BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G27150.1
Length=4344
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481603 jgi|Araly1|481603|fgenesh2_kg.4__663__AT2G27150.1 3786 0.0
Ahg470440 jgi|Araly1|470440|fgenesh2_kg.1__394__AT1G04580.1 2510 0.0
> Ahg481603 jgi|Araly1|481603|fgenesh2_kg.4__663__AT2G27150.1
Length=4259
Score = 3786 bits (2050), Expect = 0.0
Identities = 2390/2553 (94%), Gaps = 27/2553 (1%)
Strand=Plus/Plus
Query 1803 GCATAACAACAGCCATGTTGATACCGTAAAATCTCTTCCCTTCCTCTCATCTTCACAGCA 1862
||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||||| ||
Sbjct 1723 GCATAGCAACAGCCATGTCGATACCGCAAAATCTCTACCCTTCCTCTCATCTTCACAACA 1782
Query 1863 AGTATTAGAGAGCAATGAATTTAAACCTATTGGTGAAGCAGTTATCAAAGTTGGAGCTGC 1922
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1783 AGTGTTAGAGAGCAATGAATTTCAACCTATTGGTGAAGCAGTTATCAAAGTTGGAGCTGC 1842
Query 1923 CTTACAAGCTTCTGGTGAGGCGGTTTTTGTTGATGATATACCGACTTTACCAGACTGTCT 1982
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 1843 ATTACAAGCTTCTGGTGAGGCGGTTTTTGTTGATGATATACCGACTTTACCGGACTGT-T 1901
Query 1983 T-CATGGAGCATTCATTTATAGCACAGAGCCTTTGGCTAAGATAAAAAGC-TTAAGCTTC 2040
| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1902 TACATGGAGCATTCATTTATAGCACAGAGCCTTTGGCTAAGATAAAAAGCATT-AGCTTC 1960
Query 2041 AGAGAGAATGT-AACTCCTACTGGAGTTTTTGCTGTTCTTACTTTCAAGGATATTCCACA 2099
||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 1961 AGAGAGAATGTGAA-TCCTACTGGAGTTTTTGCAGTTCTTACTTTCAAGGATATTCCAGA 2019
Query 2100 ACAAGGACAAAACATTGGTTCCAAGACCCTTTTTGGACCAGGACCTTTATTTGCAGATGA 2159
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2020 ACGAGGACAAAACATTGGTTCCAAGACCCTTTTTGGACCAGGACCTTTATTTGCAGATGA 2079
Query 2160 ACTAACTCGATGTGCAGGTCAAAGAATTGCTCTTGTGGTTGCAGACACACAGAAACATGC 2219
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2080 ACTAACTCGATGTGCTGGTCAAAGAATTGCTCTTGTGGTTGCAGACACACAGAAACATGC 2139
Query 2220 AGACATGGCTGCAAAACTTGCAGTAGTTGAGTATGATACAAAGAATTTAGAACAACCGAT 2279
||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2140 AGACAGGGCAGCAAAACTTGCAGTAGTTGAGTATGATACAACGAATTTAGAACAACCGAT 2199
Query 2280 ATTAACTGTCGAAGATGCAGTTAAAAGATCTAGCTTTTTCGAGGT-TCATCCGATGTTTT 2338
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 2200 ATTAACTGTCGAAGATGCAGTTAAAAGATCTAGCTTTTTCGAGGTCT-ATCCGATGTTTT 2258
Query 2339 ACCCCGAACCAGTAGGTGATGTTATAAAAGGAATGGAAGAAGCTGAGCGAAAGATAATCT 2398
|||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 2259 ACCCTGAACCAGTCGGTGATGTTATAAAAGGAATGGAAGAAGCTGAGCGGAAGATAATGT 2318
Query 2399 CCTCTGAGTTGAGGCTAGGGTCACAGTACTTCTTCTATATGGAGCCACAAACAGCACTTG 2458
| | ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2319 CGGCCGAGTTGACGCTCGGGTCACAGTACTTCTTCTATATGGAGCCACAAACAGCACTTG 2378
Query 2459 CCTTGCCAGACGAAGACAATTGTGTCAAGGTATTTAGTTCATCTCAAGCACCTGAGTACG 2518
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2379 CCTTGCCAGATGAAGACAATTGTGTCAAGGTATTTAGTTCATCTCAAGCACCTGAGTACG 2438
Query 2519 TACATTCGGTTATTGCTACATGTCTTGGCATTCAAGAGCATAACGTGAGAGTCATCACTA 2578
| ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||| || |
Sbjct 2439 TGCATTCGGTTATCGCTACATGTCTCGGCATCCAAGAGCATAACGTTCGAGTCATTACCA 2498
Query 2579 GAAGAGTTGGTGGTGGCTTTGGTGGTAAAGCTGTAAAGTCAATGCCTGTTGCAACCGCAT 2638
|||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 2499 GAAGAGTTGGAGGTGGCTTTGGTGGTAAAGCTGTAAAGTCAATGCCTGTTGCGACAGCAT 2558
Query 2639 GCGCACTAGGCGCATACAAGTTGCAACGTCCTGTTAAGATGTTTTTGAACCGCAAGACGG 2698
| ||| ||||||||||||| |||||||||||||||||||||| | |||||||||| || |
Sbjct 2559 GTGCATTAGGCGCATACAAATTGCAACGTCCTGTTAAGATGTATCTGAACCGCAACACCG 2618
Query 2699 ATATGATAATGGCTGGAGGAAGACATCCGATGAAGATAAATTACAATGTGGGATTTAGAT 2758
|||||||||||||||||||||| ||||| ||||| |||| ||||||||| || |||||||
Sbjct 2619 ATATGATAATGGCTGGAGGAAGGCATCCAATGAAAATAACTTACAATGTTGGTTTTAGAT 2678
Query 2759 CAGATGGGAAGCTCACAGCACTGGAGCTTACAATGCTTATAGATGCAGGGCTTGAGCCAG 2818
||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||| |
Sbjct 2679 CAGATGGGAAGCTCACAGCACTGGAACTTACCATGCTAATAGACGCAGGGCTTGAGCCGG 2738
Query 2819 ACGTAAGTCCAATCATGCCGCGGAATATAATGGGTCCGCTGAGGAAGTATGACTGGGGAG 2878
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 2739 ACGTAAGTCCAATCATGCCGCGGAATATAATGGGTCCGCTAAGGAAGTATGATTGGGGAG 2798
Query 2879 CTTTGTCATTTGATGTAAAAGTGTGTAAGACGAATTGTCTGAGTAGAACAGCGATGAGAG 2938
||||||||||||| ||||||||||| ||||| ||||||| ||||||||| ||||||||||
Sbjct 2799 CTTTGTCATTTGACGTAAAAGTGTGCAAGACAAATTGTCCGAGTAGAACGGCGATGAGAG 2858
Query 2939 CTCCCGGGGAAGTTCAAGGTTCTTACATAGCGGAATCCATTATCGAGAATGTAGCTTCTT 2998
||||||||||||| ||||||||||| || |||||||| ||||||||||||||||| ||||
Sbjct 2859 CTCCCGGGGAAGTACAAGGTTCTTATATTGCGGAATCTATTATCGAGAATGTAGCCTCTT 2918
Query 2999 CTCTTCAAATGGATGTTGATGCAGTGAGAAAAATAAACCTTCATACTTATGATAGCCTTA 3058
|||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |
Sbjct 2919 CTCTTCAAATGGATGTTGATGCGGTGAGAAAGATAAACCTTCATACTTATGACAGCCTCA 2978
Query 3059 GAAAATTCTACAATCACATTGCTGGTGATCCTGATGAATATACACTGCCTTTATTATGGG 3118
||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 2979 GAAAATTCTACAAGCACATTTCTGGTGATCTTGATGAATATACACTGCCTTTATTATGGG 3038
Query 3119 AGAAACTTG-AGATATCTTC-AAAGTTCAAGGAAAGATCTGAGATGGTGAAGGAGTTTAA 3176
| ||| ||| |||||||||| ||| || ||| ||||| ||||||| ||||||||||||||
Sbjct 3039 ACAAA-TTGGAGATATCTTCGAAATTTAAAG-AAAGAGCTGAGATAGTGAAGGAGTTTAA 3096
Query 3177 TCTTTGTAATGTATGGCGAAAGAGAGGGATTTCTCGAGTACCTATAGTCCATCAAGTTAT 3236
||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3097 TCTTTCTAACGTATGGCGAAAGAGAGGGATTTCTCGAGTACCTATTGTCCATCAAGTTAT 3156
Query 3237 GCAGAGACCGACCCCGGGGAAAGTAAGCATACTGAGTGATGGTTCTGTTGTAGTTGAGGT 3296
|||||| |||||||||||||| |||||||| | ||||||||||||||||| ||||||||
Sbjct 3157 GCAGAGGCCGACCCCGGGGAAGGTAAGCATTTTAAGTGATGGTTCTGTTGTGGTTGAGGT 3216
Query 3297 TGGAGGAATTGAGATAGGGCAAGGATTGTGGACTAAAGTACAACAGATGGTTGCTTATGG 3356
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3217 TGGAGGAATTGAGATAGGGCAAGGATTGTGGACCAAAGTACAACAGATGGTTGCTTATGG 3276
Query 3357 TCTCGGTATGGTTAAATGCGAAGGAAACGAAAAGCTCTTGGATAGAATACGTGTAGTTCA 3416
|||||||||||||||||||||||||| ||||||| | ||||| |||||||| || |||||
Sbjct 3277 TCTCGGTATGGTTAAATGCGAAGGAAGCGAAAAGTTGTTGGAGAGAATACGGGTTGTTCA 3336
Query 3417 GTCCGATACACTAGGTATGATCCAAGGAGGTTTCACTGCTGGTAGCACGACATCCGAGAG 3476
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3337 GTCCGACACACTCGGTATGATCCAAGGAGGTTTCACTGCTGGTAGCACGACATCCGAGAG 3396
Query 3477 CAGTTGTGAAGCCGTTAGGCTTTGCTGTGTTATCTTGGTGGAGAGATTGAAACCTATAAT 3536
||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||| |||
Sbjct 3397 CAGCTGTGAGGCCGTTAGGCTTTGCTGTGTTATCTTGGTGGAGAGACTAAAACCTACAAT 3456
Query 3537 GGATCAGATGATGATGGAGAAGTCAGGTTCCGTGACATGGAACATACTCATTCAACAAGC 3596
|||||||||| | ||||||||| | |||||||||||||||||||| ||||||||||||||
Sbjct 3457 GGATCAGATGTTAATGGAGAAGCCGGGTTCCGTGACATGGAACATGCTCATTCAACAAGC 3516
Query 3597 GTATGGTCAGTATATTAATTTATCGGCGAGTACATTGTATAAGCCAGAGTATTCTTCCAT 3656
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 3517 GTATGCTCAGTATATTAATTTATCGGCGAGTACATTGTATATGCCAGAGTATTCTACCAT 3576
Query 3657 GGAATATCTCAACTATGGAGTTGGAGTCAGCGAGGTGGAAGTGGACCTTGTGACAGGAAA 3716
|||||| ||||||||||| |||||||| | || | ||||||||||||||||||||
Sbjct 3577 GGAATACCTCAACTATGGGGTTGGAGT--G-GA-----A-GTGGACCTTGTGACAGGAAA 3627
Query 3717 AACCGAGATTTTAAGATCCGATATTATTTATGACTGTGGAAAGAGTCTTAATCCTGCAGT 3776
|||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct 3628 AACCGATATTTTAAGATCCGATATTATTTACGACTGCGGAAAAAGTCTTAATCCTGCAGT 3687
Query 3777 TGATTTAGGACAGACCGAAGGAGCATTTGTTCAAGGCATCGGGTTTTTCATGATGGAAGA 3836
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3688 TGATTTAGGACAGACCGAAGGAGCGTTTGTTCAAGGCATCGGGTTTTTCATGATGGAAGA 3747
Query 3837 GTACACTACTGATGAGAAGGGGCTTGTGGTGCAACAAGGCACTTGGGACTACAAAATACC 3896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3748 GTACACTACTGATGAGAAGGGGCTTGTGGTGCAACAAGGCACTTGGGACTACAAAATTCC 3807
Query 3897 GACTGTGGACACAATCCCAAAACACTTCAACGTTGAGATTGTCAACACTGGTCATCATAA 3956
|||||||| |||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct 3808 TACTGTGGATACAATCCCCAAACACTTCAACGTCGAGATTGTTAACACTGGTCATCACAA 3867
Query 3957 AAACCGCGTTCTCTCCTCCAAAGCGTCGGGTGAGCCGCCATTGCTTTTAGCAGCTTCTGT 4016
|||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||
Sbjct 3868 AAACCGCGTTCTCTCCTCCAAAGCTTCGGGTGAGCCGCCATTGCTTTTAGCGGCGTCTGT 3927
Query 4017 TCATTGTGCAACAAGATCAGCCATTAGGGAAGCTCGGAAACATTCCCTTTCATCGAAC-T 4075
|||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| |
Sbjct 3928 TCATTGTGCAACGAGATCAGCCATTAGGGAAGCTCGGAAACAGTCCATTTCATCGAACAT 3987
Query 4076 TCATTGATGGGTCTGATTCGGAATTTGAGTTACCTGTTCCAGCGACTATGCCTGTGGTGA 4135
| || ||||||| |||||||||||||||| |||| |||||||| ||||||||||||||||
Sbjct 3988 TAAT-GATGGGTTTGATTCGGAATTTGAGGTACCGGTTCCAGCAACTATGCCTGTGGTGA 4046
Query 4136 AGTCTCTTTGCGGATTGTATAGTGTAGAGAAATACTTACAAGGAAAGATCAAAGGACAAT 4195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4047 AGTCTCTTTGCGGATTGTATAGTGTAGAGAAATACTTACAAGGAAAGATCAAAGGACAAT 4106
Query 4196 AAAGGCAAAGCAAGTAAGCAACTCTCGTTGCTGCTAAGTTACAGTGTTACATATA----C 4251
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 4107 AAAGGCAAAGCAAGTAAGCAACTCTCGTTGCTGCTAATTTACAGTGTTACATATATATAC 4166
Query 4252 TAAAGTTATTCAGATTTTATATACAGCAAAAATAATTGCTTTGTGCATAACTAATGGTTT 4311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4167 TAAAGTTATTCAGATTTTATATACAGCAAAAATAATTGCTTTGTGCATAACTAATGGTTT 4226
Query 4312 CAAAACCAAATCAATAAATCAAATATTGAATGT 4344
|||||||||||||||||||||||||||||||||
Sbjct 4227 CAAAACCAAATCAATAAATCAAATATTGAATGT 4259
Score = 2183 bits (1182), Expect = 0.0
Identities = 1485/1625 (91%), Gaps = 46/1625 (3%)
Strand=Plus/Plus
Query 175 TGGTGTCACTGCTCTGGGaaaaaaaTGGATTTGGAGTTTGCAGTTAATGGGGAACGATTC 234
||||||||||| || |||||| |||||||||||||||||||| ||||| ||| |||||
Sbjct 126 TGGTGTCACTG--CT--GAAAAATATGGATTTGGAGTTTGCAGTCAATGGAGAAAGATTC 181
Query 235 AAGATTGATTCTGTTGATCCATCAACGACCTTACTTGAGTTCTTGCGATTGAACACTCCT 294
|||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||
Sbjct 182 AAGATTGATTCTGTTGATCCATCAACCACTTTACTCGAGTTCTTGCGATTAAACACTCCT 241
Query 295 TTCAAGAGTGTCAAGCTCGGCTGTGGCGAAGGAGGGTGTGGTGCTTGTCTTGTAGTGTTA 354
||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 242 TTCAAGAGTGTCAAGCTCGGC--T----------GGTGTGGTGCTTGTCTTGTAGTGTTA 289
Query 355 TCTAA-ATATGATCCAGAGTTAGATCAAGTGAAGGAATGTTGTATAAACTCTTGTCTCAC 413
|| || ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 290 TC-AAGATATGATACAGAGTTAGATCAAGTGAAGCAATGTAGTATAAACTCTTGTCTCAC 348
Query 414 TCTTCTCTGTAGTGTAAATGGATGTTCCATTACTACATCTGAAGGTCTTGGAAACACGAA 473
||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct 349 TCTTCTCTGTAGTATAAATGGATGTTCAATTACTACATCTGAAGGTCTTGGTAACACAAA 408
Query 474 GAAAGGATTTCATCCGATTCATAAGCGGTTCGCGGGTTTTCACGCCTCTCAATGCGGGTT 533
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 409 GAAAGGATTTCACCCGATTCATAAGCGGTTCGCGGGTTTTCATGCCTCTCAATGCGGTTT 468
Query 534 TTGTACACCAGGGATGTGTATTTCTCTCTACTCATCTCTTGCAAATGCTGAGAATAACAG 593
||||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||
Sbjct 469 TTGTACACCAGGGATGTGTATTTCTCTATATTCAGCTCTTGCAAATGCTGATAATAACAG 528
Query 594 CTCTAAAGATTTTACGGTTTCTGAAGCTGAGAAATCTGTTTCGGGTAATCTTTGTCGATG 653
|| ||||| ||||||||||| |||||||||||||||||||| |||| ||||||||||||
Sbjct 529 ATCAAAAGAGTTTACGGTTTCCGAAGCTGAGAAATCTGTTTCCGGTAGTCTTTGTCGATG 588
Query 654 TACTGGTTATCGTCCCATTGTCGATGCTTGTAAGAGTTTTGCTTCTGATGTTGATATTGA 713
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 589 TACTGGTTATCGTCCCATTGTCGATGCTTGTAAGAGTTTTGCTACTGATGTTGATATTGA 648
Query 714 GGACTTAGGGTTAAATTCCTTTTGGAAAAAAGGAGAAAGCAAAGAGGTTATGTTTAAGAA 773
|||||| ||||| ||||||||||||||||| |||||||| |||||||||||||| |||||
Sbjct 649 GGACTTGGGGTTTAATTCCTTTTGGAAAAAGGGAGAAAGTAAAGAGGTTATGTTGAAGAA 708
Query 774 TTTGCCTCCTTATAACCCCAAAGACCATCTTGTAACATTCCCTGAGTTCTT--------- 824
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 709 TTTGCCTCCTTATAACCCCAAAGACCATCTTGTAACATTCCCTGAGTTCTTGAAGAAGAA 768
Query 825 ---GAAGAAGA-A-AG----AGAAGGTTGATAATGGTTCGGATCATTTGAAGTATCGTTG 875
|||||||| | || |||||||||||||||||| |||||||| || |||||||||
Sbjct 769 GAAGAAGAAGAGAGAGATAAAGAAGGTTGATAATGGTTTGGATCATTCGAGGTATCGTTG 828
Query 876 GACCACTCCTTTTAGTGTGGCTGAGCTTCATAACATAATGGAAGCAGCTAACTCTGGAGA 935
||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||
Sbjct 829 GACCACTCCTTTTAGCGTAGCTGAGCTTCATAACATAATGGATGCTGCTAACTCTGGAGA 888
Query 936 CTCGTTGAAGTTAGTTGTAGGCAACACGGGTACAGGTTACTATAAAGACGAGGAACGGTT 995
|||||||||||| ||||| || |||||||||||||||||||| ||||| |||||||||||
Sbjct 889 CTCGTTGAAGTTCGTTGTGGGAAACACGGGTACAGGTTACTACAAAGATGAGGAACGGTT 948
Query 996 TGATAGATATATTGATATCAGTAACATTCCGGAGATGTCAATGATCAAGAAAGATGAGAA 1055
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 949 TGATAGATATATTGATATCAGTCACATTCCGGAGATGTCAATGATCAAGAAAGATGAGAA 1008
Query 1056 AGGAATTGAAATAGGAGCAGCTGTTACTATATCGAATGCTATTGATGCTTTGG-AGAAGG 1114
|||||||||||| |||||||||||||| ||||| ||||||||||||||||||| || |||
Sbjct 1009 AGGAATTGAAATTGGAGCAGCTGTTACCATATCAAATGCTATTGATGCTTTGGAAG-AGG 1067
Query 1115 AAAGCAAATCTTCTTATGTTTTCAAGAAAATGGCCACTCATATGGAGAAAATTGGCAACC 1174
||||||||||||||||| |||||||||||||||| |||||||||||| |||||| ||||
Sbjct 1068 AAAGCAAATCTTCTTATATTTTCAAGAAAATGGCGGCTCATATGGAGAGAATTGGAAACC 1127
Query 1175 GTTCTATCCGAAACTC-GGGTAGTATTGGTGGTAATCTAGTGATGGCACAGAGCAGAAAG 1233
|||||||| | ||||| ||| ||||| || ||||||||||||||||| ||||||||||||
Sbjct 1128 GTTCTATCAGGAACTCAGGG-AGTATAGGCGGTAATCTAGTGATGGCTCAGAGCAGAAAG 1186
Query 1234 TTTCCTTCTGATGTTACCAC-TTTGTTGCTCGCTGTAGATGCCTCGGTGTATATGTTAAA 1292
|||||||||||| ||||||| || ||||| ||||||||||| |||||||||||||||||
Sbjct 1187 TTTCCTTCTGATATTACCACGCTT-TTGCTAGCTGTAGATGCATCGGTGTATATGTTAAA 1245
Query 1293 TGGTAGGAAAACCGAGAAGGTTACGCTACAGGAGTTTCTTGAATTGTCTCCGGTGTTAGA 1352
|||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||
Sbjct 1246 TGGTAGGAAAACCGAGAAGGTTACGCTACAAGAGTTTCTTGAATTGTCTCCGATATTAGA 1305
Query 1353 CTCCAAACGCGTTCTTTTAAAGGTTGAGATTCCATCATGGACTGCTCCTTCTGGTGATGA 1412
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 1306 CTCCAAACGCGTTCTTTTAAAGGTTGAGATACCATCATGGACTGCTCTTTCTGGTGATGA 1365
Query 1413 CACTGAATTTCTCTTTGAAAGCTATCGAGCCGCACCTCGTTCTATTGGAAATGCATTGCC 1472
||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 1366 CACTGAATTGCTCTTTGAAAGCTATCGAGCCACGCCTCGTTCTATTGGAAATGCATTGCC 1425
Query 1473 TTACTTGAACGCTGCTTTCTTGGCGCTAGTGTCTCGCCAAGAAGCATCAAGAAAAGGTGT 1532
||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||
Sbjct 1426 TTACTTGAACGCTGCTTTCTTGGCGATAGTGTCTCGCCAAGAACCATCAAGAAAAGATGT 1485
Query 1533 AACGGTAGAAAAATGCTTCCTGGCATTTGGTTCTTATGGCGGGGATCATTCGATCAGGGC 1592
||||||||| | |||||| |||||||||||||||||||||| |||||||| ||||||||
Sbjct 1486 AACGGTAGATAGATGCTTGTTGGCATTTGGTTCTTATGGCGGCGATCATTCAATCAGGGC 1545
Query 1593 GAT-AGAAGTGGAGACTTTCTTGACAGGTAAATTACTTAGCTACAGTGTTCTATATGAAG 1651
||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1546 GATCA-AAGTGGAGAATTTCTTGACAGGTAAATCACTTAGCTACAGTGTTCTATATGAAG 1604
Query 1652 CTGTTGGTTTACTTAAAGGAATCATAGTCCCTGGCAAAGACACCTTGCACTCGGAATATA 1711
||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||
Sbjct 1605 CTGTTGGTTTACTTAGAGGAATCATAGTTCCTGGCAAAGACACCTCGCACTCGGAATATA 1664
Query 1712 GAAAAAGCTTGGCTGTTGGATATCTTTTTGAGtttttt-tACCCACTGATCGAGAGTGGC 1770
| ||||||||||||||||||| |||||| || |||||| | |||||||||||| |||
Sbjct 1665 GTAAAAGCTTGGCTGTTGGATTTCTTTTCGA-TTTTTTCTGTTCACTGATCGAGAATGGG 1723
Query 1771 CATAG 1775
|||||
Sbjct 1724 CATAG 1728
Score = 130 bits (70), Expect = 9e-29
Identities = 105/120 (88%), Gaps = 9/120 (8%)
Strand=Plus/Plus
Query 3 AGATGTGCGTGAAAGAGGCGCAACTATAAGAGAAGCTGATATGAAACTCTTCATCACATC 62
||||||||||||||||||||||||||||||| || |||| |||||||||||| | ||
Sbjct 1 AGATGTGCGTGAAAGAGGCGCAACTATAAGACAAACTGAAATGAAACTCTTCGT--CA-- 56
Query 63 TCCCTCAAACTTATTTCTCTCTTTAATTGGTTAAATCTCCACACCCACTTCGTGTTTTCT 122
|||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 57 -----CAAACTTATTTCTCTCTTTAATTGGTTAAATCACCACACCCACTTCTTGTTTTCT 111
> Ahg470440 jgi|Araly1|470440|fgenesh2_kg.1__394__AT1G04580.1
Length=4097
Score = 2510 bits (1359), Expect = 0.0
Identities = 3152/3990 (79%), Gaps = 233/3990 (6%)
Strand=Plus/Plus
Query 202 GATTTGGAGTTTGCAGTTAATGGGGA-ACGA-TTCAAG-ATTGATTCTGTTGATCCATCA 258
||||||| |||||| |||||||| || | || || ||| ||| || || |||| ||
Sbjct 13 GATTTGGTGTTTGCTGTTAATGGAGAGA-GATTTGAAGTCTTG--TCAGTCAATCCTTCT 69
Query 259 ACGACCTTACTTGAGTTCTTGCGATT-GAACACTC-CTTTCAAGAGTGTCAAGCTCGGCT 316
||||| ||||| ||||||||||| || ||||||| |||| ||||||||||||||| |||
Sbjct 70 ACGACTTTACTCGAGTTCTTGCG-TTCCAACACTCGCTTT-AAGAGTGTCAAGCTCAGCT 127
Query 317 GTGGCGAAGGAGGG-TGTGGTGCTTGTC-TTGTAGTGT-TATCTAAATATGATCCAGAGT 373
|||||||||| ||| ||||||||||| | | ||| | | |||| ||||||||||| | ||
Sbjct 128 GTGGCGAAGG-GGGTTGTGGTGCTTG-CATCGTAAT-TCTATCAAAATATGATCCTGTGT 184
Query 374 TAGATCAAGT-GAAGGAATGTTGTATAAACTCTTGTCTCACTCTTCTCTGTAGTGTAAAT 432
|||| ||||| | |||| | || |||||||||||| || || ||||| || || |||||
Sbjct 185 TAGACCAAGTCG-AGGAGTATTCTATAAACTCTTGCCTGACCCTTCTTTGCAGCATAAAT 243
Query 433 GGATGTTCCATTACTACATCTGAAGGTCTTGGAAACAC-GAAGAAAGGATTTCATCCGAT 491
|| || ||||| || ||||| || || ||||||||||| ||| ||||| || || || ||
Sbjct 244 GGGTGCTCCATAACCACATCCGATGGACTTGGAAACACTGAA-AAAGGGTTCCACCCAAT 302
Query 492 TCATAAGCGGTTCGC-GGGTTTTCACGCCTCTCAATGCGGGTTT-TGTACACCAGGGATG 549
||| ||| | || || ||| || || ||||||||||| ||||| ||||| || ||||||
Sbjct 303 TCACAAGAGATTTGCAGGG-TTCCATGCCTCTCAATG-TGGTTTCTGTACCCCGGGGATG 360
Query 550 TGTATTTCTCTCTACTCAT-CTCTTGCAAATGCTGAGAA-T--AACAGCTCTA-AA-GAT 603
|| || ||||||||||| | ||||| |||| || | || | || | ||| | || |
Sbjct 361 TGCATCTCTCTCTACTC-TGCTCTTTCAAAAGCCCATAACTCCAAAAACTC-ACAATCTT 418
Query 604 -T-----TTA-C-G-GT-TTC-TGAAGCTGAGAAATCTGTTTCGGGTAATCTTTGTCGAT 652
| ||| | | | || |||||| ||||| ||| || | || ||||||||||| |
Sbjct 419 CTCCGGATTACCTGACTGCTCTTGAAGCCGAGAAGTCTATTGCTGGAAATCTTTGTCGCT 478
Query 653 GTACTGGTTATCGTCCCATTGTC-GATGCTTGTAAGAGTTTTGCTTCTGATGTTGATATT 711
| || |||||||||||||||| | ||||||||||||||||||||| ||||||| |||||
Sbjct 479 GCACCGGTTATCGTCCCATTG-CTGATGCTTGTAAGAGTTTTGCTGCTGATGTGGATATA 537
Query 712 GAGGACTTAGGG-TTAAATTCCTTTTGGAAAAAAGGAGAAAGCAAAGAGGTTATGTTTAA 770
||||| || ||| || || || ||||||| ||||||||||||| ||| | ||||| ||
Sbjct 538 GAGGA-TTTGGGTTTCAACTCTTTTTGGAGGAAAGGAGAAAGCAGAGAAGAGATGTTCAA 596
Query 771 GAATTTGCCTCCTTATAACCC-CA-AAGACCATCTTGTAACATTCCCTGAGTTCTTGAAG 828
||| ||||||||||| ||||| | || | ||||||| || || || || |||||||||
Sbjct 597 GAAATTGCCTCCTTACAACCCTGATAA-A-GATCTTGTCACTTTTCCAGACTTCTTGAAG 654
Query 829 AAGAAAGA-GAAG-GT--TGATAATGGTTCGGATCATTTGAA-GTATCGTTGGACCACTC 883
| ||||| ||| || | |||| || |||||| || ||||| ||||| |||||
Sbjct 655 GA-AAAGATAAAGTGTCAACAAAATGTTTTGGATCA-GACAAGGTATCATTGGAGCACTC 712
Query 884 CTTTTAGTGTGGCTGAGCTTCA-TAACATAATGG-AAGCAGCTAACTCTGG---AG--AC 936
|| |||| || || |||||||| || ||| ||| || || | ||| |||| || |
Sbjct 713 CTGTTAGCGTCGCAGAGCTTCAGGAA-ATATTGGCAA-CAACCAACCCTGGAAAAGATAG 770
Query 937 TCG-TTG---AAGTTAGTTGTAGGCAACACGGGTACAGGTTACTATAAAGACGAGGAACG 992
| ||| || ||||||| ||||||||||| ||||||||||| ||||| ||| |||
Sbjct 771 AGGTTTGATCAAACTAGTTGTTGGCAACACGGGAACAGGTTACTACAAAGAAGAGAAACA 830
Query 993 GTTTGATAGATATATTGATATCAGTAACATTCCGGAGATGTCAATGATCAAGAAAGATGA 1052
| || ||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||
Sbjct 831 ATATGGTAGATATATTGATATTAGTCACATTCCAGAGATGTCAATGATCAAGAAAGATGA 890
Query 1053 GAAAGGAATTGAAATAGGAGCAGCTGTTACTATATCGAATGCTATTGATGCTTTGGA-GA 1111
| ||| |||||||| ||||||| |||||| ||||| || | |||||||||||| || |
Sbjct 891 CAGAGGTATTGAAATTGGAGCAGTTGTTACCATATCTAAAGTTATTGATGCTTT-GATGG 949
Query 1112 AGGAAAGCAAATCTTCTTATGTTTTCAAGAAAAT-GGCCACTCATATGGAGAAAATTGG- 1169
|||||| | |||| ||||||||||||||||||| || | ||||||||| || |||
Sbjct 950 AGGAAAATACATCTGCTTATGTTTTCAAGAAAATCGGTGTC-CATATGGAG-AAGGTGGC 1007
Query 1170 CAACCGTTCTATCCGAAACTC-GGGTAGTATTGGTGGTAATCTAGTGATGGCACAGAGCA 1228
||||| || |||| ||||||| ||| ||||| ||||||||||||||||||||||||||||
Sbjct 1008 CAACCATTTTATCAGAAACTCAGGG-AGTATCGGTGGTAATCTAGTGATGGCACAGAGCA 1066
Query 1229 GAAAG-TTTCCTTCTGATGTTACCAC-TTTGTTGCTCGCTGTAGATGCCTCGGTGTATAT 1286
|||| ||||||||||| | ||||| || |||||||||| |||||| || ||||||||
Sbjct 1067 -AAAGTTTTCCTTCTGACATAACCACACTT-TTGCTCGCTGCAGATGCATCTGTGTATAT 1124
Query 1287 GTTAAATGGTAGGAAAAC-CGAGAAGGTTACGCTACAG-GAGTTTCTTGAATTGTCTCCG 1344
| ||||| | ||| | || ||||||| ||| | | | |||| ||||| | | ||||
Sbjct 1125 GATAAAT-GCAGGGAGACACGAGAAGCTTAGGAT-GGGAGAGTATCTTGTGTCGCCTCCA 1182
Query 1345 GTGTTAGACTC-CAAACGCGTTCTTTTAAAGGTTGAGATTCC-ATCATGGACTGCTCCTT 1402
| |||||| | |||| ||||||||||||||| | ||||| | | |||| | | |||
Sbjct 1183 ATATTAGACACTAAAAC-TGTTCTTTTAAAGGTTCATATTCCTAGC-TGGA-T--TGCTT 1237
Query 1403 CTGGTGATGAC-ACTGAATTT-CTCTTT-GAAAGCTATCGAGCCGCACCTCGTTCTATTG 1459
|| | || |||| ||| || ||| |||| ||||||||| |||| ||| ||||||
Sbjct 1238 CT--T--CCACTACTG-GTTTGCT-TTTCGAAACCTATCGAGCTGCACTTCGCCCTATTG 1291
Query 1460 GAAATGCATTGCCTTACT-TGAACGCTGCTTTCTTGGCGCTAGT-GTCTCGCCAAGAAGC 1517
||| |||||||||||| | | |||||||||||||| || ||| ||||| ||||| ||
Sbjct 1292 GAAGTGCATTGCCTTA-TATCAACGCTGCTTTCTT--AGC-AGTAGTCTC-TCAAGATGC 1346
Query 1518 ATCAAGAAAAGGTGTAACGGTAGAAAAATGCTTCCTGGCATTTGGTTCTTATGGCGGGGA 1577
|||| || ||| | | || || |||||| ||||||||||||||| ||| ||| |
Sbjct 1347 ATCATCAAGAGGCATCATTGTGGATAAATGCCGGTTGGCATTTGGTTCTTTTGGTGGGTA 1406
Query 1578 TCATTCGATCAGGGCGATAGAAG-TGGAGACTTTCTTGACAGGTAAATTACTTAGCTACA 1636
|||||| |||||||||| |||| || ||| ||||||||| |||||| |||| ||| |||
Sbjct 1407 TCATTCCATCAGGGCGAGGGAAGTTGAAGA-TTTCTTGACGGGTAAAATACTCAGCCACA 1465
Query 1637 GTGTTCTATATGAAGCTGTTG-GTTTACTTAAAGGAATCATAGT-CCCTGGCAAAGACAC 1694
||||| |||||||||||| || | ||||||||||| |||||||| ||| ||| ||| ||
Sbjct 1466 GTGTTTTATATGAAGCTG-TGAGGTTACTTAAAGGGATCATAGTGCCC-AGCATAGATAC 1523
Query 1695 CTTGCA-CT-CGGAATAT-AGAAAAAGCTTGGCTGTTGGATATCTTTTTGAGtttt-ttt 1750
| | || | | || ||| || ||||||||||||||||| | ||| ||||| |||| | |
Sbjct 1524 C-T-CATATCCTGAGTATAAG-AAAAGCTTGGCTGTTGGGTTTCTCTTTGA-TTTTCTCT 1579
Query 1751 ACCCACTGATCGAGAGTGGCCATAGAATATGTAGTCTTGATTCAGGGAA-TAAGCATAAC 1809
| || ||||||||||| || | || | || | |||||| | || |||||||
Sbjct 1580 ATCCTCTGATCGAGAGCGG-C--AG--T-TG--G----GATTCA-GAAAGAAAGCATATT 1626
Query 1810 AACAGCCATGTTGATACCGTAA-A--ATCTCTTCCCTTCCTCTCATCTTCACAGCAAGTA 1866
| | || || ||| || || | || ||| || || || |||||| ||||||| ||
Sbjct 1627 GATGGGCACGTCGAT-CC--AACAGTATGTCTACCTTTGCTGTCATCTGCACAGCAGGTG 1683
Query 1867 TTAGAGAGCAATGAATTTAAACCTATTGGTGAAG-CAGTTATCAAAGTTGGAGCTGCCTT 1925
|| || || || |||| | | ||| ||||||||| || |||||||| ||||||||| |
Sbjct 1684 TTTGAAAGTAAAGAATATCACCCTGTTGGTGAAGCCA-TTATCAAATTTGGAGCTGAAAT 1742
Query 1926 ACAAGCTTCTGGTGAGGCGGTTTTTGTTGATGATATACCGA-CTTTACCAGACTGTCTTC 1984
|| ||||||||||| || |||| ||||||||||| || | | ||||| | ||||| |
Sbjct 1743 GCAGGCTTCTGGTGAAGCTGTTTACGTTGATGATATTCC-ATCCTTACCCCATTGTCTAC 1801
Query 1985 ATGGAGCATTCATTTATAGCACAGAGCCTTTGGCTAAGATAAAAAGC-TTAAGCTTCAGA 2043
||||||||||||| ||||||||| |||| || ||| ||| || ||| || | ||| ||
Sbjct 1802 ATGGAGCATTCATCTATAGCACAAAGCCATTAGCTTGGATTAAGAGCGTT-GGTTTCGGA 1860
Query 2044 -GAGAATGTAACTCCTACTGGAGTTTTTGCTGTTCTTACTTTCAAGGATATTCCACAACA 2102
|| ||||| || || | ||||||||| || ||| ||||||||||||||||||| |||
Sbjct 1861 GGA-AATGTGACACCAATTGGAGTTTTGGCAGTTATTACTTTCAAGGATATTCCTCAAGT 1919
Query 2103 AGGACAAAACATTGGTTCCAAGA-CCCTTTTTGGAC-CAGGACCTT-TATTTGCAGATGA 2159
|| ||||||||||||| | | | | | ||||| | |||| ||| |||||||||||||
Sbjct 1920 GGGGCAAAACATTGGTTAC-ATATCGATGTTTGG-CACAGG-GCTTCTATTTGCAGATGA 1976
Query 2160 ACTAACTCGATGTGCAGGTCAAAGAATTGCTCTTGTGGTTGCAGACACACAGAAACATGC 2219
| | ||| || ||| || |||| ||||||||||||||||||||||||||| ||||||||
Sbjct 1977 AGTTACTATATCTGCCGGACAAATAATTGCTCTTGTGGTTGCAGACACACAAAAACATGC 2036
Query 2220 AGACATGGCTGCAAAACTTGCAGTAGTTGAGTATGATACAAAGAATTTA-GAACAACCGA 2278
|| ||||| ||||| || |||||||||||||| ||| ||| | || || |||| ||| |
Sbjct 2037 CGATATGGCAGCAAACCTCGCAGTAGTTGAGTACGATTCAAGGTATATAGGAAC-ACC-A 2094
Query 2279 -TATTAACTGTCGAAGATGCAGTTAAAAGATCTAG-CTTTTTCGAGGTTCAT-CCGATGT 2335
||||| |||| || |||||||| ||||| || || |||||| ||||||| | |||| ||
Sbjct 2095 GTATTATCTGTGGAGGATGCAGTCAAAAGGTCCAGCCTTTTT-GAGGTTCCTCCCGA-GT 2152
Query 2336 TTTACCCCGAACCAGTAGGTGATGTTAT-AAAAGGAATGGAAGAAGCTGAGCGAAAGATA 2394
|||||||||||| || || ||| || | ||||||||||| |||||||| || ||||||
Sbjct 2153 ATTACCCCGAACCCGTTGGCGATATT-TCAAAAGGAATGGCTGAAGCTGATCGCAAGATA 2211
Query 2395 ATCTCCTCT-GAGTTGAGGCTAGGGTCACAGTACTTCTTCTATATGGAGCCACAAACAGC 2453
|| | | |||||||| || ||||||||||||||||||||||||||| ||||||||||
Sbjct 2212 CGCT-CAGTAGAGTTGAGACTTGGGTCACAGTACTTCTTCTATATGGAGACACAAACAGC 2270
Query 2454 ACTTGCCTTGCCAGACGAAGACAATTGTGTCAA-GGTATTT-AGTTCATCTCAAGCACCT 2511
|||||||||||||||||||||||| ||| | | ||| || |||||| ||||| ||||
Sbjct 2271 ACTTGCCTTGCCAGACGAAGACAACTGTTT-AGTGGT-TTACAGTTCAACTCAATCACCC 2328
Query 2512 GAGTACGTACATTCGGTTATTGCTACATGTCTTGGCATTCAAGAGCATAACGTGAGAGTC 2571
|||||| ||| || || ||||||||||||||||| |||| || ||||||||| |||||
Sbjct 2329 GAGTACACACAATCAGTAATTGCTACATGTCTTGGAATTCCAGCGCATAACGTTCGAGTC 2388
Query 2572 ATCACTAGAAGAGTTGGTGGTGGCTTTGGTGGTAAAGCTGTAAAGTCAATGCCTGTTGCA 2631
||||| |||||| |||| |||||||||||||| |||||| ||||||| ||||||||||||
Sbjct 2389 ATCACCAGAAGAATTGGAGGTGGCTTTGGTGGAAAAGCTATAAAGTCTATGCCTGTTGCA 2448
Query 2632 ACCGCATGCGCACTAGGC-GCATACAAGTTGCAACGTCCTGTTAAG-ATGTTTTTGAACC 2689
|| ||||| || || | | ||| | || |||| | |||||| ||| || | | ||||
Sbjct 2449 ACAGCATGTGCGCTTG-CTGCAAAAAAAATGCAGCATCCTGT-AAGGATATACGTCAACC 2506
Query 2690 GCAAGACGGATATGATAATGGCTGGAGGAAGACATCCGATGAAGATAAATTACAATGTGG 2749
| ||||| |||||| |||||||||||||||| ||||| ||||| |||| ||||| ||| |
Sbjct 2507 GTAAGACTGATATGGTAATGGCTGGAGGAAGGCATCCCATGAAAATAACTTACAGTGTAG 2566
Query 2750 GATTT-AGATCAGATGGGAAGCTCACAGCACTGGAGCTTACA-ATGCTTA-TAGATGCAG 2806
| ||| ||||| || || || ||||||||||| | ||| | | ||| ||| |||||||||
Sbjct 2567 G-TTTCAGATCTGACGGTAAACTCACAGCACTAGCGCTAA-ATATG-TTAATAGATGCAG 2623
Query 2807 GGCT-TGA-GCCAGACGTAAGTCCAATCATGCCGCGGAATATAATGGGT-CCGCTGAGGA 2863
|| | ||| | || ||||||| | | ||||| | |||||||||| | || |||||||
Sbjct 2624 GG-TGTGATGTG-GATGTAAGTCTAGTAATGCCACAGAATATAATGAATTCC-CTGAGGA 2680
Query 2864 AGTATGACTGGGGAGCTTTGTCATTTGATGTAAAAGTGTGTAAGACGAAT-TGTCTGAGT 2922
| ||||| ||||| || ||||||||||| | |||||||||||||| || | || |||
Sbjct 2681 AATATGAATGGGGCGCATTGTCATTTGACATTAAAGTGTGTAAGACAAACCT-TCCGAGC 2739
Query 2923 AGAACAG-CGATGAGAGCTCCCGGGGAAGTTCAAGGTTCTTACATAGCGGAATCCATTAT 2981
||||| | | | || || ||||| || || |||||||| ||||| || |||||||||||
Sbjct 2740 AGAAC-GTCTTTAAGGGCACCCGGTGAGGTACAAGGTTCATACATTGCTGAATCCATTAT 2798
Query 2982 CGAGAATGTAGCTTCTTCTCTTCAA-ATGGATGTTGATGCAGTGAGAAAAATAAACCTTC 3040
||||||||||| ||||| || || ||||| || |||| ||||||| ||||| ||||
Sbjct 2799 TGAGAATGTAGCATCTTCCCTG-AACATGGACGTGGATGTTGTGAGAAGGATAAATCTTC 2857
Query 3041 ATACTTATGATAGCCTTAGAAAATTCTACAATCACA-TTGCTGGTGATCCTGATGAATAT 3099
||||||| || ||||| || || || || || || | |||||||||| ||||||||||||
Sbjct 2858 ATACTTACGAAAGCCTCAGCAAGTTTTATAAGCA-AGTTGCTGGTGAGCCTGATGAATAT 2916
Query 3100 ACACTGCCTTTATTATGGGAGAAACTTG-AGATATCTTCAAAGTTCAAG-GAAAGATCTG 3157
|| |||||||||| ||||| ||| ||| |||||||| || | |||| | ||| | | ||
Sbjct 2917 ACTTTGCCTTTATTGTGGGATAAA-TTGGAGATATCTGCAGATTTCAGGCGAAGGGT-TG 2974
Query 3158 AGAT-GGTGAAGGAGTTTAATCTTTGTAATGTATGGCG-AAAGAGAGGGATTTCTCGAGT 3215
| || |||||| |||||||| | ||||| ||||||| ||| || ||||||||||||||
Sbjct 2975 A-ATCGGTGAAAGAGTTTAACCGATGTAACATATGGCGCAAA-AGGGGGATTTCTCGAGT 3032
Query 3216 ACCTAT-AGTCCATCAAGTTATGCAGAGACCGACCCCGGGGAAAGTAAGCATACTGAGTG 3274
||| || | ||||||||||| |||| || || || || || ||||||||||| ||| ||
Sbjct 3033 ACCCATCA-TCCATCAAGTTGTGCATAGGCCAACTCCAGGAAAAGTAAGCATTTTGAATG 3091
Query 3275 ATGGTTCTGTTGTAGTTGAGGTTGGAGGAATTGAGATAGGGCAAGGATTGTGGACTAAAG 3334
||||||| |||| |||||||||| ||| |||||| | |||||||| |||||||| ||||
Sbjct 3092 ATGGTTCGGTTGCGGTTGAGGTTGCAGGGATTGAGGTGGGGCAAGGGTTGTGGAC-AAAG 3150
Query 3335 -TACAACAGATGGTTGCTTATGGTCTCGGTATGGTTAAATGCGAAGGAAACGAAAAGCT- 3392
||||||||||||||||||||||||| |||||| | |||||||| |||| ||| | ||
Sbjct 3151 GTACAACAGATGGTTGCTTATGGTCTTGGTATGATAAAATGCGACGGAAGTGAAGATCTG 3210
Query 3393 CTTGGATAGAATACGTG-TAGTTCAGTCCGATACACT-AGGTATGA-TCCAAGGAGGTTT 3449
|||| | |||||||| | | ||||| | || ||||| || |||| || ||| || ||
Sbjct 3211 CTTGAA-AGAATACG-GCTTCTTCAGACTGACACACTCAG-TATGGCTCAAAGCAG-TTA 3266
Query 3450 CACTGCTGGTAGCACGACATCCGAGAGCAGTTGTGAAGCCGTTAGGCTTTGCTGTGTTAT 3509
|||||| |||||||| |||||||||| | |||||||||| || ||||||||||| | |||
Sbjct 3267 CACTGCGGGTAGCACAACATCCGAGAACTGTTGTGAAGCAGTGAGGCTTTGCTGCGGTAT 3326
Query 3510 CTTGGTGGAGAGATTGAAACCTATAATGGATCAGATGATGATGGAGAA-G-TCAGGTTCC 3567
|||||||||||| ||||||||| ||| ||||||| | ||||||| | || | | ||
Sbjct 3327 CTTGGTGGAGAGGCTGAAACCTACCATGAATCAGAT--TC-TGGAGAATGCTC-GAT-CC 3381
Query 3568 GTGACATGGAACATACTCATTCAACAAGCGTATGGTCAGTATATTAATTTATCGGCGAGT 3627
||||||||| |||| ||||||||||| || |||| ||| | | | | |||| || |
Sbjct 3382 GTGACATGGGACATGCTCATTCAACAGGCATATGCTCAATCTGTGGACCTATCAGCTCGG 3441
Query 3628 ACATTGTATAAGCCAGAGTATTCTTC--CATGGAATATCTCAACTATGGAGTTGGAGTCA 3685
||||| ||||||||||||| ||||| || | ||||||||||||| |||||||||| ||
Sbjct 3442 ACATTTTATAAGCCAGAGTCCTCTTCTGCA-G-AATATCTCAACTACGGAGTTGGAGCCA 3499
Query 3686 GCGAGGTGGAAGTGGACCTTGTGACAGGAAAAACCGAGATTTTAAGATCCGATATTATTT 3745
| |||||||| || |||||||||||||||| ||| || ||| ||||||| |||||||| |
Sbjct 3500 GTGAGGTGGAGGTTGACCTTGTGACAGGAAGAACAGAAATTATAAGATCAGATATTATCT 3559
Query 3746 ATGACTGTGGAAAGAGTCTTAATCCTGCAGTTGATTTAGGACAGACCGAAGGAGCATTTG 3805
||||||||||||| || ||||||||||| |||||||||||||||| ||||||||| ||||
Sbjct 3560 ATGACTGTGGAAAAAGCCTTAATCCTGCTGTTGATTTAGGACAGATCGAAGGAGCGTTTG 3619
Query 3806 TTCAAGGCATCGGGTTTTTCATG-ATGGAAGAGTACACTACTGATGAGAAGGGGCTTGTG 3864
||||||| || |||||||||||| ||| | |||||||| || |||| || |||||||||
Sbjct 3620 TTCAAGGAATAGGGTTTTTCATGTATG-AGGAGTACACGACAAATGAAAACGGGCTTGTG 3678
Query 3865 GTGCAACAAGGCACTTGGGACTACAAAATACCGACTGTGGACACAAT-CCCAAAACACTT 3923
| || |||| || ||||||||||||||||| || | |||||||| |||||| || ||
Sbjct 3679 AAGGAAGAAGGTACATGGGACTACAAAATACCTACAATAGACACAATTCCCAAA-CAATT 3737
Query 3924 CAACGTTGAGATTGTCAACACTGGTCATCATAAAAACCGCGTTCTCTCCTCCAAAGCGTC 3983
||||||| ||||| |||||| ||||||||| || |||||| |||| ||||| ||||| ||
Sbjct 3738 CAACGTTCAGATTCTCAACAGTGGTCATCACAAGAACCGCATTCTTTCCTCTAAAGCTTC 3797
Query 3984 GGGTGAGCCGCCATTGCTTTTAGCAGCTTCTGTTCATTGTGCAACAAGATCAGCCATTAG 4043
|||||||| || |||||| | || |||||||| || |||||||||||||||||||||||
Sbjct 3798 AGGTGAGCCTCCGTTGCTTGTGGCGGCTTCTGTGCACTGTGCAACAAGATCAGCCATTAG 3857
Query 4044 GGAAGCTCGGAAACATTCCCTTTCATCGAA 4073
|||||||| ||||| | |||||||| |||
Sbjct 3858 AGAAGCTCGAAAACAGTACCTTTCATGGAA 3887
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 164294542641
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5