BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G25520.1
Length=1530
Score E
Sequences producing significant alignments: (Bits) Value
Ahg932703 jgi|Araly1|932703|scaffold_400691.1 1834 0.0
Ahg944722 jgi|Araly1|944722|scaffold_700951.1 1053 0.0
Ahg942103 jgi|Araly1|942103|scaffold_602647.1 965 0.0
Ahg940598 jgi|Araly1|940598|scaffold_601142.1 845 0.0
> Ahg932703 jgi|Araly1|932703|scaffold_400691.1
Length=1087
Score = 1834 bits (993), Expect = 0.0
Identities = 1053/1082 (97%), Gaps = 3/1082 (0%)
Strand=Plus/Plus
Query 100 CCGGCGAAAACAAAC-CCACCGCCATGGGGAAAGGTCGTGCACTTTCCGACGGAGTGATC 158
|||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1 CCGGCGAAAA-AAACACCACCACCATGGGGAAAGGTCGTGCACTTTCCGACGGAGTGATA 59
Query 159 AAAAAGATCATCCTTTCATACACCTATGTCGCAATCTGGATCTTCCTCAGCTTCACAGTC 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 AAAAAGATCATCCTTTCATACACCTATGTCGCAATCTGGATCTTCCTCAGCTTCACAGTC 119
Query 219 ATCGTCTACAACAAATACATCCTCGACAAGAAGATGTATAATTGGCCATTCCCAATAACT 278
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 120 ATCGTCTACAACAAATACATCCTCGACAAGAAGATGTATAATTGGCCATACCCAATAACT 179
Query 279 CTCACCATGATCCACATGGGTTTTTGCTCTTCCTTAGCTGTGATTCTCATCAAAGTCTTC 338
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 CTCACCATGATTCACATGGGTTTTTGCTCTTCCTTAGCTGTGATTCTCATCAAAGTCTTC 239
Query 339 AAAGTCGTCGAGCCTGTTTCAATGTCACGCGAGACTTATCTCAGATCCGTCGTACCAATC 398
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 AAAGTCGTCGAGCCAGTTTCAATGTCACGCGAGACTTATCTCAGATCCGTCGTACCAATC 299
Query 399 GGCGCGTTGTACTCACTTTCTCTCTGGTTATCAAACTCTGCTTACATCTACCTCTCTGTT 458
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 300 GGCGCGTTGTACTCACTCTCTCTTTGGTTATCAAACTCTGCTTACATCTACCTCTCTGTA 359
Query 459 TCCTTCATTCAAATGCTCAAAGCCCTAATGCCTGTAGCAGTTTACTCAATCGGGGTTTTG 518
||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||
Sbjct 360 TCCTTCATTCAAATGCTCAAAGCTCTAATGCCTGTAGCTGTTTACTCAATCGGAGTTTTG 419
Query 519 TTGAAGAAAGAGACTTTCAAATCTCAGACTATGACTAACATGCTTTCGATCTCGTTTGGT 578
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 420 TTAAAGAAAGAGACTTTCAAATCTCAGACTATGACTAACATGCTCTCGATCTCGTTTGGT 479
Query 579 GTTGCTATTGCTGCTTATGGTGAAGCTAAGTTTGATGGTTGGGGTGTTTTTCTTCAGCTT 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 GTTGCTATTGCTGCTTATGGTGAAGCTAAGTTTGATGGTTGGGGTGTTTTTCTTCAGCTT 539
Query 639 GGTGCTGTTGCTTTTGAAGCCACTAGGTTGGTTTTGATTCAGATCTTGCTTACTTCTAAA 698
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 540 GGTGCTGTTGCTTTTGAAGCTACAAGGTTGGTTTTGATTCAGATCTTGCTTACTTCTAAA 599
Query 699 GGAATCAATCTAAATCCAATCACTTCTCTCTATTACGTTGCTCCTTGTTGTTTGGTTTTC 758
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 GGAATCAATCTTAATCCAATCACTTCTCTCTATTACGTTGCTCCTTGTTGTTTGGTTTTC 659
Query 759 CTCTCTGTTCCTTGGATCTTTGTGGAGTTTCCAGTTCTTAGAGATACTTCGAGTTTCCAT 818
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 CTCTCTGTGCCTTGGATCTTTGTGGAGTTTCCAGTTCTTAGAGATACTTCGAGTTTCCAT 719
Query 819 TTCGATTTCGTGATCTTTGGAACCAATTCTGTTTGTGCGTTTGCTTTGAATCTTGCTGTG 878
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TTCGATTTCTTGATCTTTGGAACCAATTCTGTTTGTGCGTTTGCTTTGAATCTTGCTGTG 779
Query 879 TTCTTGCTCGTTGGGAAAACCTCTGCTTTGACTATGAATGTGGCTGGTGTGGTTAAGGAT 938
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||
Sbjct 780 TTCTTGCTCGTTGGGAAAACCTCTGCTTTGACAATGAATGTGGCTGGTGTTGTTAAAGAT 839
Query 939 TGGCTCTTGATTGCATTCTCGTGGTCGGTGATTAAGGACACGGTCACACCTATCAATCTG 998
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 840 TGGCTCTTGATTGCATTCTCGTGGTCGGTGATTAAGGACACGGTCACACCGATCAATCTG 899
Query 999 TTTGGTTATGGACTTGCCTTTTTGGGTGTTGGATATTACAATCACTGCAAGTTACAGGCG 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 TTTGGTTATGGACTTGCCTTTTTGGGTGTTGGATATTACAATCACTGCAAGTTACAGGCG 959
Query 1059 TTGAAGGCTAAAGATGCACAGAAGAAGGTTCAGGCAAGTGATGACGAAGCTGGGAAGCTT 1118
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 960 TTGAAAGCTAAAGATGCACAGAAGAAGGTTCAGGCAAGTGATGAGGAAGCTGGGAAGCTT 1019
Query 1119 TTGGAAGAGAGGGAAAGTGAAGCTAAACGCAACGAAACCCAAGATTGATCTG-TTCTGAT 1177
||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||
Sbjct 1020 TTGGAAGAGAGGGAAAGTGAAGCTAAACGAAACGAAACACAAGATTGATCTGATTCTGAT 1079
Query 1178 TC 1179
||
Sbjct 1080 TC 1081
> Ahg944722 jgi|Araly1|944722|scaffold_700951.1
Length=1093
Score = 1053 bits (570), Expect = 0.0
Identities = 887/1038 (85%), Gaps = 29/1038 (3%)
Strand=Plus/Plus
Query 121 CCATGGGGAAAGGTC-GTGCACTTTCCGACGGAGTGATCAAAAAGATCATCCTTTCATAC 179
||||||| ||||| | |||| ||| ||| ||||| ||||| |||||| |||| || |||
Sbjct 19 CCATGGGAAAAGG-CGGTGCGCTTAGCGATGGAGTCATCAAGAAGATCCTCCTCTCCTAC 77
Query 180 ACCTATGTCGCAATCTGGATCTTCCTCAGCTTCACAGTCATCGTCTACAACAAATACATC 239
||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 78 ACCTACGTCGCGATCTGGATCTTCCTCAGCTTCACCGTCATCGTCTACAACAAATACATC 137
Query 240 CTCGACAAGAAGATGTATAATTGGCCATTCCCAATAACTCTCACCATGATCCACATGGGT 299
||||||||||||||||| |||||||| || || || || ||||||||||||||||||| |
Sbjct 138 CTCGACAAGAAGATGTACAATTGGCCTTTTCCGATCACACTCACCATGATCCACATGGCT 197
Query 300 TTTTGCTCTTCCTTAGCTGTGATTCTCATCAAAGTCTTCAAAGTCGTCGAGCCTGTTTCA 359
|||||||||||| | || || || |||||||||||||||||| |||||||||||||||||
Sbjct 198 TTTTGCTCTTCCCTCGCCGTCATCCTCATCAAAGTCTTCAAAATCGTCGAGCCTGTTTCA 257
Query 360 ATGTCACGCGAGACTTATC-TCAGATCCGTCGTACCAATCGGCGCGTTGTACTCACTTTC 418
|||||||| |||||||| | ||||||| || || || ||||| || |||||||| || ||
Sbjct 258 ATGTCACGAGAGACTTA-CATCAGATCTGTAGTCCCGATCGGTGCTTTGTACTCGCTCTC 316
Query 419 TCTCTGGTTATCAAACTCTGCTTACATCTACCTCTCTGTTTCCTTCATTCAAATGCTCAA 478
||||||| | || || || |||||||| |||||||| || ||||||||||| ||||| ||
Sbjct 317 TCTCTGGCTCTCCAATTCCGCTTACATTTACCTCTCCGTCTCCTTCATTCAGATGCTTAA 376
Query 479 AGCCCTAATGCCTGTAGCAGTTTACTCAATCGGGGTT-TTGTTGAAGAAAGAGA-CTTTC 536
||||||||||||||| || |||||||||||||| || || || |||||||| | |||||
Sbjct 377 AGCCCTAATGCCTGTCGCTGTTTACTCAATCGGAGTCCTTCTT-AAGAAAGA-ATCTTTC 434
Query 537 AAATCTCAGACTATGACTAACATGCTTTCGATCTCGTTT-GGTGTTGCTATTGCTGCTTA 595
||||| |||| |||||||||||||| |||||||| ||| ||||| || |||||||||||
Sbjct 435 AAATCGGAGACGATGACTAACATGCTCTCGATCTC-TTTCGGTGTCGCGATTGCTGCTTA 493
Query 596 TGGTGAAGCTAAGTTTGATGGTTGGGGTGTTTTTCTTCAGCTTGGTGCTGTTGCTTTTGA 655
||||| ||||| || ||| ||||| || | |||||||||||||| || ||||||||
Sbjct 494 CGGTGAGGCTAAATTCGATACCTGGGGAGTCATGCTTCAGCTTGGTGCCGTAGCTTTTGA 553
Query 656 AGCCACTAGGTTGGTTTTGATTCAGATCTTGCTTACTTCTAAAGGAATCAATCTAAATCC 715
|| || |||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 554 GGCAACGAGGTTGGTTTTGATTCAGATCTTGCTCACTTCTAAAGGAATCAATCTTAATCC 613
Query 716 AATCACTTCTCTC-TATTACGTTGCTCCTTGTTGTTTGGTTTTCCTCTCTGTTCC-TTGG 773
||||||||| || || ||||| ||||||||||||||||| ||||||| | |||| ||||
Sbjct 614 AATCACTTC-CTTGTACTACGTCGCTCCTTGTTGTTTGGTCTTCCTCTTT-TTCCCTTGG 671
Query 774 ATCTTTGTGGAGTTTCC-AGTTCTTAGAG-A-TACTTCGAGTTTCCATTTCGATTTCGTG 830
||||| || || | || | |||||| || | | | ||||||||||| ||||||||||||
Sbjct 672 ATCTTCGTTGAACTCCCGA-TTCTTA-AGGAAT-CATCGAGTTTCCACTTCGATTTCGTG 728
Query 831 ATCTTT-GGAACCAATTCTGTTTGTGCGTTTGCTTTGAATCTTGCTGTGTTC-TTGCTCG 888
|| ||| || || ||||| || ||||| ||||||||||| || ||||||||| || ||||
Sbjct 729 AT-TTTCGGGACTAATTCCGTATGTGCATTTGCTTTGAACCTCGCTGTGTTCCTT-CTCG 786
Query 889 TTGGGAAAACCTCTGCTTTGACTATGAATGTGGCTGGTGTGGTTAAGGATTGGCTCTTGA 948
|||| |||||||| ||||| || |||||||| ||||||||||||||||||||||| ||||
Sbjct 787 TTGGAAAAACCTCGGCTTTAACGATGAATGTTGCTGGTGTGGTTAAGGATTGGCTTTTGA 846
Query 949 TTGCATTCTCGTGGTCGGTGATTAAGGACACGGTCACACCTATCAATCTGTTTGGTTATG 1008
|||| ||||| ||||| |||||||| || ||||| || || | ||||| || ||||| |
Sbjct 847 TTGCCTTCTCTTGGTCTGTGATTAAAGATACGGTTACTCCGCTTAATCTCTTCGGTTACG 906
Query 1009 GACTTGCCTTTTTGGGTGTTGGATATTACAATCACTGCAAGTTACAGGCGTTGAAGGCTA 1068
| ||||| || |||||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct 907 GGCTTGCGTTCTTGGGTGTTGCCTATTACAATCACTGCAAGTTGCAGGCTTTGAAGGCTA 966
Query 1069 AAGATGCACAGAAGAAGGTTCAGGCAAG-TGATGACGAAGCTG--GG-AAGCTTTTGGAA 1124
||||||| ||||||||||||||| ||| |||||| ||||||| || ||||||||||||
Sbjct 967 AAGATGCTCAGAAGAAGGTTCAG-CAATCTGATGAAGAAGCTGCTGGGAAGCTTTTGGAA 1025
Query 1125 GAGAGGGAAAGTGAAGCT 1142
||||||||||||||||||
Sbjct 1026 GAGAGGGAAAGTGAAGCT 1043
> Ahg942103 jgi|Araly1|942103|scaffold_602647.1
Length=1090
Score = 965 bits (522), Expect = 0.0
Identities = 862/1025 (84%), Gaps = 28/1025 (3%)
Strand=Plus/Plus
Query 123 ATGGGGAAAGGTCG-TGCACTTTCCGACGGAGTGATCAAAAAGATCATCCTTTCATACAC 181
|||||||||||| | | |||| ||| || ||||| || || || ||| | || |||||
Sbjct 21 ATGGGGAAAGGTGGAT-CACTAAGCGAAGGTGTGATTAAGAACATAATCATCTCCTACAC 79
Query 182 CTATGTCGCAATCTGGATCTTCCTCAGCTTCACAGTCATCGTCTACAACAAATACATCCT 241
|| || ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 80 ATACGTAGCAATATGGATCTTCCTAAGCTTCACCGTCATCGTCTACAACAAATACATCCT 139
Query 242 CGACAAGAAGATGTATAATTGGCCATTCCCAATAACTCTCACCATGATCCACATGGGTTT 301
||||||||||||||| |||||||||||||| || | |||||||||||||||||| ||
Sbjct 140 CGACAAGAAGATGTACAATTGGCCATTCCCGATCTCACTCACCATGATCCACATGTCCTT 199
Query 302 TTGCTCTTCCTTAGCTGTGATTCTCATCAAAGTCTTCAAAGTCGTCGAGCCTGTTTCAAT 361
|||||| || ||||| | |||||||||| ||||||||| | || || || || |||||
Sbjct 200 TTGCTCAACCCTAGCTTTTCTTCTCATCAAGGTCTTCAAATTTGTTGAACCGGTCTCAAT 259
Query 362 GTCACGCGAGACTTATCTCAGATCCGTCGTACCAATCGGCGCGTTGTACTCACTTTCTCT 421
|||||| || |||||||||||||||||||| || |||||||||||||| ||||| |||||
Sbjct 260 GTCACGTGACACTTATCTCAGATCCGTCGTCCCGATCGGCGCGTTGTATTCACTCTCTCT 319
Query 422 CTGGTTATCAAACTCTGCTTACATCTACCTCTCTGTTTCCTTCATTCAAATGCTCAAAGC 481
||| | || ||||| || ||||| ||||||||||| |||||||||||||||||||||||
Sbjct 320 TTGGCTCTCTAACTCAGCCTACATTTACCTCTCTGTCTCCTTCATTCAAATGCTCAAAGC 379
Query 482 CCTAATGCCTGTAGCAGTTTACTCAATCGGGGTTTTGTTGAAGAAAGAGACTTTCAAATC 541
||||||| || || ||||| ||||| || || | || ||||||||| |||||||||
Sbjct 380 GTTAATGCCAGTCGCGGTTTATTCAATTGGCGTGCTCTTCAAGAAAGAGGGTTTCAAATC 439
Query 542 TCAGACTATGACTAACATGCTTTCGATCTCGTTTGGTGTTGCTATTGCTGCTTATGGTGA 601
| |||| |||| ||||||||| |||||||| |||||||| || |||||||||||||||||
Sbjct 440 TGAGACAATGATTAACATGCTATCGATCTCATTTGGTGTAGCCATTGCTGCTTATGGTGA 499
Query 602 AGCTAAGTTT-GATGGTTGGGGTGTTTTTCTTCAGCTTGGTGCTGTTGCTTTTGAAGCCA 660
| ||| | || |||| ||||||||| |||| ||||||||||| |||||||| || || |
Sbjct 500 ATCTA-GATTCGATGTTTGGGGTGTGATTCTCCAGCTTGGTGCGGTTGCTTTCGAGGCGA 558
Query 661 CTA-GGTTGGTTTTGATTCAGATCTTGCTTACTTCTAAAGGAATCAA-TCTAAATCCAAT 718
| | ||||||| ||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct 559 C-ACGGTTGGTAATGATTCAGATCTTGCTTACTTCTAAAGGAATCACGT-TGAATCCAAT 616
Query 719 CACTTCTCTCTATTACGTTGCTCCTTGTTGTTTGGTTTTCCTCTCTGTTCCTTGGATCTT 778
||||||||| |||||||||||||||||||| || | |||| | | | | |||||||| |
Sbjct 617 CACTTCTCTTTATTACGTTGCTCCTTGTTGCTTAGCTTTCTTGTTTATCCCTTGGAT-TG 675
Query 779 T-GTGGAGTTTCCAGTTCTT-AGAGATACTTCGAGTTTCCATTTCGATTTCGTGATCTTT 836
| ||||||||||| | |||| |||||||| || || ||||||||||||| | | || |||
Sbjct 676 TCGTGGAGTTTCC-GATCTTGAGAGATACCTCTAGCTTCCATTTCGATTACCTCAT-TTT 733
Query 837 -GGAACCAATTCTGTTTGTGCGTTTGCTTTGAATCTTGCTGTGTT-CTTGCTCGTTGGGA 894
|| || |||||| ||||||||||||||||||||||||||||||| ||| || |||||||
Sbjct 734 CGGGACGAATTCTTTTTGTGCGTTTGCTTTGAATCTTGCTGTGTTTCTT-CTGGTTGGGA 792
Query 895 AAACCTCTGCTTTGACTATGAATGTGGCTGGTGTGGTTAAGGATTGGCTCTTGATTGCAT 954
|||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| || |
Sbjct 793 AAACCTCTGCTTTGACCATGAATGTTGCTGGTGTGGTTAAGGACTGGCTCTTGATCGCCT 852
Query 955 TCTCGTGGTCGGTGATTAAGGACACGGTCACACCTATCAATCTGTTTGGTTATGG-ACTT 1013
| ||||||||||| ||||||||||| || || ||||| ||||| ||||||||||| | ||
Sbjct 853 TTTCGTGGTCGGTCATTAAGGACACTGTGACTCCTATTAATCTTTTTGGTTATGGGA-TT 911
Query 1014 GCCTTT-TTGGGTGTTG-GATATTACAATCACTGC-AAGTTACAGGCGTTGAAGGCTAAA 1070
|| ||| |||||||||| | || || |||||| || |||||||| || ||||||||||||
Sbjct 912 GC-TTTCTTGGGTGTTGCG-TACTATAATCAC-GCGAAGTTACAAGCATTGAAGGCTAAA 968
Query 1071 GATGCACAGAAGAAGGTTCAGGCAAGT-GATGACGA-AGCTGGGAAGCTTTTGGAAGAGA 1128
||||| ||||||| | |||| ||||| ||||| || || ||| |||||||||||| |
Sbjct 969 GATGCTCAGAAGACTGCTCAG-CAAGTTGATGAAGAGAG-TGGTCGGCTTTTGGAAGAAA 1026
Query 1129 GGGAA 1133
|||||
Sbjct 1027 GGGAA 1031
> Ahg940598 jgi|Araly1|940598|scaffold_601142.1
Length=1095
Score = 845 bits (457), Expect = 0.0
Identities = 855/1043 (82%), Gaps = 43/1043 (4%)
Strand=Plus/Plus
Query 119 CGCCATGGGGAAAGGTC-GTGCACTTTCCGACGGAGTGATCAAA-AAGATCATCCTTTCA 176
||| ||||||||||| | | ||||| ||| | ||||| ||| || || | || |||
Sbjct 18 CGCAATGGGGAAAGG-CGGCGCACTAAGCGAAAGCGTGAT-AAAGAACATTGTTCTCTCA 75
Query 177 TACACCTATGTCGCAATCTGGATCTTCCTCAGCTTCACAGTCATCGTCTACAACAAATAC 236
|||| ||| || || || ||||||||| | |||||||| || ||||||||||||||||||
Sbjct 76 TACAGCTACGTAGCGATATGGATCTTCTTAAGCTTCACGGTAATCGTCTACAACAAATAC 135
Query 237 ATCCTCGACAAGAAGATGTATAATTGGCCATTCCCAATAACTCTCACCATGATCCACATG 296
|||||||||||||||||||| |||||||||||||| || | ||||||||||||||||||
Sbjct 136 ATCCTCGACAAGAAGATGTACAATTGGCCATTCCCGATCTCACTCACCATGATCCACATG 195
Query 297 GGTTTTTGCTCTTCCTTAGCTGTGATTCTCATCA--AAG-TCTTCAAAGTCGTCGAGCCT 353
|||||||| || ||||| | ||||||||| ||| | |||||| |||||||||||
Sbjct 196 TCCTTTTGCTCAACCCTAGCT-T--TTCTCATCATCAAGGTTTTCAAATTCGTCGAGCCT 252
Query 354 GTTTCAATGTCACGCGAGACTTATCTCAGATCCGTCGTACCAATCGGCGCGTTGTACTCA 413
||| |||| | ||||||||||| || ||||||||||| || ||||| || |||||| |
Sbjct 253 GTTAAAATGACTCGCGAGACTTACCTGAGATCCGTCGTCCCGATCGGTGCTTTGTACGCT 312
Query 414 CTTTCTCTCTGGTTATCAAACTCTGCTTACATCTACCTCTCTGTTTCCTTCATTCAAATG 473
|| || ||||||||||| || || |||||||| ||||| || || ||||| || || |||
Sbjct 313 CTATCACTCTGGTTATCGAATTCCGCTTACATTTACCTATCAGTCTCCTTTATCCAGATG 372
Query 474 CTCAAAGCCCTAATGCCTGTAGCAGTTTACTCAATCGGGGTTTTGTTGAAGAAAGA-GAC 532
|| ||||| || |||||||| || |||||||| ||||| ||| |||| ||||| || |
Sbjct 373 CTTAAAGCTCTGATGCCTGTCGCTGTTTACTCGATCGGTGTTCTGTTCAAGAAGGAAGG- 431
Query 533 TTTCAAATCTCAGACTATGACT-AACATGCTTTCGATCTCGTTTGGTGTTGCTATTGCTG 591
|||||||||| | ||||||| | || ||||| ||||| |||||||||||||| |||||||
Sbjct 432 TTTCAAATCTGATACTATGA-TGAATATGCTCTCGATTTCGTTTGGTGTTGCGATTGCTG 490
Query 592 CTTATGGTGAAGCTAAGTTTGATGGTTGGGGTGTTTTTCTTCAGCTTGGTGCTGTTGCTT 651
||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 491 CTTATGGAGAAGCTAGGTTTGATGTTTGGGGTGTGATTCTTCAGCTTGGTGCTGTTGCTT 550
Query 652 TTGAAGCCACTAGGTTGGTTTTGATTCAGATCTTGCTTACTTCTAAAGGAATCAATCTAA 711
||||||||||| | |||||||||||||||||||| ||| |||||| || || || |
Sbjct 551 TTGAAGCCACTCGTTTGGTTTTGATTCAGATCTTACTTGGGGATAAAGGGATTAAGCTTA 610
Query 712 ATCCAATCACTTC-TCTCTATTACGTTGCTCCTTGTTGTTTGGTTTTCCTCTCTGTTCCT 770
|||| || ||||| | | |||||||||||||||||||| || | |||| | | | ||||
Sbjct 611 ATCCCATTACTTCGT-TATATTACGTTGCTCCTTGTTGCTTAGCTTTCTTGTTTATTCCA 669
Query 771 TGGATCTTTGTGGAGTTTCCAGTTCTTAGAGATACTTCGAG-TTTCCATTTCGATTTCGT 829
||||||| || |||||||| |||||||||||||| || || |||| | || |||| ||
Sbjct 670 TGGATCTACGTTGAGTTTCCGGTTCTTAGAGATACGTCTAGCTTTC-ACTTGGATTACGC 728
Query 830 GATCTTT-GGAACCAATTCTGTT-TGTGCGTTTGCTTTGAATCTTGCTGTGTTC-TTGCT 886
| | ||| || | ||||| ||| ||||||||||| |||||||||||||||||| || |
Sbjct 729 GGT-TTTCGGGGCGAATTC-GTTCTGTGCGTTTGCGTTGAATCTTGCTGTGTTCCTTT-T 785
Query 887 CGTTGGGAAAACCTCTGCTTTGACTATGAATGTGGCTGGTGTGGTTAAGGATTGGCTCTT 946
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 786 GGTTGGGAAAACCTCTGCTTTGACTATGAATGTTGCTGGTGTGGTTAAGGATTGGCTCTT 845
Query 947 GATTGCATTCTCGTGGTCGGTGATTAAGGACACGGTCACACCTATCAATCTGTTT-GGTT 1005
|||||| ||||| ||||| ||||||||||| || || || ||||| || || ||| || |
Sbjct 846 GATTGCTTTCTCTTGGTCTGTGATTAAGGATACTGTGACTCCTATTAACCT-TTTCGGGT 904
Query 1006 ATGG-ACTTGCCTTTTTGGGTGTTG-GATATTACAATCACTGC-AAGTTACAGGCGTTGA 1062
| || | |||| |||||||| |||| | |||||||| ||| || ||||||||||| ||||
Sbjct 905 ACGGGA-TTGCGTTTTTGGGAGTTGCG-TATTACAACCAC-GCGAAGTTACAGGCCTTGA 961
Query 1063 AGGCTAAAGATGC--ACA-GAAGAAGGTTCAGGCAAG-TGATGACGA-AGCTGGGAAGCT 1117
|||||||||| | | | ||||||||||||| |||| |||||| || || ||| | |
Sbjct 962 AGGCTAAAGAGGAGGAGAAGAAGAAGGTTCAG-CAAGCTGATGAGGAGAG-TGGTCGG-T 1018
Query 1118 T--TTGGAAGAGAGGGAAAGTGA 1138
| ||| ||||||||||| ||||
Sbjct 1019 TGCTTG-AAGAGAGGGAAGGTGA 1040
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57287728480
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5