BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G27880.1
Length=3176
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481718 jgi|Araly1|481718|fgenesh2_kg.4__778__AT2G27880.1 4327 0.0
Ahg952311 jgi|Araly1|952311|scaffold_58000002.1 1367 0.0
> Ahg481718 jgi|Araly1|481718|fgenesh2_kg.4__778__AT2G27880.1
Length=3170
Score = 4327 bits (2343), Expect = 0.0
Identities = 2913/3181 (92%), Gaps = 67/3181 (2%)
Strand=Plus/Plus
Query 17 GTGGTGGTCACGGCGGCGCTAGTCGTGGTCGAGGAGGTGGACGAAGGTCTGACCAGAGAC 76
||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||
Sbjct 11 GTGGTGGTCACGGCGGCGCTAGTCGTGGTCGAGGA---GGACGTAGGTCTGATCAGAGAC 67
Query 77 AAGATCAGTCTTCTGGTCAAGTTGCTTGGCCGGGTTTACAACAAAGCTACGGTGGTCGTG 136
||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||
Sbjct 68 AAGATCAGTCTTCTGGTCAGGCTGCTTGGCCGGGTTTACAACAAAGCTCCGGTGGTCGTG 127
Query 137 GTGGTTCTGTTTCCGCCGGTAGAGGTCGTGGAAACGTCGGAAGAGGTGAAAATACTGGAG 196
||||||||||||| | ||||||||||||||| ||||||||||||||||||| || |||||
Sbjct 128 GTGGTTCTGTTTCTGGCGGTAGAGGTCGTGGTAACGTCGGAAGAGGTGAAACTAGTGGAG 187
Query 197 ATCTGACGGCGACGCAAGTTCCGGTTGCTTCTGCTGTTTCTGGCGGGAGAGGTCGT-G-- 253
|||||||||||||||||||||||||||| | | ||||||||||||||||||||||| |
Sbjct 188 ATCTGACGGCGACGCAAGTTCCGGTTGC-T-T-CTGTTTCTGGCGGGAGAGGTCGTGGTA 244
Query 254 --GT------AA-C-A---T--CGGAGATCCGA---CGTTTTCTGTTGCGTCTTCGTCTA 295
|| || | | | ||||||||||| || |||||||| || |||||||
Sbjct 245 ACGTCGGACGAAGCGATTCTACCGGAGATCCGACGGCGACGTCTGTTGCTTCGTCGTCTA 304
Query 296 AGACGGTGTCTGTTGCTTCTTCATCTAAAGAGGAAAGTAAGAATACGGAGGTTTCTGAGA 355
||||| |||||||| ||||||| |||||||||||||||||| ||||||||||||||||
Sbjct 305 AGACGATGTCTGTTTCTTCTTCGTCTAAAGAGGAAAGTAAGGTTACGGAGGTTTCTGAGG 364
Query 356 CCATGTCGAACCTTCAGATTACTTCGACGGAGACGAAACCTGAAATGACGTCACTTCCTC 415
| || |||| || |||||||| |||||||||||||||| |||| |||| |||||||
Sbjct 365 CTTTGGCGAAGGTTGAGATTACTCCGACGGAGACGAAACCGGAAACGACG---CTTCCTC 421
Query 416 CGGCGTCATCTAAAGCGGTTACGTTTCCGGTACGGCCAGGACGTGGTACTTTGGGGAAGA 475
||||||||||||| ||| |||||| ||||||||||||||| |||||||||||||||||||
Sbjct 422 CGGCGTCATCTAAGGCGATTACGTATCCGGTACGGCCAGGGCGTGGTACTTTGGGGAAGA 481
Query 476 AAGTCATGGTTCGTGCGAATCATTTCCTTGTTCAAGTTGCTGATCGTGATCTCTACCATT 535
||||| | |||||||||||||||||||||||||| |||||||| |||||||||| || |
Sbjct 482 AAGTCCTTATTCGTGCGAATCATTTCCTTGTTCAAATTGCTGATTGTGATCTCTATCACT 541
Query 536 ACGATGTTTCGATCAATCCTGAGGTTATATCAAAGACAGTGAACAGAAACGTGATGAAAC 595
||||||||||||| ||||| ||||| ||||||||| |||||||||| |||||||||||||
Sbjct 542 ACGATGTTTCGATTAATCCCGAGGTGATATCAAAGGCAGTGAACAGGAACGTGATGAAAC 601
Query 596 TTCTGGTTAAGAATTATAAAGACTCTCACTTGGGAGGGAAGTCACCAGCGTATGATGGAA 655
|| |||||||||| |||||||| |||||||||||||||||| | ||||||||||||||||
Sbjct 602 TTTTGGTTAAGAACTATAAAGATTCTCACTTGGGAGGGAAGGCTCCAGCGTATGATGGAA 661
Query 656 GGAAAAGCCTCTATACTGCTGGTCCATTACCTTTTGACTCGAAAGAGTTTGTTGTGAATC 715
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 662 GGAAAAGCCTCTATACTGCTGGTGCATTACCTTTTGAATCGAAAGAGTTTGTTGTGAATC 721
Query 716 TGGCGGAGAAA-AGAGCTGACGGTTCCTCTGGGAAGGACAGACCGTTTAAAGTTGCTGTA 774
||||||| ||| |||||||| ||||| ||||||||||||||| |||||||||||||| ||
Sbjct 722 TGGCGGA-AAAGAGAGCTGATGGTTCTTCTGGGAAGGACAGATCGTTTAAAGTTGCTATA 780
Query 775 AAGAAT-GTGACAAGCA-CTGATCTTTATCAGTTGCAACAGTTCCTTGATCGTAAGCAAA 832
||| | | | |||| | |||||||||||||||||||||||||||||| || | |||||
Sbjct 781 AAG-CTGGCGTCAAG-ACCTGATCTTTATCAGTTGCAACAGTTCCTTGCTCACAGGCAAA 838
Query 833 GAGAGGCTCCATATGATACTATCCAAGTGCTTGATGTTGTTCTTAGGGATAAGCCCTCTA 892
|||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 839 GAGATGCTCCATATGATACTATCCAAGTGCTTGATGTTGTTCTCAGGGACAAGCCCTCTA 898
Query 893 ATGATTATGTCTCTGTTGGGAGGTCTTTTTTCCACACTAGTTTGGGAAAGGACGCAAGAG 952
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 899 ATGATTATGTCTCTGTTGGGAGGTCTTTTTTCCACACTAGTTTGGGAAAGGACACCAGAG 958
Query 953 ATGGTAGGGGTGAGCTTGGAGATGGTATTGAGTACTGGAGAGGTTATTTCCAAAGTCTAA 1012
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 959 ATGGTAGGGGTGAGCTTGGAGATGGTATTGAGTACTGGAGAGGTTTTTTCCAAAGTCTAA 1018
Query 1013 GGCTGACTCAGATGGGTTTGTCTCTGAACATTGACGTTTCAGCAAGATCATT-TTATGAA 1071
||||||||||||||||||||||||| ||||| |||||||||||||||||||| || ||||
Sbjct 1019 GGCTGACTCAGATGGGTTTGTCTCTTAACATCGACGTTTCAGCAAGATCATTCTT-TGAA 1077
Query 1072 CCGATTGTTGTCACTGACTTTATTAGCAAGTTTCTGAATATAAGGGACTTAAACAGGCCA 1131
|| || ||||||||||| |||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1078 CCAATCGTTGTCACTGAGTTTATTAGCAAGTTTCTGAATATAAGAGACTTAAACAGACCA 1137
Query 1132 CTTAGAGACTCAGATCGACTTAAGGTGAAGAAAGTTTTGAGGACACTGAAAGTTAAGTTG 1191
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1138 CTTAGAGACTCAGATCGACTTAAGGTGAAGAAAGTTTTGAGGACACTAAAAGTTAAGTTG 1197
Query 1192 CTTCACTGGAACGGCACAAAAAGTGCCAAAATTAGTGGGATTTCTAGTCT-ACCCATCAG 1250
|| || |||||| |||||||||||||||| |||||||||||||| || || ||||||||
Sbjct 1198 CTACATTGGAACAGCACAAAAAGTGCCAAGATTAGTGGGATTTCCAG-CTGTCCCATCAG 1256
Query 1251 GGAGCTAAGGTTCACTCTGGAGGACAAATCAGAGAAGACGGTTGTTCAATATTTTGCTGA 1310
|||||||||||||| | |||||||||||||||||||||||| | ||||||||||||||
Sbjct 1257 TCAGCTAAGGTTCACTTTAGAGGACAAATCAGAGAAGACGGTTATACAATATTTTGCTGA 1316
Query 1311 AAAATATAATTATAGAGTGAAATACCAGGCTCTACCTGCTATTCAAACAGGGAGTGACAC 1370
|||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||
Sbjct 1317 AAAATATAATTATAGAGTGATATACCCGGCTCTACCTGCTATTCAAACTGGGAGTGACAC 1376
Query 1371 AAGACCCGTCTACCTACCAATGGAGCTCTGCCAAATTGACGAAGGGCAAAGATACACCAA 1430
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1377 AAGACCCGTCTACCTACCGATGGAACTCTGCCAAATTGACGAAGGGCAAAGATACACCAA 1436
Query 1431 AAGGCTCAATGAGAAGCAAGTGACTGCATTGCTAAAAGCTACCTGCCAACGACCCCCTGA 1490
|||||| |||||||||||||||||||| ||||||| |||||||||||||||||| | ||
Sbjct 1437 AAGGCTTAATGAGAAGCAAGTGACTGCGTTGCTAAGAGCTACCTGCCAACGACCTCAAGA 1496
Query 1491 TAGAGAGAACTCGATCAAAAACTTGGTTGTGAAAAATAA-T-T-ACAATG---ATGATCT 1544
|||||||||||||||||||||||||||||||||||||| | | || ||| ||| |||
Sbjct 1497 CAGAGAGAACTCGATCAAAAACTTGGTTGTGAAAAATAATTATAACGATGTTCATGGTCT 1556
Query 1545 GAGCAAGGAGTTTGGGATGTCAGTGACTACCCAACTAGCCTCGATTGAAGCTCGTGTACT 1604
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1557 GAGCAAGGAGTTTGGGATGTCAGTGACTAGCCAACTAGCCTCGATTGAAGCTCGTGTACT 1616
Query 1605 TCCCCCACCGATGTTGAAGTACCATGACAGTGGTAAAGAGAAAATGGTAAATCCAAGGCT 1664
||| ||||||||||||||||||||||| || |||| |||||| ||||| |||||||| ||
Sbjct 1617 TCCTCCACCGATGTTGAAGTACCATGAAAGCGGTAGAGAGAAGATGGTCAATCCAAGCCT 1676
Query 1665 AGGACAGTGGAACATGATTGACAAGAAAATGGTTAATGGAGCAAAAGTCACTTCTTGGAC 1724
||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||
Sbjct 1677 AGGACAGTGGAACATGATTAACAAGAAAATGGTTAATGGAGCAAGAGTTGCATCTTGGAC 1736
Query 1725 TTGCGTAAGTTTCTCTACTCGGATTGACCGTGGTTTACCCCAAGAGTTCTGCAAACAGTT 1784
|||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1737 TTGCGTAAATTTCTCTACGCGGATTGACCGGGGTTTACCCCAAGAGTTCTGCAAACAATT 1796
Query 1785 GATTGGGATGTGTGTCAGCAAAGGAATGGAATTTAAGCCTCAACCTGCTATTCCGTTCAT 1844
|| ||||||||| || |||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1797 GACTGGGATGTGCGTGAGCAAAGGAATGGAATTTAATCCACAACCTGCTATTCCGTTCAT 1856
Query 1845 CTCTTGTCCCCCT-GAACATATTGAGGAAGCTCTTC-TCGATATCCACAAAAGGGCACCT 1902
|||| ||| ||| || | |||||||||||||||| | ||||||||||| |||||||||
Sbjct 1857 TTCTTATCCGCCTCAAAGA-ATTGAGGAAGCTCTTCAT-GATATCCACAATAGGGCACCT 1914
Query 1903 GGTCTCCAACTGTTGATTGTAATATTGCCTGATGTGACTGGATCATATGGAAAAATAAAA 1962
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 1915 GGTCTCCAACTGTTGATTGTAATATTGCCTGATGTGACTGGATCATATGGACAAATCAAA 1974
Query 1963 AGGATCTGTGAAACAGAATTGGGGATTGTCTCTCAGTGTTGCCAACCTAGACAAG-TTAA 2021
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||
Sbjct 1975 AGGATCTGTGAAACAGAATTGGGGATCGTCTCTCAGTGTTGCCAACCAAGACAAGCTT-C 2033
Query 2022 TAAACTCAACAAGCAGTACATGGAAAATGTTGCCTTGAAGATCAATGTCAAGACTGGGGG 2081
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2034 TAAACTCAATAAGCAGTACATGGAAAATGTTGCCTTGAAGATTAATGTCAAGACTGGGGG 2093
Query 2082 AAGGAACACTGTTCTTAATGATGCTATTAGAAGAAACATACCTCTTATTACTGATCGTCC 2141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2094 AAGGAACACTGTTCTTAATGATGCTATTAGAAGAAACATACCTCTTATTACTGATCGCCC 2153
Query 2142 AACCATCATCATGGGTGCTGATGTGACTCACCCACAGCCTGGAGAGGACTCAAGTCCTTC 2201
|||||| |||||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct 2154 AACCATAATCATGGGTGCTGATGTGACTCACCCGCAACCTGGAGAGGACTCGAGTCCTTC 2213
Query 2202 TATTGCTGCTGTTGTGGCCTCTATGGACTGGCCTGAGATAAAC-AAATACCGAGGATTGG 2260
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||
Sbjct 2214 TATTGCTGCTGTTGTGGCCTCTATGGACTGGCCTGAGAT-AACTAAATACCGAGGACTGG 2272
Query 2261 TTTCTGCTCAAGCTCATAGGGAAGAAATTATTCAGGACCTGTATAAGCTGGTTCAGGATC 2320
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2273 TTTCTGCTCAAGCTCATAGGGAAGAAATTATCCAGGACCTGTATAAGCTGGTTCAGGATC 2332
Query 2321 CACAACGTGGGCTAGTCCACTCTGGTTTGATAAGGGAACATTTCATAGCATTCAGGAGAG 2380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2333 CACAACGTGGGCTAGTCCACTCTGGTTTGATAAGGGAACATTTCATAGCATTCAGGAGAG 2392
Query 2381 CTACAGGCCAGATACCTCAAAGGATCATCTTCTATCGTGACGGAGTAAGCGAAGGGCAGT 2440
|||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 2393 CTACGGGCCAGATACCTCAAAGGATTATCTTCTATCGCGACGGAGTAAGCGAAGGGCAGT 2452
Query 2441 TTAGTCAGGTTCTGCTACATGAGATGACTGCTATCCGCAAGGCTTGTAACTCTCTCCAAG 2500
|||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||
Sbjct 2453 TTAGTCAGGTTCTGCTGCATGAGATGACAGCTATACGAAAGGCTTGTAACTCTCTCCAAG 2512
Query 2501 AGAATTATGTTCCTCGTGTTACTTTCGTGATTGTCCAGAAACGTCACCACACACGTTTGT 2560
|||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 2513 AGAACTATGTTCCTCGTGTCACTTTCGTGATTGTCCAGAAACGTCACCACACTCGTTTGT 2572
Query 2561 TCCCTGAGCAACACGGGAATCGTGATATGACTGATAAGAGTGGCAATATTCAACCAGGTA 2620
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 2573 TCCCTGAGCAACACGGGAATCGTGATACGACTGATAAAAGTGGCAATATTCAACCAGGTA 2632
Query 2621 CTGTCGTGGACACTAAAATCTGTCACCCTAATGAATTCGACTTCTATTTGAACAGCCATG 2680
||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||||| |
Sbjct 2633 CTGTCGTTGACACTACAATCTGTCACCCGAATGAGTTCGACTTCTATTTGAACAGCCACG 2692
Query 2681 CTGGTATTCAGGGAACAAGCAGGCCGGCACATTACCATGTACTTCTCGATGAGAACGGTT 2740
|||||||||||||||||||||||||||| ||||||||||| || ||||| |||||| |||
Sbjct 2693 CTGGTATTCAGGGAACAAGCAGGCCGGCTCATTACCATGTTCTCCTCGACGAGAACCGTT 2752
Query 2741 TCACCGCTGATCAGTTGCAAATGCTCACAAACAACCTCTGCTACACGTATGCGAGGTGTA 2800
|||| ||||||||||||||||||||||| |||||||| |||||||||| ||||||||| |
Sbjct 2753 TCACTGCTGATCAGTTGCAAATGCTCACCAACAACCTTTGCTACACGTTTGCGAGGTGCA 2812
Query 2801 CAAAATCTGTGTCAATTGTGCCACCAGCCTACTACGCTCACTTGGCTGCATTCCGTGCCC 2860
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2813 CAAGATCTGTGTCAATTGTGCCACCAGCCTACTACGCTCACTTGGCTGCTTTCCGTGCCC 2872
Query 2861 GCTACTACATGGAGAGTGAGATGTCTGATGGAGGTTCGAGCAGGTCCAGGAGCTCAACAA 2920
|||||||||||||||||||||||||||||||||| ||||||||||| |||| | ||||||
Sbjct 2873 GCTACTACATGGAGAGTGAGATGTCTGATGGAGGCTCGAGCAGGTCGAGGAACACAACAA 2932
Query 2921 CAGGTGTGGGTCAAGTCATTTCGCAGCTCCCAGCAATAAAAGATAACGTCAAGGAGGTTA 2980
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2933 CAGGTGCGGGTCAAGTCATTTCGCAGCTCCCAGCAATAAAAGATAACGTCAAGGACGTTA 2992
Query 2981 TGTTTTATTGCTAATGATTCA-CTTCTTCTCTTG-CCAGTTTTAAAAGCCGTTAATAATT 3038
||||||| |||| ||||| | ||||||||||| ||||||| |||||||||||||| ||
Sbjct 2993 TGTTTTACTGCTGATGATACTTCTTCTTCTCTTTACCAGTTTCAAAAGCCGTTAATACTT 3052
Query 3039 -ATGAAAA----CTATATTCGGCTCTCGGTT--ATCTCTTTTGGGTTTGGCTGTTAATAT 3091
| |||| |||||| |||||| |||| | | ||||||||||||||||| ||| |
Sbjct 3053 CAAAAAAAAAAACTATATGCGGCTCG-GGTTTGACCACTTTTGGGTTTGGCTGTGAATGT 3111
Query 3092 TTTGAAGGAT-CTGGCCAACTTTTGCGCCTTAGGACTTATGTTATGCGTTTTGGTTTCAG 3150
|||||||||| | ||||||||||| | | ||||||||||| |||||||||||| ||| ||
Sbjct 3112 TTTGAAGGATTC-GGCCAACTTTTTCTC-TTAGGACTTATATTATGCGTTTTGTTTTAAG 3169
Query 3151 A 3151
|
Sbjct 3170 A 3170
> Ahg952311 jgi|Araly1|952311|scaffold_58000002.1
Length=884
Score = 1367 bits (740), Expect = 0.0
Identities = 836/883 (95%), Gaps = 3/883 (0%)
Strand=Plus/Plus
Query 2132 CTGATCGTCCAACCATCATCATGGGTGCTGATGTGACTCACCCACAGCCTGGAGAGGACT 2191
||||||| |||||||| ||||||||||||||||||||||| || || |||||||||||||
Sbjct 1 CTGATCGCCCAACCATAATCATGGGTGCTGATGTGACTCATCCGCAACCTGGAGAGGACT 60
Query 2192 CAAGTCCTTCTATTGCTGCTGTTGTGGCCTCTATGGACTGGCCTGAGATAAAC-AAATAC 2250
| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 61 CGAGTCCTTCTATTGCTGCTGTTGTGGCCTCTATGGACTGGCCTGAGAT-AACTAAATAC 119
Query 2251 CGAGGATTGGTTTCTGCTCAAGCTCATAGGGAAGAAATTATTCAGGACCTGTATAAGCTG 2310
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 120 CGAGGACTGGTTTCTGCTCAAGCTCATAGGGAAGAAATTATCCAGGACCTGTATAAGCTG 179
Query 2311 GTTCAGGATCCACAACGTGGGCTAGTCCACTCTGGTTTGATAAGGGAACATTTCATAGCA 2370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 GTTCAGGATCCACAACGTGGGCTAGTCCACTCTGGTTTGATAAGGGAACATTTCATAGCA 239
Query 2371 TTCAGGAGAGCTACAGGCCAGATACCTCAAAGGATCATCTTCTATCGTGACGGAGTAAGC 2430
|||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 240 TTCAGGAGAGCTACGGGCCAGATACCTCAAAGGATTATCTTCTATCGCGACGGAGTAAGC 299
Query 2431 GAAGGGCAGTTTAGTCAGGTTCTGCTACATGAGATGACTGCTATCCGCAAGGCTTGTAAC 2490
|||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct 300 GAAGGGCAGTTTAGTCAGGTTCTGCTGCATGAGATGACTGCTATACGAAAGGCTTGTAAC 359
Query 2491 TCTCTCCAAGAGAATTATGTTCCTCGTGTTACTTTCGTGATTGTCCAGAAACGTCACCAC 2550
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 360 TCTCTCCAAGAGAACTATGTTCCTCGTGTCACTTTCGTGATTGTCCAGAAACGTCACCAC 419
Query 2551 ACACGTTTGTTCCCTGAGCAACACGGGAATCGTGATATGACTGATAAGAGTGGCAATATT 2610
|| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 420 ACTCGTTTGTTCCCTGAGCAACACGGGAATCGTGATACGACTGATAAAAGTGGCAATATT 479
Query 2611 CAACCAGGTACTGTCGTGGACACTAAAATCTGTCACCCTAATGAATTCGACTTCTATTTG 2670
||||||||||||||||| ||||||| |||||||||||| ||||| |||||||||||||||
Sbjct 480 CAACCAGGTACTGTCGTTGACACTACAATCTGTCACCCGAATGAGTTCGACTTCTATTTG 539
Query 2671 AACAGCCATGCTGGTATTCAGGGAACAAGCAGGCCGGCACATTACCATGTACTTCTCGAT 2730
|||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct 540 AACAGCCATGCTGGTATTCAGGGAACAAGCAGGCCGGCGCATTACCATGTTCTCCTCGAC 599
Query 2731 GAGAACGGTTTCACCGCTGATCAGTTGCAAATGCTCACAAACAACCTCTGCTACACGTAT 2790
|||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 600 GAGAACCGTTTCACTGCTGATCAGTTGCAAATGCTCACCAACAACCTCTGCTACACGTTT 659
Query 2791 GCGAGGTGTACAAAATCTGTGTCAATTGTGCCACCAGCCTACTACGCTCACTTGGCTGCA 2850
|||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GCGAGGTGCACAAGATCTGTGTCAATTGTGCCACCAGCCTACTACGCTCACTTGGCTGCT 719
Query 2851 TTCCGTGCCCGCTACTACATGGAGAGTGAGATGTCTGATGGAGGTTCGAGCAGGTCCAGG 2910
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 720 TTCCGTGCCCGCTACTACATGGAGAGTGAGATGTCTGATGGAGGCTCGAGCAGGTCGAGG 779
Query 2911 AGCTCAACAACAGGTGTGGGTCAAGTCATTTCGCAGCTCCCAGCAATAAAAGATAACGTC 2970
| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 AACACAACAACAGGTGCGGGTCAAGTCATTTCGCAGCTCCCAGCAATAAAAGATAACGTC 839
Query 2971 AAGGAGGTTATGTTTTATTGCTAATGATTCA-CTTCTTCTCTT 3012
||||| ||||||||||| |||| ||||| | |||||||||||
Sbjct 840 AAGGACGTTATGTTTTACTGCTGATGATACTTCTTCTTCTCTT 882
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119984271750
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5