAGGTCTATTCATGGAGCAAG-GAAAGGTCCTTACTTCCTAT-GCCACCATTGATTT 2008 Query 1488 TTCTAGAAATCTA-CTTGAAGGAAATATTCCTGAATCCATTGGACTTTTAAAGGCATTGA 1546 |||| | || | | ||||||||| | ||||| ||||||||||| | ||| |||||||||| Sbjct 2009 TTCTGGGAA-CAAACTTGAAGGACAGATTCCCGAATCCATTGGTCATTTGAAGGCATTGA 2067 Query 1547 TTGCACTAAACTTATCGAACAACGCTTTTACAGGCCATATTCCTC-AGTCTTTGGCAAAT 1605 ||||||| |||||||| |||||||| || |||||||||||||||| | ||||||||||| Sbjct 2068 TTGCACTCAACTTATCAAACAACGCATTCACAGGCCATATTCCTCCA-TCTTTGGCAAA- 2125 Query 1606 CTT-A-AGGAGCTCCAGTCACTAGACATGTCTAGGAACCAACTCTCAGGGACTATTCCTA 1663 | | | || |||| ||||||||||| | || || |||||||| || |||| |||||||| Sbjct 2126 CGTGACAG-AGCTGGAGTCACTAGACCTCTCAAGAAACCAACTGTCCGGGAATATTCCTA 2184 Query 1664 ATGGACTCAAGCAAC-TCTCGTTTTTGGCTTACATAAGTGTGTCTCATAACCAACTCA-A 1721 | |||||| | | | ||||||||||||| |||||||||||| | ||||||||||||| | Sbjct 2185 AAGGACTCGGG-AGCCTCTCGTTTTTGGCGTACATAAGTGTGGCCCATAACCAACTCACA 2243 Query 1722 GGGTGAAATACCACAAGGAACACAAATTACTGGGCAAT-TGAAATCTTCCTTTGAAGGGA 1780 || ||||||||||||||| |||||||| |||||||||| | ||||| ||||||||||||| Sbjct 2244 GG-TGAAATACCACAAGGGACACAAATCACTGGGCAATCT-AAATCCTCCTTTGAAGGGA 2301 Query 1781 ATGTAGGACTTTGTGGTCTTCCTCTCGAGGAAAGGTGCTTCGACAATAGTGCATCTCCAA 1840 ||| ||| ||||||||||||||| | ||||| | ||||| | | || ||| | |||| Sbjct 2302 ATGCAGGGCTTTGTGGTCTTCCTTTGGAGGAGACTTGCTTTGGGAGTAATGCGCCACCAA 2361 Query 1841 CGCAGCA-CCACAAGCAAGACgaagaagaagaagaagaaCAAGTGTTACACTGGAAAGCG 1899 | || || || ||| |||| || |||||||| | |||||||||||| |||||||||| Sbjct 2362 CACAACAGCCT-AAGGAAGAAGACGAAGAAGA-G--GAACAAGTGTTAAACTGGAAAGCA 2417 Query 1900 GTGGCA-ATGGGGTATGGACCTGGATTGTTGGTT-GGATTTGCAATTGCATATGTCATTG 1957 || | || |||||||| |||||| || || || || || | ||| ||| | || |||| Sbjct 2418 ATG-CTTATAGGGTATGGGCCTGGACTGCTG-TTCGGGTTGGTAATAGCACACGTTATTG 2475 Query 1958 CTTCATACAAGCCGGAGTGG 1977 |||||||||||||| ||||| Sbjct 2476 CTTCATACAAGCCGAAGTGG 2495 > Ahg497402 jgi|Araly1|497402|fgenesh2_kg.348__3__AT2G33060.1 Length=1952 Score = 556 bits (301), Expect = 2e-157 Identities = 698/882 (79%), Gaps = 57/882 (6%) Strand=Plus/Plus Query 1117 GACAACAACAGAATCAAAGACACATTTCCTTTCTGGCTCAAGGCTTTACCAAAGTTACAA 1176 ||| |||||||||||||||||||||||||||||||||| ||||||||||| | |||||| Sbjct 898 GACCACAACAGAATCAAAGACACATTTCCTTTCTGGCTTAAGGCTTTACCTGATTTACAA 957 Query 1177 G-TCCTTACCCTAAGTTCAAACAAGTTTT-ATGGTCCTATATCTCCTCCTCATCAAGGTC 1234 | || ||||||| |||||||||| ||| |||| ||||| | | ||||| ||| ||||| Sbjct 958 GCTC-TTACCCTCCGTTCAAACAA-TTTCCATGGCCCTATCTATACTCCTGATCGAGGTC 1015 Query 1235 CTCTCGGGTTTCC-AGAGCTGAGAATACTTGAGATATCTGATAATAAGTTTACT-GGAAG 1292 |||| | |||||| | ||||| | |||||||| ||| | ||||| || ||| | ||||| Sbjct 1016 CTCTTGCGTTTCCCA-AGCTGCGCATACTTGAAATAGCAGATAACAACCTTA-TAGGAAG 1073 Query 1293 CTTGTCGTCAAGAT-ACTTTGAGAATTGGAAAGCATCGTC-CGCCATGATGAATGAATAT 1350 |||| | ||| || |||||| ||||||| ||||||| || | ||| ||||||||| || Sbjct 1074 CTTGCCACCAA-ATTACTTTGTGAATTGGGAAGCATCATCACTCCAC-ATGAATGAAGAT 1131 Query 1351 GTGG-GTTTATATATGGTTTACGAGAAGAATCCTTA-TGGTGTAGT-TGTCTATACCTTT 1407 | || | | ||||||| | || | || |||||||| | | || | || |||| Sbjct 1132 G-GGAGAATCTATATGGGTGACTACAACAATCCTTACTA-TATA-TATGAAGATACA--- 1185 Query 1408 TTGGATCGTATAGATTTGAAATACAAAGGTCTAAACATGGAGCAAGCGAG-GGTTCTCAC 1466 | | | |||||| |||||||||||||| ||||||||||| || ||| || || Sbjct 1186 --G--T-G----GATTTGCAATACAAAGGTCTATTCATGGAGCAAG-GAAAGGTCCTTAC 1235 Query 1467 TTCCTACAGCG-CCATTGATTTTTCTAGAAATCTA-CTTGAAGGAAATATTCCTGAATCC 1524 |||||| || |||||||||||||| | || | | ||||||||| | ||||| |||||| Sbjct 1236 TTCCTAT-GCCACCATTGATTTTTCTGGGAA-CAAACTTGAAGGACAGATTCCCGAATCC 1293 Query 1525 ATTGGACTTTTAAAGGCATTGATTGCACTAAACTTATCGAACAACGCTTTTACAGGCCAT 1584 ||||| | ||| ||||||||||||||||| |||||||| |||||||| || ||||||||| Sbjct 1294 ATTGGTCATTTGAAGGCATTGATTGCACTCAACTTATCAAACAACGCATTCACAGGCCAT 1353 Query 1585 ATTCCTC-AGTCTTTGGCAAATCTT-A-AGGAGCTCCAGTCACTAGACATGTCTAGGAAC 1641 ||||||| | ||||||||||| | | | || |||| ||||||||||| | || || ||| Sbjct 1354 ATTCCTCCA-TCTTTGGCAAA-CGTGACAG-AGCTGGAGTCACTAGACCTCTCAAGAAAC 1410 Query 1642 CAACTCTCAGGGACTATTCCTAATGGACTCAAGCAAC-TCTCGTTTTTGGCTTACATAAG 1700 ||||| || |||| ||||||||| |||||| | | | ||||||||||||| |||||||| Sbjct 1411 CAACTGTCCGGGAATATTCCTAAAGGACTCGGG-AGCCTCTCGTTTTTGGCGTACATAAG 1469 Query 1701 TGTGTCTCATAACCAACTCA-AGGGTGAAATACCACAAGGAACACAAATTACTGGGCAAT 1759 |||| | || |||||||||| ||| ||||||||| ||||| |||||||| |||||||||| Sbjct 1470 TGTGGCCCACAACCAACTCACAGG-TGAAATACCGCAAGGGACACAAATCACTGGGCAAT 1528 Query 1760 -TGAAATCTTCCTTTGAAGGGAATGTAGGACTTTGTGGTCTTCCTCTCGAGGAAAGGTGC 1818 | ||||| |||||||||||||||| ||| ||||||||||||||| | ||||| | ||| Sbjct 1529 CT-AAATCCTCCTTTGAAGGGAATGCAGGGCTTTGTGGTCTTCCTTTGGAGGAGACTTGC 1587 Query 1819 TTCGACAATAGTGCATCTCCAACGCAGCA-CCACAAGCAAGACgaagaagaagaagaaga 1877 || | | || ||| | ||||| || || || ||| |||| || |||||||| | || Sbjct 1588 TTTGGGAGTAATGCGCCACCAACACAACAGCCT-AAGGAAGAAGACGAAGAAGA-G--GA 1643 Query 1878 aCAAGTGTTACACTGGAAAGCGGTGGCA-ATGGGGTATGGACCTGGATTGTTGGTT-GGA 1935 |||||||||| |||||||||| || | || |||||||| |||||| || || || || Sbjct 1644 ACAAGTGTTAAACTGGAAAGCAATG-CTTATAGGGTATGGGCCTGGACTGCTG-TTCGGG 1701 Query 1936 TTTGCAATTGCATATGTCATTGCTTCATACAAGCCGGAGTGG 1977 || | ||| ||| | || |||||||||||||||||| ||||| Sbjct 1702 TTGGTAATAGCACACGTTATTGCTTCATACAAGCCGAAGTGG 1743 > Ahg480073 jgi|Araly1|480073|fgenesh2_kg.3__2774__AT3G24982.1 Length=2686 Score = 274 bits (148), Expect = 2e-72 Identities = 295/362 (81%), Gaps = 25/362 (7%) Strand=Plus/Plus Query 24 TTTGCGTTTGCATTTTCTCTCGCTACTCTTACTTTGTTGTGTCTCCCCTTCAAGCTTTGT 83 |||||||||| ||||||| | ||||||||| || | ||||||||||||||||||| | Sbjct 65 TTTGCGTTTGAATTTTCTTTTGCTACTCTTGCTCTCTTGTGTCTCCCCTTCAAGC---CT 121 Query 84 CATTATAAGATTCATTACACATAATCATTTTGATGGTC-TAGTACGTTGTCATCCCCACA 142 | || | | | || | |||| | | ||| ||||| | || | |||| ||||||| Sbjct 122 C-TT-CACG--T--TT--A-ATAACCCTGTTGTTGGTCTTGGTGC-TTGTGGTCCCCACC 171 Query 143 AGTTTCAAGCCCTTACGCAGTTCAAGAACGAGTTTGATACCCGC-CGTTGCAACCACAGT 201 || |||||||| |||||||||||||||||||||||||||| || | ||||||||| ||| Sbjct 172 AGATTCAAGCCTTTACGCAGTTCAAGAACGAGTTTGATACTCGTGC-TTGCAACCATAGT 230 Query 202 AACTACTTT-AATGGAATCTGGTGTGATAACTCCAAGGTGC--GGTCACAAAGCTACGAC 258 || ||| |||||| | ||||| |||||||||| || || |||||| |||||||||| Sbjct 231 GACC-CTTGGAATGGAGTGTGGTGCGATAACTCCACGG-GCACGGTCACGAAGCTACGAC 288 Query 259 TACGGGAC-TGTCTCAGTGGAACTCTCAAATCAAACAGTAGCCTCTTCCAGTTTCATCAT 317 | |||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 289 T-CGGGGCCTGTCTCAGTGGAACTCTGAAATCCAACAGTAGCCTCTTCCAGTTTCATCAT 347 Query 318 CTTCG-CTACCTTGATCTCTCTCACAACAACTTCACCTCCTCTTCCCTCCCTTCCGAGTT 376 ||||| | ||||| ||||||||||||||| |||||| ||||||| ||| |||| |||| Sbjct 348 CTTCGTC-ACCTTTCTCTCTCTCACAACAAATTCACCCCCTCTTCAATCCTTTCCAAGTT 406 Query 377 TG 378 || Sbjct 407 TG 408 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 75799587550 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5