BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G28280.1
Length=1717
Score E
Sequences producing significant alignments: (Bits) Value
Ahg900496 jgi|Araly1|900496|Al_scaffold_0004_1146 1234 0.0
Ahg327685 jgi|Araly1|327685|fgenesh1_pm.C_scaffold_6002905 326 4e-88
Ahg930559 jgi|Araly1|930559|scaffold_303016.1 135 8e-31
Ahg481680 jgi|Araly1|481680|fgenesh2_kg.4__740__AT2G28290.1 134 3e-30
Ahg333398 jgi|Araly1|333398|fgenesh1_pm.C_scaffold_769000001 119 8e-26
Ahg318446 jgi|Araly1|318446|fgenesh1_pm.C_scaffold_3001462 119 8e-26
Ahg342698 jgi|Araly1|342698|fgenesh1_pg.C_scaffold_3002461 67.6 3e-10
> Ahg900496 jgi|Araly1|900496|Al_scaffold_0004_1146
Length=1275
Score = 1234 bits (668), Expect = 0.0
Identities = 1047/1217 (86%), Gaps = 77/1217 (6%)
Strand=Plus/Plus
Query 334 ATGGGCCTTGA-CCCATTACCATAAAGCCCAAATTGAAAAAGATAAG-TTATATCACTAA 391
||||||||||| |||||||| |||||||||||||| |||| || ||||||||| |
Sbjct 1 ATGGGCCTTGAGCCCATTACTATAAAGCCCAAATT--CAAAG---AGCTTATATCAC-CA 54
Query 392 AAGAGGGCGTGAAGAGA---TGGATTGATAGACACGGAAAAGAGAGA---GAGATTTTGG 445
|||| || |||||| ||||||||||||||||||||||||||| | || || |
Sbjct 55 AAGA-CCCG-CAAGAGATGGTGGATTGATAGACACGGAAAAGAGAGATTTGCGAGGTTAG 112
Query 446 GAGATTCGATTCGAAGATGTTCGATCTTCCAATTGATATGGAGGAGGAGGTGCTCTCTAG 505
| | || ||| |||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 113 G-G-TTGGATCCGAAGATGTTAGATCTTCCAAGTGATATGGAGGAGGAGGTGCTCTCTAG 170
Query 506 GGTTCCGGTGAAATCTCTGGGGAAACTGCGATTGACCTGCAAAAAGTGGAACACTATAAC 565
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 171 GGTTCCGGTGACATCTCTGGGGAAACTGCGATTGACCTGTAAAAAGTGGAACACTTTAAC 230
Query 566 GAAAAGTGAGAGCTTTTTAAAGAAGAAACAGAGGAATGGAATTGAGGTGGTGATGATGAT 625
|||||||||||||||||| | ||| | | |||||||||||||||||||||| || |
Sbjct 231 GAAAAGTGAGAGCTTTTT--A-AAG----A-A-GAATGGAATTGAGGTGGTGATGCTGGT 281
Query 626 GGACTATAGAGTTTCCTTGATGAGCGTAGATCTACTCTCTCCGTCTATAGATCCTATAGG 685
||| | ||||||||||||||||| ||| ||| |||||| |||||||||||| | ||| ||
Sbjct 282 GGAATCTAGAGTTTCCTTGATGACCGTCGATTTACTCTATCCGTCTATAGAGCGTATCGG 341
Query 686 TAATCTCAATGCAGATGGAATCAAAATATCTAAAATCTTTCACTGCCAAGGGTTTATTCT 745
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 342 TAATCTCGATGCAGATGGAATCAAAATATCTAAAATCTTTCACTGCCAAGG-TTTATTCT 400
Query 746 TATGCATCAACAAGGACAGAGACAAAGACTCTTCTAGGGTTGTTGTTTGGAACCCTTATT 805
|||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||| ||
Sbjct 401 TATGCATCAACAAGGACAAAGACAAAGACTCCTCTAGGCTTGTTGTTTTGAACCCTTTTT 460
Query 806 TGGGACAAACAAGGTATATCGAATTACCTAGAAATTCTATCT-ACCACA-A-GTGCGTGA 862
|||||||||||||||||||||||||||||||||||||| ||| |||||| | | | | ||
Sbjct 461 TGGGACAAACAAGGTATATCGAATTACCTAGAAATTCT-TCTTACCACATACG-G-GAGA 517
Query 863 AGTACGCTCTCGGATACGAGAAAAAGAATCACAAAATCTTGAGATTCGTGAATGAGTACT 922
|||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 518 AGTACGCTCTGGGATACGAGAAAAAGAATCACAAAGTCTTGAGATTTGTGAATGAGTACT 577
Query 923 TGGAGACCAGTAGG-GACCGAATTCGTGAGCTTCAGATTTACAGTTTATACTCCAATTCA 981
|||| |||| || ||||||||| ||||||||||||| ||||||||| |||||||||||
Sbjct 578 ACGAGATCAGT-GGCGACCGAATTTGTGAGCTTCAGATGTACAGTTTAAACTCCAATTCA 636
Query 982 TGGGAGGTCATTGATGATTTCACTCCAGACTGGTATATTTTGTA-CAAACACAGTGGCGT 1040
||| |||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||||
Sbjct 637 TGGAAGGTCATTGATGATTTCACTCCGGACTGGTATATTTCGTATCAAT-ACAGTGGCGT 695
Query 1041 GTCTCTAAAGGGAAACACTTACTGGTATGCCCTAGAAGAGATCCCATTTCATGGTCT-AC 1099
|||| ||||||| ||||||||||||||||| | ||| |||||||||||| |||||| |
Sbjct 696 GTCTATAAAGGGCAACACTTACTGGTATGCTCAAGATGAGATCCCATTTGATGGTCGGAT 755
Query 1100 CATCACTAGATCACCCTGATTTTCTACTATCCTTTGATTT--CAA--GA----TTTGAAC 1151
|||| |||||| || |||||||||||||||||||||| ||| || |||| ||
Sbjct 756 -ATCA---GATCACTCTAATTTTCTACTATCCTTTGATTTTACAACCGAGAGATTTGGAC 811
Query 1152 CGCGTCTGCCTCTGCCTTTCCGA-GCCGTATTTGGAGATACTGTGACGCTTGCTAGTGTT 1210
||||||||||||||||||||| | || | | | || ||| ||| || || ||||||||
Sbjct 812 CGCGTCTGCCTCTGCCTTTCC-ACGCTTTCTATAGACATAATGTCACTTTTTCTAGTGTT 870
Query 1211 AGAGAAGAGCAGCTTGCGGTGCTGTTTCAC-CG-G----G--C---AT-CCGTCGTCGAG 1258
||||||||||||||||| || |||||||| | | | | || |||||||| ||
Sbjct 871 AGAGAAGAGCAGCTTGCAGTACTGTTTCAGTCAAGATATGAACTTGATTCCGTCGTCAAG 930
Query 1259 ATATGGATTACTAATAAGATTGAGCCTAATGCAGTGTCGTGGAGCAACTTGTTATTTGCT 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 931 ATATGGATTACTAATAAGATTGAGCCTAATGCAGTGTCGTGGAGCAACTTGTTGTTTGCT 990
Query 1319 GTTGATATGAAACCAGTCGCTGGTTTTTGGTTTCCTAATGTCGGTAGGAGTTTCTTCGTT 1378
||||||||||||||||||||||||||| ||||||| |||||| | ||||||||||||||
Sbjct 991 GTTGATATGAAACCAGTCGCTGGTTTTCAGTTTCCTTATGTCGCTGGGAGTTTCTTCGTT 1050
Query 1379 GACGAGGAGAAGAAGGTCGCGGTTGTTCTTGATAAAGAGATAATAGACAAATGTCACCTT 1438
|||||||| ||||||||||||||||| ||||||||||| | || | | |||||||
Sbjct 1051 GACGAGGATAAGAAGGTCGCGGTTGTGGTTGATAAAGAGG-A-TA-A-A--TGTCACC-- 1102
Query 1439 CCCGCTCGCAATATTGCTTACATCATTGGAAATAATGGAATCTTGAGTAAAGTGGATCTT 1498
| || ||| || | ||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 1103 C----TCACAACATAGTTTACATCATTGGAGATAATGGAATCTTGAATAAAGTGGATCTA 1158
Query 1499 GGCGAATCTAGAGACAA 1515
|||||||||| ||||||
Sbjct 1159 GGCGAATCTACAGACAA 1175
> Ahg327685 jgi|Araly1|327685|fgenesh1_pm.C_scaffold_6002905
Length=1017
Score = 326 bits (176), Expect = 4e-88
Identities = 596/782 (76%), Gaps = 95/782 (12%)
Strand=Plus/Plus
Query 831 ACCTAGAAATTCTATCTACCACAAGTGCGTGA-A-GTACGCTCTCGGATACGAGA--AA- 885
||| |||||||| | || ||||| || | || | |||||||||||||||||||| ||
Sbjct 246 ACCCAGAAATTC--T-TATCACAAATG-G-GACAGGTACGCTCTCGGATACGAGACCAAC 300
Query 886 AAGAA-T-CAC-AAAATCTTGAGATTCGTGAATGAGT-ACTTGGAGACCAGT-AGGGACC 940
||||| | | | ||| |||||||||| || ||| | | || || | || | |||
Sbjct 301 AAGAATTACTCGAAAGTCTTGAGATTTGTTAAT-AATCACGACCCGAAC-GTGAATCACC 358
Query 941 GAATTCGTGAGCTTCAGATTTACAGTTTATACTCCAATTCATGGGAGG-TCATTGATGAT 999
||||| ||||| || | || ||| | || | | | ||||||| ||| || ||||||||
Sbjct 359 GAATTTGTGAGTTTGAAATCTAC--TCTA-A-TTC--TTCATGGAAGGTTC-TTGATGAT 411
Query 1000 TTCACTCCAGACTGGTATATTTTGTACAAACACAGTGGCGTGTCTCTAAAGGGAAACACT 1059
||| || |||||| ||| | || || ||| ||||| ||||||||||||| ||||||
Sbjct 412 CTCAATCTGGACTGGGCTATATCGTTTAATCACCGTGGCTTGTCTCTAAAGGGCAACACT 471
Query 1060 TACTGGTATGCCCTAGA-AG-AGATCCCA-TTTCATGGT-CT--ACCA-TC--ACTAGAT 1110
|| ||||||| || || || |||| | | || ||||| || ||| || | ||||
Sbjct 472 TATTGGTATG--CTCGACAGAAGAT-CGACTTAGATGGTCCTCCTCCAGTCATAAGAGAT 528
Query 1111 CACCCTGATTTTCTACTATCCTTTGA-TTT-----C-A-AGATTTGAACCGCGTCTGCCT 1162
| ||||||||| ||||| || ||||| ||| | | ||||||| ||||| |||||||
Sbjct 529 CTCCCTGATTTCCTACTCTCTTTTGATTTTACAACCGAGAGATTTGGACCGCTTCTGCCT 588
Query 1163 CTGCCTTTCCGA-GCCGTATTTGGAGATACTGTGACGCTTGCTAGTGTTAGAGAAGAGCA 1221
|||||||||| | || | |||||||||||||| || ||| |||||||||||||| ||||
Sbjct 589 CTGCCTTTCC-ACGCTTTCTTTGGAGATACTGTCACTCTTTCTAGTGTTAGAGAAAAGCA 647
Query 1222 GCTTGCGGTGCTGTTTC----A-CCGG-G--C----ATCCGTCGTCGAGATATGGATTAC 1269
|||||| |||||||||| | | || | | || | |||| ||||||||||||
Sbjct 648 GCTTGCCGTGCTGTTTCAGAAATCTGGTGTACATGGATACACCGTCAAGATATGGATTAG 707
Query 1270 TAATAAGATTGAGCCTAATGCAGTGTCGT--GG-AGCAACTTGTTATTTGCTGTTGATAT 1326
|| |||||||||||| ||||||||||||| || |||| |||||| || |||||||||||
Sbjct 708 TACTAAGATTGAGCCCAATGCAGTGTCGTGGGGAAGCAGCTTGTTCTTAGCTGTTGATAT 767
Query 1327 GAAACCAGTCGCTGGTTTTTGGTTTCCTAATGTCGGTAGGAGTTTCTTCGTTGACGAGGA 1386
||||||| || |||| | ||| | | || ||| ||||||||||||||||||||
Sbjct 768 GAAACCACTCACTGG----T--TTT-C----G-CGCTAGCAGTTTCTTCGTTGACGAGGA 815
Query 1387 GAAGAAGGTCGCGGTTGTTCTTGATAAAGAGATAATAGACAAATGTCACCTTCCCGCTCG 1446
|||||| ||||| || ||||||||| || ||| | | | || | | ||||
Sbjct 816 GAAGAACGTCGCTGTGGTTCTTGAT-AA-AGACAGT-G------GT-A-AAT----CTCG 860
Query 1447 CAATATTGCTTACATCATTGGAAATAATGGAAT-CTTGAGTA-AAGTGGATCTTGGCGAA 1504
||| |||||||||||||||||||| ||||| || ||||| | ||||||||||||| |||
Sbjct 861 CAACATTGCTTACATCATTGGAAAGAATGG-ATACTTGA-AACAAGTGGATCTTGGTGAA 918
Query 1505 TCTAGAGA-CAAGTTTTGTTACCCACTTGTGTGCTCTTATGTTCCAAGCTCAGTGCAAAT 1563
|||||| | ||| || ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 919 TCTAGAAACCAA-TTCTGTTACCCACTTGTGTGCTCTTATGTTCCAAGCTCTCTGCAAAT 977
Query 1564 CC 1565
||
Sbjct 978 CC 979
> Ahg930559 jgi|Araly1|930559|scaffold_303016.1
Length=1149
Score = 135 bits (73), Expect = 8e-31
Identities = 159/199 (80%), Gaps = 11/199 (6%)
Strand=Plus/Plus
Query 1366 GAGTTTCTTCGTTGACGAGGAGAAGAAGGTCGCGGTTGTTCTTGATAAAGAGATAATAGA 1425
|||||||||| ||||||||||||| || ||||| |||||| ||||| || ||| || |||
Sbjct 930 GAGTTTCTTCATTGACGAGGAGAATAAAGTCGCCGTTGTTTTTGAT-AA-AGACAA-AGA 986
Query 1426 CAAATGTCACCTTCCC-GCTCGCAATATTGCTTACATCATTGGAAAT-AATGGAATCTTG 1483
| | | | ||| ||||||| | ||||||||| |||| | | |||||||||||
Sbjct 987 -AGGTTTAATGAACCCTACTCGCAACGTAGCTTACATCGTTGG-AGTGGATGGAATCTTG 1044
Query 1484 AGTA-AAGTGGATCTTGGCGAATCTAG-AGACAAGTTTTGTTACCCACTTGTGTGCTCTT 1541
| | ||||||||||||| | |||| | || ||| |||||||||||||||||||||||||
Sbjct 1045 -GAAGAAGTGGATCTTGGAGTATCT-GCAGCCAAATTTTGTTACCCACTTGTGTGCTCTT 1102
Query 1542 ATGTTCCAAGCTCAGTGCA 1560
||||||| || | ||||||
Sbjct 1103 ATGTTCCGAGTTTAGTGCA 1121
> Ahg481680 jgi|Araly1|481680|fgenesh2_kg.4__740__AT2G28290.1
Length=10552
Score = 134 bits (72), Expect = 3e-30
Identities = 78/81 (96%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 160 CAAATTAGAGATCCGGCTCGAGAAGACGAAGCAGAAGTGAAATTTCAGGTGAGAAACGTT 219
||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 81 CAAATTAGAGATCGGGCTCTAGGAGACGAAGCAGAAGTGAAATTTCAGGTGAGAAACGTT 22
Query 220 GAGAGCTGACAAGTGAAGAAG 240
|||||||||||||||||||||
Sbjct 21 GAGAGCTGACAAGTGAAGAAG 1
> Ahg333398 jgi|Araly1|333398|fgenesh1_pm.C_scaffold_769000001
Length=924
Score = 119 bits (64), Expect = 8e-26
Identities = 321/438 (73%), Gaps = 45/438 (10%)
Strand=Plus/Plus
Query 1142 AGATTTGAACCGCGTCTGCCTCTGCCTTTCCGAGCCGTATTT-GGA--GATACTGTGACG 1198
||||||| |||||| || ||||||||||| || | | ||| | |||| ||||| |
Sbjct 472 AGATTTGGACCGCGACTTCCTCTGCCTTT-TGA--CATTTTTATAATCGATAATGTGA-G 527
Query 1199 -CT-TGCTAGTGTTAGAGAAGAGCAGCTTGCGGTGCTGTTTCACC---GG--G-CATCCG 1250
|| | | |||||||||||||||||||||| |||| | ||||| || | || |
Sbjct 528 TCTCT-CGAGTGTTAGAGAAGAGCAGCTTGTGGTGTTACATCACCAATGGATGAAAT-TG 585
Query 1251 TCG-TCGAGATATGGATTACTAATAAGATTGAGCCTAATGCAGTGTCGTGGAGCAACTTG 1309
| | ||||||||| ||| ||||||||||||||||||||||||||||||||| || |||
Sbjct 586 AGGATGGAGATATGGGTTAGTAATAAGATTGAGCCTAATGCAGTGTCGTGGAGAAAGTTG 645
Query 1310 TTATTTGCTGTTGATATGAAACCAGT-CGCTGGTTTTTGGTTTCCTAATGTCGGTAGGAG 1368
||| | ||| |||||| |||| | | || | | | | |||| | || | | ||||
Sbjct 646 TTAGA-G--GTTAATATGAGACCATTAC-CTCGATATCGTTTTCGTCTTGACCATGGGAG 701
Query 1369 TTTCTTCGTTGACGAGGAGAAGAAGGTCGCGGTTGTTCTTGATAAAGA-GATAATAGACA 1427
||||||| |||||||| |||| ||||||| || ||||| |||||||| || | ||||
Sbjct 702 TTTCTTCATTGACGAGAAGAATAAGGTCGTTGTGGTTCTGGATAAAGACGA-AG-AGACG 759
Query 1428 -AATGTCACCTTCCCGCTCGCAATATTGCTTACATCATTGGAAATAATGGA-ATCTTGAG 1485
|| ||| | || | || | ||| |||||||| | ||||| || || |
Sbjct 760 GAA----ACC--C--GCAA-CT-TAGT--TTATTTCATTGGAGAGGATGGATAT-TTCAA 806
Query 1486 TA-AAGTGGATCTTGGCGAATCTAGAGACAAGTTTTGTTAC-CCACTTGTGTGCTCTTAT 1543
| ||||||| || || |||||||||| ||| | ||| | ||| ||||| ||||||||
Sbjct 807 -AGAAGTGGAACTGGGAGAATCTAGAGGCAAAAATGGTT-CTCCATTTGTGAGCTCTTAT 864
Query 1544 GTTCCAAGCTCAGTGCAA 1561
|||||||| |||||||||
Sbjct 865 GTTCCAAGTTCAGTGCAA 882
> Ahg318446 jgi|Araly1|318446|fgenesh1_pm.C_scaffold_3001462
Length=918
Score = 119 bits (64), Expect = 8e-26
Identities = 321/438 (73%), Gaps = 45/438 (10%)
Strand=Plus/Plus
Query 1142 AGATTTGAACCGCGTCTGCCTCTGCCTTTCCGAGCCGTATTT-GGA--GATACTGTGACG 1198
||||||| |||||| || ||||||||||| || | | ||| | |||| ||||| |
Sbjct 466 AGATTTGGACCGCGACTTCCTCTGCCTTT-TGA--CATTTTTATAATCGATAATGTGA-G 521
Query 1199 -CT-TGCTAGTGTTAGAGAAGAGCAGCTTGCGGTGCTGTTTCACC---GG--G-CATCCG 1250
|| | | |||||||||||||||||||||| |||| | ||||| || | || |
Sbjct 522 TCTCT-CGAGTGTTAGAGAAGAGCAGCTTGTGGTGTTACATCACCAATGGATGAAAT-TG 579
Query 1251 TCG-TCGAGATATGGATTACTAATAAGATTGAGCCTAATGCAGTGTCGTGGAGCAACTTG 1309
| | ||||||||| ||| ||||||||||||||||||||||||||||||||| || |||
Sbjct 580 AGGATGGAGATATGGGTTAGTAATAAGATTGAGCCTAATGCAGTGTCGTGGAGAAAGTTG 639
Query 1310 TTATTTGCTGTTGATATGAAACCAGT-CGCTGGTTTTTGGTTTCCTAATGTCGGTAGGAG 1368
||| | ||| |||||| |||| | | || | | | | |||| | || | | ||||
Sbjct 640 TTAGA-G--GTTAATATGAGACCATTAC-CTCGATATCGTTTTCGTCTTGACCATGGGAG 695
Query 1369 TTTCTTCGTTGACGAGGAGAAGAAGGTCGCGGTTGTTCTTGATAAAGA-GATAATAGACA 1427
||||||| |||||||| |||| ||||||| || ||||| |||||||| || | ||||
Sbjct 696 TTTCTTCATTGACGAGAAGAATAAGGTCGTTGTGGTTCTGGATAAAGACGA-AG-AGACG 753
Query 1428 -AATGTCACCTTCCCGCTCGCAATATTGCTTACATCATTGGAAATAATGGA-ATCTTGAG 1485
|| ||| | || | || | ||| |||||||| | ||||| || || |
Sbjct 754 GAA----ACC--C--GCAA-CT-TAGT--TTATTTCATTGGAGAGGATGGATAT-TTCAA 800
Query 1486 TA-AAGTGGATCTTGGCGAATCTAGAGACAAGTTTTGTTAC-CCACTTGTGTGCTCTTAT 1543
| ||||||| || || |||||||||| ||| | ||| | ||| ||||| ||||||||
Sbjct 801 -AGAAGTGGAACTGGGAGAATCTAGAGGCAAAAATGGTT-CTCCATTTGTGAGCTCTTAT 858
Query 1544 GTTCCAAGCTCAGTGCAA 1561
|||||||| |||||||||
Sbjct 859 GTTCCAAGTTCAGTGCAA 876
> Ahg342698 jgi|Araly1|342698|fgenesh1_pg.C_scaffold_3002461
Length=1110
Score = 67.6 bits (36), Expect = 3e-10
Identities = 154/205 (75%), Gaps = 31/205 (15%)
Strand=Plus/Plus
Query 1365 GGAGTTTCTTCGTTGACGAGGAGAAGAAGGTCGCGGTTGTTCTTGATAAAGAGATAATAG 1424
||||||||||| |||||||||||||||| ||||| || ||| ||||| | | ||| |
Sbjct 920 GGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGGTTTTTGAT--A-A-ATACT-- 973
Query 1425 ACAAATGTCACCTTCCCGCTCGCAATATTGCTTACATCATTGGAAAT-AATGGAAT-CTT 1482
|| || | | | || |||| || |||||||||||||| | | |||| || |||
Sbjct 974 AC-AACG--A---T--CG-GCGCAGCATAGCTTACATCATTGG-AGTGGATGG-ATCCTT 1022
Query 1483 GAGTAA--AGTGGATCTTGGCGAATCTAG-AGA--CAAGTTTTGTTACCCACTTGTGTGC 1537
| || ||||||||| || ||||| | | | ||| | ||||||||||||||||||
Sbjct 1023 CA--AAGCAGTGGATCTCGGAGAATC-GGCATACGCAA--TGTGTTACCCACTTGTGTGC 1077
Query 1538 TCTTATGTTCCAAGC-TCAGTGCAA 1561
|||||||||||||| | |||||||
Sbjct 1078 TCTTATGTTCCAAGTAT-AGTGCAA 1101
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 64410604295
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5