BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G27860.1
Length=1525
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481719 jgi|Araly1|481719|fgenesh2_kg.4__779__AT2G27860.1 2047 0.0
Ahg470881 jgi|Araly1|470881|fgenesh2_kg.1__835__AT1G08200.1 1424 0.0
Ahg938560 jgi|Araly1|938560|scaffold_502751.1 619 2e-176
Ahg929464 jgi|Araly1|929464|scaffold_301921.1 614 7e-175
Ahg919938 jgi|Araly1|919938|scaffold_101219.1 614 7e-175
> Ahg481719 jgi|Araly1|481719|fgenesh2_kg.4__779__AT2G27860.1
Length=1398
Score = 2047 bits (1108), Expect = 0.0
Identities = 1250/1318 (95%), Gaps = 12/1318 (1%)
Strand=Plus/Plus
Query 1 CTCTTCCTCTTTAGATTCTCTCTCTACAGAGAACTT-GA-TTATTTTTTCTGATCTGAGa 58
||||| ||||||||||||||||||||||||||| || || || |||||||| |||||||
Sbjct 1 CTCTTTCTCTTTAGATTCTCTCTCTACAGAGAA-TTCGATTTTTTTTTTCTAATCTGAG- 58
Query 59 aaaaaaaTGGCGAATGGAGCTAATAGAGTGGATCTCGACGGGAAACCGATACAACCGTTG 118
||||||||||||| |||||||||||||||||||| ||||| ||||||||| ||||| |
Sbjct 59 -AAAAAATGGCGAACGGAGCTAATAGAGTGGATCTAGACGGAAAACCGATAAAACCGATC 117
Query 119 ACAATATGCATGATCGGCGCCGGAGGTTTCATCGGTTCACATCTCTGTGAAAAGCTCTTG 178
||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||
Sbjct 118 ACAATATGCATGATCGGAGCCGGAGGTTTCATCGGTTCACATCTCTGTGAAAAACTGATG 177
Query 179 ACCGAGACGCCACATAAGGTGCTTGCGCTCGATGTTTACAACGATAAGATCAAACACTTG 238
|| |||||||| || |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 178 ACGGAGACGCCTCACAAGGTGCTTGCGCTTGATGTTTACAACGATAAGATCAAACACTTG 237
Query 239 CTTGAGCCTGATACCGTTGAATGGAGTGGTCGGATCCAGTTTCATCGTATCAATATTAAG 298
|||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 238 CTTGAGCCAGATTCCGTTGAATGGAGTGGTCGGATCCAGTTTCATCGTATCAATATCAAG 297
Query 299 CATGATTCGAGACTTGAAGGTCTTGTTAAGATGGCGGATCTGATTATAAATCTTGCTGCG 358
||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct 298 CATGATTCGAGGCTTGAAGGTCTTATTAAGATGGCGGATCTGACTATAAATCTTGCTGCG 357
Query 359 ATCTGTACTCCAGCTGATTACAATACACGTCCTCTTGATACTATCTACAGCAATTTCATT 418
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 358 ATCTGTACTCCAGCTGATTACAATACACGTCCTCTTGATACAATCTACAGCAATTTCATT 417
Query 419 GATGCGCTTCCAGTTGTGAAATACTGTTCTGAGAACAACAAGCGTCTCATTCACTTTTCT 478
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 GATGCGCTTCCAGTTGTTAAATACTGTTCTGAGAACAACAAGCGTCTCATTCACTTTTCT 477
Query 479 ACCTGTGAAGTTTATGGAAAAACCATTGGAAGCTTTCTTCCTAAGGATCATCCTCTGCGT 538
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 478 ACCTGTGAAGTGTATGGAAAAACCATTGGTAGCTTTCTTCCTAAGGATCATCCTCTGCGT 537
Query 539 GATGATCCTGCTTTCTATGTTCTTAAAGAAGATATTTCCCCTTGCATATTTGGTTCAATT 598
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 538 GAGGATCCTGCTTTCTATGTTCTTAAAGAAGATATTTCCCCTTGCATATTTGGTTCAATT 597
Query 599 GAGAAGCAGAGGTGGTCATATGCGTGTGCAAAGCAACTGATTGAGAGACTTGTTTACGCT 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 GAGAAGCAGAGGTGGTCATATGCGTGTGCAAAGCAACTGATTGAGAGACTTGTTTACGCT 657
Query 659 GAGGGTGCTGAGAATGGGCTTGAGTTCACCATCGTACGACCTTTTAACTGGATTGGACCT 718
||||||||||||||||| ||||||||||| || ||| |||||||||||||||||||||||
Sbjct 658 GAGGGTGCTGAGAATGGACTTGAGTTCACTATTGTAAGACCTTTTAACTGGATTGGACCT 717
Query 719 AGGATGGATTTCATCCCCGGCATTGATGGTCCTAGCGAAGGTGTCCCACGTGTCCTTGCC 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 AGGATGGATTTCATCCCCGGCATTGATGGTCCTAGCGAAGGTGTCCCACGTGTCCTTGCC 777
Query 779 TGCTTTAGTAACAATCTTCTACGTCGTGAGCCTCTCAAGCTTGTAGATGGTGGAGAATCA 838
|| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 778 TGTTTTAGTAATAATCTTCTACGTCGTGAGCCTCTCAAGCTTGTGGATGGTGGAGAATCA 837
Query 839 CAGAGAACTTTCGTCTACATCAATGATGCTATTGAAGCTGTCCTTTTGATGATTGAAAAC 898
|||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 838 CAGAGAACTTTCATCTACATCAAGGATGCTATCGAAGCTGTCCTTTTGATGATTGAAAAC 897
Query 899 CCAGAGAGGGCAAATGGGCACATCTTCAACGTAGGCAACCCGAACAACGAAGTTACAGTA 958
||||||||||||||||| || |||||||| || ||||| |||||||||||||||||||||
Sbjct 898 CCAGAGAGGGCAAATGGCCATATCTTCAATGTGGGCAATCCGAACAACGAAGTTACAGTA 957
Query 959 AGACAGCTCGCTGAAATGATGACCGAGGTTTACGCAAAAGTGAGTGGAGAAGGAGCCATT 1018
||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 958 CGACAGCTAGCTGAAATGATGACTGAGGTTTACGCAAAAGTGAGTGGAGAAGGAGCCATT 1017
Query 1019 GAGAGCCCAACGGTTGATGTTAGCTCCAAAGAGTTTTACGGGGAAGGTTATGATGACAGT 1078
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 GAGAGCCCGACGGTTGATGTTAGCTCCAAAGAGTTTTACGGGGAAGGTTATGATGACAGT 1077
Query 1079 GACAAGAGAATCCCAGACATGACCATCATTAACCGCCAACTCGGATGGAACCCGAAAACA 1138
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1078 GACAAGAGAATCCCAGACATGACCATCATTAACCGCCAGCTCGGATGGAACCCGAAAACA 1137
Query 1139 TCGCTATGGGACTTGCTCGAGTCGACCTTAACCTACCAGCACAGGACATACGCTGAAGCT 1198
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1138 TCGCTGTGGGACTTGCTCGAGTCGACCTTAACCTATCAGCACAGGACCTACGCTGAAGCT 1197
Query 1199 GTGAAGAAGGCAACATCCAAACCAGTGGCTTCCTAAACTCTCCAAGACCCCA---ACGAA 1255
|||||||| ||||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct 1198 GTGAAGAAAGCAACATCCAAACCAGTGGCTTCCTAAACTCTCCAAGACCCAAGTTACCAA 1257
Query 1256 -A---CTCGTTAAACACGCGTCATTTTGGCATTTTACTCTATTCGATTCTAttttttt 1309
| |||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1258 CAAGACTCGTTAAACACGCATCATTTTGCCATTTTACTCTATTCGATTCTATTTTTTT 1315
> Ahg470881 jgi|Araly1|470881|fgenesh2_kg.1__835__AT1G08200.1
Length=1623
Score = 1424 bits (771), Expect = 0.0
Identities = 1039/1170 (89%), Gaps = 12/1170 (1%)
Strand=Plus/Plus
Query 61 aaaaaTGGCGAATGGAGCTAATAGAGTGGATCTCGACGGGAAACCGA-TACAACCG-TTG 118
||||||||| || ||||| | || ||||||| ||||| ||||||| || | ||| ||
Sbjct 77 AAAAATGGCTAACGGAGCCGGTCGATTGGATCTGGACGGTAAACCGATTA-AGCCGATT- 134
Query 119 ACAATATGCATGATCGGCGCCGGAGGTTTCATCGGTTCACATCTCTGTGAAAAGCTCTTG 178
|| ||||||||||||||||||||||||||||| || || ||||||||||| ||||| ||
Sbjct 135 ACGATATGCATGATCGGCGCCGGAGGTTTCATTGGCTCTCATCTCTGTGAGAAGCTAATG 194
Query 179 ACCGAGACGCCACATAAGGTGCTTGCGCTCGATGTTTACAACGATAAGATCAAACACTTG 238
|| ||||| || || |||||||| ||||||||||| ||||| ||||||||||| ||||||
Sbjct 195 ACGGAGACTCCTCACAAGGTGCTCGCGCTCGATGTCTACAATGATAAGATCAAGCACTTG 254
Query 239 CTTGAGCCTGATACCGTTGAATGGAG-TGGTCGGATCCAGTTTCATCGTATCAATATTAA 297
|||||||||||||||||| ||||| | ||||||||||||||||||||||||||| |||||
Sbjct 255 CTTGAGCCTGATACCGTTCAATGG-GCTGGTCGGATCCAGTTTCATCGTATCAACATTAA 313
Query 298 GCATGATTCGAGACTTGAAGGTCTTG-TTAAGATGGCGGATCTGATTATAAATCTTGCTG 356
||||||||| ||||| ||||| | || | |||||||| ||||||| |||||||| ||||
Sbjct 314 GCATGATTCTAGACTCGAAGGAC-TGATCAAGATGGCAGATCTGACGATAAATCTAGCTG 372
Query 357 CGATCTGTACTCCAGCTGATTACAATACACGTCCTCTTGATACTATCTACAGCAATTTCA 416
|||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 373 CGATCTGTACTCCAGCGGATTACAATACGCGTCCTCTTGACACTATCTACAGCAATTTCA 432
Query 417 TTGATGCGCTTCCAGTTGTGAAATACTGTTCTGAGAACAACAAGCGTCTCATTCACTTTT 476
||||||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||
Sbjct 433 TTGATGCTCTCCCAGTGGTTAAGTACTGCTCTGAGAACAACAAGCGTCTGATTCACTTTT 492
Query 477 CTACCTGTGAAGTTTATGGAAAAACCATTGGAAGCTTTCTTCCTAAGGATCATCCTCTGC 536
| || |||||||| ||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct 493 CCACTTGTGAAGTCTATGGAAAAACTATAGGAAGCTTTCTTCCAAAGGATCATCCTCTGC 552
Query 537 GTGATGATCCTG-CTTTCTATGTTCTTAAAGAAGATATTTCCCCTTGCATATTTGGTTCA 595
|| | ||||||| ||| ||||| || ||||||||||| ||||||||||| ||||||||
Sbjct 553 GTCAGGATCCTGAATTT-TATGTACTCAAAGAAGATATATCCCCTTGCATTTTTGGTTCT 611
Query 596 ATTGAGAAGCAGAGGTGGTCATATGCGTGTGCAAAGCAACTGATTGAGAGACTTGTTTAC 655
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 612 ATTGAGAAGCAGAGGTGGTCATATGCATGTGCAAAGCAACTTATTGAGAGACTTGTTTAT 671
Query 656 GCTGAGGGTGCTGAGAATGGGCTTGAGTTCACCATCGTACGACCTTTTAACTGGATTGGA 715
||||||||||||||||||||||| ||||||||||| ||| |||| || ||||||||||||
Sbjct 672 GCTGAGGGTGCTGAGAATGGGCTCGAGTTCACCATTGTAAGACCATTCAACTGGATTGGA 731
Query 716 CCTAGGATGGATTTCATCCCCGGCATTGATGGTCCTAGCGAAGGTGTCCCACGTGTCCTT 775
|||||||||||||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct 732 CCTAGGATGGATTTCATCCCTGGCATTGATGGTCCTAGCGAGGGTGTCCCTCGGGTCCTA 791
Query 776 GCCTGCTTTAGTAACAATCTTCTACGTCGTGAGCCTCTCAAGCTTGTAGATGGTGGAGAA 835
|| |||||||||||||| ||||| || || ||||||||||||||||| ||||||||||||
Sbjct 792 GCGTGCTTTAGTAACAACCTTCTGCGACGGGAGCCTCTCAAGCTTGTGGATGGTGGAGAA 851
Query 836 TCACAGAGAACTTTCGTCTACATCAATGATGCTATTGAAGCTGTCCTTTTGATGATTGAA 895
||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 852 TCACAGAGAACCTTCATCTACATCAAAGATGCTATTGAAGCTGTCCTTTTGATGATTGAA 911
Query 896 AACCCAGAGAGGGCAAATGGGCACATCTTCAACGTAGGCAACCCGAACAACGAAGTTACA 955
||||||||||| || |||||||| |||||||| ||||||||||| ||||| ||||| |||
Sbjct 912 AACCCAGAGAGAGCCAATGGGCATATCTTCAATGTAGGCAACCCAAACAATGAAGTGACA 971
Query 956 GTAAGACAGCTCGCTGAAATGATGACCGAGGTTTACGCAAAAGTGAGTGGAGA-AGGAGC 1014
|| ||||| || |||||||||||||| ||||| |||||||||||||||||||| | |||
Sbjct 972 GTGAGACAACTTGCTGAAATGATGACTGAGGTCTACGCAAAAGTGAGTGGAGAGAC-AGC 1030
Query 1015 CATTGAGAGCCCAACGGTTGATGTTAGCTCCAAAGAGTTTTACGGGGAAGGTTATGATGA 1074
||| |||||||||||| | ||||| ||||||||||| ||||| || ||||||||||||||
Sbjct 1031 CATCGAGAGCCCAACGATCGATGTGAGCTCCAAAGAATTTTATGGAGAAGGTTATGATGA 1090
Query 1075 CAGTGACAAGAGAATCCCAGACATGACCATCATTAACCGCCAACTCGGATGGAACCCGAA 1134
||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct 1091 CAGCGACAAGAGAATCCCAGACATGACCATCATCAACCGTCAACTTGGATGGAACCCGAA 1150
Query 1135 AACATCGCTATGGGACTTGCTCGAGTCGACCTTAACCTACCAGCACAGGACATACGCTGA 1194
|| ||||| ||||||||||| |||||||||||||| |||||||||| |||||| || ||
Sbjct 1151 GACTTCGCTTTGGGACTTGCTTGAGTCGACCTTAACATACCAGCACACGACATATGCGGA 1210
Query 1195 AGCTGTGAAGAAGGCAACATCCAAACCAGT 1224
||| | |||||||| || || ||||||||
Sbjct 1211 AGCCATTAAGAAGGCCACTTCAAAACCAGT 1240
> Ahg938560 jgi|Araly1|938560|scaffold_502751.1
Length=455
Score = 619 bits (335), Expect = 2e-176
Identities = 394/423 (93%), Gaps = 1/423 (0%)
Strand=Plus/Plus
Query 119 ACAATATGCATGATCGGCGCCGGAGGTTTCATCGGTTCACATCTCTGTGAAAAGCTCTTG 178
||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||
Sbjct 13 ACAATATGCATGATCGGAGCCGGAGGTTTCATCGGTTCACATCTCTGTGAAAAATTGATG 72
Query 179 ACCGAGACGCCACATAAGGTGCTTGCGCTCGATGTTTACAACGATAAGATCAAACACTTG 238
| |||||||| || ||||| |||||||| |||||||||||||| |||||||||||||||
Sbjct 73 ATGGAGACGCCTCAAAAGGTACTTGCGCTTGATGTTTACAACGAGAAGATCAAACACTTG 132
Query 239 CTTGAGCCTGATACCGTTGAATGGAGTGGTCGGATCCAGTTTCATCGTATCAATATTAAG 298
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 133 CTTGAACCTGATACCGTTGAATGGAGTGGTCGGATCCAGTTTCATCGTATCAATATTAAG 192
Query 299 CATGATTCGAGACTTGAAGGTCTTGTTAAGATGGCGGATCTGATTATAAATCTTGCTGCG 358
|||||||| || |||||||||||| |||||||||||||||||| |||| ||||||||| |
Sbjct 193 CATGATTCAAGGCTTGAAGGTCTTATTAAGATGGCGGATCTGACTATACATCTTGCTGTG 252
Query 359 ATCTGTACTCCAGCTGATTACAATACACGTCCTCTTGATACTATCTACAGCAATTTCATT 418
|||||||||||||||||||||||||||| ||||||||| || ||||||| ||||||||||
Sbjct 253 ATCTGTACTCCAGCTGATTACAATACACTTCCTCTTGAAACAATCTACAACAATTTCATT 312
Query 419 GATGCGCTTCCAGTTGTGAAATACTGTTCTGAGAACAACAAGCGTCTCATTCACTTTTCT 478
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 313 GATGCGCGTCCAGTTGTTAAATACTGTTCTGAGAACAACAAGCGTCTCATTCACTTTTCT 372
Query 479 ACCTGTGAAGTTTATGGAAAAACCATTGGAAGCTTTCTTCCTAAGGATCATCCTCTG-CG 537
||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| ||
Sbjct 373 ACCTGTGAAGTGTATGGAAAAACCACTGGTAGCTTTCTTCCTAAGGATCATCCTCTGGCG 432
Query 538 TGA 540
|||
Sbjct 433 TGA 435
> Ahg929464 jgi|Araly1|929464|scaffold_301921.1
Length=455
Score = 614 bits (332), Expect = 7e-175
Identities = 393/423 (93%), Gaps = 1/423 (0%)
Strand=Plus/Plus
Query 119 ACAATATGCATGATCGGCGCCGGAGGTTTCATCGGTTCACATCTCTGTGAAAAGCTCTTG 178
||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||
Sbjct 13 ACAATATGCATGATCGGAGCCGGAGGTTTCATCGGTTCACATCTCTGTGAAAAATTGATG 72
Query 179 ACCGAGACGCCACATAAGGTGCTTGCGCTCGATGTTTACAACGATAAGATCAAACACTTG 238
| |||||||| || ||||| |||||||| |||||||||||||| |||||||||||||||
Sbjct 73 ATGGAGACGCCTCAAAAGGTACTTGCGCTTGATGTTTACAACGAGAAGATCAAACACTTG 132
Query 239 CTTGAGCCTGATACCGTTGAATGGAGTGGTCGGATCCAGTTTCATCGTATCAATATTAAG 298
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 133 CTTGAACCTGATACCGTTGAATGGAGTGGTCGGATCCAGTTTCATCGTATCAATATTAAG 192
Query 299 CATGATTCGAGACTTGAAGGTCTTGTTAAGATGGCGGATCTGATTATAAATCTTGCTGCG 358
|||||||| || |||||||||||| |||||||||||||||||| |||| ||||||||| |
Sbjct 193 CATGATTCAAGGCTTGAAGGTCTTATTAAGATGGCGGATCTGACTATACATCTTGCTGTG 252
Query 359 ATCTGTACTCCAGCTGATTACAATACACGTCCTCTTGATACTATCTACAGCAATTTCATT 418
|||||||||||||||||||||||||||| ||||||||| || ||||||| ||||||||||
Sbjct 253 ATCTGTACTCCAGCTGATTACAATACACTTCCTCTTGAAACAATCTACAACAATTTCATT 312
Query 419 GATGCGCTTCCAGTTGTGAAATACTGTTCTGAGAACAACAAGCGTCTCATTCACTTTTCT 478
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 313 GATGCGCGTCCAGTTGTTAAATACTGTTCTGAGAACAACAAGCGTCTCATTCACTTTTCT 372
Query 479 ACCTGTGAAGTTTATGGAAAAACCATTGGAAGCTTTCTTCCTAAGGATCATCCTCTG-CG 537
||||||||||| ||||||||||||| ||| ||||||||||||||||| ||||||||| ||
Sbjct 373 ACCTGTGAAGTGTATGGAAAAACCACTGGTAGCTTTCTTCCTAAGGACCATCCTCTGGCG 432
Query 538 TGA 540
|||
Sbjct 433 TGA 435
> Ahg919938 jgi|Araly1|919938|scaffold_101219.1
Length=455
Score = 614 bits (332), Expect = 7e-175
Identities = 393/423 (93%), Gaps = 1/423 (0%)
Strand=Plus/Plus
Query 119 ACAATATGCATGATCGGCGCCGGAGGTTTCATCGGTTCACATCTCTGTGAAAAGCTCTTG 178
||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||
Sbjct 13 ACAATATGCATGATCGGAGCCGGAGGTTTCATCGGTTCACATCTCTGTGAAAAATTGATG 72
Query 179 ACCGAGACGCCACATAAGGTGCTTGCGCTCGATGTTTACAACGATAAGATCAAACACTTG 238
| |||||||| || ||||| |||||||| |||||||||||||| |||||||||||||||
Sbjct 73 ATGGAGACGCCTCAAAAGGTACTTGCGCTTGATGTTTACAACGAGAAGATCAAACACTTG 132
Query 239 CTTGAGCCTGATACCGTTGAATGGAGTGGTCGGATCCAGTTTCATCGTATCAATATTAAG 298
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 133 CTTGAACCTGATACCGTTGAATGGAGTGGTCGGATCCAGTTTCATCGTATCAATATTAAG 192
Query 299 CATGATTCGAGACTTGAAGGTCTTGTTAAGATGGCGGATCTGATTATAAATCTTGCTGCG 358
|||||||| || |||||||||||| |||||||||||||||||| |||| ||||||||| |
Sbjct 193 CATGATTCAAGGCTTGAAGGTCTTATTAAGATGGCGGATCTGACTATACATCTTGCTGTG 252
Query 359 ATCTGTACTCCAGCTGATTACAATACACGTCCTCTTGATACTATCTACAGCAATTTCATT 418
|||||||||||||||||||||||||||| ||||||||| || ||||||| ||||||||||
Sbjct 253 ATCTGTACTCCAGCTGATTACAATACACTTCCTCTTGAAACAATCTACAACAATTTCATT 312
Query 419 GATGCGCTTCCAGTTGTGAAATACTGTTCTGAGAACAACAAGCGTCTCATTCACTTTTCT 478
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 313 GATGCGCGTCCAGTTGTTAAATACTGTTCTGAGAACAACAAGCGTCTCATTCACTTTTCT 372
Query 479 ACCTGTGAAGTTTATGGAAAAACCATTGGAAGCTTTCTTCCTAAGGATCATCCTCTG-CG 537
||||||||||| ||||||||||||| ||| |||||||||||||||||||||||| || ||
Sbjct 373 ACCTGTGAAGTGTATGGAAAAACCACTGGTAGCTTTCTTCCTAAGGATCATCCTTTGGCG 432
Query 538 TGA 540
|||
Sbjct 433 TGA 435
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57097277255
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5